| Clone Name | rbags7f24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK072591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N22, full insert sequence Length = 2346 Score = 323 bits (163), Expect = 4e-85 Identities = 381/453 (84%), Gaps = 3/453 (0%) Strand = Plus / Minus Query: 135 ctggaagggttagctccagtttcacacgaggtgccgcagaaaccatacttgtttcggatt 194 ||||||| || ||||| ||||||||||||||||| | ||||| || |||||||| |||| Sbjct: 992 ctggaagtgtaagctctggtttcacacgaggtgccaccgaaactatgcttgtttcagatt 933 Query: 195 tggtatttttccctattggacctacaagcttatcctttttgagctttttgttaagagaac 254 | | || ||||| | | ||| ||| |||||| ||||||| |||||| || ||||| Sbjct: 932 tattggttctccctgtggctcctgcaatcttatcttttttgaccttttt---aacagaac 876 Query: 255 caccctgctttccaccttctgaggatttttccttgttattatcttctgcgtctgcatcct 314 | ||||||||||||||||| || |||||| ||| || |||||||| || |||||||||| Sbjct: 875 ctccctgctttccaccttccgaagattttctcttattgttatcttcggcatctgcatcct 816 Query: 315 tgctttctgcttcagctctatcagaatctgagagtgctttctccatacgctcctcaactg 374 ||||||||||||||| | |||| || ||| | |||| ||||||||| ||||| ||||||| Sbjct: 815 tgctttctgcttcagttttatctgattctaaaagtgttttctccatgcgctcttcaactg 756 Query: 375 aatcttcaagcaacccccaatgcacttccttctgatttatctgttttgccaagtccttac 434 ||||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||| Sbjct: 755 aatcttcaagcaacccccaatgcacctccttcagatttatttgttttgccaaatccttct 696 Query: 435 tagttccaaccagagcaacaacatcggcgtcatcagagatcaatgaaggctgcccagcag 494 | |||||||| |||||||||||||| | |||||||||||| || || ||||| |||| | Sbjct: 695 ttgttccaactagagcaacaacatccgtgtcatcagagattaaagatggctgaccagggg 636 Query: 495 atacttcaaaaattatcctttcattgattattccaagcatcacaagagcttgtgttttct 554 |||| |||||| || | | |||||| ||||||||||| | |||||||||||||||||||| Sbjct: 635 atacgtcaaaagttgtgcgttcatttattattccaagaaccacaagagcttgtgttttct 576 Query: 555 agagatactggagaagtaattcatacgaatact 587 |||||||||||| ||||| ||||| ||||||| Sbjct: 575 ggagatactggaggagtaactcatatgaatact 543
>dbj|AK111572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E21, full insert sequence Length = 2638 Score = 317 bits (160), Expect = 3e-83 Identities = 353/416 (84%), Gaps = 6/416 (1%) Strand = Plus / Minus Query: 172 agaaaccatacttgtttcggatttggtatttttccctattggacctacaagcttatcctt 231 ||||||||| || ||||| ||||| | ||||||||| | | ||||||| ||| ||||| Sbjct: 1531 agaaaccatgctagtttcagatttcatgtttttccctgtggttcctacaaacttgtcctt 1472 Query: 232 tttgagctttttgttaagagaaccaccctgctttccaccttctgaggatttttccttgtt 291 ||||| |||||| | | || ||||||||||||||||||||||||||| ||| |||||| Sbjct: 1471 tttgatctttttat---gtgagccaccctgctttccaccttctgaggatcttttcttgtt 1415 Query: 292 attatcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgc 351 | |||||| ||||||||||||||||||| ||||| | ||||||||||||| | ||| Sbjct: 1414 gt---cttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgc 1358 Query: 352 tttctccatacgctcctcaactgaatcttcaagcaacccccaatgcacttccttctgatt 411 ||||||||||| || |||| |||||||||||| | |||||||||||| ||||||||||| Sbjct: 1357 cttctccatacgttcttcaagtgaatcttcaagtatcccccaatgcacctccttctgatt 1298 Query: 412 tatctgttttgccaagtccttactagttccaaccagagcaacaacatcggcgtcatcaga 471 ||||||||||| ||||||||| |||||||||| |||| ||||| |||| | ||||||| Sbjct: 1297 tatctgttttgtcaagtccttgctagttccaatcagaacaacagcatccgagtcatcaat 1238 Query: 472 gatcaatgaaggctgcccagcagatacttcaaaaattatcctttcattgattattccaag 531 ||| |||| || |||||||| ||||||| |||| ||| | |||||||||||||||||| Sbjct: 1237 gattaatggagactgcccaggggatacttgaaaatctatgcgttcattgattattccaag 1178 Query: 532 catcacaagagcttgtgttttctagagatactggagaagtaattcatacgaatact 587 || |||||||||||||||||| | ||||||||||||||| |||||||| ||||||| Sbjct: 1177 caccacaagagcttgtgttttgtggagatactggagaagcaattcatatgaatact 1122
>dbj|AK111714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021I24, full insert sequence Length = 1996 Score = 309 bits (156), Expect = 6e-81 Identities = 352/416 (84%), Gaps = 6/416 (1%) Strand = Plus / Minus Query: 172 agaaaccatacttgtttcggatttggtatttttccctattggacctacaagcttatcctt 231 ||||||||| || ||||| ||||| | ||||||||| | | ||||||| ||| ||||| Sbjct: 504 agaaaccatgctagtttcagatttcatgtttttccctgtggttcctacaaacttgtcctt 445 Query: 232 tttgagctttttgttaagagaaccaccctgctttccaccttctgaggatttttccttgtt 291 ||||| |||||| | | || ||||||||||||||||||||||||||| ||| |||||| Sbjct: 444 tttgatctttttat---gtgagccaccctgctttccaccttctgaggatcttttcttgtt 388 Query: 292 attatcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgc 351 | |||||| ||||||||||||||||||| ||||| | ||||||||||||| | ||| Sbjct: 387 gt---cttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgc 331 Query: 352 tttctccatacgctcctcaactgaatcttcaagcaacccccaatgcacttccttctgatt 411 ||||||||||| || |||| |||||||||||| | |||||||||||| ||||||||||| Sbjct: 330 cttctccatacgttcttcaagtgaatcttcaagtatcccccaatgcacctccttctgatt 271 Query: 412 tatctgttttgccaagtccttactagttccaaccagagcaacaacatcggcgtcatcaga 471 ||||||||||| ||||||||| |||||||||| |||| ||||| |||| | ||||||| Sbjct: 270 tatctgttttgtcaagtccttgctagttccaatcagaacaacagcatccgagtcatcaat 211 Query: 472 gatcaatgaaggctgcccagcagatacttcaaaaattatcctttcattgattattccaag 531 ||| |||| || |||||||| ||||||| |||| ||| | |||||||||||||||||| Sbjct: 210 gattaatggagactgcccaggggatacttgaaaatctatgcgttcattgattattccaag 151 Query: 532 catcacaagagcttgtgttttctagagatactggagaagtaattcatacgaatact 587 || |||||||||||||||||| | ||| ||||||||||| |||||||| ||||||| Sbjct: 150 caccacaagagcttgtgttttgtggagttactggagaagcaattcatatgaatact 95
>ref|XM_477065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1692 Score = 274 bits (138), Expect = 3e-70 Identities = 252/290 (86%) Strand = Plus / Minus Query: 296 tcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgctttc 355 ||||||| ||||||||||||||||||| ||||| | ||||||||||||| | ||| ||| Sbjct: 713 tcttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgccttc 654 Query: 356 tccatacgctcctcaactgaatcttcaagcaacccccaatgcacttccttctgatttatc 415 |||||||| || |||| |||||||||||| | |||||||||||| ||||||||||||||| Sbjct: 653 tccatacgttcttcaagtgaatcttcaagtatcccccaatgcacctccttctgatttatc 594 Query: 416 tgttttgccaagtccttactagttccaaccagagcaacaacatcggcgtcatcagagatc 475 ||||||| ||||||||| |||||||||| |||| ||||| |||| | ||||||| ||| Sbjct: 593 tgttttgtcaagtccttgctagttccaatcagaacaacagcatccgagtcatcaatgatt 534 Query: 476 aatgaaggctgcccagcagatacttcaaaaattatcctttcattgattattccaagcatc 535 |||| || |||||||| ||||||| |||| ||| | |||||||||||||||||||| | Sbjct: 533 aatggagactgcccaggggatacttgaaaatctatgcgttcattgattattccaagcacc 474 Query: 536 acaagagcttgtgttttctagagatactggagaagtaattcatacgaata 585 ||||||||||||||||| | ||||||||||||||| |||||||| ||||| Sbjct: 473 acaagagcttgtgttttgtggagatactggagaagcaattcatatgaata 424 Score = 61.9 bits (31), Expect = 2e-06 Identities = 90/109 (82%), Gaps = 3/109 (2%) Strand = Plus / Minus Query: 172 agaaaccatacttgtttcggatttggtatttttccctattggacctacaagcttatcctt 231 ||||||||| || ||||| ||||| | ||||||||| | | ||||||| ||| ||||| Sbjct: 849 agaaaccatgctagtttcagatttcatgtttttccctgtggttcctacaaacttgtcctt 790 Query: 232 tttgagctttttgttaagagaaccaccctgctttccaccttctgaggat 280 ||||| |||||| | | || ||||||||||||||||||||||||||| Sbjct: 789 tttgatctttttat---gtgagccaccctgctttccaccttctgaggat 744
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 514 ttcattgattattccaagcatcacaagagcttgtgttttctagagatactggagaagtaa 573 |||||||||||||||||||| |||||||||||||||||| | ||||||||||||||| || Sbjct: 5693966 ttcattgattattccaagcaccacaagagcttgtgttttgtggagatactggagaagcaa 5693907 Query: 574 ttcatacgaatactgcaat 592 |||||| |||||||||||| Sbjct: 5693906 ttcatatgaatactgcaat 5693888 Score = 103 bits (52), Expect = 7e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 388 cccccaatgcacttccttctgatttatctgttttgccaagtccttactagttccaaccag 447 |||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| ||| Sbjct: 5694208 cccccaatgcacctccttctgatttatctgttttgtcaagtccttgctagttccaatcag 5694149 Query: 448 agcaacaacatcggcgtcatcagagatcaatgaaggctgcccag 491 | ||||| |||| | ||||||| ||| |||| || |||||||| Sbjct: 5694148 aacaacagcatccgagtcatcaatgattaatggagactgcccag 5694105 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 296 tcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgctttc 355 ||||||| ||||||||||||||||||| ||||| | ||||||||||||| | ||| ||| Sbjct: 5694490 tcttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgccttc 5694431 Query: 356 tccatacgctcctcaactgaatcttcaag 384 |||||||| || |||| |||||||||||| Sbjct: 5694430 tccatacgttcttcaagtgaatcttcaag 5694402 Score = 61.9 bits (31), Expect = 2e-06 Identities = 90/109 (82%), Gaps = 3/109 (2%) Strand = Plus / Minus Query: 172 agaaaccatacttgtttcggatttggtatttttccctattggacctacaagcttatcctt 231 ||||||||| || ||||| ||||| | ||||||||| | | ||||||| ||| ||||| Sbjct: 5694993 agaaaccatgctagtttcagatttcatgtttttccctgtggttcctacaaacttgtcctt 5694934 Query: 232 tttgagctttttgttaagagaaccaccctgctttccaccttctgaggat 280 ||||| |||||| | | || ||||||||||||||||||||||||||| Sbjct: 5694933 tttgatctttttat---gtgagccaccctgctttccaccttctgaggat 5694888
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 514 ttcattgattattccaagcatcacaagagcttgtgttttctagagatactggagaagtaa 573 |||||||||||||||||||| |||||||||||||||||| | ||||||||||||||| || Sbjct: 994 ttcattgattattccaagcaccacaagagcttgtgttttgtggagatactggagaagcaa 935 Query: 574 ttcatacgaatactgcaat 592 |||||| |||||||||||| Sbjct: 934 ttcatatgaatactgcaat 916 Score = 103 bits (52), Expect = 7e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 388 cccccaatgcacttccttctgatttatctgttttgccaagtccttactagttccaaccag 447 |||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| ||| Sbjct: 1236 cccccaatgcacctccttctgatttatctgttttgtcaagtccttgctagttccaatcag 1177 Query: 448 agcaacaacatcggcgtcatcagagatcaatgaaggctgcccag 491 | ||||| |||| | ||||||| ||| |||| || |||||||| Sbjct: 1176 aacaacagcatccgagtcatcaatgattaatggagactgcccag 1133 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 296 tcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgctttc 355 ||||||| ||||||||||||||||||| ||||| | ||||||||||||| | ||| ||| Sbjct: 1518 tcttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgccttc 1459 Query: 356 tccatacgctcctcaactgaatcttcaag 384 |||||||| || |||| |||||||||||| Sbjct: 1458 tccatacgttcttcaagtgaatcttcaag 1430 Score = 61.9 bits (31), Expect = 2e-06 Identities = 90/109 (82%), Gaps = 3/109 (2%) Strand = Plus / Minus Query: 172 agaaaccatacttgtttcggatttggtatttttccctattggacctacaagcttatcctt 231 ||||||||| || ||||| ||||| | ||||||||| | | ||||||| ||| ||||| Sbjct: 2021 agaaaccatgctagtttcagatttcatgtttttccctgtggttcctacaaacttgtcctt 1962 Query: 232 tttgagctttttgttaagagaaccaccctgctttccaccttctgaggat 280 ||||| |||||| | | || ||||||||||||||||||||||||||| Sbjct: 1961 tttgatctttttat---gtgagccaccctgctttccaccttctgaggat 1916
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 514 ttcattgattattccaagcatcacaagagcttgtgttttctagagatactggagaagtaa 573 |||||||||||||||||||| |||||||||||||||||| | ||||||||||||||| || Sbjct: 155658 ttcattgattattccaagcaccacaagagcttgtgttttgtggagatactggagaagcaa 155599 Query: 574 ttcatacgaatactgcaat 592 |||||| |||||||||||| Sbjct: 155598 ttcatatgaatactgcaat 155580 Score = 103 bits (52), Expect = 7e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 388 cccccaatgcacttccttctgatttatctgttttgccaagtccttactagttccaaccag 447 |||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| ||| Sbjct: 155900 cccccaatgcacctccttctgatttatctgttttgtcaagtccttgctagttccaatcag 155841 Query: 448 agcaacaacatcggcgtcatcagagatcaatgaaggctgcccag 491 | ||||| |||| | ||||||| ||| |||| || |||||||| Sbjct: 155840 aacaacagcatccgagtcatcaatgattaatggagactgcccag 155797 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 296 tcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgctttc 355 ||||||| ||||||||||||||||||| ||||| | ||||||||||||| | ||| ||| Sbjct: 156182 tcttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgccttc 156123 Query: 356 tccatacgctcctcaactgaatcttcaag 384 |||||||| || |||| |||||||||||| Sbjct: 156122 tccatacgttcttcaagtgaatcttcaag 156094 Score = 61.9 bits (31), Expect = 2e-06 Identities = 90/109 (82%), Gaps = 3/109 (2%) Strand = Plus / Minus Query: 172 agaaaccatacttgtttcggatttggtatttttccctattggacctacaagcttatcctt 231 ||||||||| || ||||| ||||| | ||||||||| | | ||||||| ||| ||||| Sbjct: 156685 agaaaccatgctagtttcagatttcatgtttttccctgtggttcctacaaacttgtcctt 156626 Query: 232 tttgagctttttgttaagagaaccaccctgctttccaccttctgaggat 280 ||||| |||||| | | || ||||||||||||||||||||||||||| Sbjct: 156625 tttgatctttttat---gtgagccaccctgctttccaccttctgaggat 156580
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 103 bits (52), Expect = 7e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 293 ttatcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgct 352 |||||||| || ||||||||||||||||||||||||| | |||| || ||| | |||| | Sbjct: 26148975 ttatcttcggcatctgcatccttgctttctgcttcagttttatctgattctaaaagtgtt 26148916 Query: 353 ttctccatacgctcctcaactgaatcttcaagcaac 388 |||||||| ||||| ||||||||||||||||||||| Sbjct: 26148915 ttctccatgcgctcttcaactgaatcttcaagcaac 26148880 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Minus Query: 514 ttcattgattattccaagcatcacaagagcttgtgttttctagagatactggagaagtaa 573 |||||| ||||||||||| | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 26148463 ttcatttattattccaagaaccacaagagcttgtgttttctggagatactggaggagtaa 26148404 Query: 574 ttcatacgaatactgcaa 591 ||||| ||||||||||| Sbjct: 26148403 ctcatatgaatactgcaa 26148386 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 388 cccccaatgcacttccttctgatttatctgttttgccaagtccttactagttccaaccag 447 |||||||||||| |||||| ||||||| ||||||||||| ||||| | |||||||| || Sbjct: 26148698 cccccaatgcacctccttcagatttatttgttttgccaaatccttctttgttccaactag 26148639 Query: 448 agcaacaacatcggcgtcatcagagatcaatgaaggctgcccag 491 |||||||||||| | |||||||||||| || || ||||| |||| Sbjct: 26148638 agcaacaacatccgtgtcatcagagattaaagatggctgaccag 26148595 Score = 69.9 bits (35), Expect = 1e-08 Identities = 121/149 (81%), Gaps = 3/149 (2%) Strand = Plus / Minus Query: 135 ctggaagggttagctccagtttcacacgaggtgccgcagaaaccatacttgtttcggatt 194 ||||||| || ||||| ||||||||||||||||| | ||||| || |||||||| |||| Sbjct: 26149384 ctggaagtgtaagctctggtttcacacgaggtgccaccgaaactatgcttgtttcagatt 26149325 Query: 195 tggtatttttccctattggacctacaagcttatcctttttgagctttttgttaagagaac 254 | | |||||||| | | ||| ||| |||||| ||||||| |||| |||| ||||| Sbjct: 26149324 tattggttttccctgtggctcctgcaatcttatcttttttgaccttt---ttaacagaac 26149268 Query: 255 caccctgctttccaccttctgaggatttt 283 | ||||||||||||||||| || |||||| Sbjct: 26149267 ctccctgctttccaccttccgaagatttt 26149239
>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J02 Length = 151636 Score = 103 bits (52), Expect = 7e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 293 ttatcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgct 352 |||||||| || ||||||||||||||||||||||||| | |||| || ||| | |||| | Sbjct: 128220 ttatcttcggcatctgcatccttgctttctgcttcagttttatctgattctaaaagtgtt 128161 Query: 353 ttctccatacgctcctcaactgaatcttcaagcaac 388 |||||||| ||||| ||||||||||||||||||||| Sbjct: 128160 ttctccatgcgctcttcaactgaatcttcaagcaac 128125 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Minus Query: 514 ttcattgattattccaagcatcacaagagcttgtgttttctagagatactggagaagtaa 573 |||||| ||||||||||| | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 127708 ttcatttattattccaagaaccacaagagcttgtgttttctggagatactggaggagtaa 127649 Query: 574 ttcatacgaatactgcaa 591 ||||| ||||||||||| Sbjct: 127648 ctcatatgaatactgcaa 127631 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 388 cccccaatgcacttccttctgatttatctgttttgccaagtccttactagttccaaccag 447 |||||||||||| |||||| ||||||| ||||||||||| ||||| | |||||||| || Sbjct: 127943 cccccaatgcacctccttcagatttatttgttttgccaaatccttctttgttccaactag 127884 Query: 448 agcaacaacatcggcgtcatcagagatcaatgaaggctgcccag 491 |||||||||||| | |||||||||||| || || ||||| |||| Sbjct: 127883 agcaacaacatccgtgtcatcagagattaaagatggctgaccag 127840 Score = 69.9 bits (35), Expect = 1e-08 Identities = 121/149 (81%), Gaps = 3/149 (2%) Strand = Plus / Minus Query: 135 ctggaagggttagctccagtttcacacgaggtgccgcagaaaccatacttgtttcggatt 194 ||||||| || ||||| ||||||||||||||||| | ||||| || |||||||| |||| Sbjct: 128629 ctggaagtgtaagctctggtttcacacgaggtgccaccgaaactatgcttgtttcagatt 128570 Query: 195 tggtatttttccctattggacctacaagcttatcctttttgagctttttgttaagagaac 254 | | |||||||| | | ||| ||| |||||| ||||||| |||| |||| ||||| Sbjct: 128569 tattggttttccctgtggctcctgcaatcttatcttttttgaccttt---ttaacagaac 128513 Query: 255 caccctgctttccaccttctgaggatttt 283 | ||||||||||||||||| || |||||| Sbjct: 128512 ctccctgctttccaccttccgaagatttt 128484
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 103 bits (52), Expect = 7e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 293 ttatcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgct 352 |||||||| || ||||||||||||||||||||||||| | |||| || ||| | |||| | Sbjct: 13515 ttatcttcggcatctgcatccttgctttctgcttcagttttatctgattctaaaagtgtt 13456 Query: 353 ttctccatacgctcctcaactgaatcttcaagcaac 388 |||||||| ||||| ||||||||||||||||||||| Sbjct: 13455 ttctccatgcgctcttcaactgaatcttcaagcaac 13420 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Minus Query: 514 ttcattgattattccaagcatcacaagagcttgtgttttctagagatactggagaagtaa 573 |||||| ||||||||||| | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 13003 ttcatttattattccaagaaccacaagagcttgtgttttctggagatactggaggagtaa 12944 Query: 574 ttcatacgaatactgcaa 591 ||||| ||||||||||| Sbjct: 12943 ctcatatgaatactgcaa 12926 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 388 cccccaatgcacttccttctgatttatctgttttgccaagtccttactagttccaaccag 447 |||||||||||| |||||| ||||||| ||||||||||| ||||| | |||||||| || Sbjct: 13238 cccccaatgcacctccttcagatttatttgttttgccaaatccttctttgttccaactag 13179 Query: 448 agcaacaacatcggcgtcatcagagatcaatgaaggctgcccag 491 |||||||||||| | |||||||||||| || || ||||| |||| Sbjct: 13178 agcaacaacatccgtgtcatcagagattaaagatggctgaccag 13135 Score = 69.9 bits (35), Expect = 1e-08 Identities = 121/149 (81%), Gaps = 3/149 (2%) Strand = Plus / Minus Query: 135 ctggaagggttagctccagtttcacacgaggtgccgcagaaaccatacttgtttcggatt 194 ||||||| || ||||| ||||||||||||||||| | ||||| || |||||||| |||| Sbjct: 13924 ctggaagtgtaagctctggtttcacacgaggtgccaccgaaactatgcttgtttcagatt 13865 Query: 195 tggtatttttccctattggacctacaagcttatcctttttgagctttttgttaagagaac 254 | | |||||||| | | ||| ||| |||||| ||||||| |||| |||| ||||| Sbjct: 13864 tattggttttccctgtggctcctgcaatcttatcttttttgaccttt---ttaacagaac 13808 Query: 255 caccctgctttccaccttctgaggatttt 283 | ||||||||||||||||| || |||||| Sbjct: 13807 ctccctgctttccaccttccgaagatttt 13779
>ref|XM_369725.1| Magnaporthe grisea 70-15 hypothetical protein (MG06240.4) partial mRNA Length = 1647 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 448 agcaacaacatcggcgtcatca 469 |||||||||||||||||||||| Sbjct: 715 agcaacaacatcggcgtcatca 736
>emb|AL451137.8| Human DNA sequence from clone RP11-18A15 on chromosome 9 Contains a CpG island, complete sequence Length = 162837 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 628 gaaatattttctaggaaagaca 649 |||||||||||||||||||||| Sbjct: 37358 gaaatattttctaggaaagaca 37337
>emb|AL442639.2|HS5P15 Homo sapiens chromosome 9 BAC RP11-5P15, complete sequence Length = 165299 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 628 gaaatattttctaggaaagaca 649 |||||||||||||||||||||| Sbjct: 146550 gaaatattttctaggaaagaca 146529
>gb|DQ386648.1| Astatotilapia burtoni clone BAC 26M7 platelet-derived growth factor receptor beta a (pdgfrba) and colony-stimulating factor 1 receptor a (csf1ra) genes, complete cds Length = 97628 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 cttgctttctgcttcagctct 333 ||||||||||||||||||||| Sbjct: 24332 cttgctttctgcttcagctct 24352
>gb|AC139349.4| Mus musculus BAC clone RP24-318A14 from chromosome 8, complete sequence Length = 199464 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 476 aatgaaggctgcccagcagatactt 500 |||||||||| |||||||||||||| Sbjct: 154919 aatgaaggcttcccagcagatactt 154943
>ref|XM_677567.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9390.2), mRNA Length = 3399 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gtgccgcagaaaccatacttg 185 ||||||||||||||||||||| Sbjct: 320 gtgccgcagaaaccatacttg 300
>gb|AC151307.2| Xenopus tropicalis clone CH216-61M14, complete sequence Length = 164963 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 412 tatctgttttgccaagtcctt 432 ||||||||||||||||||||| Sbjct: 145104 tatctgttttgccaagtcctt 145124
>gb|DQ232392.1| Uncultured bacterium clone CYCU-0228 NirS (nirS) gene, partial cds Length = 843 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 440 ccaaccagagcaacaacatcggcgtcatc 468 |||||||||||||||| || ||||||||| Sbjct: 256 ccaaccagagcaacaagattggcgtcatc 284
>dbj|AB162302.1| Uncultured bacterium nirS gene for nitrite reductase, partial cds, clone:S-Z46 Length = 773 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 440 ccaaccagagcaacaacatcggcgtcatc 468 |||||||||||||||| || ||||||||| Sbjct: 236 ccaaccagagcaacaagattggcgtcatc 264
>dbj|AB162288.1| Uncultured bacterium nirS gene for nitrite reductase, partial cds, clone:S-Z32 Length = 773 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 440 ccaaccagagcaacaacatcggcgtcatc 468 |||||||||||||||| || ||||||||| Sbjct: 236 ccaaccagagcaacaagattggcgtcatc 264
>dbj|AB162268.1| Uncultured bacterium nirS gene for nitrite reductase, partial cds, clone:S-Z12 Length = 773 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 440 ccaaccagagcaacaacatcggcgtcatc 468 |||||||||||||||| || ||||||||| Sbjct: 236 ccaaccagagcaacaagattggcgtcatc 264
>dbj|AB162254.1| Uncultured bacterium nirS gene for nitrite reductase, partial cds, clone: S-A25 Length = 785 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 440 ccaaccagagcaacaacatcggcgtcatc 468 |||||||||||||||| || ||||||||| Sbjct: 236 ccaaccagagcaacaagattggcgtcatc 264
>dbj|AB162240.1| Uncultured bacterium nirS gene for nitrite reductase, partial cds, clone: S-A11 Length = 786 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 440 ccaaccagagcaacaacatcggcgtcatc 468 |||||||||||||||| || ||||||||| Sbjct: 236 ccaaccagagcaacaagattggcgtcatc 264
>gb|AF314225.1|AF314225 Aspergillus nidulans chitinase (chiC) gene, complete cds Length = 5148 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gtgccgcagaaaccatacttg 185 ||||||||||||||||||||| Sbjct: 1948 gtgccgcagaaaccatacttg 1928
>dbj|AP002066.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T4A2 Length = 18364 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 626 ttgaaatattttctaggaaag 646 ||||||||||||||||||||| Sbjct: 6744 ttgaaatattttctaggaaag 6764
>emb|AL808128.4| Mouse DNA sequence from clone RP23-387C21 on chromosome 2, complete sequence Length = 184736 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 caccctgctttccaccttctg 275 ||||||||||||||||||||| Sbjct: 148087 caccctgctttccaccttctg 148107
>gb|AC157087.2| Mus musculus BAC clone RP23-287O24 from chromosome 9, complete sequence Length = 226149 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ttatatttttcaaagtctac 56 |||||||||||||||||||| Sbjct: 222352 ttatatttttcaaagtctac 222371
>gb|AC152418.5| Mus musculus BAC clone RP23-7L11 from chromosome 7, complete sequence Length = 249571 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 563 tggagaagtaattcatacgaatac 586 ||||||||| |||||||||||||| Sbjct: 233522 tggagaagtcattcatacgaatac 233545
>gb|AC157899.5| Mus musculus chromosome 15, clone RP23-98F15, complete sequence Length = 199372 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ttatatttttcaaagtctac 56 |||||||||||||||||||| Sbjct: 89651 ttatatttttcaaagtctac 89670
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 375 aatcttcaagcaacccccaatgcacttc 402 ||||||||||||||||| |||| ||||| Sbjct: 2255540 aatcttcaagcaaccccaaatgtacttc 2255567
>gb|BC081137.1| Xenopus laevis MGC83957 protein, mRNA (cDNA clone MGC:83957 IMAGE:6862393), complete cds Length = 3593 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tgaatcttcaagcaaccccc 392 |||||||||||||||||||| Sbjct: 2690 tgaatcttcaagcaaccccc 2671
>gb|AC129593.4| Mus musculus BAC clone RP24-142E6 from chromosome 7, complete sequence Length = 210291 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 tggaagggttagctccagtttcac 159 |||| ||||||||||||||||||| Sbjct: 76722 tggatgggttagctccagtttcac 76699
>gb|AC108822.9| Mus musculus chromosome 3, clone RP23-63A19, complete sequence Length = 158678 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cccccaatgcacttccttct 407 |||||||||||||||||||| Sbjct: 90054 cccccaatgcacttccttct 90073
>gb|AC105330.8| Mus musculus chromosome 15, clone RP23-281C10, complete sequence Length = 206675 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ttatatttttcaaagtctac 56 |||||||||||||||||||| Sbjct: 157733 ttatatttttcaaagtctac 157752
>gb|AY318651.2| Mus musculus olfactory receptor Olfr1432 (Olfr1432) gene, partial cds Length = 780 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tttccttgttattatcttct 301 |||||||||||||||||||| Sbjct: 453 tttccttgttattatcttct 472
>gb|AY318648.1| Mus musculus olfactory receptor Olfr1429-ps1 pseudogene, complete sequence Length = 962 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tttccttgttattatcttct 301 |||||||||||||||||||| Sbjct: 644 tttccttgttattatcttct 663
>gb|U53155.1| Caenorhabditis elegans cosmid ZC513, complete sequence Length = 37581 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tttggtatttttccctattg 212 |||||||||||||||||||| Sbjct: 31764 tttggtatttttccctattg 31783
>gb|AC164635.5| Mus musculus BAC clone RP23-65G17 from chromosome 16, complete sequence Length = 162255 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tttttccttgttattatctt 299 |||||||||||||||||||| Sbjct: 145805 tttttccttgttattatctt 145786
>ref|XM_986116.1| PREDICTED: Mus musculus similar to olfactory receptor Olr327 (LOC671302), mRNA Length = 1041 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tttccttgttattatcttct 301 |||||||||||||||||||| Sbjct: 648 tttccttgttattatcttct 667
>ref|XR_004804.1| PREDICTED: Mus musculus similar to olfactory receptor Olr327 (LOC675592), mRNA Length = 843 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tttccttgttattatcttct 301 |||||||||||||||||||| Sbjct: 450 tttccttgttattatcttct 469
>ref|XM_909602.2| PREDICTED: Mus musculus hypothetical LOC634769 (LOC634769), mRNA Length = 3850 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tatttatatttttcaaagtc 53 |||||||||||||||||||| Sbjct: 1987 tatttatatttttcaaagtc 2006
>gb|AC165174.2| Zea mays clone ZMMBBb-127F19, complete sequence Length = 187659 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 624 agttgaaatattttctagga 643 |||||||||||||||||||| Sbjct: 96077 agttgaaatattttctagga 96096
>gb|AC133601.3| Mus musculus BAC clone RP24-179O1 from chromosome 18, complete sequence Length = 180978 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tatttatatttttcaaagtc 53 |||||||||||||||||||| Sbjct: 101536 tatttatatttttcaaagtc 101517
>gb|AC129773.4| Mus musculus BAC clone RP24-73D4 from chromosome 19, complete sequence Length = 218771 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 tttccttgttattatcttct 301 |||||||||||||||||||| Sbjct: 2375 tttccttgttattatcttct 2356
>gb|AC125325.4| Mus musculus BAC clone RP23-296K22 from chromosome 9, complete sequence Length = 156124 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 cttgctttctgcttcagctc 332 |||||||||||||||||||| Sbjct: 90802 cttgctttctgcttcagctc 90821
>gb|AC135081.3| Mus musculus BAC clone RP24-131A24 from chromosome 7, complete sequence Length = 163138 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 tggaagggttagctccagtttcac 159 |||| ||||||||||||||||||| Sbjct: 24503 tggatgggttagctccagtttcac 24526
>gb|AC122034.3| Mus musculus BAC clone RP24-403M18 from chromosome 15, complete sequence Length = 182891 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 cttatcctttttgagctttt 242 |||||||||||||||||||| Sbjct: 15520 cttatcctttttgagctttt 15501
>gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complete sequence Length = 245757 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cttatcctttttgagctttt 242 |||||||||||||||||||| Sbjct: 54845 cttatcctttttgagctttt 54864
>gb|AC122028.3| Mus musculus BAC clone RP24-394D4 from 2, complete sequence Length = 173301 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 tcacaagagcttgtgttttc 553 |||||||||||||||||||| Sbjct: 146395 tcacaagagcttgtgttttc 146414
>ref|XM_947223.1| Theileria annulata strain Ankara hypothetical protein (TA12980) partial mRNA Length = 2508 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 agctctatcagaatctgaga 347 |||||||||||||||||||| Sbjct: 1230 agctctatcagaatctgaga 1211
>emb|AL512631.11| Human DNA sequence from clone RP11-138I18 on chromosome 10 Contains the 5' end of the gene for a protein related to the N terminus of tre (RNTRE) (KIAA0019) and a CpG island, complete sequence Length = 142863 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 625 gttgaaatattttctaggaa 644 |||||||||||||||||||| Sbjct: 126623 gttgaaatattttctaggaa 126642
>emb|AL353739.4| Human DNA sequence from clone RP11-19D15 on chromosome 20 Contains STSs and GSSs, complete sequence Length = 101388 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 631 atattttctaggaaagacaa 650 |||||||||||||||||||| Sbjct: 28189 atattttctaggaaagacaa 28170
>gb|AC012308.12| Homo sapiens chromosome 10 clone RP11-5G18, complete sequence Length = 163816 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 ggtatttatatttttcaaag 51 |||||||||||||||||||| Sbjct: 33770 ggtatttatatttttcaaag 33751
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 ttattccaagcatcacaaga 541 |||||||||||||||||||| Sbjct: 3545240 ttattccaagcatcacaaga 3545259
>gb|AC153950.8| Mus musculus 10 BAC RP24-444M16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 193809 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cctttttgagctttttgtta 247 |||||||||||||||||||| Sbjct: 171399 cctttttgagctttttgtta 171418
>gb|AC069435.19| Homo sapiens 3 BAC RP11-384L1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111861 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 atattttctaggaaagacaa 650 |||||||||||||||||||| Sbjct: 9626 atattttctaggaaagacaa 9645
>emb|BX120006.15| Zebrafish DNA sequence from clone DKEYP-21H4 in linkage group 3, complete sequence Length = 196854 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 614 aaacaggaacagttgaaatatttt 637 |||||||||||||| ||||||||| Sbjct: 156932 aaacaggaacagttcaaatatttt 156955
>gb|AC092278.3| Homo sapiens chromosome 5 clone CTD-2012B7, complete sequence Length = 123469 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 ttataggaatggtatttatatttt 45 ||||| |||||||||||||||||| Sbjct: 123380 ttataagaatggtatttatatttt 123357
>gb|AY096300.1| Mus musculus olfactory receptor GA_x5J8B7W20A2-6027-5647 gene, partial cds Length = 381 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tttccttgttattatcttct 301 |||||||||||||||||||| Sbjct: 72 tttccttgttattatcttct 91
>gb|AC098482.2| Homo sapiens chromosome 3 clone RP11-839L21, complete sequence Length = 211533 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 ttttctagagatactggaga 568 |||||||||||||||||||| Sbjct: 149914 ttttctagagatactggaga 149933
>gb|AC004450.3| Arabidopsis thaliana chromosome 2 clone F14B2 map CIC10F02, complete sequence Length = 90283 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 tcaactgaatcttcaagcaa 387 |||||||||||||||||||| Sbjct: 70398 tcaactgaatcttcaagcaa 70417
>gb|AY074155.1| Mus musculus olfactory receptor MOR202-32P pseudogene, partial sequence Length = 752 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tttccttgttattatcttct 301 |||||||||||||||||||| Sbjct: 434 tttccttgttattatcttct 453
>gb|AC113405.2| Homo sapiens chromosome 5 clone RP11-467C9, complete sequence Length = 134319 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 ttataggaatggtatttatatttt 45 ||||| |||||||||||||||||| Sbjct: 7725 ttataagaatggtatttatatttt 7702
>gb|AC068896.9| Homo sapiens chromosome 10 clone RP11-464O2, complete sequence Length = 194905 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 622 acagttgaaatattttctag 641 |||||||||||||||||||| Sbjct: 55908 acagttgaaatattttctag 55889
>gb|AC097513.2| Homo sapiens BAC clone RP11-419E3 from 4, complete sequence Length = 151389 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tggtatttatatttttcaaa 50 |||||||||||||||||||| Sbjct: 23428 tggtatttatatttttcaaa 23447
>gb|AC068399.9| Homo sapiens chromosome 8, clone RP11-809K10, complete sequence Length = 195367 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tatttatatttttcaaagtc 53 |||||||||||||||||||| Sbjct: 120623 tatttatatttttcaaagtc 120642
>ref|NM_072676.1| Caenorhabditis elegans Seven TM Receptor family member (str-138) (str-138) mRNA, complete cds Length = 987 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tttggtatttttccctattg 212 |||||||||||||||||||| Sbjct: 419 tttggtatttttccctattg 438
>dbj|AK035890.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630014M24 product:hypothetical protein, full insert sequence Length = 3865 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tatttatatttttcaaagtc 53 |||||||||||||||||||| Sbjct: 2005 tatttatatttttcaaagtc 2024
>gb|AC153528.2| Mus musculus 10 BAC RP23-75N1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 159605 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cctttttgagctttttgtta 247 |||||||||||||||||||| Sbjct: 155336 cctttttgagctttttgtta 155317
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 atttttccttgttattatct 298 |||||||||||||||||||| Sbjct: 29515510 atttttccttgttattatct 29515491
>gb|AC106860.6| Homo sapiens BAC clone RP13-488D7 from 4, complete sequence Length = 180424 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 tcctttcattgattattcca 529 |||||||||||||||||||| Sbjct: 9807 tcctttcattgattattcca 9826
>gb|AC016762.5| Homo sapiens BAC clone RP11-540F24 from 2, complete sequence Length = 42886 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 gtatttatatttttcaaagtctac 56 |||||||||||||||||| ||||| Sbjct: 16215 gtatttatatttttcaaattctac 16238
>gb|AC156800.2| Mus musculus BAC clone RP23-366B23 from chromosome 9, complete sequence Length = 190619 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 cttgctttctgcttcagctc 332 |||||||||||||||||||| Sbjct: 24893 cttgctttctgcttcagctc 24874
>gb|BC042662.1| Mus musculus, Similar to zinc finger protein 60, clone IMAGE:2645174, mRNA Length = 4839 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tggtatttatatttttcaaa 50 |||||||||||||||||||| Sbjct: 1541 tggtatttatatttttcaaa 1560
>gb|AC122281.2| Mus musculus chromosome 16 clone RP23-239I17, complete sequence Length = 204608 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tttttccttgttattatctt 299 |||||||||||||||||||| Sbjct: 39881 tttttccttgttattatctt 39862
>gb|AC108857.13| Mus musculus chromosome 1, clone RP24-389A10, complete sequence Length = 190617 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tcaaaaattatcctttcatt 519 |||||||||||||||||||| Sbjct: 35246 tcaaaaattatcctttcatt 35227
>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08 Length = 156850 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 atttttccttgttattatct 298 |||||||||||||||||||| Sbjct: 81784 atttttccttgttattatct 81765
>ref|NM_001033771.1| Mus musculus RIKEN cDNA 9630014M24 gene (9630014M24Rik), mRNA Length = 3865 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tatttatatttttcaaagtc 53 |||||||||||||||||||| Sbjct: 2005 tatttatatttttcaaagtc 2024
>gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, complete sequence Length = 202863 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tggtatttatatttttcaaa 50 |||||||||||||||||||| Sbjct: 72024 tggtatttatatttttcaaa 72043
>gb|AC010516.4|AC010516 Homo sapiens chromosome 19 clone LLNLR-251C10, complete sequence Length = 39209 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 cccagcagatacttcaaaaa 506 |||||||||||||||||||| Sbjct: 18162 cccagcagatacttcaaaaa 18181
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 ttattccaagcatcacaaga 541 |||||||||||||||||||| Sbjct: 3637594 ttattccaagcatcacaaga 3637613
>emb|BX284649.14| Mouse DNA sequence from clone RP23-42M7 on chromosome 2, complete sequence Length = 127220 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 tcacaagagcttgtgttttc 553 |||||||||||||||||||| Sbjct: 113670 tcacaagagcttgtgttttc 113651
>emb|AL732429.11| Mouse DNA sequence from clone RP23-89N11 on chromosome X, complete sequence Length = 164991 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tggtatttatatttttcaaa 50 |||||||||||||||||||| Sbjct: 101502 tggtatttatatttttcaaa 101483
>gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 map 7, complete sequence Length = 199260 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tggtatttatatttttcaaa 50 |||||||||||||||||||| Sbjct: 140091 tggtatttatatttttcaaa 140072
>emb|X66692.1|ZMPGALAC Z.mays gene for polygalacturonase Length = 3788 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 624 agttgaaatattttctagga 643 |||||||||||||||||||| Sbjct: 2042 agttgaaatattttctagga 2023
>gb|AF466202.2| Zea mays putative pol protein gene, partial cds; and putative gag-pol precursor -orf2, putative Fourf gag/pol protein, putative NADP-dependent malic enzyme, putative argonaute protein, putative pinhead protein, putative pol protein, putative gag protein, putative TNP2, r1-B73 proteins, putative genetic modifier, putative S-receptor kinase, putative aldose reductase-related protein, putative glutathione peroxidase, putative glycerol 3-phosphate permease, putative response regulator, and putative 4-coumarate-CoA ligase-like protein genes, complete cds Length = 290350 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 624 agttgaaatattttctagga 643 |||||||||||||||||||| Sbjct: 223124 agttgaaatattttctagga 223105
>emb|CT573422.5| Mouse DNA sequence from clone RP24-76M8 on chromosome 9, complete sequence Length = 193236 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ttatatttttcaaagtctac 56 |||||||||||||||||||| Sbjct: 166663 ttatatttttcaaagtctac 166682
>emb|Z70268.1|CET21E8 Caenorhabditis elegans Cosmid T21E8, complete sequence Length = 27764 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ttaaacaggaacagttgaaa 631 |||||||||||||||||||| Sbjct: 27017 ttaaacaggaacagttgaaa 26998
>emb|Z69383.1|CEF13E9 Caenorhabditis elegans Cosmid F13E9, complete sequence Length = 34074 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 tctacagttgaggaattatttaga 75 |||||| ||||||||||||||||| Sbjct: 1698 tctacatttgaggaattatttaga 1721
>emb|AL732497.15| Mouse DNA sequence from clone RP23-130H14 on chromosome 4, complete sequence Length = 208663 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cccaatgcacttccttctga 409 |||||||||||||||||||| Sbjct: 31967 cccaatgcacttccttctga 31986
>emb|AL954307.7| Zebrafish DNA sequence from clone CH211-201C19, complete sequence Length = 175575 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 tttaaacaggaacagttgaa 630 |||||||||||||||||||| Sbjct: 126120 tttaaacaggaacagttgaa 126101
>gb|AC150745.2| Mus musculus BAC clone RP24-77E13 from 7, complete sequence Length = 232607 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 563 tggagaagtaattcatacgaatac 586 ||||||||| |||||||||||||| Sbjct: 104143 tggagaagtcattcatacgaatac 104120
>gb|AC151409.2| Mus musculus BAC clone RP24-541K8 from 18, complete sequence Length = 179265 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tatttatatttttcaaagtc 53 |||||||||||||||||||| Sbjct: 173136 tatttatatttttcaaagtc 173117
>gb|AC131724.4| Mus musculus BAC clone RP23-129E9 from 19, complete sequence Length = 225611 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 tttccttgttattatcttct 301 |||||||||||||||||||| Sbjct: 205826 tttccttgttattatcttct 205807 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,773,113 Number of Sequences: 3902068 Number of extensions: 7773113 Number of successful extensions: 161932 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 161446 Number of HSP's gapped (non-prelim): 481 length of query: 662 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 639 effective length of database: 17,143,297,704 effective search space: 10954567232856 effective search space used: 10954567232856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)