ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 192 1e-45
2dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic D... 192 1e-45
3dbj|AK102835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 1e-45
4gb|AY107126.1| Zea mays PCO066908 mRNA sequence 107 5e-20
5gb|BT018704.1| Zea mays clone EL01N0515D08.d mRNA sequence 101 3e-18
6gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 46 0.15
7ref|XM_761550.1| Theileria parva strain Muguga chromosome 1 cell... 44 0.61
8gb|AC155166.4| Mus musculus BAC clone RP24-69M8 from chromosome ... 42 2.4
9emb|AL808108.3| Zebrafish DNA sequence from clone CH211-240L14 i... 42 2.4
10gb|AF409102.1| Trichoplusia ni 3-dehydrecdysone 3b-reductase mRN... 42 2.4
11dbj|AB158498.1| Bombyx mori gene for trehalase, 5' upstream region 42 2.4
12emb|BX322614.3| Zebrafish DNA sequence from clone CH211-215G1 in... 42 2.4
13gb|AC133497.4| Mus musculus BAC clone RP24-390A22 from 8, comple... 42 2.4
14gb|DQ141103.1| Bombyx mori Dscam gene, partial sequence 40 9.5
15gb|AC084196.1| Caenorhabditis elegans cosmid Y55D5A, complete se... 40 9.5
16emb|CR354401.17| Zebrafish DNA sequence from clone CH211-101C7 i... 40 9.5
17emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genom... 40 9.5
18gb|AF494090.1| Nicotiana sylvestris gibberellin 3-oxidase 2 (GA3... 40 9.5
19gb|AC021517.9| Homo sapiens chromosome 18, clone RP11-309E23, co... 40 9.5
20gb|DQ311393.1| Bombyx mori Prpk-binding protein mRNA, complete cds 40 9.5
21gb|AF303741.1|AF303741 Chilo iridescent virus complete genome 40 9.5
22gb|AC010902.4|AC010902 Homo sapiens clone RP11-549J7, complete s... 40 9.5
23gb|AC010146.13| Homo sapiens BAC clone RP11-355I13 from 2, compl... 40 9.5
24gb|AF226688.1|AF226688 Bombyx mori fibroin heavy chain Fib-H (fi... 40 9.5
25emb|BX005106.5| Zebrafish DNA sequence from clone DKEY-188I13, c... 40 9.5
26gb|U07847.1|BMAMYNLTRR Bombyx mori truncated alpha-amylase (amy)... 40 9.5
27dbj|AB159447.1| Bombyx mori DNA, chromosome 13, clone:534E24, co... 40 9.5
28dbj|AB002270.1| Bombyx mori L1Bm DNA, non-LTR retrotransposon 40 9.5
29emb|AL732544.12| Zebrafish DNA sequence from clone BUSM1-6I1 in ... 40 9.5
30emb|CT009654.2| Medicago truncatula chromosome 5 clone mth2-17c1... 40 9.5
31dbj|AB090307.1| Bombyx mori Bmfkbp13, Bmhepa, Bmhig, Bm6922, Bml... 40 9.5
32dbj|AB079861.1| Bombyx mori Bmhig gene for hypothetical protein,... 40 9.5
33dbj|AP003421.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.5
34emb|AL928803.6| Mouse DNA sequence from clone RP23-319N14 on chr... 40 9.5
35gb|AY353886.1| Rabies virus isolate 2072f glycoprotein (G) mRNA,... 40 9.5
36emb|AL845478.6| Mouse DNA sequence from clone RP23-186J18 on chr... 40 9.5
37gb|DQ243319.1| Bombyx mori chromosome 05 microsatellite S0514-R ... 40 9.5
38gb|DQ243067.1| Bombyx mori chromosome 11 microsatellite S1128-F ... 40 9.5
39gb|DQ242762.1| Bombyx mori chromosome 12 microsatellite S1207-F ... 40 9.5
40dbj|AB032198.1| Nicotiana tabacum mRNA for gibberellin 3beta-hyd... 40 9.5 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  192 bits (97), Expect = 1e-45
 Identities = 248/297 (83%), Gaps = 1/297 (0%)
 Strand = Plus / Minus

                                                                            
Query: 371      cccatggcaaccactgggatcctgactaggtggcgccggtcacccttcatcgtgatctcg 430
                ||||| || ||||||||||| || || ||||| |  ||||| || ||||| |||||||| 
Sbjct: 28924918 cccatagctaccactgggattctcacaaggtgacctcggtcccctttcatggtgatctct 28924859

                                                                            
Query: 431      ccgaaactgtaggtaccggtcaccgtcctcgtcgtgagggtcacggtgatctctctagat 490
                || ||||||||||| || ||||| | ||| | |||||||||| | || |||||||| |||
Sbjct: 28924858 ccaaaactgtaggtgccagtcactgacctggccgtgagggtcgccgttatctctctcgat 28924799

                                                                            
Query: 491      gacccagggagcaccgtcagcgcgggaggtgagacgtccagcgcgatctccggcgacatc 550
                |  || |||||||| |||||||| ||||||||||| ||||||||||||||||||||||| 
Sbjct: 28924798 gcgccggggagcactgtcagcgctggaggtgagacctccagcgcgatctccggcgacatt 28924739

                                                                            
Query: 551      ctggtcatgatggtgtaggtttctgcctcatcagccacgttcgtgactgtccgcttcacg 610
                || |||||||||||||||||||| |||||  | |||||| | || |||||||||||||| 
Sbjct: 28924738 cttgtcatgatggtgtaggtttcggcctcggcggccacgcttgtaactgtccgcttcacc 28924679

                                                                         
Query: 611      gtctgcgtccctttgagctgtgacaccgtgatcgagggggatgttcagatcataggg 667
                |||||||| ||| | ||||| || |  ||||| || ||||||||| |||||||||||
Sbjct: 28924678 gtctgcgtgcctctaagctgggagatggtgattga-ggggatgttgagatcataggg 28924623
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>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0468G03
          Length = 143918

 Score =  192 bits (97), Expect = 1e-45
 Identities = 248/297 (83%), Gaps = 1/297 (0%)
 Strand = Plus / Minus

                                                                         
Query: 371   cccatggcaaccactgggatcctgactaggtggcgccggtcacccttcatcgtgatctcg 430
             ||||| || ||||||||||| || || ||||| |  ||||| || ||||| |||||||| 
Sbjct: 74962 cccatagctaccactgggattctcacaaggtgacctcggtcccctttcatggtgatctct 74903

                                                                         
Query: 431   ccgaaactgtaggtaccggtcaccgtcctcgtcgtgagggtcacggtgatctctctagat 490
             || ||||||||||| || ||||| | ||| | |||||||||| | || |||||||| |||
Sbjct: 74902 ccaaaactgtaggtgccagtcactgacctggccgtgagggtcgccgttatctctctcgat 74843

                                                                         
Query: 491   gacccagggagcaccgtcagcgcgggaggtgagacgtccagcgcgatctccggcgacatc 550
             |  || |||||||| |||||||| ||||||||||| ||||||||||||||||||||||| 
Sbjct: 74842 gcgccggggagcactgtcagcgctggaggtgagacctccagcgcgatctccggcgacatt 74783

                                                                         
Query: 551   ctggtcatgatggtgtaggtttctgcctcatcagccacgttcgtgactgtccgcttcacg 610
             || |||||||||||||||||||| |||||  | |||||| | || |||||||||||||| 
Sbjct: 74782 cttgtcatgatggtgtaggtttcggcctcggcggccacgcttgtaactgtccgcttcacc 74723

                                                                      
Query: 611   gtctgcgtccctttgagctgtgacaccgtgatcgagggggatgttcagatcataggg 667
             |||||||| ||| | ||||| || |  ||||| || ||||||||| |||||||||||
Sbjct: 74722 gtctgcgtgcctctaagctgggagatggtgattga-ggggatgttgagatcataggg 74667
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>dbj|AK102835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109K01, full
            insert sequence
          Length = 2984

 Score =  192 bits (97), Expect = 1e-45
 Identities = 248/297 (83%), Gaps = 1/297 (0%)
 Strand = Plus / Minus

                                                                        
Query: 371  cccatggcaaccactgggatcctgactaggtggcgccggtcacccttcatcgtgatctcg 430
            ||||| || ||||||||||| || || ||||| |  ||||| || ||||| |||||||| 
Sbjct: 2766 cccatagctaccactgggattctcacaaggtgacctcggtcccctttcatggtgatctct 2707

                                                                        
Query: 431  ccgaaactgtaggtaccggtcaccgtcctcgtcgtgagggtcacggtgatctctctagat 490
            || ||||||||||| || ||||| | ||| | |||||||||| | || |||||||| |||
Sbjct: 2706 ccaaaactgtaggtgccagtcactgacctggccgtgagggtcgccgttatctctctcgat 2647

                                                                        
Query: 491  gacccagggagcaccgtcagcgcgggaggtgagacgtccagcgcgatctccggcgacatc 550
            |  || |||||||| |||||||| ||||||||||| ||||||||||||||||||||||| 
Sbjct: 2646 gcgccggggagcactgtcagcgctggaggtgagacctccagcgcgatctccggcgacatt 2587

                                                                        
Query: 551  ctggtcatgatggtgtaggtttctgcctcatcagccacgttcgtgactgtccgcttcacg 610
            || |||||||||||||||||||| |||||  | |||||| | || |||||||||||||| 
Sbjct: 2586 cttgtcatgatggtgtaggtttcggcctcggcggccacgcttgtaactgtccgcttcacc 2527

                                                                     
Query: 611  gtctgcgtccctttgagctgtgacaccgtgatcgagggggatgttcagatcataggg 667
            |||||||| ||| | ||||| || |  ||||| || ||||||||| |||||||||||
Sbjct: 2526 gtctgcgtgcctctaagctgggagatggtgattga-ggggatgttgagatcataggg 2471
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>gb|AY107126.1| Zea mays PCO066908 mRNA sequence
          Length = 829

 Score =  107 bits (54), Expect = 5e-20
 Identities = 201/250 (80%)
 Strand = Plus / Minus

                                                                       
Query: 360 cctatttgaaccccatggcaaccactgggatcctgactaggtggcgccggtcacccttca 419
           |||| ||||| ||||| || || |||||||| ||||| ||||| |  |||||||| ||||
Sbjct: 816 cctacttgaatcccatagctacgactgggattctgacgaggtgaccgcggtcacctttca 757

                                                                       
Query: 420 tcgtgatctcgccgaaactgtaggtaccggtcaccgtcctcgtcgtgagggtcacggtga 479
           | |  ||||| |||||||||||||| |||||||| | ||||| ||| |||||||| || |
Sbjct: 756 tggcaatctcaccgaaactgtaggtgccggtcacggacctcgccgtcagggtcacagtta 697

                                                                       
Query: 480 tctctctagatgacccagggagcaccgtcagcgcgggaggtgagacgtccagcgcgatct 539
           ||||||  ||||  || |||| ||| |||| ||| ||||| |  || ||||| |||| ||
Sbjct: 696 tctctcgtgatgctccggggaccacggtcaccgccggaggcgtcacctccagggcgacct 637

                                                                       
Query: 540 ccggcgacatcctggtcatgatggtgtaggtttctgcctcatcagccacgttcgtgactg 599
           | |||| |||||| ||||||||||||||||| || |  || || | |||| ||||||| |
Sbjct: 636 ctggcggcatccttgtcatgatggtgtaggtctcggtttcgtcggacacgctcgtgacgg 577

                     
Query: 600 tccgcttcac 609
           ||||||||||
Sbjct: 576 tccgcttcac 567
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>gb|BT018704.1| Zea mays clone EL01N0515D08.d mRNA sequence
          Length = 1950

 Score =  101 bits (51), Expect = 3e-18
 Identities = 171/211 (81%)
 Strand = Plus / Minus

                                                                        
Query: 360  cctatttgaaccccatggcaaccactgggatcctgactaggtggcgccggtcacccttca 419
            |||| ||||| ||||| || ||||||||||| ||||| | |||||  ||||| || ||||
Sbjct: 1689 cctacttgaatcccatagctaccactgggattctgacgatgtggccgcggtcgcctttca 1630

                                                                        
Query: 420  tcgtgatctcgccgaaactgtaggtaccggtcaccgtcctcgtcgtgagggtcacggtga 479
            | | |||||| |||||||||||||| |||||||| | ||||| ||| |||||||| |  |
Sbjct: 1629 tggcgatctctccgaaactgtaggtgccggtcacggacctcgccgtcagggtcacagcta 1570

                                                                        
Query: 480  tctctctagatgacccagggagcaccgtcagcgcgggaggtgagacgtccagcgcgatct 539
             |||||| ||||  || || |||||||||| ||| ||||| |  || ||||| || | ||
Sbjct: 1569 cctctctcgatgctccgggcagcaccgtcaccgccggaggcgtcacctccagggcaacct 1510

                                           
Query: 540  ccggcgacatcctggtcatgatggtgtaggt 570
            |||||| ||| || |||||||||||||||||
Sbjct: 1509 ccggcggcattctcgtcatgatggtgtaggt 1479
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 532     cgcgatctccggcgacatcctgg 554
               |||||||||||||||||||||||
Sbjct: 2624361 cgcgatctccggcgacatcctgg 2624339
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>ref|XM_761550.1| Theileria parva strain Muguga chromosome 1 cell division protein
           FtsH (TP01_1122) partial mRNA
          Length = 2421

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 654 ttcagatcatagggtccctgtc 675
           ||||||||||||||||||||||
Sbjct: 12  ttcagatcatagggtccctgtc 33
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>gb|AC155166.4| Mus musculus BAC clone RP24-69M8 from chromosome 8, complete sequence
          Length = 212711

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 97    caagcgaaggtgcagagatgc 117
             |||||||||||||||||||||
Sbjct: 76936 caagcgaaggtgcagagatgc 76956
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>emb|AL808108.3| Zebrafish DNA sequence from clone CH211-240L14 in linkage group 14
             Contains two novel genes, a novel gene similar to human
             GRHPR (glyoxylate reductase/hydroxypyruvate reductase), a
             novel gene similar to human C4orf1 (chromosome 4 open
             reading frame 1) and three CpG islands, complete sequence
          Length = 170556

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 188   ccatgtcatataaataggctacaga 212
             |||||||||||| ||||||||||||
Sbjct: 13724 ccatgtcatatacataggctacaga 13748
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>gb|AF409102.1| Trichoplusia ni 3-dehydrecdysone 3b-reductase mRNA, complete cds
          Length = 1055

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 585 ccacgttcgtgactgtccgct 605
           |||||||||||||||||||||
Sbjct: 651 ccacgttcgtgactgtccgct 631
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>dbj|AB158498.1| Bombyx mori gene for trehalase, 5' upstream region
          Length = 5005

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 440 taggtaccggtcaccgtcctcgtcg 464
           |||| ||||||||||||||||||||
Sbjct: 316 taggcaccggtcaccgtcctcgtcg 292
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>emb|BX322614.3| Zebrafish DNA sequence from clone CH211-215G1 in linkage group 16,
              complete sequence
          Length = 199783

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 111    gagatgccagactcagactga 131
              |||||||||||||||||||||
Sbjct: 169039 gagatgccagactcagactga 169019
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>gb|AC133497.4| Mus musculus BAC clone RP24-390A22 from 8, complete sequence
          Length = 158740

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 97     caagcgaaggtgcagagatgc 117
              |||||||||||||||||||||
Sbjct: 117723 caagcgaaggtgcagagatgc 117743
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>gb|DQ141103.1| Bombyx mori Dscam gene, partial sequence
          Length = 57601

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 445   accggtcaccgtcctcgtcg 464
             ||||||||||||||||||||
Sbjct: 35496 accggtcaccgtcctcgtcg 35477
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>gb|AC084196.1| Caenorhabditis elegans cosmid Y55D5A, complete sequence
          Length = 86523

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   ttcctaccaaactacaaaat 311
             ||||||||||||||||||||
Sbjct: 64582 ttcctaccaaactacaaaat 64563
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>emb|CR354401.17| Zebrafish DNA sequence from clone CH211-101C7 in linkage group 12,
              complete sequence
          Length = 168372

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 298    ccaaactacaaaatattaca 317
              ||||||||||||||||||||
Sbjct: 127710 ccaaactacaaaatattaca 127729
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>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16
          Length = 348942

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 532   cgcgatctccggcgacatcc 551
             ||||||||||||||||||||
Sbjct: 44591 cgcgatctccggcgacatcc 44572
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>gb|AF494090.1| Nicotiana sylvestris gibberellin 3-oxidase 2 (GA3ox2) mRNA, complete
            cds
          Length = 1285

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 194  catataaataggctacagaa 213
            ||||||||||||||||||||
Sbjct: 1036 catataaataggctacagaa 1017
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>gb|AC021517.9| Homo sapiens chromosome 18, clone RP11-309E23, complete sequence
          Length = 160904

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 645   agggggatgttcagatcatagggt 668
             ||||||||||||||| ||||||||
Sbjct: 91772 agggggatgttcagaccatagggt 91795
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>gb|DQ311393.1| Bombyx mori Prpk-binding protein mRNA, complete cds
          Length = 1264

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 445 accggtcaccgtcctcgtcg 464
           ||||||||||||||||||||
Sbjct: 922 accggtcaccgtcctcgtcg 903
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>gb|AF303741.1|AF303741 Chilo iridescent virus complete genome
          Length = 212482

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   cgtatttttacatcctgggg 238
             ||||||||||||||||||||
Sbjct: 53023 cgtatttttacatcctgggg 53004
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>gb|AC010902.4|AC010902 Homo sapiens clone RP11-549J7, complete sequence
          Length = 114169

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   tacaaaatattacaacactc 323
             ||||||||||||||||||||
Sbjct: 54250 tacaaaatattacaacactc 54231
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>gb|AC010146.13| Homo sapiens BAC clone RP11-355I13 from 2, complete sequence
          Length = 211748

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 646    gggggatgttcagatcatag 665
              ||||||||||||||||||||
Sbjct: 147800 gggggatgttcagatcatag 147781
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>gb|AF226688.1|AF226688 Bombyx mori fibroin heavy chain Fib-H (fib-H) gene, complete cds
          Length = 80009

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 445   accggtcaccgtcctcgtcg 464
             ||||||||||||||||||||
Sbjct: 30424 accggtcaccgtcctcgtcg 30405
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>emb|BX005106.5| Zebrafish DNA sequence from clone DKEY-188I13, complete sequence
          Length = 216863

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    aacacagacaatacatcatt 267
              ||||||||||||||||||||
Sbjct: 185928 aacacagacaatacatcatt 185947
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>gb|U07847.1|BMAMYNLTRR Bombyx mori truncated alpha-amylase (amy) gene, complete cds; and
            retrotransposon reverse transcriptase gene, complete cds
          Length = 8970

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 445  accggtcaccgtcctcgtcg 464
            ||||||||||||||||||||
Sbjct: 8589 accggtcaccgtcctcgtcg 8608
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>dbj|AB159447.1| Bombyx mori DNA, chromosome 13, clone:534E24, complete sequence
          Length = 124898

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 445   accggtcaccgtcctcgtcg 464
             ||||||||||||||||||||
Sbjct: 66365 accggtcaccgtcctcgtcg 66346



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 445   accggtcaccgtcctcgtcg 464
             ||||||||||||||||||||
Sbjct: 41972 accggtcaccgtcctcgtcg 41953



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 445   accggtcaccgtcctcgtcg 464
             ||||||||||||||||||||
Sbjct: 26355 accggtcaccgtcctcgtcg 26374
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>dbj|AB002270.1| Bombyx mori L1Bm DNA, non-LTR retrotransposon
          Length = 5636

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 445 accggtcaccgtcctcgtcg 464
           ||||||||||||||||||||
Sbjct: 363 accggtcaccgtcctcgtcg 344
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>emb|AL732544.12| Zebrafish DNA sequence from clone BUSM1-6I1 in linkage group 7,
             complete sequence
          Length = 135141

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 333   gagcatcataagagaacaatacac 356
             ||||||||||||||||| ||||||
Sbjct: 90668 gagcatcataagagaactatacac 90645
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>emb|CT009654.2| Medicago truncatula chromosome 5 clone mth2-17c15, COMPLETE SEQUENCE
          Length = 126536

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   cataagagaacaatacacga 358
             ||||||||||||||||||||
Sbjct: 59331 cataagagaacaatacacga 59312
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>dbj|AB090307.1| Bombyx mori Bmfkbp13, Bmhepa, Bmhig, Bm6922, Bmlap, Bmprojectin,
             Bmkettin, Bmtitin1 genes, partial and complete cds
          Length = 160000

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 445   accggtcaccgtcctcgtcg 464
             ||||||||||||||||||||
Sbjct: 36543 accggtcaccgtcctcgtcg 36524
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>dbj|AB079861.1| Bombyx mori Bmhig gene for hypothetical protein, complete cds
          Length = 13140

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 445  accggtcaccgtcctcgtcg 464
            ||||||||||||||||||||
Sbjct: 7923 accggtcaccgtcctcgtcg 7942
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>dbj|AP003421.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-951E24, complete
             sequence
          Length = 114999

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   atgccagactcagactgaaa 133
             ||||||||||||||||||||
Sbjct: 81171 atgccagactcagactgaaa 81190
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>emb|AL928803.6| Mouse DNA sequence from clone RP23-319N14 on chromosome 2, complete
             sequence
          Length = 109092

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   caccatcataacacagacaa 258
             ||||||||||||||||||||
Sbjct: 93861 caccatcataacacagacaa 93880
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>gb|AY353886.1| Rabies virus isolate 2072f glycoprotein (G) mRNA, partial cds
          Length = 854

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 561 tggtgtaggtttctgcctca 580
           ||||||||||||||||||||
Sbjct: 186 tggtgtaggtttctgcctca 167
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>emb|AL845478.6| Mouse DNA sequence from clone RP23-186J18 on chromosome 2, complete
             sequence
          Length = 222451

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 321   ctcctcagctcagagcatca 340
             ||||||||||||||||||||
Sbjct: 41617 ctcctcagctcagagcatca 41636
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>gb|DQ243319.1| Bombyx mori chromosome 05 microsatellite S0514-R sequence
          Length = 716

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 445 accggtcaccgtcctcgtcg 464
           ||||||||||||||||||||
Sbjct: 573 accggtcaccgtcctcgtcg 592
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>gb|DQ243067.1| Bombyx mori chromosome 11 microsatellite S1128-F sequence
          Length = 501

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 445 accggtcaccgtcctcgtcg 464
           ||||||||||||||||||||
Sbjct: 328 accggtcaccgtcctcgtcg 347
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>gb|DQ242762.1| Bombyx mori chromosome 12 microsatellite S1207-F sequence
          Length = 973

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 445 accggtcaccgtcctcgtcg 464
           ||||||||||||||||||||
Sbjct: 264 accggtcaccgtcctcgtcg 245
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>dbj|AB032198.1| Nicotiana tabacum mRNA for gibberellin 3beta-hydroxylase, complete
           cds
          Length = 1116

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 194 catataaataggctacagaa 213
           ||||||||||||||||||||
Sbjct: 913 catataaataggctacagaa 894


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,037,385
Number of Sequences: 3902068
Number of extensions: 5037385
Number of successful extensions: 91739
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91568
Number of HSP's gapped (non-prelim): 167
length of query: 693
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 670
effective length of database: 17,143,297,704
effective search space: 11486009461680
effective search space used: 11486009461680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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