ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags7e22 |
|---|---|
| Clone Library Name | barley_pub |
>SRPR_DROME (Q9U5L1) Signal recognition particle receptor alpha subunit homolog| (SR-alpha) (Docking protein alpha) (DP-alpha) (GTP-binding protein) Length = 614 Score = 178 bits (451), Expect = 1e-44 Identities = 88/123 (71%), Positives = 104/123 (84%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DVVLVDTAGRMQDNEPLMR+LSKLI +N PDLVLFV ALVGN+AVDQL KFNQ LAD S Sbjct: 492 DVVLVDTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYS 551 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + +IDGI+LTKFDTIDDKVGAA+SM YI+G P++FVG GQ+Y DLK +NV ++V + Sbjct: 552 SNENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYADLKAINVNAVVNS 611 Query: 229 LLK 221 L+K Sbjct: 612 LMK 614
>SRPR_MOUSE (Q9DBG7) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 636 Score = 172 bits (436), Expect = 7e-43 Identities = 87/123 (70%), Positives = 101/123 (82%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFV ALVGN+AVDQL KFN+ LAD S Sbjct: 513 DVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHS 572 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 T RLIDGI+LTKFDTIDDKVGAA+SM YI+ P++FVG GQ+Y DL+ LN K++V Sbjct: 573 MAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAA 632 Query: 229 LLK 221 L+K Sbjct: 633 LMK 635
>SRPR_HUMAN (P08240) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 638 Score = 172 bits (436), Expect = 7e-43 Identities = 87/123 (70%), Positives = 101/123 (82%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFV ALVGN+AVDQL KFN+ LAD S Sbjct: 515 DVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHS 574 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 T RLIDGI+LTKFDTIDDKVGAA+SM YI+ P++FVG GQ+Y DL+ LN K++V Sbjct: 575 MAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAA 634 Query: 229 LLK 221 L+K Sbjct: 635 LMK 637
>SRPR_CANFA (P06625) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 638 Score = 172 bits (436), Expect = 7e-43 Identities = 87/123 (70%), Positives = 101/123 (82%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFV ALVGN+AVDQL KFN+ LAD S Sbjct: 515 DVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHS 574 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 T RLIDGI+LTKFDTIDDKVGAA+SM YI+ P++FVG GQ+Y DL+ LN K++V Sbjct: 575 MAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAA 634 Query: 229 LLK 221 L+K Sbjct: 635 LMK 637
>Y291_METJA (Q57739) Probable signal recognition particle protein MJ0291| Length = 409 Score = 98.2 bits (243), Expect = 2e-20 Identities = 56/121 (46%), Positives = 74/121 (61%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DVVL DTAGR N LM + K++ + KPDLV+FV AL GNDAV Q +FN+ + Sbjct: 286 DVVLADTAGRQATNVNLMEEIKKVVRVTKPDLVIFVGDALTGNDAVYQAEEFNRAVN--- 342 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 IDGI+LTK D D K GAALS+ Y G P++++G GQ Y DL + + +V+ Sbjct: 343 -------IDGIILTKVDA-DAKGGAALSIGYAIGKPILYLGVGQRYQDLIEFDADWMVRK 394 Query: 229 L 227 L Sbjct: 395 L 395
>SRPR_YEAST (P32916) Signal recognition particle receptor alpha subunit homolog| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 621 Score = 97.8 bits (242), Expect = 2e-20 Identities = 50/122 (40%), Positives = 74/122 (60%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 D+VL+DTAGR ++ LM L + KPD ++ V ALVG D+V Q FN Sbjct: 505 DIVLMDTAGRRHNDPTLMSPLKSFADQAKPDKIIMVGEALVGTDSVQQAKNFNDAFGK-- 562 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 R +D +++K DT+ + +G ++MVY +G P++FVG GQ+YTDL+ L+VK V T Sbjct: 563 ----GRNLDFFIISKCDTVGEMLGTMVNMVYATGIPILFVGVGQTYTDLRTLSVKWAVNT 618 Query: 229 LL 224 L+ Sbjct: 619 LM 620
>SRP54_STRMU (Q54431) Signal recognition particle protein (Fifty-four homolog)| Length = 516 Score = 79.0 bits (193), Expect = 1e-14 Identities = 43/113 (38%), Positives = 68/113 (60%) Frame = -2 Query: 598 NKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLA 419 N++D VL+DTAGR+Q +E LM L + L P+ +L V +++G +A + +FNQ+L Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242 Query: 418 DLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLK 260 + G++LTK D D + GAALS+ I+G P+ F G G+ TD++ Sbjct: 243 ----------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIE 284
>SRP54_HELPY (P56005) Signal recognition particle protein (Fifty-four homolog)| Length = 448 Score = 78.2 bits (191), Expect = 2e-14 Identities = 51/152 (33%), Positives = 82/152 (53%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DV+LVD+AGR+ ++ LM+ L ++ + P VL+V AL G D V N FN+++ Sbjct: 177 DVLLVDSAGRLAIDKELMQELKEVKEILNPHEVLYVADALSGQDGVKSANTFNEEIG--- 233 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + G++L+KFD+ D K G AL + Y G P+ F+G G+ DL + IV Sbjct: 234 -------VSGVVLSKFDS-DSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIVGR 285 Query: 229 LLK*NGSSTCRAPICAAYQRVSVISPNIPRDI 134 L+ G+ + A + SV++PN +D+ Sbjct: 286 LM---GAGDI---VSLAEKTASVLNPNEAKDL 311
>SRP54_HELPJ (Q9ZK62) Signal recognition particle protein (Fifty-four homolog)| Length = 448 Score = 77.8 bits (190), Expect = 2e-14 Identities = 51/152 (33%), Positives = 82/152 (53%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DV++VD+AGR+ ++ LM+ L ++ + P VL+V AL G D V N FN+++ Sbjct: 177 DVLIVDSAGRLAIDKELMQELKEVKEVLNPHEVLYVADALSGQDGVKSANTFNEEIG--- 233 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + G++L+KFD+ D K G AL + Y G P+ F+G G+ DL + IV Sbjct: 234 -------VSGVVLSKFDS-DSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFMPERIVGR 285 Query: 229 LLK*NGSSTCRAPICAAYQRVSVISPNIPRDI 134 L+ G+ I A + SV++PN +D+ Sbjct: 286 LM---GAGDI---ISLAEKTASVLNPNEAKDL 311
>DOCK_SULAC (P27414) Probable signal recognition particle protein (Docking| protein) (P41) Length = 369 Score = 75.9 bits (185), Expect = 8e-14 Identities = 41/109 (37%), Positives = 62/109 (56%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DVVL+DTAGRM + L+ L +++ + KPD + + +L G+DA++Q F + Sbjct: 257 DVVLIDTAGRMHIDSDLVEELKRVLRIAKPDFRILILDSLAGSDALEQARHFENNVG--- 313 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDL 263 D ++LTK D D K G ALS+ Y PV+++G GQ+Y DL Sbjct: 314 -------YDAVILTKVDA-DAKGGIALSLAYELKKPVVYMGVGQNYDDL 354
>SRP54_BUCAP (Q8K9F7) Signal recognition particle protein (Fifty-four homolog)| Length = 450 Score = 73.2 bits (178), Expect = 5e-13 Identities = 39/122 (31%), Positives = 71/122 (58%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 D++L+DTAGR+ N +M ++ + N++KP L + +++G DA++ KF+ L+ Sbjct: 185 DLLLIDTAGRLHINTEMMNEINTIQNISKPIETLLIVDSMMGQDAINIAKKFSASLS--- 241 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 I GI++TK D+ D + G ALS+ +I+G P+ F+G G+ L+ + + I Sbjct: 242 -------ISGIVITKTDS-DARSGVALSIRHITGKPIKFIGTGEKLHQLEPFHPERIADR 293 Query: 229 LL 224 +L Sbjct: 294 IL 295
>SRP54_BUCAI (P57473) Signal recognition particle protein (Fifty-four homolog)| Length = 451 Score = 72.4 bits (176), Expect = 9e-13 Identities = 41/122 (33%), Positives = 68/122 (55%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DV+L+DTAGR+ ++ +M + ++ ++K L + +++G DA++ FN L Sbjct: 185 DVLLIDTAGRLHIDKKMMNEIQQIQVISKAIETLLIVDSMMGQDAINMAKIFNNDL---- 240 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 LI GI+LTK D D + G ALSM YI+G P+ F+G G+ L+ + + I Sbjct: 241 ------LISGIILTKTDG-DSRSGIALSMRYITGKPIKFIGTGEKIISLEPFHPERIADR 293 Query: 229 LL 224 +L Sbjct: 294 IL 295
>SR543_HORVU (P49970) Signal recognition particle 54 kDa protein 3 (SRP54)| Length = 493 Score = 71.6 bits (174), Expect = 2e-12 Identities = 42/124 (33%), Positives = 62/124 (50%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLAD 416 KSD++++DT+GR L + ++ KPDLV+FV +G A DQ F Q + Sbjct: 182 KSDLIIIDTSGRHMQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSAS- 240 Query: 415 LSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 236 + +++TK D K G ALS V + SPV+F+G G+ D NV+ V Sbjct: 241 ---------VGAVIVTKLDG-HAKGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFV 290 Query: 235 KTLL 224 LL Sbjct: 291 ARLL 294
>SRP54_MYCMY (Q01442) Signal recognition particle protein (Fifty-four homolog)| Length = 447 Score = 71.6 bits (174), Expect = 2e-12 Identities = 41/125 (32%), Positives = 67/125 (53%) Frame = -2 Query: 598 NKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLA 419 N DVV++DTAGR+Q ++ LM+ L L P+ +L V + G + ++ N+FN KL Sbjct: 182 NNFDVVILDTAGRLQVDQVLMKELDNLKKKTSPNEILLVVDGMSGQEIINVTNEFNDKLK 241 Query: 418 DLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSI 239 + G+++TK D D + GA LS+ Y++ P+ F+G G+ Y L K + Sbjct: 242 ----------LSGVVVTKLDG-DARGGATLSISYLTKLPIKFIGEGEGYNALAAFYPKRM 290 Query: 238 VKTLL 224 L+ Sbjct: 291 ADRLM 295
>SR543_ARATH (P49967) Signal recognition particle 54 kDa protein 3 (SRP54)| Length = 495 Score = 70.9 bits (172), Expect = 3e-12 Identities = 41/122 (33%), Positives = 64/122 (52%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 D+++VDT+GR + L + ++ KPDLV+FV + +G A DQ F Q +A Sbjct: 185 DLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVA--- 241 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + +++TK D K G ALS V + SPV+F+G G+ + + +VK V Sbjct: 242 -------VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 293 Query: 229 LL 224 LL Sbjct: 294 LL 295
>SRP54_RICCN (Q92J55) Signal recognition particle protein (Fifty-four homolog)| Length = 449 Score = 70.9 bits (172), Expect = 3e-12 Identities = 41/122 (33%), Positives = 68/122 (55%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DVV+ DTAGR Q ++ +M + + +P L V ++ G DAV + FN+KLA Sbjct: 186 DVVIYDTAGRTQIDKAMMEEALAIKKIVEPTETLLVIDSMTGQDAVVTASSFNEKLA--- 242 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 I G++L++ D D K GAALS+ YI+ P+ F+ G++ DL++ + + + Sbjct: 243 -------ISGLILSRIDG-DSKGGAALSVKYITKKPIKFLSSGENLIDLEEFDAERLASR 294 Query: 229 LL 224 +L Sbjct: 295 IL 296
>SRP54_METKA (Q8TUY9) Signal recognition 54 kDa protein (SRP54)| Length = 447 Score = 70.9 bits (172), Expect = 3e-12 Identities = 46/125 (36%), Positives = 69/125 (55%) Frame = -2 Query: 598 NKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLA 419 ++ DVV+VDTAGR + +E L+ L ++ +P VL V A VG A D F++ + Sbjct: 180 DECDVVIVDTAGRDRLSEDLIDELREMAERIEPHEVLLVLDATVGQKAGDHAEAFHEAVQ 239 Query: 418 DLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSI 239 + G+++TK DT K G ALS V +G+P+ FVG G+ DL++ N +S Sbjct: 240 ----------LTGVVITKLDTA-AKGGGALSAVARTGAPIKFVGTGERVDDLEEFNPRSF 288 Query: 238 VKTLL 224 V LL Sbjct: 289 VARLL 293
>SRP54_THEAQ (O07347) Signal recognition particle protein (Fifty-four homolog)| Length = 429 Score = 70.9 bits (172), Expect = 3e-12 Identities = 40/104 (38%), Positives = 62/104 (59%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 D++LVDTAGR+Q +EPLM L++L + PD VL V A+ G +A+ F++K+ Sbjct: 181 DLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARAFDEKVG--- 237 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQ 278 + G++LTK D D + GAALS +++G P+ F G + Sbjct: 238 -------VTGLVLTKLDG-DARGGAALSARHVTGKPIYFAGVSE 273
>SR542_LYCES (P49972) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 499 Score = 70.5 bits (171), Expect = 4e-12 Identities = 41/122 (33%), Positives = 64/122 (52%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 D+++VDT+GR + L + ++ KPDLV+FV + +G A DQ F Q +A Sbjct: 185 DLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVA--- 241 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + +++TK D K G ALS V + SPV+F+G G+ + + +VK V Sbjct: 242 -------VGAVIVTKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 293 Query: 229 LL 224 LL Sbjct: 294 LL 295
>SR541_LYCES (P49971) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 496 Score = 70.1 bits (170), Expect = 5e-12 Identities = 41/122 (33%), Positives = 64/122 (52%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 D+++VDT+GR + L + ++ KPDLV+FV + +G A DQ F Q +A Sbjct: 186 DLIIVDTSGRHKQEAALFEEMRQVSEAQKPDLVIFVMDSSIGQAAFDQAQAFRQSVA--- 242 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + +++TK D K G ALS V + SPV+F+G G+ + + +VK V Sbjct: 243 -------VGAVIVTKMDG-HAKGGGALSRVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 294 Query: 229 LL 224 LL Sbjct: 295 LL 296
>SRP54_BUCBP (Q89AE4) Signal recognition particle protein (Fifty-four homolog)| Length = 450 Score = 69.7 bits (169), Expect = 6e-12 Identities = 37/122 (30%), Positives = 67/122 (54%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DV+L+DTAGR+Q ++ +M L + N++ P FV A+ G D+++ +N+FN+ L Sbjct: 185 DVLLIDTAGRLQIDKKMMNELLDVYNISHPIETFFVADAMFGQDSINVINEFNKYLP--- 241 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + ++TK D+ D + G LS+ Y++ P+ F+G G+ +L+ I Sbjct: 242 -------VSSFIITKTDS-DTRAGIILSIKYLTKKPIKFIGTGEKLEELELFYPDRIASR 293 Query: 229 LL 224 +L Sbjct: 294 IL 295
>SR542_HORVU (P49969) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 497 Score = 69.3 bits (168), Expect = 8e-12 Identities = 40/123 (32%), Positives = 63/123 (51%) Frame = -2 Query: 592 SDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADL 413 SD++++DT+GR + L + ++ KPDLV+FV +G A DQ F Q + Sbjct: 184 SDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSAS-- 241 Query: 412 STVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVK 233 + +++TK D K G ALS V + SPV+F+G G+ + + +VK V Sbjct: 242 --------VGAVIITKLDG-HAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVS 292 Query: 232 TLL 224 LL Sbjct: 293 RLL 295
>SR541_HORVU (P49968) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 497 Score = 69.3 bits (168), Expect = 8e-12 Identities = 40/123 (32%), Positives = 63/123 (51%) Frame = -2 Query: 592 SDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADL 413 SD++++DT+GR + L + ++ KPDLV+FV +G A DQ F Q + Sbjct: 184 SDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSAS-- 241 Query: 412 STVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVK 233 + +++TK D K G ALS V + SPV+F+G G+ + + +VK V Sbjct: 242 --------VGAVIITKLDG-HAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVS 292 Query: 232 TLL 224 LL Sbjct: 293 RLL 295
>SRP54_SYNY3 (P74214) Signal recognition particle protein (Fifty-four homolog)| Length = 482 Score = 68.9 bits (167), Expect = 1e-11 Identities = 41/110 (37%), Positives = 63/110 (57%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 D VL+DTAGR+Q + +M L+++ + KPD L V A+ G +A + + F++++ Sbjct: 184 DTVLIDTAGRLQIDPQMMAELAEIKQVVKPDDTLLVVDAMTGQEAANLTHTFHEQIG--- 240 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLK 260 I G +LTK D D + GAALS+ ISG P+ FVG G+ L+ Sbjct: 241 -------ITGAILTKLDG-DTRGGAALSVRQISGQPIKFVGVGEKVEALQ 282
>SRP54_RICPR (Q9ZDZ0) Signal recognition particle protein (Fifty-four homolog)| Length = 449 Score = 67.8 bits (164), Expect = 2e-11 Identities = 40/122 (32%), Positives = 64/122 (52%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DVV+ DTAGR+Q + +M + + P L V ++ G DAV F++KL Sbjct: 186 DVVIYDTAGRIQIDNVMMEEALAIKKILNPTETLLVIDSMTGQDAVITAKTFSEKLE--- 242 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 I G++L++ D D K GAALS+ Y + P+ F+ G+ TDL++ N + + Sbjct: 243 -------ISGLILSRIDG-DTKGGAALSVKYFTQKPIKFLSSGEKLTDLEEFNAERLASR 294 Query: 229 LL 224 +L Sbjct: 295 IL 296
>SRP54_ECOLI (P0AGD7) Signal recognition particle protein (Fifty-four homolog)| (p48) Length = 453 Score = 66.6 bits (161), Expect = 5e-11 Identities = 42/122 (34%), Positives = 65/122 (53%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DV+LVDTAGR+ +E +M + ++ P LFV A+ G DA + FN+ L Sbjct: 185 DVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALP--- 241 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + G++LTK D D + GAALS+ +I+G P+ F+G G+ L+ + I Sbjct: 242 -------LTGVVLTKVDG-DARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASR 293 Query: 229 LL 224 +L Sbjct: 294 IL 295
>SRP54_ECOL6 (P0AGD8) Signal recognition particle protein (Fifty-four homolog)| Length = 453 Score = 66.6 bits (161), Expect = 5e-11 Identities = 42/122 (34%), Positives = 65/122 (53%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DV+LVDTAGR+ +E +M + ++ P LFV A+ G DA + FN+ L Sbjct: 185 DVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALP--- 241 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + G++LTK D D + GAALS+ +I+G P+ F+G G+ L+ + I Sbjct: 242 -------LTGVVLTKVDG-DARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASR 293 Query: 229 LL 224 +L Sbjct: 294 IL 295
>SRP54_ECO57 (P0AGD9) Signal recognition particle protein (Fifty-four homolog)| Length = 453 Score = 66.6 bits (161), Expect = 5e-11 Identities = 42/122 (34%), Positives = 65/122 (53%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DV+LVDTAGR+ +E +M + ++ P LFV A+ G DA + FN+ L Sbjct: 185 DVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALP--- 241 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + G++LTK D D + GAALS+ +I+G P+ F+G G+ L+ + I Sbjct: 242 -------LTGVVLTKVDG-DARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASR 293 Query: 229 LL 224 +L Sbjct: 294 IL 295
>SRP54_ENTHI (O15821) Signal recognition particle 54 kDa protein (SRP54)| Length = 487 Score = 66.2 bits (160), Expect = 7e-11 Identities = 35/124 (28%), Positives = 66/124 (53%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLAD 416 K+D++LVDT+GR + ++ L + + + + KPD ++FV +G A Q F + Sbjct: 183 KNDIILVDTSGRHKQDKELFKEMQSVRDAIKPDSIIFVMDGAIGQAAFGQAKAFKDAVE- 241 Query: 415 LSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 236 + +++TK D G ALS V + SP++F+G G+ ++++ + +S V Sbjct: 242 ---------VGSVIITKLDG-HSNGGGALSAVAATKSPIIFIGTGEKVNEIEEFDAESFV 291 Query: 235 KTLL 224 + LL Sbjct: 292 RQLL 295
>SR542_ARATH (P49966) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 495 Score = 66.2 bits (160), Expect = 7e-11 Identities = 38/122 (31%), Positives = 62/122 (50%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 D+++VDT+GR + L + ++ KPDLV+FV + +G A +Q F Q +A Sbjct: 185 DLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQTVA--- 241 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + +++TK D K G LS V + SPV+F+G G+ + + + K V Sbjct: 242 -------VGAVIITKMDG-HAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSR 293 Query: 229 LL 224 LL Sbjct: 294 LL 295
>SRP54_SYNP7 (Q55311) Signal sequence-binding protein| Length = 485 Score = 65.9 bits (159), Expect = 9e-11 Identities = 39/122 (31%), Positives = 65/122 (53%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 D V+VDTAGR+Q + +M L+++ P VL V +++G +A F++++ Sbjct: 184 DTVIVDTAGRLQIDTEMMEELAQVKEAIAPHEVLLVVDSMIGQEAASLTRSFHERIG--- 240 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 I G +LTK D D + GAALS+ +SG P+ FVG G+ L+ + + + Sbjct: 241 -------ITGAILTKLDG-DSRGGAALSIRRVSGQPIKFVGLGEKVEALQPFHPERMASR 292 Query: 229 LL 224 +L Sbjct: 293 IL 294
>SR541_ARATH (P37106) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 479 Score = 65.9 bits (159), Expect = 9e-11 Identities = 38/124 (30%), Positives = 65/124 (52%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLAD 416 K D+++VDT+GR + L + ++ +PDLV+FV + +G A +Q F + ++ Sbjct: 183 KCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVS- 241 Query: 415 LSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 236 + +++TK D K G ALS V + SPV+F+G G+ + + +VK V Sbjct: 242 ---------VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 291 Query: 235 KTLL 224 LL Sbjct: 292 SRLL 295
>SRP54_AQUAE (O67615) Signal recognition particle protein (Fifty-four homolog)| Length = 454 Score = 65.5 bits (158), Expect = 1e-10 Identities = 36/122 (29%), Positives = 66/122 (54%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 D +L+DTAGR+ +E LM+ L ++ + P +L+V A+ G A++ F+++L Sbjct: 179 DYLLLDTAGRLHVDEELMKELQEIKEVTNPSEILYVADAMQGQTALETAKTFHERLG--- 235 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + G+++TK D D + G ALS+ + G P+ F+G G+ D++ I + Sbjct: 236 -------LTGVVITKMDG-DARGGLALSVKEVLGVPIKFIGVGEKIEDIEPFYPDRIAQR 287 Query: 229 LL 224 +L Sbjct: 288 IL 289
>SRP54_SULSO (Q97ZE7) Signal recognition 54 kDa protein (SRP54)| Length = 447 Score = 65.5 bits (158), Expect = 1e-10 Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Frame = -2 Query: 598 NKSDVVLVDTAGRMQDNEP--LMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQK 425 NK D+++VDTAGR E L+ + ++ ++ KPD V+ V A +G A D ++F+Q Sbjct: 177 NKMDIIIVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQA 236 Query: 424 LADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVK 245 I +++TK D K G ALS V +G+ + F+G G+ +L+ N K Sbjct: 237 SP----------IGSVIITKMDGTA-KGGGALSAVVATGATIKFIGTGEKIDELETFNAK 285 Query: 244 SIVKTLL 224 V +L Sbjct: 286 RFVSRIL 292
>SR54C_ARATH (P37107) Signal recognition particle 54 kDa protein, chloroplast| precursor (SRP54) (54 chloroplast protein) (54CP) (FFC) Length = 564 Score = 65.1 bits (157), Expect = 1e-10 Identities = 41/113 (36%), Positives = 60/113 (53%) Frame = -2 Query: 598 NKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLA 419 N DVV++DTAGR+Q ++ +M L + P VL V A+ G +A + FN ++ Sbjct: 257 NNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIG 316 Query: 418 DLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLK 260 I G +LTK D D + GAALS+ +SG P+ VG G+ DL+ Sbjct: 317 ----------ITGAILTKLDG-DSRGGAALSVKEVSGKPIKLVGRGERMEDLE 358
>SRP54_MYCTU (P66844) Signal recognition particle protein (Fifty-four homolog)| Length = 525 Score = 64.7 bits (156), Expect = 2e-10 Identities = 40/108 (37%), Positives = 58/108 (53%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DVV+VDTAGR+ +E LM + + + PD VLFV A++G DAV F + + Sbjct: 191 DVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAAFGEGVG--- 247 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTD 266 G+ LTK D D + GAALS+ ++G P++F G+ D Sbjct: 248 -------FTGVALTKLDG-DARGGAALSVREVTGVPILFASTGEKLED 287
>SRP54_MYCBO (P66845) Signal recognition particle protein (Fifty-four homolog)| Length = 525 Score = 64.7 bits (156), Expect = 2e-10 Identities = 40/108 (37%), Positives = 58/108 (53%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DVV+VDTAGR+ +E LM + + + PD VLFV A++G DAV F + + Sbjct: 191 DVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAAFGEGVG--- 247 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTD 266 G+ LTK D D + GAALS+ ++G P++F G+ D Sbjct: 248 -------FTGVALTKLDG-DARGGAALSVREVTGVPILFASTGEKLED 287
>SRP54_YEAST (P20424) Signal recognition particle 54 kDa protein homolog (SRP54)| Length = 541 Score = 64.3 bits (155), Expect = 3e-10 Identities = 39/124 (31%), Positives = 68/124 (54%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLAD 416 K D+++VDT+GR E L + + ++ N+ KP+ + V A +G A +Q +K ++ +D Sbjct: 191 KFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIG-QAAEQQSKAFKESSD 249 Query: 415 LSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 236 I+LTK D + G A+S V + +P++F+G G+ DL+K + KS + Sbjct: 250 FG---------AIILTKMDG-HARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFI 299 Query: 235 KTLL 224 LL Sbjct: 300 SKLL 303
>SRP54_METJA (Q57565) Signal recognition 54 kDa protein (SRP54)| Length = 451 Score = 63.9 bits (154), Expect = 3e-10 Identities = 36/124 (29%), Positives = 64/124 (51%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLAD 416 K+DV+++DTAGR ++ + L+ + ++ + PD ++ V +G A Q F + + + Sbjct: 181 KADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQAGIQAKAFKEAVGE 240 Query: 415 LSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 236 I I++TK D K G ALS V + +P+ F+G G+ DL+ + K + Sbjct: 241 ---------IGSIIVTKLDG-SAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFI 290 Query: 235 KTLL 224 LL Sbjct: 291 SRLL 294
>SRP54_PYRAB (Q9V1E8) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 63.9 bits (154), Expect = 3e-10 Identities = 41/122 (33%), Positives = 63/122 (51%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 D+++VDTAGR ++ + L+ + + N KP V+ V +G A +NQ LA Sbjct: 184 DLIIVDTAGRHKEEKDLIEEMRMISNEIKPHEVILVIDGTIGQQA------YNQALAFKE 237 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 P I I++TK D+ K G ALS V +G+P+ F+G G+ DL+ + V Sbjct: 238 ATP----IGSIIVTKLDS-SAKGGGALSAVAATGAPIKFIGTGEKIDDLEPFDPARFVSR 292 Query: 229 LL 224 LL Sbjct: 293 LL 294
>SRP54_PYRFU (Q8U070) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 63.5 bits (153), Expect = 4e-10 Identities = 39/122 (31%), Positives = 64/122 (52%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 D+++VDTAGR ++++ L+ + ++ N+ P V+ V +G A +NQ LA Sbjct: 184 DIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIGQQA------YNQALAFKE 237 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 P I I++TK D K G ALS V +G+P+ F+G G+ D++ + V Sbjct: 238 ATP----IGSIIVTKLDG-SAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSR 292 Query: 229 LL 224 LL Sbjct: 293 LL 294
>SRP54_BACSU (P37105) Signal recognition particle protein (Fifty-four homolog)| Length = 446 Score = 63.5 bits (153), Expect = 4e-10 Identities = 36/122 (29%), Positives = 65/122 (53%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 D V++DTAGR+ + LM L+ + + P+ + V ++ G DAV+ FN++L Sbjct: 186 DYVILDTAGRLHIDHELMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLG--- 242 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + G++LTK D D + GAALS+ ++ +P+ F G G+ L+ + + + Sbjct: 243 -------LTGVVLTKLDG-DTRGGAALSIRAVTNTPIKFAGLGEKLDALEPFHPERMASR 294 Query: 229 LL 224 +L Sbjct: 295 IL 296
>SRP54_PYRKO (Q5JJC8) Signal recognition 54 kDa protein (SRP54)| Length = 448 Score = 62.4 bits (150), Expect = 1e-09 Identities = 40/122 (32%), Positives = 63/122 (51%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DV++VD+AGR ++ + L+ + ++ KP V+ V +G A +NQ +A Sbjct: 184 DVIIVDSAGRHKEEKGLIEEMRQISEAIKPHEVILVIDGTIGQQA------YNQAMAFKE 237 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 P I I++TK D K G ALS V +G+P+ F+G G+ DL+ + K V Sbjct: 238 ATP----IGSIIVTKLDG-SAKGGGALSAVAATGAPIKFIGTGERIDDLEPFDPKRFVSR 292 Query: 229 LL 224 LL Sbjct: 293 LL 294
>SRP54_MYCLE (O33013) Signal recognition particle protein (Fifty-four homolog)| Length = 521 Score = 61.6 bits (148), Expect = 2e-09 Identities = 39/108 (36%), Positives = 56/108 (51%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DVV+VDTAGR+ ++ LM + PD VLFV A++G DAV F + Sbjct: 191 DVVIVDTAGRLGIDDELMAQAGAIREAINPDEVLFVLDAMIGQDAVTTAAAFGAGVG--- 247 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTD 266 G++LTK D D + GAALS+ ++G P++F G+ D Sbjct: 248 -------FTGVVLTKLDG-DARGGAALSVREVTGVPILFATTGEKLDD 287
>SRP54_ARCFU (O29633) Signal recognition 54 kDa protein (SRP54)| Length = 433 Score = 61.6 bits (148), Expect = 2e-09 Identities = 38/122 (31%), Positives = 61/122 (50%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 D++++DTAGR + L+ + K+ + +PD L V A +G A Q F++ + Sbjct: 175 DMIIIDTAGRHALEDELIDEMIKIAEVARPDYKLLVLDAAIGQLASKQAQAFHEAIG--- 231 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 I+GI++TKFD K G ALS G P+ F+G G+ D ++ + V Sbjct: 232 -------INGIIITKFDG-TAKGGGALSAARQIGIPIAFIGTGEKVEDFERFDPAGFVSR 283 Query: 229 LL 224 LL Sbjct: 284 LL 285
>SRP54_SCHPO (P21565) Signal recognition particle 54 kDa protein homolog (SRP54)| Length = 522 Score = 61.2 bits (147), Expect = 2e-09 Identities = 37/125 (29%), Positives = 66/125 (52%) Frame = -2 Query: 598 NKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLA 419 ++ DV++VDT+GR Q + L + ++ + +PD + + A +G A Q F ++ A Sbjct: 182 DRFDVIIVDTSGRHQQEQELFAEMVEISDAIRPDQTIMILDASIGQAAESQSKAF-KETA 240 Query: 418 DLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSI 239 D V ++TK D K G ALS V + +P++F+G G+ DL++ + +S Sbjct: 241 DFGAV---------IITKLDG-HAKGGGALSAVAATKTPIVFIGTGEHINDLERFSPRSF 290 Query: 238 VKTLL 224 + LL Sbjct: 291 ISKLL 295
>SRP54_HAEIN (P44518) Signal recognition particle protein (Fifty-four homolog)| Length = 462 Score = 61.2 bits (147), Expect = 2e-09 Identities = 38/122 (31%), Positives = 62/122 (50%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DV++VDTAGR+ + +M + ++ P LF A+ G DA + FN+ L Sbjct: 185 DVLIVDTAGRLHVDTEMMDEIKQVHAALNPIETLFTVDAMTGQDAANTAKAFNEALP--- 241 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + G++LTK D D + GAALS+ I+G P+ F+G G+ L+ + + Sbjct: 242 -------LTGVILTKVDG-DARGGAALSIRQITGKPIKFLGVGEKTEALEPFHPDRVASR 293 Query: 229 LL 224 +L Sbjct: 294 IL 295
>SRP54_PYRHO (O59307) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 60.5 bits (145), Expect = 4e-09 Identities = 39/122 (31%), Positives = 62/122 (50%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 D+++VDTAGR ++ + L+ + + +P V+ V +G A +NQ LA Sbjct: 184 DLIIVDTAGRHKEEKDLIEEMRMISEEIRPHEVILVIDGTIGQQA------YNQALAFKE 237 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 P I I++TK D+ K G ALS V +G+P+ F+G G+ DL+ + V Sbjct: 238 ATP----IGSIIVTKLDS-SAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPARFVSR 292 Query: 229 LL 224 LL Sbjct: 293 LL 294
>SRP54_MYCPN (P75054) Signal recognition particle protein (Fifty-four homolog)| Length = 450 Score = 59.7 bits (143), Expect = 6e-09 Identities = 35/120 (29%), Positives = 62/120 (51%) Frame = -2 Query: 583 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLSTV 404 ++ DTAGR+Q N+ LM L + N PD +L V L G + ++ +F+ +L Sbjct: 185 IICDTAGRLQTNQELMDELVAIKNELHPDEILMVVDGLSGQEIINVAKEFHNRLK----- 239 Query: 403 PTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 224 + G ++TK D+ D + GAALS+ + P+ +G + T L++ + + I +L Sbjct: 240 -----LTGFIITKLDS-DARAGAALSLTSLLEVPIKLMGTSEKLTGLEQFHPERIASRIL 293
>SRP54_ACIAM (P70722) Signal recognition 54 kDa protein (SRP54) (Fragment)| Length = 451 Score = 59.3 bits (142), Expect = 8e-09 Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 2/126 (1%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEP--LMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKL 422 K ++++VDTAGR E L+ + + KPD V V A +G A D +KFNQ Sbjct: 180 KMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFNQ-- 237 Query: 421 ADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKS 242 I I++TK D K G ALS V +G+ + F+G G+ +L+ N + Sbjct: 238 --------ASKIGTIIITKMDGTA-KGGGALSAVAATGATIKFIGTGEKIDELEVFNPRR 288 Query: 241 IVKTLL 224 V +L Sbjct: 289 FVARIL 294
>SRP54_METTH (O27376) Signal recognition 54 kDa protein (SRP54)| Length = 442 Score = 58.9 bits (141), Expect = 1e-08 Identities = 39/124 (31%), Positives = 63/124 (50%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLAD 416 K DV++ DTAGR ++ + L+R + +L + +P + V +G A +Q F +K D Sbjct: 179 KKDVIIFDTAGRHKEEKDLLREMEELSAIVEPHEAILVIDGTIGQQAREQALAF-RKATD 237 Query: 415 LSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 236 I I++TK D K G ALS V G+P+ F+G G+ DL+ + + + Sbjct: 238 ---------IGSIIVTKLDG-SAKGGGALSAVAEIGAPIKFIGTGERIDDLEVFDPERFI 287 Query: 235 KTLL 224 LL Sbjct: 288 SRLL 291
>SRP54_PYRAE (Q8ZT95) Signal recognition 54 kDa protein (SRP54)| Length = 433 Score = 58.9 bits (141), Expect = 1e-08 Identities = 40/144 (27%), Positives = 70/144 (48%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 DV++VDTAGR ++ E L++ + + + PD V+ V A VG A Q F + L Sbjct: 181 DVIIVDTAGRHRNEEALLKEVRAIYDAVSPDEVVLVIDATVGKMAAAQAEAFMKYLP--- 237 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 I +++TK D+ + G AL+ V +G+ V F+G G+ + ++ + + V Sbjct: 238 -------IHSVIITKMDS-TARGGGALAAVAKTGAKVKFIGVGEDVDEFEQFSPRKFVAR 289 Query: 229 LLK*NGSSTCRAPICAAYQRVSVI 158 +L T I A ++ V+ Sbjct: 290 VLGMGDLDTLLEKIKAVFEEEEVL 313
>SRP54_METMA (Q8PXF3) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 58.5 bits (140), Expect = 1e-08 Identities = 38/124 (30%), Positives = 59/124 (47%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLAD 416 K D+ +VDTAGR L+ + ++ + KPD V A +G A Q + FN + Sbjct: 177 KYDIKIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVG- 235 Query: 415 LSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 236 I G+++TK D K G ALS V + +P+ F+G G++ D +K + Sbjct: 236 ---------ITGVIITKLDG-TAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFI 285 Query: 235 KTLL 224 LL Sbjct: 286 SRLL 289
>SRP54_SULTO (Q971S9) Signal recognition 54 kDa protein (SRP54)| Length = 445 Score = 58.5 bits (140), Expect = 1e-08 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 2/126 (1%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEP--LMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKL 422 K D+++VDTAGR E L+ + + + KPD V+ V A +G A D ++F+Q Sbjct: 177 KYDIIIVDTAGRHGYGEEVKLLEEMKNMYSEIKPDEVILVIDASIGQKAYDLASRFHQAS 236 Query: 421 ADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKS 242 I I++TK D K G ALS V +G+ + F+G G+ +L+ N + Sbjct: 237 P----------IGSIIVTKMDGTA-KGGGALSAVAATGAAIKFIGTGEKLDELEVFNPRR 285 Query: 241 IVKTLL 224 V +L Sbjct: 286 FVSRIL 291
>SRP54_MYCGE (P47294) Signal recognition particle protein (Fifty-four homolog)| Length = 446 Score = 58.5 bits (140), Expect = 1e-08 Identities = 34/124 (27%), Positives = 62/124 (50%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLAD 416 K ++ DTAGR+Q NE LM L + N PD ++ V L G + ++ F+++L Sbjct: 181 KCQTIICDTAGRLQTNETLMDELVSVKNELNPDEIIMVVDGLSGQEIINVAQTFHKRLK- 239 Query: 415 LSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 236 + G +++K D+ D + GAALS+ + P+ +G + L++ + + I Sbjct: 240 ---------LTGFIISKLDS-DARAGAALSLASLLQVPIKLIGVSEKLDGLEQFHPERIA 289 Query: 235 KTLL 224 +L Sbjct: 290 NRIL 293
>SRP54_METAC (Q8THD0) Signal recognition 54 kDa protein (SRP54)| Length = 440 Score = 58.2 bits (139), Expect = 2e-08 Identities = 38/124 (30%), Positives = 59/124 (47%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLAD 416 K D+ +VDTAGR L+ + ++ + KPD V A +G A Q + FN + Sbjct: 177 KYDIRIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVG- 235 Query: 415 LSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 236 I G+++TK D K G ALS V + +P+ F+G G++ D +K + Sbjct: 236 ---------ITGVIITKLDG-TAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFI 285 Query: 235 KTLL 224 LL Sbjct: 286 SRLL 289
>SRP54_HALVO (Q977V2) Signal recognition 54 kDa protein (SRP54)| Length = 465 Score = 58.2 bits (139), Expect = 2e-08 Identities = 36/123 (29%), Positives = 64/123 (52%) Frame = -2 Query: 592 SDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADL 413 +DV +VDTAGR + L+ + ++ + +PDL L V A +G A +Q +F++ + Sbjct: 178 ADVHIVDTAGRHALEDDLIDEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESIG-- 235 Query: 412 STVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVK 233 I G+++TK D K G AL+ V + S + F+G G++ D+++ + Sbjct: 236 --------IGGVVITKLDG-TAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFIS 286 Query: 232 TLL 224 LL Sbjct: 287 RLL 289
>FTSY_RICPR (O05948) Cell division protein ftsY homolog| Length = 303 Score = 57.8 bits (138), Expect = 2e-08 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 6/128 (4%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVXXALVGNDAVDQLNKFNQ 428 D++ +DTAGR+ +N+ LM LSK++ + N P + + A+ G + +Q+ FN Sbjct: 185 DILFIDTAGRLHNNKNLMDELSKIVKVIKKLDENAPTHSILIIDAITGQNTYNQIEYFN- 243 Query: 427 KLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNV 248 D++ + G+++TK D K G + V PV F+G G+ DLK N Sbjct: 244 ---DVTN------LTGLIVTKLDG-SAKAGVLVGAVQKFNLPVYFIGIGEKIEDLKIFNR 293 Query: 247 KSIVKTLL 224 ++L+ Sbjct: 294 HDFSRSLV 301
>SRP54_GEOCY (Q8MZJ6) Signal recognition particle 54 kDa protein (SRP54)| Length = 499 Score = 57.8 bits (138), Expect = 2e-08 Identities = 34/122 (27%), Positives = 59/122 (48%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 +V++VDT+GR + E L + ++ PD ++FV +G Q F +K+ Sbjct: 184 EVIIVDTSGRHKQEESLFEEMLQVSQAIDPDNIIFVMDGTIGQACESQARAFKEKVD--- 240 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + +++TK D K G ALS V + SP++F+G G+ +++ K V Sbjct: 241 -------VASVIVTKLDG-HAKGGGALSAVAATRSPIIFIGTGEHIDEMEPFKTKPFVSK 292 Query: 229 LL 224 LL Sbjct: 293 LL 294
>SRP54_PONPY (Q5R4R6) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 56.6 bits (135), Expect = 5e-08 Identities = 32/122 (26%), Positives = 60/122 (49%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 ++++VDT+GR + + L + ++ N +PD +++V A +G Q F K+ Sbjct: 185 EIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVD--- 241 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + +++TK D K G ALS V + SP++F+G G+ D + + + Sbjct: 242 -------VASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISK 293 Query: 229 LL 224 LL Sbjct: 294 LL 295
>SRP54_MACFA (Q4R965) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 56.6 bits (135), Expect = 5e-08 Identities = 32/122 (26%), Positives = 60/122 (49%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 ++++VDT+GR + + L + ++ N +PD +++V A +G Q F K+ Sbjct: 185 EIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVD--- 241 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + +++TK D K G ALS V + SP++F+G G+ D + + + Sbjct: 242 -------VASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISK 293 Query: 229 LL 224 LL Sbjct: 294 LL 295
>SRP54_HUMAN (P61011) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 56.6 bits (135), Expect = 5e-08 Identities = 32/122 (26%), Positives = 60/122 (49%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 ++++VDT+GR + + L + ++ N +PD +++V A +G Q F K+ Sbjct: 185 EIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVD--- 241 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + +++TK D K G ALS V + SP++F+G G+ D + + + Sbjct: 242 -------VASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISK 293 Query: 229 LL 224 LL Sbjct: 294 LL 295
>SRP54_CANFA (P61010) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 56.6 bits (135), Expect = 5e-08 Identities = 32/122 (26%), Positives = 60/122 (49%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 ++++VDT+GR + + L + ++ N +PD +++V A +G Q F K+ Sbjct: 185 EIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVD--- 241 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + +++TK D K G ALS V + SP++F+G G+ D + + + Sbjct: 242 -------VASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISK 293 Query: 229 LL 224 LL Sbjct: 294 LL 295
>SRP54_HALSA (Q9HMN5) Signal recognition 54 kDa protein (SRP54)| Length = 460 Score = 56.6 bits (135), Expect = 5e-08 Identities = 36/123 (29%), Positives = 62/123 (50%) Frame = -2 Query: 592 SDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADL 413 +DV +VDTAGR + L+ + ++ + +PD L V A +G A Q +F+ + Sbjct: 178 ADVHIVDTAGRHALEDDLIAEIEEIEGVVEPDRSLLVLDAAIGQGAKQQARQFDASIG-- 235 Query: 412 STVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVK 233 IDG+ +TK D K G +L+ V + S + F+G G++ D+++ S + Sbjct: 236 --------IDGVAITKLDG-TAKGGGSLTAVNETDSTIAFLGSGETVQDIERFEPDSFIS 286 Query: 232 TLL 224 LL Sbjct: 287 RLL 289
>SRP54_RAT (Q6AYB5) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 56.2 bits (134), Expect = 7e-08 Identities = 32/122 (26%), Positives = 60/122 (49%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 ++++VDT+GR + + L + ++ N +PD +++V A +G Q F K+ Sbjct: 185 EIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKVD--- 241 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + +++TK D K G ALS V + SP++F+G G+ D + + + Sbjct: 242 -------VASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISK 293 Query: 229 LL 224 LL Sbjct: 294 LL 295
>SRP54_MOUSE (P14576) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 56.2 bits (134), Expect = 7e-08 Identities = 32/122 (26%), Positives = 60/122 (49%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 ++++VDT+GR + + L + ++ N +PD +++V A +G Q F K+ Sbjct: 185 EIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKVD--- 241 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 + +++TK D K G ALS V + SP++F+G G+ D + + + Sbjct: 242 -------VASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISK 293 Query: 229 LL 224 LL Sbjct: 294 LL 295
>FTSY_AQUAE (O67066) Cell division protein ftsY homolog| Length = 461 Score = 56.2 bits (134), Expect = 7e-08 Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 6/129 (4%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKL------INLNKPDLVLFVXXALVGNDAVDQLNKFNQ 428 +VVLVDTAGR+ EPL+ L K+ + +P L V A G +A+ Q F + Sbjct: 344 EVVLVDTAGRLHTKEPLINELRKIKKVIQKFDKEEPSETLLVIDATTGQNAIQQAKVFKE 403 Query: 427 KLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNV 248 + I GI++TK D K GA +++ P+ VG G+ DL+ + Sbjct: 404 AVD----------ITGIVVTKLDG-SAKGGAVVAICRELKIPIKLVGVGEGIDDLQPFDA 452 Query: 247 KSIVKTLLK 221 + V+ LL+ Sbjct: 453 DAYVEALLE 461
>FTSY_HAEIN (P44870) Cell division protein ftsY homolog| Length = 414 Score = 55.8 bits (133), Expect = 9e-08 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 6/127 (4%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNK------PDLVLFVXXALVGNDAVDQLNKFNQ 428 D+++ DTAGR+Q+ LM L K++ + K P ++ A G +A+ Q FN+ Sbjct: 293 DILIADTAGRLQNKNNLMDELKKIVRVMKKYDETAPHEIMLTLDAGTGQNAISQAKLFNE 352 Query: 427 KLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNV 248 + + GI LTK D K G ++ P+ ++G G+ DL++ N Sbjct: 353 AVG----------LTGISLTKLDG-TAKGGVIFAIADQFKLPIRYIGVGEKIEDLREFNA 401 Query: 247 KSIVKTL 227 K ++ L Sbjct: 402 KEFIEAL 408
>FTSY_ECOLI (P10121) Cell division protein ftsY| Length = 497 Score = 55.5 bits (132), Expect = 1e-07 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 6/127 (4%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNK------PDLVLFVXXALVGNDAVDQLNKFNQ 428 DV++ DTAGR+Q+ LM L K++ + K P V+ A G +AV Q F++ Sbjct: 377 DVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHE 436 Query: 427 KLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNV 248 + + GI LTK D K G S+ G P+ ++G G+ DL+ Sbjct: 437 AVG----------LTGITLTKLDG-TAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKA 485 Query: 247 KSIVKTL 227 ++ L Sbjct: 486 DDFIEAL 492
>SRP54_SULAC (O07853) Signal recognition 54 kDa protein (SRP54)| Length = 444 Score = 53.9 bits (128), Expect = 3e-07 Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 2/126 (1%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEP--LMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKL 422 K ++V++DTAGR E L+ + + + PD V+ V A +G A D ++F+Q Sbjct: 177 KMNIVIIDTAGRHGYGEEASLLEEMKSMYDKIHPDEVILVIDASIGQKAYDLASRFHQAS 236 Query: 421 ADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKS 242 I ++++K D K G ALS V +G+ + F+G G+ +L+ N + Sbjct: 237 P----------IGSLIVSKMDGTA-KGGGALSAVIATGAQIKFIGTGEKLDELEVFNPRR 285 Query: 241 IVKTLL 224 V LL Sbjct: 286 FVSRLL 291
>SRP54_YARLI (Q99150) Signal recognition particle 54 kDa protein homolog (SRP54)| Length = 536 Score = 53.1 bits (126), Expect = 6e-07 Identities = 37/124 (29%), Positives = 58/124 (46%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLAD 416 K ++++VDT+GR + L + + KPD + V A +G A Q F D Sbjct: 185 KFEIIIVDTSGRHRQESELFTEMVDIGAAVKPDSTIMVLDASIGQAAEPQSRAFK----D 240 Query: 415 LSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 236 S I+LTK D K G A+S V + +P++F+G G+ DL+ + K + Sbjct: 241 ASD------FGSIILTKMDG-HAKGGGAISAVAATNTPIIFIGTGEHIHDLEAFSPKQFI 293 Query: 235 KTLL 224 LL Sbjct: 294 SKLL 297
>FTSY_BUCAP (Q8KA77) Cell division protein ftsY homolog| Length = 351 Score = 52.8 bits (125), Expect = 8e-07 Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 6/129 (4%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEPLMRALSKLI------NLNKPDLVLFVXXALVGNDAVDQLNKF 434 K DV+++DTAGR+ + L+ L K++ NL+ P ++ + A G + + Q F Sbjct: 231 KIDVLIIDTAGRLHNKLHLLEELKKMVRVIKKLNLSAPHEIMLIIDACNGQNTIKQTEMF 290 Query: 433 NQKLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKL 254 ++ + + G+++TK D K G S+ P+ ++G G+ TDL Sbjct: 291 HKAIN----------LTGLVITKLDG-TAKGGVIFSLANQFLIPIRYIGIGEKTTDLVVF 339 Query: 253 NVKSIVKTL 227 N +K++ Sbjct: 340 NSNDFIKSI 348
>FTSY_MYCPN (P75362) Cell division protein ftsY homolog| Length = 348 Score = 52.8 bits (125), Expect = 8e-07 Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 6/132 (4%) Frame = -2 Query: 598 NKSDVVLVDTAGRMQDNEPLMRALSKL------INLNKPDLVLFVXXALVGNDAVDQLNK 437 N+ D VL DT+GR+Q+ LM L K+ ++ KP L V G + Q Sbjct: 217 NEYDFVLCDTSGRLQNKTNLMNELKKIYQIVQKVSSAKPQETLLVLDGTTGQSGLAQAKV 276 Query: 436 FNQKLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKK 257 FN+ + GI+LTK D+ K G L++ + PV +G G++ DL Sbjct: 277 FNE----------FTELTGIILTKMDS-SSKGGIILAIKDLFNLPVKLIGFGETTADLAA 325 Query: 256 LNVKSIVKTLLK 221 +++ V L K Sbjct: 326 FDLEQYVLGLTK 337
>FTSY_THEAQ (P83749) Cell division protein ftsY| Length = 303 Score = 52.4 bits (124), Expect = 1e-06 Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 6/129 (4%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKL------INLNKPDLVLFVXXALVGNDAVDQLNKFNQ 428 D++ VDTAGR+ LM L K+ + +P V V A+ G + ++Q KF++ Sbjct: 185 DLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHE 244 Query: 427 KLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNV 248 + + G+++TK D K G + +V P+ FVG G+ DL+ + Sbjct: 245 AVG----------LTGVIVTKLDG-TAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDP 293 Query: 247 KSIVKTLLK 221 ++ V+ LL+ Sbjct: 294 EAFVEALLE 302
>FTSY_NEIMC (O30391) Cell division protein ftsY homolog| Length = 421 Score = 50.8 bits (120), Expect = 3e-06 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 6/128 (4%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVXXALVGNDAVDQLNKFNQ 428 D+VL DTAGR+ LM + K+ + + P ++ V A +G +AV+Q+ F+ Sbjct: 304 DIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDD 363 Query: 427 KLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNV 248 L + G+++TK D K G ++ PV ++G G+ DL+ + Sbjct: 364 ALG----------LTGLIVTKLDG-TAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDA 412 Query: 247 KSIVKTLL 224 ++ V LL Sbjct: 413 RAFVDALL 420
>FTSY_NEIMB (P57011) Cell division protein ftsY homolog| Length = 421 Score = 50.8 bits (120), Expect = 3e-06 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 6/128 (4%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVXXALVGNDAVDQLNKFNQ 428 D+VL DTAGR+ LM + K+ + + P ++ V A +G +AV+Q+ F+ Sbjct: 304 DIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDD 363 Query: 427 KLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNV 248 L + G+++TK D K G ++ PV ++G G+ DL+ + Sbjct: 364 ALG----------LTGLIVTKLDG-TAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDA 412 Query: 247 KSIVKTLL 224 ++ V LL Sbjct: 413 RAFVDALL 420
>FTSY_NEIMA (P57010) Cell division protein ftsY homolog| Length = 421 Score = 50.8 bits (120), Expect = 3e-06 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 6/128 (4%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVXXALVGNDAVDQLNKFNQ 428 D+VL DTAGR+ LM + K+ + + P ++ V A +G +AV+Q+ F+ Sbjct: 304 DIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDD 363 Query: 427 KLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNV 248 L + G+++TK D K G ++ PV ++G G+ DL+ + Sbjct: 364 ALG----------LTGLIVTKLDG-TAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDA 412 Query: 247 KSIVKTLL 224 ++ V LL Sbjct: 413 RAFVDALL 420
>FTSY_SYNY3 (P73930) Cell division protein ftsY homolog| Length = 504 Score = 50.8 bits (120), Expect = 3e-06 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 6/128 (4%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSK---LINLNKPDLV---LFVXXALVGNDAVDQLNKFNQ 428 +++LVDTAGR+Q+ + LM L+K +I+ P+ L V A +G + + Q F + Sbjct: 386 NLLLVDTAGRLQNKKNLMDELAKIRRIIDKKAPNATVESLLVLDATLGQNGLRQAEVFAE 445 Query: 427 KLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNV 248 + G++LTK D K G AL++ P+ F+G G+ DL+ + Sbjct: 446 ----------AAKLSGVVLTKLDG-SAKGGVALAVAQQLNLPIRFIGAGEGIEDLRPFSS 494 Query: 247 KSIVKTLL 224 V+ LL Sbjct: 495 YEFVEALL 502
>SRP54_THEVO (Q979Y8) Signal recognition 54 kDa protein (SRP54)| Length = 455 Score = 50.8 bits (120), Expect = 3e-06 Identities = 35/123 (28%), Positives = 57/123 (46%) Frame = -2 Query: 592 SDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADL 413 + V ++DT+GR + L+ + ++ KPD VL V A +G A + N + Sbjct: 178 AQVKIIDTSGRDSLDSDLIEEIRRIKEAVKPDQVLMVIDATMGQQAGPESKAINDAVG-- 235 Query: 412 STVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVK 233 + GI++TK D K G ALS V P+ F+G G+ D++ + K + Sbjct: 236 --------VTGIIITKMDG-TAKGGGALSAVAKMRVPIYFIGTGEHMDDMEIFDPKKFLS 286 Query: 232 TLL 224 LL Sbjct: 287 RLL 289
>SRP54_ASPNG (Q00179) Signal recognition particle 54 kDa protein homolog| Length = 534 Score = 50.1 bits (118), Expect = 5e-06 Identities = 32/122 (26%), Positives = 62/122 (50%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS 410 ++++VDT+GR + E L ++++ PD + V + +G A Q + F + AD Sbjct: 186 EIIIVDTSGRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSSAF-KATADFG 244 Query: 409 TVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 230 I++TK D G A+S V + +P++++G G+ DL++ K+ ++ Sbjct: 245 ---------AIIITKTDG-HAAGGGAISAVAATHTPIIYLGTGEHLMDLERFEPKAFIQK 294 Query: 229 LL 224 LL Sbjct: 295 LL 296
>SRP54_THEAC (Q9HKT0) Signal recognition 54 kDa protein (SRP54)| Length = 456 Score = 50.1 bits (118), Expect = 5e-06 Identities = 35/121 (28%), Positives = 55/121 (45%) Frame = -2 Query: 586 VVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLST 407 V ++DT+GR + L + ++ PD VL + A +G A + FN + Sbjct: 180 VKIIDTSGRDSMDAELFDEIRRIKEAVAPDEVLMIIDATMGQQAGPEAKAFNDAIG---- 235 Query: 406 VPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTL 227 + GI++TK D K G ALS V P+ F+G G+ DL+ + K + L Sbjct: 236 ------VTGIIITKMDG-TAKGGGALSAVAEIHVPIYFIGTGEHMDDLEVFDPKKFLSRL 288 Query: 226 L 224 L Sbjct: 289 L 289
>FTSY_NEIGO (P14929) Cell division protein ftsY homolog| Length = 416 Score = 50.1 bits (118), Expect = 5e-06 Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 6/128 (4%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVXXALVGNDAVDQLNKFNQ 428 D+VL DTAGR+ LM + K+ + P ++ V A +G +AV+Q+ F+ Sbjct: 299 DIVLADTAGRLPTQLHLMEEIKKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDD 358 Query: 427 KLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNV 248 L + G+++TK D K G ++ PV ++G G+ DL+ + Sbjct: 359 ALG----------LTGLIVTKLDG-TAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDA 407 Query: 247 KSIVKTLL 224 ++ V LL Sbjct: 408 RAFVDRLL 415
>FTSY_HELPJ (Q9ZL80) Cell division protein ftsY homolog| Length = 293 Score = 50.1 bits (118), Expect = 5e-06 Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 6/128 (4%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVXXALVGNDAVDQLNKFNQ 428 D V +DTAGR+ + L LSK+ + + P + G+ + Q F++ Sbjct: 170 DEVFIDTAGRLHNQTNLKNELSKIAHTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHE 229 Query: 427 KLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNV 248 LA +DG+++TK D K GA LS++Y P++++G G+ DL + Sbjct: 230 TLA----------LDGVIMTKLDG-TSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDE 278 Query: 247 KSIVKTLL 224 + ++ L+ Sbjct: 279 ERFIEDLV 286
>FTSY_HELPY (O25458) Cell division protein ftsY homolog| Length = 293 Score = 49.7 bits (117), Expect = 6e-06 Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 6/128 (4%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKL------INLNKPDLVLFVXXALVGNDAVDQLNKFNQ 428 D V +DTAGR+ + L LSK+ + + P + G+ + Q F++ Sbjct: 170 DEVFIDTAGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHE 229 Query: 427 KLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNV 248 LA +DG+++TK D K GA LS++Y P++++G G+ DL + Sbjct: 230 TLA----------LDGVIMTKLDG-TSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDE 278 Query: 247 KSIVKTLL 224 + ++ L+ Sbjct: 279 ERFIEDLV 286
>SRP54_CANAL (O42816) Signal recognition particle 54 kDa protein homolog| Length = 556 Score = 49.7 bits (117), Expect = 6e-06 Identities = 33/124 (26%), Positives = 56/124 (45%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLAD 416 K D+++VDT+GR + E L + ++ +P + V +G A Q F + Sbjct: 200 KFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQPTQTIMVMDGSIGQAAESQARAFKE---- 255 Query: 415 LSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 236 I+LTK D K G A+S V + +P++F+G G+ DL+ + + Sbjct: 256 ------SSNFGSIILTKMDG-HAKGGGAISAVAATKTPIVFIGTGEHVGDLEIFKPTTFI 308 Query: 235 KTLL 224 LL Sbjct: 309 SKLL 312
>FTSY_MYCHO (O32861) Cell division protein ftsY homolog| Length = 351 Score = 49.7 bits (117), Expect = 6e-06 Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 6/131 (4%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVXXALVGNDAVDQLNKF 434 K D+++VDTAGR+Q+ LM L+K+ + + P L V A G + V Q F Sbjct: 228 KYDILIVDTAGRLQNKVNLMNELAKINRVLASKIPDAPHESLLVLDATTGQNGVIQARVF 287 Query: 433 NQKLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKL 254 + + GI+LTK D K G L++ G V ++G G+ DL + Sbjct: 288 KESTP----------LTGIILTKMDG-TSKGGIVLTIKDEIGLFVKYIGLGEKVDDLAEF 336 Query: 253 NVKSIVKTLLK 221 ++ S + L K Sbjct: 337 DLDSYIYGLTK 347
>FTSY_MYCGE (P47539) Cell division protein ftsY homolog| Length = 346 Score = 49.7 bits (117), Expect = 6e-06 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 6/131 (4%) Frame = -2 Query: 598 NKSDVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVXXALVGNDAVDQLNK 437 +K D VL DT+GR+Q+ LM L K+ + ++P L V VG + Q Sbjct: 217 DKYDFVLCDTSGRLQNKLNLMNELQKIYQIIQKVSGSEPSETLLVLDGTVGQTGLSQAKV 276 Query: 436 FNQKLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKK 257 FN+ + GI+LTK D K G L++ + PV +G G+ +DL Sbjct: 277 FNE----------FSKLTGIVLTKMDG-SAKGGIILAIKDMFNLPVKLIGFGEKTSDLAI 325 Query: 256 LNVKSIVKTLL 224 +++ V LL Sbjct: 326 FDLEKYVLGLL 336
>FTSY_BUCBP (Q89B28) Cell division protein ftsY homolog| Length = 397 Score = 48.1 bits (113), Expect = 2e-05 Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 6/131 (4%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKL------INLNKPDLVLFVXXALVGNDAVDQLNKFNQ 428 D++++DTAGR+ + LM L K+ I+ + V A +G +++ Q+ F++ Sbjct: 275 DILIIDTAGRLHNKNNLMEELKKIKRVIHKIDSTISQETMLVLDACIGQNSIKQVKIFHE 334 Query: 427 KLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNV 248 L + G+++TK D+ K G S+ PV ++ G+ + D++ N Sbjct: 335 SLN----------VTGLVITKLDS-TAKGGVIFSIAQEFLIPVRYISFGEDFEDIQVFNS 383 Query: 247 KSIVKTLLK*N 215 V +L N Sbjct: 384 NIFVNAILSNN 394
>FTSY_BUCAI (P57137) Cell division protein ftsY homolog| Length = 378 Score = 47.4 bits (111), Expect = 3e-05 Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 6/129 (4%) Frame = -2 Query: 595 KSDVVLVDTAGRMQDNEPLMRALSKL------INLNKPDLVLFVXXALVGNDAVDQLNKF 434 K DV+++DTAGR+ + L+ L K+ I+++ P L + + G + + Q F Sbjct: 259 KIDVLIIDTAGRLHNKLHLIEELKKIVRVIKKIDISAPHEKLLIIDSCNGQNTIQQTEIF 318 Query: 433 NQKLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKL 254 ++ L + GI++TK D K G S+ P+ ++G G+ DL Sbjct: 319 HKALN----------LTGIIITKLDG-TAKGGVVFSLADQFQIPIRYIGIGEKMQDLGHF 367 Query: 253 NVKSIVKTL 227 N + ++++ Sbjct: 368 NSQEFIESI 376
>FTSY_BACSU (P51835) Cell division protein ftsY homolog| Length = 329 Score = 47.0 bits (110), Expect = 4e-05 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 6/125 (4%) Frame = -2 Query: 592 SDVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVXXALVGNDAVDQLNKFN 431 +DV++ DTAGR+Q+ LM+ L K+ + P VL A G +A+ Q +F+ Sbjct: 203 ADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPHEVLLALDATTGQNAMAQAKEFS 262 Query: 430 QKLADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLN 251 + + GI LTK D K G L++ PV VG G+ DL++ + Sbjct: 263 K----------ATNVTGIALTKLDG-TAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFD 311 Query: 250 VKSIV 236 +S V Sbjct: 312 PESYV 316
>SRP54_AERPE (Q9YB62) Signal recognition 54 kDa protein (SRP54)| Length = 441 Score = 45.4 bits (106), Expect = 1e-04 Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 2/125 (1%) Frame = -2 Query: 592 SDVVLVDTAGRMQDNEP--LMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLA 419 +++V+VDTAGR E L+ + + + +PD V V A +G A+ +F++ Sbjct: 178 AEIVIVDTAGRHGHGEEARLLDEMKAIASKVRPDEVALVIDASIGQKAMGLAERFHKSTP 237 Query: 418 DLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSI 239 I I++TK D + G AL+ ++G+ + F+G G++ +L+ + Sbjct: 238 ----------IGSIIVTKMDG-TARGGGALTAAAVTGARIKFIGTGETLGELEPFAPRRF 286 Query: 238 VKTLL 224 V +L Sbjct: 287 VARIL 291
>FTSY_MYCTU (P66842) Cell division protein ftsY homolog| Length = 422 Score = 45.4 bits (106), Expect = 1e-04 Identities = 41/127 (32%), Positives = 56/127 (44%), Gaps = 4/127 (3%) Frame = -2 Query: 592 SDVVLVDTAGRMQDNEPLMRALSKLINL----NKPDLVLFVXXALVGNDAVDQLNKFNQK 425 +DVVL+DTAGR+ LM L K+ + D VL V A +G + + Q F + Sbjct: 306 ADVVLIDTAGRLHTKVGLMDELDKVKRVVTRRASVDEVLLVLDATIGQNGLAQARVF-AE 364 Query: 424 LADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVK 245 + D+S G +LTK D K G + G PV VG G+ DL Sbjct: 365 VVDIS---------GAVLTKLDG-TAKGGIVFRVQQELGVPVKLVGLGEGPDDLAPFEPA 414 Query: 244 SIVKTLL 224 + V LL Sbjct: 415 AFVDALL 421
>FTSY_MYCBO (P66843) Cell division protein ftsY homolog| Length = 422 Score = 45.4 bits (106), Expect = 1e-04 Identities = 41/127 (32%), Positives = 56/127 (44%), Gaps = 4/127 (3%) Frame = -2 Query: 592 SDVVLVDTAGRMQDNEPLMRALSKLINL----NKPDLVLFVXXALVGNDAVDQLNKFNQK 425 +DVVL+DTAGR+ LM L K+ + D VL V A +G + + Q F + Sbjct: 306 ADVVLIDTAGRLHTKVGLMDELDKVKRVVTRRASVDEVLLVLDATIGQNGLAQARVF-AE 364 Query: 424 LADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVK 245 + D+S G +LTK D K G + G PV VG G+ DL Sbjct: 365 VVDIS---------GAVLTKLDG-TAKGGIVFRVQQELGVPVKLVGLGEGPDDLAPFEPA 414 Query: 244 SIVKTLL 224 + V LL Sbjct: 415 AFVDALL 421
>FTSY_MYCLE (O33010) Cell division protein ftsY homolog| Length = 430 Score = 43.5 bits (101), Expect = 5e-04 Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 4/128 (3%) Frame = -2 Query: 592 SDVVLVDTAGRMQDNEPLMRALSKLINL----NKPDLVLFVXXALVGNDAVDQLNKFNQK 425 +DVV++DTAGR+ LM L K+ + D VL V A +G + + Q+ F + Sbjct: 314 ADVVVIDTAGRLHTKVGLMDELDKIKRVVTRRAAVDEVLLVLDATIGQNGLTQVRVFAEV 373 Query: 424 LADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVK 245 + I G +LTK D K G + G PV VG G+ DL Sbjct: 374 VD----------ITGAVLTKLDG-TAKGGIVFRIQRELGVPVKLVGLGEGPDDLAPFEPA 422 Query: 244 SIVKTLLK 221 V LL+ Sbjct: 423 VFVDALLE 430
>FLHF_AQUAE (O67266) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 373 Score = 32.0 bits (71), Expect = 1.4 Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 6/129 (4%) Frame = -2 Query: 589 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXA-----LVGNDAVDQLNKFNQK 425 DV+LVDTAGR + ++ L ++ D+ +++ A LV +A+ Q F+ Sbjct: 250 DVILVDTAGRSHYDVIRLKELETYFKVS--DISVYLTLAANLSELVMYEAIMQFGMFS-- 305 Query: 424 LADLSTVPTXRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSY-TDLKKLNV 248 I G++ TK D G+ +++ Y + PV+ GQS D+ N Sbjct: 306 ------------ISGLIFTKLDE-TPYPGSMVNVAYRTQYPVVCFTMGQSIPEDIVVANY 352 Query: 247 KSIVKTLLK 221 +V+ +L+ Sbjct: 353 DYLVRLILE 361
>PANC_PSEAE (Q9HV69) Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate| synthetase) (Pantoate-activating enzyme) Length = 283 Score = 31.6 bits (70), Expect = 1.8 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 7/91 (7%) Frame = -2 Query: 568 AGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLST------ 407 A R E + +SKL+N+ +PDL LF G QL + + DL+ Sbjct: 121 ASRPGHFEGVATVVSKLLNMVQPDLALF------GEKDFQQLAVIRKLVRDLNLPVQIFG 174 Query: 406 VPTXRLIDGILL-TKFDTIDDKVGAALSMVY 317 PT R DG+ L ++ +D++ AA +Y Sbjct: 175 EPTVRAADGLALSSRNGYLDEQQRAAAPAIY 205
>RMS1_YEAST (Q12504) Putative transcription regulator RMS1| Length = 494 Score = 31.2 bits (69), Expect = 2.4 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +2 Query: 338 SNLVIDSVKLGEQDTIDQSXCWNSGKICQFLIELVELIN--CVIPNQC 475 +N I GE+ +D C+N+G++ LI LV+++ C IP C Sbjct: 320 NNANIQEFLEGEEIVLDSYDCYNNGELLPQLILLVQILTILCQIPGLC 367
>VE5_HPV39 (P24833) Probable protein E5| Length = 72 Score = 30.0 bits (66), Expect = 5.3 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Frame = -2 Query: 136 IVVFLVWFGV------ELSSLANFHCCCQLIAAVWIVVLRFL 29 ++VFLVWFGV + L + H C A VWI+V F+ Sbjct: 3 LLVFLVWFGVCIYICCNVPLLPSVHVC----AYVWIIVFVFI 40
>ADA1D_PIG (Q9TTM9) Alpha-1D adrenergic receptor (Alpha 1D-adrenoceptor)| (Alpha 1D-adrenoreceptor) Length = 571 Score = 29.3 bits (64), Expect = 9.1 Identities = 13/43 (30%), Positives = 19/43 (44%) Frame = -2 Query: 214 GSSTCRAPICAAYQRVSVISPNIPRDIVVFLVWFGVELSSLAN 86 GS+ C CA V +S N+P D W EL+ ++ Sbjct: 523 GSAPCAEAPCALRSEVEAVSLNVPHDAAEGATWQAYELADYSH 565
>UVRC_BORBU (O51413) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 603 Score = 29.3 bits (64), Expect = 9.1 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = +2 Query: 362 KLGEQDT-IDQSXCWNSGKICQFLIELVELINCVIPNQCLXHK*DQIWLVEID 517 KL E+D D+S C + I QFLI+ IN ++P++ I+L +ID Sbjct: 271 KLVERDANFDESICKENELILQFLIQYYTSINMIVPDKI------HIFLKDID 317
>PANC_PHOLL (Q7N870) Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate| synthetase) (Pantoate-activating enzyme) Length = 284 Score = 29.3 bits (64), Expect = 9.1 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%) Frame = -2 Query: 580 LVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVXXALVGNDAVDQLNKFNQKLADLS--- 410 +++ A R + +SKL NL +PDL F G QL + +ADL+ Sbjct: 117 MLEGASRPGHFRGVSTVVSKLFNLVQPDLTYF------GEKDFQQLQLIRKMIADLAYDI 170 Query: 409 ---TVPTXRLIDGILLT 368 +VPT R +G+ L+ Sbjct: 171 TLVSVPTVRDQNGLALS 187 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,630,356 Number of Sequences: 219361 Number of extensions: 1754006 Number of successful extensions: 4652 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 4474 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4581 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
