>Y396_MYCPN (P75387) Hypothetical protein MG277 homolog (F11_orf887)|
          Length = 971

 Score = 34.3 bits (77), Expect = 0.35
 Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
 Frame = -3

Query: 573 LKVLPVLLFGAKYGSLITVWRFLATGFFTSFTLPKLYISYSTQIHMIAENLIDRA--LEA 400
           L  +  L F +  G ++ V+ F+   F  +  +    I+  T   +   N+ + A  +E+
Sbjct: 551 LSAISSLAFFSAVGGVVDVFSFVGIFFVVAVNI----INLITLAELFLRNIKNNASIVES 606

Query: 399 WKSCPRKKFVAGTAVAVCWNLFSVKTRFLAAFVSVVILRYNHQIAGVM 256
           WK C ++ F       +CW         L+A V + +  Y  Q  G +
Sbjct: 607 WKLCLKRSFFTMIETHICW--------LLSALVVIYLSNYQVQQLGTL 646

>RTN1_YEAST (Q04947) Reticulon-like protein 1|
          Length = 295

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = -3

Query: 606 QVIFSGNPSTTLKVLPVLLFGAKYGSLITVWRFLATGFFTSFTLPKLYISYSTQI 442
           + +F+  P  T K    L    K+ S  ++W  +      +FTLP +Y SY  +I
Sbjct: 117 KTVFAQVPKHTFKTAVALFLLHKFFSWFSIWTIVFVADIFTFTLPVIYHSYKHEI 171

>CBLC_HUMAN (Q9ULV8) Signal transduction protein CBL-C (SH3-binding protein|
           CBL-C) (CBL-3) (RING finger protein 57)
          Length = 474

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +3

Query: 195 CGHLLI*CSLSSWQHSTS 248
           CGHLL  C L++WQHS S
Sbjct: 366 CGHLLCSCCLAAWQHSDS 383

>Y277_MYCGE (Q49409) Hypothetical protein MG277|
          Length = 970

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
 Frame = -3

Query: 573 LKVLPVLLFGAKYGSLITVWRFLATGFFTSFTLPKLYISYSTQIHMIAENLIDRALEAWK 394
           L V+  L+  +  G ++ V+ F+   F  +  L  L       +  I  N     +E+WK
Sbjct: 550 LSVVSSLVIFSAVGGVVDVFSFVGIFFVIAINLINLLNLGELFLRNIRNNA--SIIESWK 607

Query: 393 SCPRKKFVAGTAVAVCWNLFSVKTRFLAAFVSVVILRYN-HQIAGVM 256
            C ++ F A     + W         ++A V + +  Y   Q+A +M
Sbjct: 608 LCLKRSFFANLEFHITW--------LISALVVIYLSNYQVQQLANLM 646

>WNT8_XENLA (P28026) Protein Wnt-8 precursor (XWnt-8)|
          Length = 358

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
 Frame = -3

Query: 582 STTLKVLPVLLFGAKY--GSLITVWRFLATGFFTSFTLPKLYISYSTQIHMIAENLIDR- 412
           +TTL +L  LL    +   S  +V  FL TG       PK Y++YS  + + A+N I+  
Sbjct: 3   NTTLFILATLLIFCPFFTASAWSVNNFLMTG-------PKAYLTYSASVAVGAQNGIEEC 55

Query: 411 ----ALEAWKSCPRKKFVAGT 361
               A E W +CP       T
Sbjct: 56  KYQFAWERW-NCPESTLQLAT 75

>Y166_METJA (Q57630) UPF0204 protein MJ0166|
          Length = 255

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
 Frame = -3

Query: 672 EKDF-LRAAGAVLPIANSIISTAQVIFSGNPSTTLKVLPVLLFGAKYGSLITVWRFLATG 496
           EK++ L+ AG +  IA S++ T   + S N     KV  +   G  Y    T    L   
Sbjct: 142 EKEWILKEAGEI--IAKSVLETIDAMKSKNYDK--KVRAIGFGGGHYAPKFTKLA-LEDK 196

Query: 495 FFTSFTLPKLYISYSTQI--HMIAENLIDRALEAWKSC 388
           ++  + +PK Y S S  +   +I++  +D+AL  WK C
Sbjct: 197 YYFGYLVPK-YASVSEDVLNQLISKMEVDKALIDWKGC 233

>IBBWT_MEDSA (P16346) Bowman-Birk type wound-induced trypsin inhibitor|
          Length = 58

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
 Frame = +1

Query: 262 PCDLMIVPQYHY*NEG--CQEAC---LNTKQIPAHCHCCARNEF 378
           PC   I PQ    + G  C  AC   L TK IP  CHC     F
Sbjct: 9   PCTRSIPPQCRCTDIGETCHSACKTCLCTKSIPPQCHCADITNF 52


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,111,960
Number of Sequences: 219361
Number of extensions: 1964876
Number of successful extensions: 4641
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4640
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)