>ATP5E_MAIZE (Q41898) ATP synthase epsilon chain, mitochondrial (EC 3.6.3.14)|
          Length = 70

 Score = 90.5 bits (223), Expect(2) = 4e-22
 Identities = 39/50 (78%), Positives = 47/50 (94%)
 Frame = -1

Query: 407 GYSNVCAALVRSCLKEPFKTELSSREKVHFSLSKWTDEKQQKPTVRTDEE 258
           GYSN+CAALVR+CLKEPFK+E +SREKVHFS+SKWTD KQ+KPTVRT+ +
Sbjct: 20  GYSNICAALVRNCLKEPFKSEAASREKVHFSISKWTDGKQEKPTVRTESD 69



 Score = 33.1 bits (74), Expect(2) = 4e-22
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -3

Query: 444 VPFWRAAGMTYIG 406
           VPFWRAAGMTYIG
Sbjct: 8   VPFWRAAGMTYIG 20

>ATP5E_IPOBA (Q06450) ATP synthase epsilon chain, mitochondrial (EC 3.6.3.14)|
          Length = 69

 Score = 73.6 bits (179), Expect(2) = 2e-16
 Identities = 31/47 (65%), Positives = 38/47 (80%)
 Frame = -1

Query: 404 YSNVCAALVRSCLKEPFKTELSSREKVHFSLSKWTDEKQQKPTVRTD 264
           YSN+CA +VR+CLKEP++ E  SREKVHFS SKW D K QKP +R+D
Sbjct: 19  YSNLCANMVRNCLKEPYRAEALSREKVHFSFSKWVDGKPQKPAIRSD 65



 Score = 30.8 bits (68), Expect(2) = 2e-16
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 444 VPFWRAAGMTYI 409
           VPFWRAAGMTYI
Sbjct: 6   VPFWRAAGMTYI 17

>ATP5E_ARATH (Q96253) ATP synthase epsilon chain, mitochondrial (EC 3.6.3.14)|
          Length = 69

 Score = 73.6 bits (179), Expect(2) = 2e-16
 Identities = 32/47 (68%), Positives = 38/47 (80%)
 Frame = -1

Query: 404 YSNVCAALVRSCLKEPFKTELSSREKVHFSLSKWTDEKQQKPTVRTD 264
           YSN+CA +VR+CLKEP K E  +REKVHFSLSKW D K QKP +R+D
Sbjct: 19  YSNICANIVRNCLKEPHKAEALTREKVHFSLSKWADGKPQKPVLRSD 65



 Score = 30.8 bits (68), Expect(2) = 2e-16
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 444 VPFWRAAGMTYI 409
           VPFWRAAGMTYI
Sbjct: 6   VPFWRAAGMTYI 17

>ATP5E_SCHPO (P87316) Putative ATP synthase epsilon chain, mitochondrial (EC|
           3.6.3.14)
          Length = 67

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 410 SGYSNVCAALVRSCLKEPFKTELSSREKVHFSLSKWTDEKQQK 282
           S Y+++C+  VR  LK   K E+ +     F  ++W +  Q+K
Sbjct: 12  SKYASICSQTVRQALKPEIKNEVKTHGDAEFLYTRWKNGAQEK 54

>MARK4_MOUSE (Q8CIP4) MAP/microtubule affinity-regulating kinase 4 (EC 2.7.11.1)|
          Length = 752

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +3

Query: 105 VSHGSSSRKGAISKYNNIVSE*IHCHRTNLFLRPDHKSTN 224
           VSHG    K A +K+  IVS   +CH+ N+  R D K+ N
Sbjct: 148 VSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHR-DLKAEN 186

>MARK4_HUMAN (Q96L34) MAP/microtubule affinity-regulating kinase 4 (EC 2.7.11.1)|
           (MAP/microtubule affinity-regulating kinase-like 1)
          Length = 752

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +3

Query: 105 VSHGSSSRKGAISKYNNIVSE*IHCHRTNLFLRPDHKSTN 224
           VSHG    K A +K+  IVS   +CH+ N+  R D K+ N
Sbjct: 148 VSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHR-DLKAEN 186

>SYN_RHOBA (Q7UHE1) Asparaginyl-tRNA synthetase (EC 6.1.1.22)|
           (Asparagine--tRNA ligase) (AsnRS)
          Length = 490

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 15/58 (25%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
 Frame = +1

Query: 250 DLHSSSVRTVGFCCFSSVHLEREK--------WTFSREESSVLKGSLRQLRTSAAQTL 399
           +LH+SSVR +G+C   +  L++++        W+  R  ++ L G++ ++R   +Q++
Sbjct: 118 ELHASSVRVIGWCDGETYPLQKKRHSFEKLREWSHLRARTNTL-GAVMRVRNRISQSI 174


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,147,035
Number of Sequences: 219361
Number of extensions: 787342
Number of successful extensions: 2043
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2043
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)