>CT024_MOUSE (Q9CQT9) Protein C20orf24 homolog|
          Length = 129

 Score = 92.0 bits (227), Expect = 9e-19
 Identities = 38/92 (41%), Positives = 61/92 (66%)
 Frame = -2

Query: 503 DKDQLLDAVHWIRQAVGLACGLLWGAVPLVGAFWIALFFTISTVIVHLYYAHLLKIDEED 324
           DKD+ LD ++W RQ + L  G++WG +PL G   IA F  I+  +++LY+++ L+IDEE+
Sbjct: 37  DKDEFLDVIYWFRQIIALVLGVIWGVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEE 96

Query: 323 FGGHAALLQEGLFASFTLFLLSWTLVYSLAHF 228
           +GG   L +EG   SF LF++ W + Y+  H+
Sbjct: 97  YGGTWELTKEGFMTSFALFMVIWIIFYTAIHY 128

>CT024_HUMAN (Q9BUV8) Protein C20orf24 (Rab5-interacting protein) (RIP5)|
          Length = 137

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 35/91 (38%), Positives = 58/91 (63%)
 Frame = -2

Query: 503 DKDQLLDAVHWIRQAVGLACGLLWGAVPLVGAFWIALFFTISTVIVHLYYAHLLKIDEED 324
           DKD+ LD ++W RQ + +  G++WG +PL G   IA F  I+  +++LY+++ L+IDEE+
Sbjct: 37  DKDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEE 96

Query: 323 FGGHAALLQEGLFASFTLFLLSWTLVYSLAH 231
           +GG   L +EG   SF LF++     ++  H
Sbjct: 97  YGGTWELTKEGFMTSFALFMVCVADSFTTGH 127

>NDC1_DROPS (Q298S5) Nucleoporin Ndc1|
          Length = 579

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -2

Query: 494 QLLDAVHWIRQAVGLACGLL--WGAVPLVGA 408
           QLL  +HWI   + L C +   + ++PLVGA
Sbjct: 43  QLLRPLHWISVTLSLVCSMYTWFASIPLVGA 73


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,283,317
Number of Sequences: 219361
Number of extensions: 1236952
Number of successful extensions: 2982
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2980
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)