>gb|AC124150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0001I22, complete sequence
          Length = 162413

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 431   atgtcatagtattcatgttcataatgccttgtgtccctccaaaactg 477
             ||||||||||| ||||||| |||||  | ||| ||||||||||||||
Sbjct: 20207 atgtcatagtactcatgtttataatatcgtgtatccctccaaaactg 20253

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 431      atgtcatagtattcatgttcataatgccttgtgtccctccaaaactg 477
                ||||||||||| ||||||| |||||  | ||| ||||||||||||||
Sbjct: 18093550 atgtcatagtactcatgtttataatatcgtgtatccctccaaaactg 18093596

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 431      atgtcatagtattcatgttcataatgccttgtgtccctccaaaactg 477
                ||||||||||| ||||||| |||||  | ||| ||||||||||||||
Sbjct: 18184950 atgtcatagtactcatgtttataatatcgtgtatccctccaaaactg 18184996

>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 499     ctcatttgcataaccaaccat 519
               |||||||||||||||||||||
Sbjct: 1531490 ctcatttgcataaccaaccat 1531510

>emb|Z24754.1|VPMCOADCA V.parvula methylmalonyl-CoA decarboxylase gene, complete CDS
          Length = 4680

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 123 tgaaaatacaaatgcatctgg 143
           |||||||||||||||||||||
Sbjct: 855 tgaaaatacaaatgcatctgg 875

>gb|L22208.1|VEIMCDC Veillonella parvula methylmalonyl-CoA decarboxylase alpha, beta,
           delta, epsilon, gamma subunits gene, complete cds
          Length = 4680

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 123 tgaaaatacaaatgcatctgg 143
           |||||||||||||||||||||
Sbjct: 855 tgaaaatacaaatgcatctgg 875

>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 457     ccttgtgtccctccaaaact 476
               ||||||||||||||||||||
Sbjct: 1187035 ccttgtgtccctccaaaact 1187016

>ref|XM_569618.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNC03790) partial mRNA
          Length = 1931

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 ccttgtgtccctccaaaact 476
           ||||||||||||||||||||
Sbjct: 921 ccttgtgtccctccaaaact 940

>emb|CR847570.9| Zebrafish DNA sequence from clone DKEY-29M9 in linkage group 3, complete
              sequence
          Length = 124104

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 497    gcctcatttgcataaccaac 516
              ||||||||||||||||||||
Sbjct: 105330 gcctcatttgcataaccaac 105311

>emb|BX957298.9| Zebrafish DNA sequence from clone CH211-268H1 in linkage group 21,
              complete sequence
          Length = 140969

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    ataactctgaaaatacaaat 135
              ||||||||||||||||||||
Sbjct: 137360 ataactctgaaaatacaaat 137379

>gb|AF016420.1| Caenorhabditis elegans cosmid C13D9, complete sequence
          Length = 43487

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 471   aaaactgctcaatattttca 490
             ||||||||||||||||||||
Sbjct: 21527 aaaactgctcaatattttca 21546

>gb|AC144617.10| Medicago truncatula clone mth2-7m9, complete sequence
          Length = 122853

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 440   tattcatgttcataatgcct 459
             ||||||||||||||||||||
Sbjct: 79052 tattcatgttcataatgcct 79071

>gb|AC114878.2| Homo sapiens chromosome 1 clone RP11-272L13, complete sequence
          Length = 194999

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   agctattagctgctcattca 202
             ||||||||||||||||||||
Sbjct: 54294 agctattagctgctcattca 54313

>emb|BX769175.12| Zebrafish DNA sequence from clone DKEY-229K5 in linkage group 3,
             complete sequence
          Length = 154794

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 497   gcctcatttgcataaccaac 516
             ||||||||||||||||||||
Sbjct: 73308 gcctcatttgcataaccaac 73289

>emb|AJ421478.1| Mus musculus X-inactivation center region; segment 1/3
          Length = 247850

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 526   cgcatcatcacacatatcat 545
             ||||||||||||||||||||
Sbjct: 31154 cgcatcatcacacatatcat 31135

>gb|AC112506.5| Homo sapiens 3 BAC RP11-286P15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 115279

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 468   tccaaaactgctcaatattt 487
             ||||||||||||||||||||
Sbjct: 97478 tccaaaactgctcaatattt 97497

>gb|AC019153.13| Mus musculus chromosome 2 clone RP23-286D16, complete sequence
          Length = 195068

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 567   taagatccattattccttgg 586
             ||||||||||||||||||||
Sbjct: 18052 taagatccattattccttgg 18033

>gb|AC104246.3| Homo sapiens chromosome 8, clone RP11-1073L1, complete sequence
          Length = 170284

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 188    ttagctgctcattcaccaaaacaa 211
              |||||||||| |||||||||||||
Sbjct: 143030 ttagctgctctttcaccaaaacaa 143007

>gb|AC046174.6| Homo sapiens chromosome 8, clone RP11-621B3, complete sequence
          Length = 161619

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 188   ttagctgctcattcaccaaaacaa 211
             |||||||||| |||||||||||||
Sbjct: 31410 ttagctgctctttcaccaaaacaa 31387

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 438     agtattcatgttcataatgc 457
               ||||||||||||||||||||
Sbjct: 6522244 agtattcatgttcataatgc 6522225

>gb|AC084573.1|CBRG39L12 Caenorhabditis briggsae cosmid G39L12, complete sequence
          Length = 41040

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 587   attgcataacatccatcaaa 606
             ||||||||||||||||||||
Sbjct: 10216 attgcataacatccatcaaa 10235

>gb|AC010880.8| Homo sapiens BAC clone RP11-282G6 from 2, complete sequence
          Length = 115431

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 454   atgccttgtgtccctccaaa 473
             ||||||||||||||||||||
Sbjct: 55977 atgccttgtgtccctccaaa 55958

>dbj|AK180957.1| Mus musculus cDNA, clone:Y0G0116H09, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000020766, based on BLAT search
          Length = 445

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 gtcatagtattcatgttcat 452
           ||||||||||||||||||||
Sbjct: 331 gtcatagtattcatgttcat 312

>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0690H04
          Length = 137319

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 438   agtattcatgttcataatgc 457
             ||||||||||||||||||||
Sbjct: 38620 agtattcatgttcataatgc 38601

>emb|BX571766.3| Mouse DNA sequence from clone RP23-366O12 on chromosome 2, complete
             sequence
          Length = 36405

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 567   taagatccattattccttgg 586
             ||||||||||||||||||||
Sbjct: 19502 taagatccattattccttgg 19521

>gb|AC154408.2| Mus musculus BAC clone RP24-259A5 from 16, complete sequence
          Length = 158312

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 531   catcacacatatcatccttc 550
             ||||||||||||||||||||
Sbjct: 59149 catcacacatatcatccttc 59130

>emb|AL671187.9| Mouse DNA sequence from clone RP23-273N4 on chromosome X, complete
              sequence
          Length = 205749

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 526    cgcatcatcacacatatcat 545
              ||||||||||||||||||||
Sbjct: 139742 cgcatcatcacacatatcat 139761

>emb|AL845286.8| Mouse DNA sequence from clone RP23-328F20 on chromosome 2, complete
              sequence
          Length = 195593

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 561    attttttaagatccattatt 580
              ||||||||||||||||||||
Sbjct: 167285 attttttaagatccattatt 167304


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,151,710
Number of Sequences: 3902068
Number of extensions: 6151710
Number of successful extensions: 121467
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121290
Number of HSP's gapped (non-prelim): 177
length of query: 656
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 633
effective length of database: 17,143,297,704
effective search space: 10851707446632
effective search space used: 10851707446632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)