ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7e22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103682.1| Zea mays PCO122909 mRNA sequence 345 1e-91
2ref|XM_482982.1| Oryza sativa (japonica cultivar-group), mRNA 317 2e-83
3ref|XM_482983.1| Oryza sativa (japonica cultivar-group), mRNA 317 2e-83
4dbj|AK101591.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
5dbj|AK065513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
6gb|AY372539.1| Cucumis sativus signal recognition particle recep... 131 3e-27
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
8dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
9dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
10ref|NM_119206.3| Arabidopsis thaliana GTP binding / GTPase/ RNA ... 111 3e-21
11gb|AY133612.1| Arabidopsis thaliana AT4g30600/F17I23_60 mRNA, co... 111 3e-21
12gb|AY065066.1| Arabidopsis thaliana AT4g30600/F17I23_60 mRNA, co... 111 3e-21
13emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, ... 98 4e-17
14gb|AF160182.1|F17I23 Arabidopsis thaliana BAC F17I23 98 4e-17
15gb|AC136953.17| Medicago truncatula clone mth2-20h6, complete se... 94 6e-16
16emb|AJ293426.1|BOL293426 Brassica oleracea partial mRNA for hypo... 86 2e-13
17ref|XM_684658.1| PREDICTED: Danio rerio similar to signal recogn... 60 9e-06
18ref|XM_692426.1| PREDICTED: Danio rerio similar to signal recogn... 60 9e-06
19ref|XM_947200.1| Theileria annulata strain Ankara signal recogni... 58 3e-05
20gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome 56 1e-04
21ref|XM_792097.1| PREDICTED: Strongylocentrotus purpuratus simila... 56 1e-04
22emb|AJ851760.1| Gallus gallus mRNA for hypothetical protein, clo... 52 0.002
23ref|NM_001039277.1| Gallus gallus signal recognition particle re... 52 0.002
24gb|AY786549.1| Caenorhabditis remanei signal recognition particl... 46 0.13
25gb|AC011708.8|ATAC011708 Arabidopsis thaliana chromosome III BAC... 42 2.1
26gb|AC153386.3| Mus musculus 6 BAC RP23-198D7 (Roswell Park Cance... 40 8.2
27ref|XM_867780.1| PREDICTED: Bos taurus hypothetical protein LOC6... 40 8.2
28gb|AY639147.1| Stizostedion vitreum vitreum genomic sequence 40 8.2
29gb|DQ192032.1|DQ192032S1 Stizostedion vitreum vitreum putative c... 40 8.2
30gb|AC006700.1| Caenorhabditis elegans cosmid Y104H12C, complete ... 40 8.2
31emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 8.2
32gb|AC148756.2| Medicago truncatula clone mth2-22d18, complete se... 40 8.2
33gb|AC182764.2| Gallus gallus BAC clone CH261-140B3 from chromoso... 40 8.2
34gb|AF047663.3| Caenorhabditis elegans cosmid W09G12, complete se... 40 8.2
35ref|NM_067658.2| Caenorhabditis elegans W09G12.5 (W09G12.5) mRNA... 40 8.2
36emb|BX545854.10| Zebrafish DNA sequence from clone CH211-195N8 i... 40 8.2
37dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 8.2
38emb|AL670882.5| Mouse DNA sequence from clone RP23-286G19 on chr... 40 8.2 
>gb|AY103682.1| Zea mays PCO122909 mRNA sequence
          Length = 1641

 Score =  345 bits (174), Expect = 1e-91
 Identities = 327/379 (86%)
 Strand = Plus / Minus

                                                                        
Query: 220  acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 279
            ||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 1382 acttcaggagggtcttcacaatggatttcacgttcagcttcttcaggtccgtgtaggact 1323

                                                                        
Query: 280  gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 339
            |||| || || ||||||||||| |||| |||||||||||| |||||||| || || ||||
Sbjct: 1322 gaccacagccaacgaacatgactggagctccagatatgtagaccatggaaagcgctgctc 1263

                                                                        
Query: 340  caaccttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctanctg 399
            |||||||||| ||||| |||||||||||||||||||||||||||||||||| |||| | |
Sbjct: 1262 caaccttgtcgtcgatggtgtcaaacttggtgagcaggataccatcgatcaatctagcag 1203

                                                                        
Query: 400  ttggaacagtggaaagatctgccaatttctgattgaacttgttgagctgatcaactgcgt 459
            | |||||||  || || ||||| | |||||| || || ||  |||||||||| || || |
Sbjct: 1202 tgggaacagcagataggtctgctagtttctggttaaatttagtgagctgatccacagcat 1143

                                                                        
Query: 460  cattcccaaccaatgcctntnccacaaataagaccagatctggcttgttgagattgatga 519
            |||| ||||||||||| | | | |||||||| ||||| |||||  | ||||||||||| |
Sbjct: 1142 catttccaaccaatgcttctccaacaaataaaaccaggtctgggctattgagattgatta 1083

                                                                        
Query: 520  gcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgtatcaacaa 579
            ||||||||||||| ||||| |||||||| || ||||||||||| ||||| || ||||| |
Sbjct: 1082 gcttggagagtgccctcatgagtggctcgttgtcctgcatacgtccagcagtgtcaacca 1023

                               
Query: 580  gaacaacatctgatttgtt 598
            |||||||||||||||||||
Sbjct: 1022 gaacaacatctgatttgtt 1004
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>ref|XM_482982.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2130

 Score =  317 bits (160), Expect = 2e-83
 Identities = 319/373 (85%)
 Strand = Plus / Minus

                                                                        
Query: 220  acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 279
            ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 1916 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 1857

                                                                        
Query: 280  gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 339
            |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| ||||
Sbjct: 1856 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 1797

                                                                        
Query: 340  caaccttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctanctg 399
            |||||||||| ||||| ||||||||||||||||||||||| ||||| |||| |||    |
Sbjct: 1796 caaccttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtag 1737

                                                                        
Query: 400  ttggaacagtggaaagatctgccaatttctgattgaacttgttgagctgatcaactgcgt 459
            | || |||| |||||| ||||| |||||||| || || ||  |||| |||||||| || |
Sbjct: 1736 tagggacagcggaaaggtctgctaatttctggttaaatttagtgagttgatcaacagcat 1677

                                                                        
Query: 460  cattcccaaccaatgcctntnccacaaataagaccagatctggcttgttgagattgatga 519
            |||| ||||||||||| |   | |||||||| || ||||||||  | |||||||||||||
Sbjct: 1676 cattaccaaccaatgcttccccaacaaataaaactagatctgggctattgagattgatga 1617

                                                                        
Query: 520  gcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgtatcaacaa 579
            ||||||||||||||||||| ||||||||||||||||||||||| ||||| || || ||||
Sbjct: 1616 gcttggagagtgctctcatgagtggctcattatcctgcatacgtccagcagtgtcgacaa 1557

                         
Query: 580  gaacaacatctga 592
            |||||||||||||
Sbjct: 1556 gaacaacatctga 1544
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>ref|XM_482983.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2332

 Score =  317 bits (160), Expect = 2e-83
 Identities = 319/373 (85%)
 Strand = Plus / Minus

                                                                        
Query: 220  acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 279
            ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 2026 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 1967

                                                                        
Query: 280  gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 339
            |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| ||||
Sbjct: 1966 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 1907

                                                                        
Query: 340  caaccttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctanctg 399
            |||||||||| ||||| ||||||||||||||||||||||| ||||| |||| |||    |
Sbjct: 1906 caaccttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtag 1847

                                                                        
Query: 400  ttggaacagtggaaagatctgccaatttctgattgaacttgttgagctgatcaactgcgt 459
            | || |||| |||||| ||||| |||||||| || || ||  |||| |||||||| || |
Sbjct: 1846 tagggacagcggaaaggtctgctaatttctggttaaatttagtgagttgatcaacagcat 1787

                                                                        
Query: 460  cattcccaaccaatgcctntnccacaaataagaccagatctggcttgttgagattgatga 519
            |||| ||||||||||| |   | |||||||| || ||||||||  | |||||||||||||
Sbjct: 1786 cattaccaaccaatgcttccccaacaaataaaactagatctgggctattgagattgatga 1727

                                                                        
Query: 520  gcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgtatcaacaa 579
            ||||||||||||||||||| ||||||||||||||||||||||| ||||| || || ||||
Sbjct: 1726 gcttggagagtgctctcatgagtggctcattatcctgcatacgtccagcagtgtcgacaa 1667

                         
Query: 580  gaacaacatctga 592
            |||||||||||||
Sbjct: 1666 gaacaacatctga 1654
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>dbj|AK101591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051D02, full
            insert sequence
          Length = 2331

 Score =  317 bits (160), Expect = 2e-83
 Identities = 319/373 (85%)
 Strand = Plus / Minus

                                                                        
Query: 220  acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 279
            ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 2025 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 1966

                                                                        
Query: 280  gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 339
            |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| ||||
Sbjct: 1965 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 1906

                                                                        
Query: 340  caaccttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctanctg 399
            |||||||||| ||||| ||||||||||||||||||||||| ||||| |||| |||    |
Sbjct: 1905 caaccttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtag 1846

                                                                        
Query: 400  ttggaacagtggaaagatctgccaatttctgattgaacttgttgagctgatcaactgcgt 459
            | || |||| |||||| ||||| |||||||| || || ||  |||| |||||||| || |
Sbjct: 1845 tagggacagcggaaaggtctgctaatttctggttaaatttagtgagttgatcaacagcat 1786

                                                                        
Query: 460  cattcccaaccaatgcctntnccacaaataagaccagatctggcttgttgagattgatga 519
            |||| ||||||||||| |   | |||||||| || ||||||||  | |||||||||||||
Sbjct: 1785 cattaccaaccaatgcttccccaacaaataaaactagatctgggctattgagattgatga 1726

                                                                        
Query: 520  gcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgtatcaacaa 579
            ||||||||||||||||||| ||||||||||||||||||||||| ||||| || || ||||
Sbjct: 1725 gcttggagagtgctctcatgagtggctcattatcctgcatacgtccagcagtgtcgacaa 1666

                         
Query: 580  gaacaacatctga 592
            |||||||||||||
Sbjct: 1665 gaacaacatctga 1653
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>dbj|AK065513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033N04, full
            insert sequence
          Length = 2130

 Score =  317 bits (160), Expect = 2e-83
 Identities = 319/373 (85%)
 Strand = Plus / Minus

                                                                        
Query: 220  acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 279
            ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 1916 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 1857

                                                                        
Query: 280  gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 339
            |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| ||||
Sbjct: 1856 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 1797

                                                                        
Query: 340  caaccttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctanctg 399
            |||||||||| ||||| ||||||||||||||||||||||| ||||| |||| |||    |
Sbjct: 1796 caaccttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtag 1737

                                                                        
Query: 400  ttggaacagtggaaagatctgccaatttctgattgaacttgttgagctgatcaactgcgt 459
            | || |||| |||||| ||||| |||||||| || || ||  |||| |||||||| || |
Sbjct: 1736 tagggacagcggaaaggtctgctaatttctggttaaatttagtgagttgatcaacagcat 1677

                                                                        
Query: 460  cattcccaaccaatgcctntnccacaaataagaccagatctggcttgttgagattgatga 519
            |||| ||||||||||| |   | |||||||| || ||||||||  | |||||||||||||
Sbjct: 1676 cattaccaaccaatgcttccccaacaaataaaactagatctgggctattgagattgatga 1617

                                                                        
Query: 520  gcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgtatcaacaa 579
            ||||||||||||||||||| ||||||||||||||||||||||| ||||| || || ||||
Sbjct: 1616 gcttggagagtgctctcatgagtggctcattatcctgcatacgtccagcagtgtcgacaa 1557

                         
Query: 580  gaacaacatctga 592
            |||||||||||||
Sbjct: 1556 gaacaacatctga 1544
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>gb|AY372539.1| Cucumis sativus signal recognition particle receptor protein mRNA,
           partial cds
          Length = 1128

 Score =  131 bits (66), Expect = 3e-27
 Identities = 135/158 (85%)
 Strand = Plus / Minus

                                                                       
Query: 237 acgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccgacgaac 296
           ||||| ||||| ||||| |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 923 acgattgatttgacattgagcttcttgaggtcggtatatgactgtccacagccgacgaac 864

                                                                       
Query: 297 atgaccggagatccagatatgtaaaccatggacagtgcggctccaaccttgtcatcgata 356
           || ||||| | |||||||||||| ||||| |||| ||| |||||||||||||| ||||| 
Sbjct: 863 attaccggtgctccagatatgtagaccatagacaatgctgctccaaccttgtcgtcgatg 804

                                                 
Query: 357 gtgtcaaacttggtgagcaggataccatcgatcagtct 394
           ||||| ||||| ||||||| ||||||||| ||||||||
Sbjct: 803 gtgtcgaactttgtgagcaagataccatcaatcagtct 766



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                       
Query: 513 ttgatgagcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgta 572
           ||||| ||||| ||||| |||||||| ||||| |||||||||||||| |  ||||| |||
Sbjct: 647 ttgataagctttgagagagctctcatgagtggttcattatcctgcattctcccagctgta 588

                                
Query: 573 tcaacaagaacaacatctgat 593
           ||||||||||| |||||||||
Sbjct: 587 tcaacaagaactacatctgat 567
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  123 bits (62), Expect = 7e-25
 Identities = 110/126 (87%)
 Strand = Plus / Plus

                                                                            
Query: 220      acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 279
                ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 23710827 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 23710886

                                                                            
Query: 280      gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 339
                |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| ||||
Sbjct: 23710887 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 23710946

                      
Query: 340      caacct 345
                ||||||
Sbjct: 23710947 caacct 23710952



 Score =  113 bits (57), Expect = 7e-22
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                            
Query: 442      tgagctgatcaactgcgtcattcccaaccaatgcctntnccacaaataagaccagatctg 501
                |||| |||||||| || ||||| ||||||||||| |   | |||||||| || |||||||
Sbjct: 23711381 tgagttgatcaacagcatcattaccaaccaatgcttccccaacaaataaaactagatctg 23711440

                                                                       
Query: 502      gcttgttgagattgatgagcttggagagtgctctcatcagtggctcattatcctg 556
                |  | |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 23711441 ggctattgagattgatgagcttggagagtgctctcatgagtggctcattatcctg 23711495



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                            
Query: 342      accttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctanctgtt 401
                |||||||| ||||| ||||||||||||||||||||||| ||||| |||| |||    || 
Sbjct: 23711035 accttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtagta 23711094

                                             
Query: 402      ggaacagtggaaagatctgccaatttctg 430
                || |||| |||||| ||||| ||||||||
Sbjct: 23711095 gggacagcggaaaggtctgctaatttctg 23711123



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 553      cctgcatacgaccagccgtatcaacaagaacaacatctga 592
                |||||||||| ||||| || || |||||||||||||||||
Sbjct: 23711592 cctgcatacgtccagcagtgtcgacaagaacaacatctga 23711631
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>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
           BAC clone:OSJNBb0092C08
          Length = 131049

 Score =  123 bits (62), Expect = 7e-25
 Identities = 110/126 (87%)
 Strand = Plus / Plus

                                                                       
Query: 220 acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 279
           ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 27  acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 86

                                                                       
Query: 280 gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 339
           |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| ||||
Sbjct: 87  gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 146

                 
Query: 340 caacct 345
           ||||||
Sbjct: 147 caacct 152



 Score =  113 bits (57), Expect = 7e-22
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                       
Query: 442 tgagctgatcaactgcgtcattcccaaccaatgcctntnccacaaataagaccagatctg 501
           |||| |||||||| || ||||| ||||||||||| |   | |||||||| || |||||||
Sbjct: 581 tgagttgatcaacagcatcattaccaaccaatgcttccccaacaaataaaactagatctg 640

                                                                  
Query: 502 gcttgttgagattgatgagcttggagagtgctctcatcagtggctcattatcctg 556
           |  | |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 641 ggctattgagattgatgagcttggagagtgctctcatgagtggctcattatcctg 695



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 342 accttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctanctgtt 401
           |||||||| ||||| ||||||||||||||||||||||| ||||| |||| |||    || 
Sbjct: 235 accttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtagta 294

                                        
Query: 402 ggaacagtggaaagatctgccaatttctg 430
           || |||| |||||| ||||| ||||||||
Sbjct: 295 gggacagcggaaaggtctgctaatttctg 323



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 553 cctgcatacgaccagccgtatcaacaagaacaacatctga 592
           |||||||||| ||||| || || |||||||||||||||||
Sbjct: 792 cctgcatacgtccagcagtgtcgacaagaacaacatctga 831
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>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1113_A10
          Length = 160089

 Score =  123 bits (62), Expect = 7e-25
 Identities = 110/126 (87%)
 Strand = Plus / Plus

                                                                          
Query: 220    acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 279
              ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 118423 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 118482

                                                                          
Query: 280    gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 339
              |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| ||||
Sbjct: 118483 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 118542

                    
Query: 340    caacct 345
              ||||||
Sbjct: 118543 caacct 118548



 Score =  113 bits (57), Expect = 7e-22
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                          
Query: 442    tgagctgatcaactgcgtcattcccaaccaatgcctntnccacaaataagaccagatctg 501
              |||| |||||||| || ||||| ||||||||||| |   | |||||||| || |||||||
Sbjct: 118977 tgagttgatcaacagcatcattaccaaccaatgcttccccaacaaataaaactagatctg 119036

                                                                     
Query: 502    gcttgttgagattgatgagcttggagagtgctctcatcagtggctcattatcctg 556
              |  | |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 119037 ggctattgagattgatgagcttggagagtgctctcatgagtggctcattatcctg 119091



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                          
Query: 342    accttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctanctgtt 401
              |||||||| ||||| ||||||||||||||||||||||| ||||| |||| |||    || 
Sbjct: 118631 accttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtagta 118690

                                           
Query: 402    ggaacagtggaaagatctgccaatttctg 430
              || |||| |||||| ||||| ||||||||
Sbjct: 118691 gggacagcggaaaggtctgctaatttctg 118719



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 553    cctgcatacgaccagccgtatcaacaagaacaacatctga 592
              |||||||||| ||||| || || |||||||||||||||||
Sbjct: 119188 cctgcatacgtccagcagtgtcgacaagaacaacatctga 119227
to top
>ref|NM_119206.3| Arabidopsis thaliana GTP binding / GTPase/ RNA binding /
            nucleoside-triphosphatase/ nucleotide binding / signal
            recognition particle binding AT4G30600 mRNA, complete cds
          Length = 2248

 Score =  111 bits (56), Expect = 3e-21
 Identities = 137/164 (83%)
 Strand = Plus / Minus

                                                                        
Query: 231  gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 290
            ||||| || |||| ||| ||||| |||||||||||||||||||| ||||| || || || 
Sbjct: 1994 gtcttgactatggctttgacattaagcttcttcaggtcagtgtaagactggccacaaccc 1935

                                                                        
Query: 291  acgaacatgaccggagatccagatatgtaaaccatggacagtgcggctccaaccttgtca 350
            |||||||| ||||| ||||| |||||||||||||| ||||  || ||||| |||||||| 
Sbjct: 1934 acgaacataaccggtgatcccgatatgtaaaccatagacaacgctgctccgaccttgtcg 1875

                                                        
Query: 351  tcgatagtgtcaaacttggtgagcaggataccatcgatcagtct 394
            || || || |||||||| || || | ||| ||||||||||||||
Sbjct: 1874 tcaatggtatcaaactttgtaagtaagattccatcgatcagtct 1831



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                        
Query: 513  ttgatgagcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgta 572
            ||||||||||| ||||||||||||||||  || |||||||||||||| |||||||| || 
Sbjct: 1712 ttgatgagctttgagagtgctctcatcaaaggttcattatcctgcatccgaccagctgtg 1653

                             
Query: 573  tcaacaagaacaacatc 589
            |||||||||||||||||
Sbjct: 1652 tcaacaagaacaacatc 1636
to top
>gb|AY133612.1| Arabidopsis thaliana AT4g30600/F17I23_60 mRNA, complete cds
          Length = 1905

 Score =  111 bits (56), Expect = 3e-21
 Identities = 137/164 (83%)
 Strand = Plus / Minus

                                                                        
Query: 231  gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 290
            ||||| || |||| ||| ||||| |||||||||||||||||||| ||||| || || || 
Sbjct: 1892 gtcttgactatggctttgacattaagcttcttcaggtcagtgtaagactggccacaaccc 1833

                                                                        
Query: 291  acgaacatgaccggagatccagatatgtaaaccatggacagtgcggctccaaccttgtca 350
            |||||||| ||||| ||||| |||||||||||||| ||||  || ||||| |||||||| 
Sbjct: 1832 acgaacataaccggtgatcccgatatgtaaaccatagacaacgctgctccgaccttgtcg 1773

                                                        
Query: 351  tcgatagtgtcaaacttggtgagcaggataccatcgatcagtct 394
            || || || |||||||| || || | ||| ||||||||||||||
Sbjct: 1772 tcaatggtatcaaactttgtaagtaagattccatcgatcagtct 1729



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                        
Query: 513  ttgatgagcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgta 572
            ||||||||||| ||||||||||||||||  || |||||||||||||| |||||||| || 
Sbjct: 1610 ttgatgagctttgagagtgctctcatcaaaggttcattatcctgcatccgaccagctgtg 1551

                             
Query: 573  tcaacaagaacaacatc 589
            |||||||||||||||||
Sbjct: 1550 tcaacaagaacaacatc 1534
to top
>gb|AY065066.1| Arabidopsis thaliana AT4g30600/F17I23_60 mRNA, complete cds
          Length = 2265

 Score =  111 bits (56), Expect = 3e-21
 Identities = 137/164 (83%)
 Strand = Plus / Minus

                                                                        
Query: 231  gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 290
            ||||| || |||| ||| ||||| |||||||||||||||||||| ||||| || || || 
Sbjct: 2026 gtcttgactatggctttgacattaagcttcttcaggtcagtgtaagactggccacaaccc 1967

                                                                        
Query: 291  acgaacatgaccggagatccagatatgtaaaccatggacagtgcggctccaaccttgtca 350
            |||||||| ||||| ||||| |||||||||||||| ||||  || ||||| |||||||| 
Sbjct: 1966 acgaacataaccggtgatcccgatatgtaaaccatagacaacgctgctccgaccttgtcg 1907

                                                        
Query: 351  tcgatagtgtcaaacttggtgagcaggataccatcgatcagtct 394
            || || || |||||||| || || | ||| ||||||||||||||
Sbjct: 1906 tcaatggtatcaaactttgtaagtaagattccatcgatcagtct 1863



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                        
Query: 513  ttgatgagcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgta 572
            ||||||||||| ||||||||||||||||  || |||||||||||||| |||||||| || 
Sbjct: 1744 ttgatgagctttgagagtgctctcatcaaaggttcattatcctgcatccgaccagctgtg 1685

                             
Query: 573  tcaacaagaacaacatc 589
            |||||||||||||||||
Sbjct: 1684 tcaacaagaacaacatc 1668
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>emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 73
          Length = 194862

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                         
Query: 513   ttgatgagcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgta 572
             ||||||||||| ||||||||||||||||  || |||||||||||||| |||||||| || 
Sbjct: 84327 ttgatgagctttgagagtgctctcatcaaaggttcattatcctgcatccgaccagctgtg 84386

                              
Query: 573   tcaacaagaacaacatc 589
             |||||||||||||||||
Sbjct: 84387 tcaacaagaacaacatc 84403



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                         
Query: 231   gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 290
             ||||| || |||| ||| ||||| |||||||||||||||||||| ||||| || || || 
Sbjct: 83882 gtcttgactatggctttgacattaagcttcttcaggtcagtgtaagactggccacaaccc 83941

                                                     
Query: 291   acgaacatgaccggagatccagatatgtaaaccatggaca 330
             |||||||| ||||| ||||| |||||||||||||| ||||
Sbjct: 83942 acgaacataaccggtgatcccgatatgtaaaccatagaca 83981
to top
>gb|AF160182.1|F17I23 Arabidopsis thaliana BAC F17I23
          Length = 134784

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                         
Query: 513   ttgatgagcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgta 572
             ||||||||||| ||||||||||||||||  || |||||||||||||| |||||||| || 
Sbjct: 16990 ttgatgagctttgagagtgctctcatcaaaggttcattatcctgcatccgaccagctgtg 16931

                              
Query: 573   tcaacaagaacaacatc 589
             |||||||||||||||||
Sbjct: 16930 tcaacaagaacaacatc 16914



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                         
Query: 231   gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 290
             ||||| || |||| ||| ||||| |||||||||||||||||||| ||||| || || || 
Sbjct: 17435 gtcttgactatggctttgacattaagcttcttcaggtcagtgtaagactggccacaaccc 17376

                                                     
Query: 291   acgaacatgaccggagatccagatatgtaaaccatggaca 330
             |||||||| ||||| ||||| |||||||||||||| ||||
Sbjct: 17375 acgaacataaccggtgatcccgatatgtaaaccatagaca 17336
to top
>gb|AC136953.17| Medicago truncatula clone mth2-20h6, complete sequence
          Length = 94019

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                         
Query: 231   gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 290
             |||||||| ||||| || || || || ||||| |||||||| |||||||| |||||||| 
Sbjct: 21137 gtcttcacaatggacttgacgttgagtttcttgaggtcagtataggactgtccgcatccc 21078

                                                                    
Query: 291   acgaacatgaccggagatccagatatgtaaaccatggacagtgcggctccaacct 345
             || |||||||| |||| |||||||||||||||||| || ||||| ||||| ||||
Sbjct: 21077 acaaacatgactggagctccagatatgtaaaccattgaaagtgcagctcccacct 21023



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                         
Query: 444   agctgatcaactgcgtcattcccaaccaatgcctntnccacaaataagaccagatctggc 503
             |||||||||||||| ||||| ||||||| ||| | | | ||||||||||| || || || 
Sbjct: 20567 agctgatcaactgcatcattgccaaccagtgcttctccaacaaataagacaaggtcagga 20508

                                                                  
Query: 504   ttgttgagattgatgagcttggagagtgctctcatcagtggctcattatcctg 556
             ||||| || | ||| ||||| || ||||||||||||| ||| |||||||||||
Sbjct: 20507 ttgttaaggtagatcagctttgacagtgctctcatcaatggttcattatcctg 20455



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 342   accttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatca 390
             ||||| ||||| |||||||||||||| ||||||| ||| ||||| ||||
Sbjct: 20772 accttatcatcaatagtgtcaaactttgtgagcaagatcccatcaatca 20724



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 553   cctgcatacgaccagccgtatcaacaagaacaacatc 589
             |||||||||||||||| ||||| || || ||||||||
Sbjct: 19777 cctgcatacgaccagctgtatcgactagcacaacatc 19741
to top
>emb|AJ293426.1|BOL293426 Brassica oleracea partial mRNA for hypothetical protein, clone
           LSC815, differential screening experiment
          Length = 300

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 100/119 (84%)
 Strand = Plus / Minus

                                                                       
Query: 249 acattcagcttcttcaggtcagtgtaggactgaccgcatccgacgaacatgaccggagat 308
           ||||| |||||||||||||||||||| ||||| || || || |||||||| ||||| | |
Sbjct: 183 acattgagcttcttcaggtcagtgtaagactggccacaacccacgaacataaccggtgct 124

                                                                      
Query: 309 ccagatatgtaaaccatggacagtgcggctccaaccttgtcatcgatagtgtcaaactt 367
           || |||||||||||||| || | ||| ||||||||||| || || || || ||||||||
Sbjct: 123 cccgatatgtaaaccatcgataatgctgctccaaccttatcgtcaatggtatcaaactt 65
to top
>ref|XM_684658.1| PREDICTED: Danio rerio similar to signal recognition particle
           receptor (docking protein) (LOC561252), partial mRNA
          Length = 1125

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 336 gctccaaccttgtcatcgatagtgtcaaacttggtgag 373
           ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 107 gctcccaccttgtcatcaatagtgtcaaacttggtgag 70
to top
>ref|XM_692426.1| PREDICTED: Danio rerio similar to signal recognition particle
           receptor (docking protein) (LOC569063), mRNA
          Length = 1587

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 336 gctccaaccttgtcatcgatagtgtcaaacttggtgag 373
           ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 569 gctcccaccttgtcatcaatagtgtcaaacttggtgag 532
to top
>ref|XM_947200.1| Theileria annulata strain Ankara signal recognition particle receptor
            subunit alpha (TA13100) partial mRNA
          Length = 1644

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 536  catcagtggctcattatcctgcatacgaccagccgtatcaa 576
            ||||| |||||||||||||||||||||||| || |||||||
Sbjct: 1338 catcaatggctcattatcctgcatacgacccgctgtatcaa 1298



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 321  accatggacagtgcggctccaaccttgtcatc 352
            |||||||| |||||||||||||||||||||||
Sbjct: 1541 accatggatagtgcggctccaaccttgtcatc 1510
to top
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                   
Query: 555     tgcatacgaccagccgtatcaacaagaacaacatct 590
               |||| |||||||||||||||||||| ||||||||||
Sbjct: 1128558 tgcaaacgaccagccgtatcaacaataacaacatct 1128593
to top
>ref|XM_792097.1| PREDICTED: Strongylocentrotus purpuratus similar to signal
            recognition particle receptor (docking protein)
            (LOC592583), partial mRNA
          Length = 1674

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 521  cttggagagtgctctcatcagtggctcattatcctgcatacgaccagc 568
            |||||||||||| ||||| |||||||| || |||||||| ||||||||
Sbjct: 1497 cttggagagtgccctcatgagtggctcgttgtcctgcattcgaccagc 1450



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 344  cttgtcatcgatagtgtcaaacttggtgag 373
            ||||||||| || |||||||||||||||||
Sbjct: 1674 cttgtcatcaatggtgtcaaacttggtgag 1645
to top
>emb|AJ851760.1| Gallus gallus mRNA for hypothetical protein, clone 28a6
          Length = 3102

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 342  accttgtcatcgatagtgtcaaacttggtgagca 375
            |||||||||||||| || ||||||||||||||||
Sbjct: 1845 accttgtcatcgatggtatcaaacttggtgagca 1812
to top
>ref|NM_001039277.1| Gallus gallus signal recognition particle receptor ('docking
            protein') (SRPR), mRNA
          Length = 3102

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 342  accttgtcatcgatagtgtcaaacttggtgagca 375
            |||||||||||||| || ||||||||||||||||
Sbjct: 1845 accttgtcatcgatggtatcaaacttggtgagca 1812
to top
>gb|AY786549.1| Caenorhabditis remanei signal recognition particle receptor alpha
           subunit mRNA, partial cds
          Length = 549

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 532 ctctcatcagtggctcattatcctgcatacgaccagccgtatc 574
           |||||||||  || ||||||||||||||||| ||||| |||||
Sbjct: 352 ctctcatcaacggttcattatcctgcatacgtccagcagtatc 310
to top
>gb|AC011708.8|ATAC011708 Arabidopsis thaliana chromosome III BAC T7M13 genomic sequence,
             complete sequence
          Length = 80379

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 60    gcaataagttgacagcaacaa 80
             |||||||||||||||||||||
Sbjct: 20010 gcaataagttgacagcaacaa 20030
to top
>gb|AC153386.3| Mus musculus 6 BAC RP23-198D7 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 170561

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 1     atattattgtntttattaattaatttc 27
             |||||||| | ||||||||||||||||
Sbjct: 41936 atattattatatttattaattaatttc 41962
to top
>ref|XM_867780.1| PREDICTED: Bos taurus hypothetical protein LOC615860 (LOC615860),
           mRNA
          Length = 987

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 538 tcagtggctcattatcctgc 557
           ||||||||||||||||||||
Sbjct: 778 tcagtggctcattatcctgc 759
to top
>gb|AY639147.1| Stizostedion vitreum vitreum genomic sequence
          Length = 10284

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 398  tgttggaacagtggaaagat 417
            ||||||||||||||||||||
Sbjct: 3330 tgttggaacagtggaaagat 3311
to top
>gb|DQ192032.1|DQ192032S1 Stizostedion vitreum vitreum putative calpain-like protein gene,
            exons 1 through 14
          Length = 10677

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 398  tgttggaacagtggaaagat 417
            ||||||||||||||||||||
Sbjct: 3330 tgttggaacagtggaaagat 3311
to top
>gb|AC006700.1| Caenorhabditis elegans cosmid Y104H12C, complete sequence
          Length = 1366

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 532  ctctcatcagtggctcattatcctgcat 559
            |||||||||| || ||||||||||||||
Sbjct: 1207 ctctcatcagcggttcattatcctgcat 1234
to top
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 424     atttctgattgaacttgttg 443
               ||||||||||||||||||||
Sbjct: 4287774 atttctgattgaacttgttg 4287793
to top
>gb|AC148756.2| Medicago truncatula clone mth2-22d18, complete sequence
          Length = 107160

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   aaaccaaacgagaaaaacaa 132
             ||||||||||||||||||||
Sbjct: 41908 aaaccaaacgagaaaaacaa 41889
to top
>gb|AC182764.2| Gallus gallus BAC clone CH261-140B3 from chromosome 1, complete sequence
          Length = 192460

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 5      tattgtntttattaattaatttc 27
              |||||| ||||||||||||||||
Sbjct: 162352 tattgtatttattaattaatttc 162374
to top
>gb|AF047663.3| Caenorhabditis elegans cosmid W09G12, complete sequence
          Length = 32179

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 532   ctctcatcagtggctcattatcctgcat 559
             |||||||||| || ||||||||||||||
Sbjct: 32086 ctctcatcagcggttcattatcctgcat 32113
to top
>ref|NM_067658.2| Caenorhabditis elegans W09G12.5 (W09G12.5) mRNA, complete cds
          Length = 976

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 532 ctctcatcagtggctcattatcctgcat 559
           |||||||||| || ||||||||||||||
Sbjct: 28  ctctcatcagcggttcattatcctgcat 1
to top
>emb|BX545854.10| Zebrafish DNA sequence from clone CH211-195N8 in linkage group 11,
              complete sequence
          Length = 190179

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 405    acagtggaaagatctgccaa 424
              ||||||||||||||||||||
Sbjct: 108689 acagtggaaagatctgccaa 108670
to top
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 424     atttctgattgaacttgttg 443
               ||||||||||||||||||||
Sbjct: 4402158 atttctgattgaacttgttg 4402177
to top
>emb|AL670882.5| Mouse DNA sequence from clone RP23-286G19 on chromosome X, complete
              sequence
          Length = 194517

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 3      attattgtntttattaattaatt 25
              |||||||| ||||||||||||||
Sbjct: 125498 attattgtttttattaattaatt 125520


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,063,052
Number of Sequences: 3902068
Number of extensions: 5063052
Number of successful extensions: 98176
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98007
Number of HSP's gapped (non-prelim): 165
length of query: 599
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 576
effective length of database: 17,143,297,704
effective search space: 9874539477504
effective search space used: 9874539477504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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