ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6p15 |
|---|---|
| Clone Library Name | barley_pub |
>PCY2_MOUSE (Q922E4) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)| (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 404 Score = 83.2 bits (204), Expect = 6e-16 Identities = 43/99 (43%), Positives = 59/99 (59%) Frame = -1 Query: 620 PIMNLHERSLSVLACRYVDEVIIGAPWDISKDMITTFNISLVVQGTIAENMDFAKDESHP 441 PIMNLHER+LSVLACRYV EV+IGAP+ ++ +++ F + LV G D +D S P Sbjct: 282 PIMNLHERTLSVLACRYVSEVVIGAPYSVTAELLNHFKVDLVCHGKTEIVPD--RDGSDP 339 Query: 440 YAVPMDMGIFHRLESPLDXXXXXXXXXIVSNHEAYQKRN 324 Y P GIF++++S D I+ N Y+ RN Sbjct: 340 YQEPKRRGIFYQIDSGSDLTTDLIVQRIIKNRLEYEARN 378
>PCY2_RAT (O88637) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)| (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 404 Score = 81.3 bits (199), Expect = 2e-15 Identities = 43/99 (43%), Positives = 58/99 (58%) Frame = -1 Query: 620 PIMNLHERSLSVLACRYVDEVIIGAPWDISKDMITTFNISLVVQGTIAENMDFAKDESHP 441 PIMNLHER+LSVLACRYV EV+IGAP+ ++ +++ F + LV G D +D S P Sbjct: 282 PIMNLHERTLSVLACRYVSEVVIGAPYSVTAELLNHFKVDLVCHGKTEIVPD--RDGSDP 339 Query: 440 YAVPMDMGIFHRLESPLDXXXXXXXXXIVSNHEAYQKRN 324 Y P GIF +++S D I+ N Y+ RN Sbjct: 340 YEEPKRRGIFCQIDSGSDLTTDLIVQRIIKNRLEYEARN 378
>PCY2_HUMAN (Q99447) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)| (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 389 Score = 80.5 bits (197), Expect = 4e-15 Identities = 42/99 (42%), Positives = 60/99 (60%) Frame = -1 Query: 620 PIMNLHERSLSVLACRYVDEVIIGAPWDISKDMITTFNISLVVQGTIAENMDFAKDESHP 441 PIMNLHER+LSVLACRYV EV+IGAP+ ++ ++++ F + LV G D +D S P Sbjct: 264 PIMNLHERTLSVLACRYVSEVVIGAPYAVTAELLSHFKVDLVCHGKTEIIPD--RDGSDP 321 Query: 440 YAVPMDMGIFHRLESPLDXXXXXXXXXIVSNHEAYQKRN 324 Y P GIF +++S + I++N Y+ RN Sbjct: 322 YQEPKRRGIFRQIDSGSNLTTDLIVQRIITNRLEYEARN 360 Score = 30.4 bits (67), Expect = 4.9 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = -1 Query: 620 PIMNLHERSLSVLACRYVDEVIIGAPWDISKDMITTFNISLVVQG 486 P+ ER V A ++VDEV+ AP+ + + + +N V G Sbjct: 69 PVFTQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKYNCDFCVHG 113
>PCY1A_MOUSE (P49586) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 44.3 bits (103), Expect = 3e-04 Identities = 28/98 (28%), Positives = 44/98 (44%) Frame = -1 Query: 617 IMNLHERSLSVLACRYVDEVIIGAPWDISKDMITTFNISLVVQGTIAENMDFAKDESHPY 438 +MN +ER +V CRYVDEV+ APW ++ + + I V I + + D Y Sbjct: 126 VMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDD---VY 182 Query: 437 AVPMDMGIFHRLESPLDXXXXXXXXXIVSNHEAYQKRN 324 D G+F + IV +++ Y +RN Sbjct: 183 KHIKDAGMFAPTQRTEGISTSDIITRIVRDYDVYARRN 220
>PCY1A_RAT (P19836) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 42.7 bits (99), Expect = 0.001 Identities = 27/98 (27%), Positives = 44/98 (44%) Frame = -1 Query: 617 IMNLHERSLSVLACRYVDEVIIGAPWDISKDMITTFNISLVVQGTIAENMDFAKDESHPY 438 +MN +ER +V CRYVDEV+ APW ++ + + I V I + + D Y Sbjct: 126 VMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDD---VY 182 Query: 437 AVPMDMGIFHRLESPLDXXXXXXXXXIVSNHEAYQKRN 324 + G+F + IV +++ Y +RN Sbjct: 183 KHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRN 220
>PCY1A_HUMAN (P49585) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 42.7 bits (99), Expect = 0.001 Identities = 27/98 (27%), Positives = 44/98 (44%) Frame = -1 Query: 617 IMNLHERSLSVLACRYVDEVIIGAPWDISKDMITTFNISLVVQGTIAENMDFAKDESHPY 438 +MN +ER +V CRYVDEV+ APW ++ + + I V I + + D Y Sbjct: 126 VMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDD---VY 182 Query: 437 AVPMDMGIFHRLESPLDXXXXXXXXXIVSNHEAYQKRN 324 + G+F + IV +++ Y +RN Sbjct: 183 KHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRN 220
>PCY1A_CRIGR (P49584) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 42.7 bits (99), Expect = 0.001 Identities = 27/98 (27%), Positives = 44/98 (44%) Frame = -1 Query: 617 IMNLHERSLSVLACRYVDEVIIGAPWDISKDMITTFNISLVVQGTIAENMDFAKDESHPY 438 +MN +ER +V CRYVDEV+ APW ++ + + I V I + + D Y Sbjct: 126 VMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDD---VY 182 Query: 437 AVPMDMGIFHRLESPLDXXXXXXXXXIVSNHEAYQKRN 324 + G+F + IV +++ Y +RN Sbjct: 183 KHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRN 220
>PCY1B_RAT (Q9QZC4) Choline-phosphate cytidylyltransferase B (EC 2.7.7.15)| (Phosphorylcholine transferase B) (CTP:phosphocholine cytidylyltransferase B) (CT B) (CCT B) (CCT-beta) Length = 369 Score = 40.0 bits (92), Expect = 0.006 Identities = 27/98 (27%), Positives = 43/98 (43%) Frame = -1 Query: 617 IMNLHERSLSVLACRYVDEVIIGAPWDISKDMITTFNISLVVQGTIAENMDFAKDESHPY 438 +MN ER ++ CRYVDEVI APW ++ + + I V I + + D Y Sbjct: 126 VMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSSAGSDD---VY 182 Query: 437 AVPMDMGIFHRLESPLDXXXXXXXXXIVSNHEAYQKRN 324 + G+F + IV +++ Y +RN Sbjct: 183 KHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRN 220
>PCY1B_HUMAN (Q9Y5K3) Choline-phosphate cytidylyltransferase B (EC 2.7.7.15)| (Phosphorylcholine transferase B) (CTP:phosphocholine cytidylyltransferase B) (CT B) (CCT B) (CCT-beta) Length = 369 Score = 40.0 bits (92), Expect = 0.006 Identities = 27/98 (27%), Positives = 43/98 (43%) Frame = -1 Query: 617 IMNLHERSLSVLACRYVDEVIIGAPWDISKDMITTFNISLVVQGTIAENMDFAKDESHPY 438 +MN ER ++ CRYVDEVI APW ++ + + I V I + + D Y Sbjct: 126 VMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSSAGSDD---VY 182 Query: 437 AVPMDMGIFHRLESPLDXXXXXXXXXIVSNHEAYQKRN 324 + G+F + IV +++ Y +RN Sbjct: 183 KHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRN 220
>ECT1_SCHPO (Q9UTI6) Probable ethanolamine-phosphate cytidylyltransferase (EC| 2.7.7.14) (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 365 Score = 38.5 bits (88), Expect = 0.018 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = -1 Query: 620 PIMNLHERSLSVLACRYVDEVIIGAPWDISKDMITTFNISLVVQG 486 P+M L ER LS C++VDEV+ AP+ + + + VV G Sbjct: 55 PVMTLEERCLSANTCKWVDEVVPSAPYVFDLEWMRRYGCQYVVHG 99 Score = 33.5 bits (75), Expect = 0.57 Identities = 11/26 (42%), Positives = 20/26 (76%) Frame = -1 Query: 620 PIMNLHERSLSVLACRYVDEVIIGAP 543 P++NL ER L++L C+Y+ +++G P Sbjct: 248 PMLNLLERILNLLQCKYISSILVGPP 273
>TAGD_BACSU (P27623) Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)| (GCT) (Gro-PCT) (CDP-glycerol pyrophosphorylase) (Teichoic acid biosynthesis protein D) Length = 129 Score = 36.2 bits (82), Expect = 0.088 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = -1 Query: 599 RSLSVLACRYVDEVIIGAPWDISKDMITTFNISLVVQGTIAE-NMDFAKDESHPYAVPMD 423 R L + RYVDEVI W+ K I NI + V G E DF KD+ +P Sbjct: 55 RKLILETIRYVDEVIPEKNWEQKKQDIIDHNIDVFVMGDDWEGKFDFLKDQCEVVYLPRT 114 Query: 422 MGI 414 GI Sbjct: 115 EGI 117
>ECT1_YEAST (P33412) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)| (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 323 Score = 36.2 bits (82), Expect = 0.088 Identities = 17/29 (58%), Positives = 21/29 (72%) Frame = -1 Query: 632 DHIGPIMNLHERSLSVLACRYVDEVIIGA 546 D+ IM + ER LSVL+C+YVD VII A Sbjct: 238 DYSSTIMTMKERVLSVLSCKYVDAVIIDA 266
>PCY1_YEAST (P13259) Choline-phosphate cytidylyltransferase (EC 2.7.7.15)| (Phosphorylcholine transferase) (CTP:phosphocholine cytidylyltransferase) (CT) (CCT) Length = 424 Score = 33.5 bits (75), Expect = 0.57 Identities = 22/93 (23%), Positives = 38/93 (40%) Frame = -1 Query: 602 ERSLSVLACRYVDEVIIGAPWDISKDMITTFNISLVVQGTIAENMDFAKDESHPYAVPMD 423 +R ++ CR+VDEV+ APW ++ + + I V I + D Y + Sbjct: 158 QRCETLTHCRWVDEVVPNAPWCVTPEFLLEHKIDYVAHDDIPY---VSADSDDIYKPIKE 214 Query: 422 MGIFHRLESPLDXXXXXXXXXIVSNHEAYQKRN 324 MG F + I+ +++ Y RN Sbjct: 215 MGKFLTTQRTNGVSTSDIITKIIRDYDKYLMRN 247
>PCY1_CAEEL (P49583) Putative choline-phosphate cytidylyltransferase (EC| 2.7.7.15) (Phosphorylcholine transferase) (CTP:phosphocholine cytidylyltransferase) (CT) (CCT) Length = 362 Score = 32.0 bits (71), Expect = 1.7 Identities = 18/66 (27%), Positives = 28/66 (42%) Frame = -1 Query: 602 ERSLSVLACRYVDEVIIGAPWDISKDMITTFNISLVVQGTIAENMDFAKDESHPYAVPMD 423 ER V CRYVDEV APW + + + + DF ++ PY P + Sbjct: 135 ERYDGVRHCRYVDEVYREAPWFCTVEFLKNLKV------------DFIAHDAIPYVAPGE 182 Query: 422 MGIFHR 405 ++ + Sbjct: 183 EDLYEK 188
>PCY1_PLAFK (P49587) Choline-phosphate cytidylyltransferase (EC 2.7.7.15)| (Phosphorylcholine transferase) (CTP:phosphocholine cytidylyltransferase) (CT) (CCT) Length = 370 Score = 31.2 bits (69), Expect = 2.8 Identities = 13/46 (28%), Positives = 24/46 (52%) Frame = -1 Query: 617 IMNLHERSLSVLACRYVDEVIIGAPWDISKDMITTFNISLVVQGTI 480 + L ER+ ++ R+VDE+I PW ++ + + + I V I Sbjct: 141 VQTLEERTETLKHIRWVDEIISPCPWVVTPEFLEKYKIDYVAHDDI 186
>UBX4_YEAST (P54730) UBX domain-containing protein 4| Length = 416 Score = 31.2 bits (69), Expect = 2.8 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = -1 Query: 611 NLHERSLSVLAC----RYVDEVIIGAPWDISKDMITTFNISLVVQGTIAENMDFAKDESH 444 NL +++ ++ C ++ D I + ++DM T +N+ V Q I ENM F ++SH Sbjct: 267 NLPKKNKAISECLLRVKFPDRSHIQIAFKPNEDMRTVYNV--VSQFLIDENMPFTLNQSH 324 Query: 443 PY 438 P+ Sbjct: 325 PF 326
>IRX2_MOUSE (P81066) Iroquois-class homeodomain protein IRX-2 (Iroquois| homeobox protein 2) (Homeodomain protein IRXA2) Length = 474 Score = 30.4 bits (67), Expect = 4.9 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +2 Query: 17 RGPXTGKMETGSEWRKHLPPPASSPKITTTAWISLGEV 130 RG GK GS PPPAS PK+ + A I+ ++ Sbjct: 306 RGGSGGKTPLGSRTSPGAPPPASKPKLWSLAEIATSDL 343 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,290,853 Number of Sequences: 219361 Number of extensions: 1788792 Number of successful extensions: 3689 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 3589 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3686 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6257125380 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
