ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7f22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018792.1| Zea mays clone EL01N0527H07.d mRNA sequence 204 2e-49
2ref|XM_476927.1| Oryza sativa (japonica cultivar-group), mRNA 178 1e-41
3dbj|AK065328.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 1e-23
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
5dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
6dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
7ref|NM_202963.1| Arabidopsis thaliana electron carrier AT4G36400... 46 0.13
8ref|NM_119803.2| Arabidopsis thaliana electron carrier AT4G36400... 46 0.13
9emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA ... 46 0.13
10emb|AL161589.2|ATCHRIV85 Arabidopsis thaliana DNA chromosome 4, ... 46 0.13
11gb|AY090301.1| Arabidopsis thaliana At4g36400/C7A10_960 mRNA, co... 46 0.13
12gb|AY058061.1| Arabidopsis thaliana At4g36400/C7A10_960 mRNA, co... 46 0.13
13dbj|AK117677.1| Arabidopsis thaliana mRNA, clone: RAFL17-33-P19 46 0.13
14dbj|AP006712.1| Lotus japonicus genomic DNA, chromosome 2, clone... 46 0.13
15ref|XM_421271.1| PREDICTED: Gallus gallus similar to FLJ00353 pr... 42 2.1
16emb|CR392350.11| Zebrafish DNA sequence from clone DKEY-61N21 in... 42 2.1
17gb|AC110747.3| Homo sapiens, clone RP11-103L16, complete sequence 42 2.1
18emb|AL954311.13| Zebrafish DNA sequence from clone CH211-138M12 ... 42 2.1
19emb|AL691424.7| Mouse DNA sequence from clone RP23-219K12 on chr... 42 2.1
20gb|AC120400.11| Mus musculus chromosome 1, clone RP24-351P4, com... 40 8.2
21ref|XM_422664.1| PREDICTED: Gallus gallus similar to AI325464 pr... 40 8.2
22gb|AC149058.7| Mus musculus BAC clone RP23-338G5 from chromosome... 40 8.2
23ref|XM_803745.1| Trypanosoma cruzi strain CL Brener mucin TcMUCI... 40 8.2
24gb|AC127369.4| Mus musculus BAC clone RP23-26A15 from 8, complet... 40 8.2
25gb|AC116734.14| Mus musculus chromosome 7, clone RP23-359D11, co... 40 8.2
26gb|AC102705.10| Mus musculus, clone RP24-400C16, complete sequence 40 8.2
27gb|AC113194.8| Homo sapiens chromosome 8, clone RP11-1070A24, co... 40 8.2
28gb|AC100821.2| Homo sapiens chromosome 8, clone RP11-30L15, comp... 40 8.2
29emb|AL691491.11| Mouse DNA sequence from clone RP23-426J14 on ch... 40 8.2
30dbj|AK157218.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 8.2
31emb|CR354188.1| Gallus gallus finished cDNA, clone ChEST64j11 40 8.2
32dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
34gb|AC074182.6| Homo sapiens BAC clone RP11-553G13 from 2, comple... 40 8.2
35dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
36dbj|AP005743.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
37dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
38emb|AL929305.4| Zebrafish DNA sequence from clone DKEY-110K5, co... 40 8.2
39gb|AY555143.1| Zea may BAC clone c573L14, complete sequence 40 8.2
40emb|BX004976.7| Zebrafish DNA sequence from clone CH211-276C7, c... 40 8.2
41dbj|AP003071.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.2
42emb|AL844586.5| Mouse DNA sequence from clone RP23-259N17 on chr... 40 8.2 
>gb|BT018792.1| Zea mays clone EL01N0527H07.d mRNA sequence
          Length = 1575

 Score =  204 bits (103), Expect = 2e-49
 Identities = 181/207 (87%)
 Strand = Plus / Minus

                                                                        
Query: 375  cagactgaggtagaaccttgtatgggtttagaattgagttagggtccagtaacttcttga 434
            ||||||| || ||||||||||| || || || || || || |||||||| ||||||||||
Sbjct: 1233 cagactgcggcagaaccttgtagggattaaggatcgacttggggtccagcaacttcttga 1174

                                                                        
Query: 435  tggaagccattagctgcactgcttctggtgacttgctgtagtgaatcttctcagctttca 494
            |||| |||||||| || |||||||| ||||| || |||||||||||||||||||||||||
Sbjct: 1173 tggaggccattagttgtactgcttcaggtgatttactgtagtgaatcttctcagctttca 1114

                                                                        
Query: 495  ttagccccaatccgtgctctgcgctgatgcttcctctgtggccagcagtccactcataga 554
            |||||||||| || ||||||||||||||||||||||| ||  | |  |||||||||||||
Sbjct: 1113 ttagccccaaaccatgctctgcgctgatgcttcctctttgtgctgatgtccactcataga 1054

                                       
Query: 555  caaatggttcaatttgtgccagaatat 581
            | ||||||||||||||||| |||||||
Sbjct: 1053 cgaatggttcaatttgtgcgagaatat 1027
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>ref|XM_476927.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1680

 Score =  178 bits (90), Expect = 1e-41
 Identities = 186/218 (85%)
 Strand = Plus / Minus

                                                                        
Query: 377  gactgaggtagaaccttgtatgggtttagaattgagttagggtccagtaacttcttgatg 436
            ||||| || ||||||||||| ||||| || ||||| || ||||| || ||||||||||||
Sbjct: 1670 gactgtgggagaaccttgtaggggttcaggattgaatttgggtcgagcaacttcttgatg 1611

                                                                        
Query: 437  gaagccattagctgcactgcttctggtgacttgctgtagtgaatcttctcagctttcatt 496
            |||||||| || |||||||| || | |||||||||||||||||||||||| |||||||||
Sbjct: 1610 gaagccatcagttgcactgcctcagatgacttgctgtagtgaatcttctcggctttcatt 1551

                                                                        
Query: 497  agccccaatccgtgctctgcgctgatgcttcctctgtggccagcagtccactcatagaca 556
            || |||||||| |||||||| || ||||| ||||| ||    |  |||||||| ||||||
Sbjct: 1550 agacccaatccatgctctgcactaatgctccctctctgtttggaggtccactcgtagaca 1491

                                                  
Query: 557  aatggttcaatttgtgccagaatatcgtcactgtactt 594
            |||||||||||||||||||| || | ||| ||||||||
Sbjct: 1490 aatggttcaatttgtgccagcatcttgtcgctgtactt 1453
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>dbj|AK065328.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D19, full
            insert sequence
          Length = 3042

 Score =  119 bits (60), Expect = 1e-23
 Identities = 114/132 (86%)
 Strand = Plus / Minus

                                                                        
Query: 463  tgacttgctgtagtgaatcttctcagctttcattagccccaatccgtgctctgcgctgat 522
            |||||||||||||||||||||||| ||||||||||| |||||||| |||||||| || ||
Sbjct: 2241 tgacttgctgtagtgaatcttctcggctttcattagacccaatccatgctctgcactaat 2182

                                                                        
Query: 523  gcttcctctgtggccagcagtccactcatagacaaatggttcaatttgtgccagaatatc 582
            ||| ||||| ||    |  |||||||| |||||||||||||||||||||||||| || | 
Sbjct: 2181 gctccctctctgtttggaggtccactcgtagacaaatggttcaatttgtgccagcatctt 2122

                        
Query: 583  gtcactgtactt 594
            ||| ||||||||
Sbjct: 2121 gtcgctgtactt 2110



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 377  gactgaggtagaaccttgtatgggtttagaattgagttagggtccagtaacttcttgatg 436
            ||||| || ||||||||||| ||||| || ||||| || ||||| || ||||||||||||
Sbjct: 2693 gactgtgggagaaccttgtaggggttcaggattgaatttgggtcgagcaacttcttgatg 2634

                             
Query: 437  gaagccattagctgcac 453
            |||||||| || |||||
Sbjct: 2633 gaagccatcagttgcac 2617
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  115 bits (58), Expect = 2e-22
 Identities = 100/114 (87%)
 Strand = Plus / Minus

                                                                           
Query: 463     tgacttgctgtagtgaatcttctcagctttcattagccccaatccgtgctctgcgctgat 522
               |||||||||||||||||||||||| ||||||||||| |||||||| |||||||| || ||
Sbjct: 4690440 tgacttgctgtagtgaatcttctcggctttcattagacccaatccatgctctgcactaat 4690381

                                                                     
Query: 523     gcttcctctgtggccagcagtccactcatagacaaatggttcaatttgtgccag 576
               ||| ||||| ||    |  |||||||| ||||||||||||||||||||||||||
Sbjct: 4690380 gctccctctctgtttggaggtccactcgtagacaaatggttcaatttgtgccag 4690327



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                           
Query: 377     gactgaggtagaaccttgtatgggtttagaattgagttagggtccagtaacttcttgatg 436
               ||||| || ||||||||||| ||||| || ||||| || ||||| || ||||||||||||
Sbjct: 4690892 gactgtgggagaaccttgtaggggttcaggattgaatttgggtcgagcaacttcttgatg 4690833

                                
Query: 437     gaagccattagctgcac 453
               |||||||| || |||||
Sbjct: 4690832 gaagccatcagttgcac 4690816
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>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0084L07
          Length = 127992

 Score =  115 bits (58), Expect = 2e-22
 Identities = 100/114 (87%)
 Strand = Plus / Minus

                                                                        
Query: 463  tgacttgctgtagtgaatcttctcagctttcattagccccaatccgtgctctgcgctgat 522
            |||||||||||||||||||||||| ||||||||||| |||||||| |||||||| || ||
Sbjct: 8350 tgacttgctgtagtgaatcttctcggctttcattagacccaatccatgctctgcactaat 8291

                                                                  
Query: 523  gcttcctctgtggccagcagtccactcatagacaaatggttcaatttgtgccag 576
            ||| ||||| ||    |  |||||||| ||||||||||||||||||||||||||
Sbjct: 8290 gctccctctctgtttggaggtccactcgtagacaaatggttcaatttgtgccag 8237



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 377  gactgaggtagaaccttgtatgggtttagaattgagttagggtccagtaacttcttgatg 436
            ||||| || ||||||||||| ||||| || ||||| || ||||| || ||||||||||||
Sbjct: 8802 gactgtgggagaaccttgtaggggttcaggattgaatttgggtcgagcaacttcttgatg 8743

                             
Query: 437  gaagccattagctgcac 453
            |||||||| || |||||
Sbjct: 8742 gaagccatcagttgcac 8726
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>dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0506C07
          Length = 123451

 Score =  115 bits (58), Expect = 2e-22
 Identities = 100/114 (87%)
 Strand = Plus / Minus

                                                                         
Query: 463   tgacttgctgtagtgaatcttctcagctttcattagccccaatccgtgctctgcgctgat 522
             |||||||||||||||||||||||| ||||||||||| |||||||| |||||||| || ||
Sbjct: 97813 tgacttgctgtagtgaatcttctcggctttcattagacccaatccatgctctgcactaat 97754

                                                                   
Query: 523   gcttcctctgtggccagcagtccactcatagacaaatggttcaatttgtgccag 576
             ||| ||||| ||    |  |||||||| ||||||||||||||||||||||||||
Sbjct: 97753 gctccctctctgtttggaggtccactcgtagacaaatggttcaatttgtgccag 97700



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                         
Query: 377   gactgaggtagaaccttgtatgggtttagaattgagttagggtccagtaacttcttgatg 436
             ||||| || ||||||||||| ||||| || ||||| || ||||| || ||||||||||||
Sbjct: 98265 gactgtgggagaaccttgtaggggttcaggattgaatttgggtcgagcaacttcttgatg 98206

                              
Query: 437   gaagccattagctgcac 453
             |||||||| || |||||
Sbjct: 98205 gaagccatcagttgcac 98189
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>ref|NM_202963.1| Arabidopsis thaliana electron carrier AT4G36400 transcript variant
            AT4G36400.2 mRNA, complete cds
          Length = 1997

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                        
Query: 380  tgaggtagaaccttgtatgggtttagaattgagttagggtccagtaacttcttgatggaa 439
            ||||| ||||| ||||| ||||| ||||||   || |||||||| ||||| || ||||||
Sbjct: 1677 tgaggaagaactttgtaagggttgagaattccctttgggtccagcaactttttaatggaa 1618

                   
Query: 440  gccatta 446
            |||||||
Sbjct: 1617 gccatta 1611
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>ref|NM_119803.2| Arabidopsis thaliana electron carrier AT4G36400 transcript variant
            AT4G36400.1 mRNA, complete cds
          Length = 1956

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                        
Query: 380  tgaggtagaaccttgtatgggtttagaattgagttagggtccagtaacttcttgatggaa 439
            ||||| ||||| ||||| ||||| ||||||   || |||||||| ||||| || ||||||
Sbjct: 1678 tgaggaagaactttgtaagggttgagaattccctttgggtccagcaactttttaatggaa 1619

                   
Query: 440  gccatta 446
            |||||||
Sbjct: 1618 gccatta 1612
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>emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 2
          Length = 198354

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                          
Query: 380    tgaggtagaaccttgtatgggtttagaattgagttagggtccagtaacttcttgatggaa 439
              ||||| ||||| ||||| ||||| ||||||   || |||||||| ||||| || ||||||
Sbjct: 168966 tgaggaagaactttgtaagggttgagaattccctttgggtccagcaactttttaatggaa 169025

                     
Query: 440    gccatta 446
              |||||||
Sbjct: 169026 gccatta 169032
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>emb|AL161589.2|ATCHRIV85 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 85
          Length = 198750

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                         
Query: 380   tgaggtagaaccttgtatgggtttagaattgagttagggtccagtaacttcttgatggaa 439
             ||||| ||||| ||||| ||||| ||||||   || |||||||| ||||| || ||||||
Sbjct: 81762 tgaggaagaactttgtaagggttgagaattccctttgggtccagcaactttttaatggaa 81703

                    
Query: 440   gccatta 446
             |||||||
Sbjct: 81702 gccatta 81696
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>gb|AY090301.1| Arabidopsis thaliana At4g36400/C7A10_960 mRNA, complete cds
          Length = 1122

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                        
Query: 380  tgaggtagaaccttgtatgggtttagaattgagttagggtccagtaacttcttgatggaa 439
            ||||| ||||| ||||| ||||| ||||||   || |||||||| ||||| || ||||||
Sbjct: 1103 tgaggaagaactttgtaagggttgagaattccctttgggtccagcaactttttaatggaa 1044

                   
Query: 440  gccatta 446
            |||||||
Sbjct: 1043 gccatta 1037
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>gb|AY058061.1| Arabidopsis thaliana At4g36400/C7A10_960 mRNA, complete cds
          Length = 2053

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                        
Query: 380  tgaggtagaaccttgtatgggtttagaattgagttagggtccagtaacttcttgatggaa 439
            ||||| ||||| ||||| ||||| ||||||   || |||||||| ||||| || ||||||
Sbjct: 1733 tgaggaagaactttgtaagggttgagaattccctttgggtccagcaactttttaatggaa 1674

                   
Query: 440  gccatta 446
            |||||||
Sbjct: 1673 gccatta 1667
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>dbj|AK117677.1| Arabidopsis thaliana mRNA, clone: RAFL17-33-P19
          Length = 1010

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 380 tgaggtagaaccttgtatgggtttagaattgagttagggtccagtaacttcttgatggaa 439
           ||||| ||||| ||||| ||||| ||||||   || |||||||| ||||| || ||||||
Sbjct: 298 tgaggaagaactttgtaagggttgagaattccctttgggtccagcaactttttaatggaa 357

                  
Query: 440 gccatta 446
           |||||||
Sbjct: 358 gccatta 364
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>dbj|AP006712.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17E09, TM0627,
             complete sequence
          Length = 101220

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 419   tccagtaacttcttgatggaagccattagctgcac 453
             ||||| || |||||||||||||||||||| |||||
Sbjct: 95927 tccagcaaattcttgatggaagccattagttgcac 95893
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>ref|XM_421271.1| PREDICTED: Gallus gallus similar to FLJ00353 protein (LOC423356),
           mRNA
          Length = 7209

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 477 gaatcttctcagctttcatta 497
           |||||||||||||||||||||
Sbjct: 550 gaatcttctcagctttcatta 530
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>emb|CR392350.11| Zebrafish DNA sequence from clone DKEY-61N21 in linkage group 5, complete
              sequence
          Length = 230648

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 158    agccaaaaaaggttcttattc 178
              |||||||||||||||||||||
Sbjct: 124392 agccaaaaaaggttcttattc 124372
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>gb|AC110747.3| Homo sapiens, clone RP11-103L16, complete sequence
          Length = 140919

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 246   atgtcaacaactggaatttta 266
             |||||||||||||||||||||
Sbjct: 70637 atgtcaacaactggaatttta 70657
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>emb|AL954311.13| Zebrafish DNA sequence from clone CH211-138M12 in linkage group 5,
              complete sequence
          Length = 168421

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 158    agccaaaaaaggttcttattc 178
              |||||||||||||||||||||
Sbjct: 106669 agccaaaaaaggttcttattc 106689
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>emb|AL691424.7| Mouse DNA sequence from clone RP23-219K12 on chromosome X, complete
              sequence
          Length = 194520

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 427    cttcttgatggaagccattag 447
              |||||||||||||||||||||
Sbjct: 145467 cttcttgatggaagccattag 145487
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>gb|AC120400.11| Mus musculus chromosome 1, clone RP24-351P4, complete sequence
          Length = 144055

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 252   acaactggaattttattgggtaca 275
             |||||| |||||||||||||||||
Sbjct: 43326 acaactagaattttattgggtaca 43349
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>ref|XM_422664.1| PREDICTED: Gallus gallus similar to AI325464 protein (LOC424853),
            mRNA
          Length = 1885

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 506  ccgtgctctgcgctgatgct 525
            ||||||||||||||||||||
Sbjct: 1490 ccgtgctctgcgctgatgct 1471
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>gb|AC149058.7| Mus musculus BAC clone RP23-338G5 from chromosome 7, complete sequence
          Length = 219369

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 518   ctgatgcttcctctgtggcc 537
             ||||||||||||||||||||
Sbjct: 53771 ctgatgcttcctctgtggcc 53752
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>ref|XM_803745.1| Trypanosoma cruzi strain CL Brener mucin TcMUCII
           (Tc00.1047053504787.20) partial mRNA
          Length = 687

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 acagacgcatctcttccatc 292
           ||||||||||||||||||||
Sbjct: 320 acagacgcatctcttccatc 301
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>gb|AC127369.4| Mus musculus BAC clone RP23-26A15 from 8, complete sequence
          Length = 211411

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    caaccacctgtgtaaactga 154
              ||||||||||||||||||||
Sbjct: 132262 caaccacctgtgtaaactga 132281
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>gb|AC116734.14| Mus musculus chromosome 7, clone RP23-359D11, complete sequence
          Length = 217741

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    gagttgtacatggccttaat 222
              ||||||||||||||||||||
Sbjct: 163237 gagttgtacatggccttaat 163256
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>gb|AC102705.10| Mus musculus, clone RP24-400C16, complete sequence
          Length = 135473

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 362   tccagtgacaatgcagactgaggt 385
             ||||||||||||| ||||||||||
Sbjct: 78112 tccagtgacaatgaagactgaggt 78089
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>gb|AC113194.8| Homo sapiens chromosome 8, clone RP11-1070A24, complete sequence
          Length = 166015

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 468   tgctgtagtgaatcttctca 487
             ||||||||||||||||||||
Sbjct: 12170 tgctgtagtgaatcttctca 12189
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>gb|AC100821.2| Homo sapiens chromosome 8, clone RP11-30L15, complete sequence
          Length = 183976

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 468    tgctgtagtgaatcttctca 487
              ||||||||||||||||||||
Sbjct: 161844 tgctgtagtgaatcttctca 161863
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>emb|AL691491.11| Mouse DNA sequence from clone RP23-426J14 on chromosome 4 Contains the
             5' end of the Pappa gene for pregnancy-associated plasma
             protein A and a Cpg island, complete sequence
          Length = 199017

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 545   cactcatagacaaatggttc 564
             ||||||||||||||||||||
Sbjct: 94371 cactcatagacaaatggttc 94352
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>dbj|AK157218.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830206P12 product:hypothetical
           Cytochrome c  heme-binding site containing protein, full
           insert sequence
          Length = 1836

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 362 tccagtgacaatgcagactgaggt 385
           ||||||||||||| ||||||||||
Sbjct: 22  tccagtgacaatgaagactgaggt 45
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>emb|CR354188.1| Gallus gallus finished cDNA, clone ChEST64j11
          Length = 1081

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 506 ccgtgctctgcgctgatgct 525
           ||||||||||||||||||||
Sbjct: 686 ccgtgctctgcgctgatgct 667
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 201      ctgagttgtacatggcctta 220
                ||||||||||||||||||||
Sbjct: 26684423 ctgagttgtacatggcctta 26684442



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 201      ctgagttgtacatggcctta 220
                ||||||||||||||||||||
Sbjct: 26646104 ctgagttgtacatggcctta 26646123
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 201      ctgagttgtacatggcctta 220
                ||||||||||||||||||||
Sbjct: 11964528 ctgagttgtacatggcctta 11964547



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 201      ctgagttgtacatggcctta 220
                ||||||||||||||||||||
Sbjct: 11947195 ctgagttgtacatggcctta 11947214
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>gb|AC074182.6| Homo sapiens BAC clone RP11-553G13 from 2, complete sequence
          Length = 190436

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    gctaagcaaccacctgtgta 148
              ||||||||||||||||||||
Sbjct: 101004 gctaagcaaccacctgtgta 100985
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>dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0702C09
          Length = 138203

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   ctgagttgtacatggcctta 220
             ||||||||||||||||||||
Sbjct: 95950 ctgagttgtacatggcctta 95969



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   ctgagttgtacatggcctta 220
             ||||||||||||||||||||
Sbjct: 57631 ctgagttgtacatggcctta 57650
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>dbj|AP005743.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0543C11
          Length = 159075

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   ctgagttgtacatggcctta 220
             ||||||||||||||||||||
Sbjct: 61806 ctgagttgtacatggcctta 61825



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   ctgagttgtacatggcctta 220
             ||||||||||||||||||||
Sbjct: 44473 ctgagttgtacatggcctta 44492
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>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0033D24
          Length = 186132

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   ctgagttgtacatggcctta 220
             ||||||||||||||||||||
Sbjct: 27765 ctgagttgtacatggcctta 27784
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>emb|AL929305.4| Zebrafish DNA sequence from clone DKEY-110K5, complete sequence
          Length = 166110

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 522   tgcttcctctgtggccagca 541
             ||||||||||||||||||||
Sbjct: 14659 tgcttcctctgtggccagca 14640
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>gb|AY555143.1| Zea may BAC clone c573L14, complete sequence
          Length = 144792

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 203   gagttgtacatggccttaattgat 226
             |||||||||||||||| |||||||
Sbjct: 64781 gagttgtacatggcctaaattgat 64758
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>emb|BX004976.7| Zebrafish DNA sequence from clone CH211-276C7, complete sequence
          Length = 151137

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 241   gtttgatgtcaacaactggaattt 264
             ||||||| ||||||||||||||||
Sbjct: 56415 gtttgatatcaacaactggaattt 56392
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>dbj|AP003071.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-554A11, complete
             sequence
          Length = 191898

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 525   ttcctctgtggccagcagtccactcata 552
             |||||||||||||||| ||||| |||||
Sbjct: 74849 ttcctctgtggccagctgtccagtcata 74876
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>emb|AL844586.5| Mouse DNA sequence from clone RP23-259N17 on chromosome 2, complete
             sequence
          Length = 181467

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 362   tccagtgacaatgcagactgaggt 385
             ||||||||||||| ||||||||||
Sbjct: 11877 tccagtgacaatgaagactgaggt 11854


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,246,171
Number of Sequences: 3902068
Number of extensions: 5246171
Number of successful extensions: 96803
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96626
Number of HSP's gapped (non-prelim): 176
length of query: 602
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 579
effective length of database: 17,143,297,704
effective search space: 9925969370616
effective search space used: 9925969370616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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