>NOP56_MOUSE (Q9D6Z1) Nucleolar protein Nop56 (Nucleolar protein 5A)|
          Length = 580

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -1

Query: 574 REQVEERLDFYDKGVAPRKNLDVMKAAI 491
           REQVEERL FY+ G  PRKNLDVMK A+
Sbjct: 398 REQVEERLSFYETGEIPRKNLDVMKEAV 425

>NOP56_PONPY (Q5RA29) Nucleolar protein Nop56 (Nucleolar protein 5A)|
          Length = 594

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -1

Query: 574 REQVEERLDFYDKGVAPRKNLDVMKAAI 491
           REQVEERL FY+ G  PRKNLDVMK A+
Sbjct: 398 REQVEERLSFYETGEIPRKNLDVMKEAM 425

>NOP56_MACFA (Q95K50) Nucleolar protein Nop56 (Nucleolar protein 5A)|
          Length = 594

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -1

Query: 574 REQVEERLDFYDKGVAPRKNLDVMKAAI 491
           REQVEERL FY+ G  PRKNLDVMK A+
Sbjct: 398 REQVEERLSFYETGEIPRKNLDVMKEAM 425

>NOP56_HUMAN (O00567) Nucleolar protein Nop56 (Nucleolar protein 5A)|
          Length = 594

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -1

Query: 574 REQVEERLDFYDKGVAPRKNLDVMKAAI 491
           REQVEERL FY+ G  PRKNLDVMK A+
Sbjct: 398 REQVEERLSFYETGEIPRKNLDVMKEAM 425

>YZVL_CAEEL (Q21276) Hypothetical protein K07C5.4 in chromosome V|
          Length = 486

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = -1

Query: 574 REQVEERLDFYDKGVAPRKNLDVMKAAIDGLTNTEDDDGKENGDASVXXXXXXXXKAEAN 395
           R+QVE+RL+++  G  P+KN+DVMK A +     ++   K+   A+            A 
Sbjct: 404 RQQVEDRLEYFTSGTVPKKNIDVMKEAEEAAVEVKEKVIKKKKKAAKKAKRLAEESVTAT 463

Query: 394 GDA 386
            +A
Sbjct: 464 AEA 466

>DDX25_MOUSE (Q9QY15) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box|
           protein 25) (Gonadotropin-regulated testicular RNA
           helicase)
          Length = 484

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
 Frame = -1

Query: 559 ERLD-FYDKGVAPRKNLDVMKAA----IDGLTNTEDDDGKEN 449
           ERL+  +   V PRKNL  +++     IDG  NTEDDD  E+
Sbjct: 16  ERLNSHFSNLVHPRKNLRGIRSTTVPNIDGSLNTEDDDDDED 57


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,445,905
Number of Sequences: 219361
Number of extensions: 573300
Number of successful extensions: 1533
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)