ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags7e20 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA Length = 1159 Score = 999 bits (504), Expect = 0.0 Identities = 673/725 (92%), Gaps = 7/725 (0%) Strand = Plus / Minus Query: 1 cttgaattattactgcaaagtgtggctcaacggacaggcactacaccgaccaaagacaaa 60 |||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1093 cttgaattattactgcga-gtgtggctcaacggacaggcactacaccgagcaaagacaaa 1035 Query: 61 attcctcaggaatgaaacacggcagttcttcaaatctaacagactgcgacaacgcgccca 120 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 1034 attcctcaggaatgaaacacggcagttcttcaaatctaacagactgcaacaacgggccca 975 Query: 121 aggcgtgtgaagtatttgtcaaatcgccacgattccatccgaaaccgaggaacacccctg 180 ||| ||||||||||| ||||| |||| ||||| ||||||||||||||||||||||||| Sbjct: 974 agggctgtgaagtatt-gtcaacccgccccgatttcatccgaaaccgaggaacacccctg 916 Query: 181 a----gagttcagaaaagagagggcttgatttcgccatcaaggcttgagagcaatcgcaa 236 | ||| | ||| ||| | |||||||||| ||| ||||||||||||||||||| |||| Sbjct: 915 actgagagcttagagaaggg-gggcttgattccgcaatcaaggcttgagagcaatagcaa 857 Query: 237 tgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcaga 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 856 tgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcaca 797 Query: 297 gcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgc 356 ||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 796 gcgactttggcatgaactcgtgctggatcagcgcgctggccttgccagagttgttgatcc 737 Query: 357 gagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttct 416 | |||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 736 gggccttcacaagggtgagcgggtccagggtatgctgggtgccgaaggtgaggctgttct 677 Query: 417 cgttgctcgagaagctgtgggtcagctccgccccaacagctgtgctggacttctccacaa 476 ||||||| |||||||||||||||||||| |||||||||||||||| ||| |||||||||| Sbjct: 676 cgttgcttgagaagctgtgggtcagctctgccccaacagctgtgccggatttctccacaa 617 Query: 477 agtggtaataggatgcggtgaggctgtctcccttgttgttcaggttcagggatgcgataa 536 ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 616 tgtggtaataggatgcagtcaggctgtctcccttgttgttcaggttcagggatgcgataa 557 Query: 537 gatcttggttagtgtagctaaacgcagcattgtatttggtgaaattcttggtggatgtat 596 |||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||| Sbjct: 556 gatcctggttagtgtagctaagtgcagcattgtatttggcgaaattcttggtggctgtat 497 Query: 597 caagcgacacatcaccaccaacagctagagcactagttccaaacgcagcagagaggttga 656 |||||||||| ||| ||||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 496 caagcgacacgtcagcaccaacagctagagcactagttccgaacgcgccggagaggttga 437 Query: 657 ctacaggattggcagtcaagccaatgcttgcattaataccagcataatcatgtaagtact 716 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 436 ctacaggattggcagtcaagccaatgcttgcattaataccagcataatcatgcaagtact 377 Query: 717 ggagc 721 ||||| Sbjct: 376 ggagc 372
>ref|XM_450604.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1124 Score = 325 bits (164), Expect = 1e-85 Identities = 413/496 (83%) Strand = Plus / Minus Query: 213 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 272 ||||||||||||| || | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 915 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 856 Query: 273 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 332 | || || || |||||||| || | ||||| ||||| |||||||||||| |||||||| Sbjct: 855 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 796 Query: 333 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 392 | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || |||| Sbjct: 795 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 736 Query: 393 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 452 | || |||||||||||| ||||||||||||||||||||||||||||||||| || |||| Sbjct: 735 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 676 Query: 453 cagctgtgctggacttctccacaaagtggtaataggatgcggtgaggctgtctcccttgt 512 |||||||| || | | ||||| ||||||||| ||||| ||||| || |||||||||| Sbjct: 675 cagctgtggccgaatggttcacaatgtggtaataagatgcagtgagactatctcccttgt 616 Query: 513 tgttcaggttcagggatgcgataagatcttggttagtgtagctaaacgcagcattgtatt 572 |||||||||||| || ||||||||||| | ||| || |||| || ||||||| |||| Sbjct: 615 tgttcaggttcaatgacgcgataagatcatcattactgaagctcaatccagcattatatt 556 Query: 573 tggtgaaattcttggtggatgtatcaagcgacacatcaccaccaacagctagagcactag 632 |||| || ||| |||| |||||||| || |||||| |||||||||| ||||| | | Sbjct: 555 tggtcaagttccccgtggcggtatcaagtgagacatcagcaccaacagcaagagccttgg 496 Query: 633 ttccaaacgcagcagagaggttgactacaggattggcagtcaagccaatgcttgcattaa 692 ||||||| || ||||| |||||||||||| |||||||||| ||||| |||||| ||| Sbjct: 495 ttccaaaaacactggagagattgactacaggactggcagtcaaaccaatacttgcactaa 436 Query: 693 taccagcataatcatg 708 ||||||||||||||| Sbjct: 435 caccagcataatcatg 420
>emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent anion channel Length = 1093 Score = 325 bits (164), Expect = 1e-85 Identities = 413/496 (83%) Strand = Plus / Minus Query: 213 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 272 ||||||||||||| || | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 852 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 793 Query: 273 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 332 | || || || |||||||| || | ||||| ||||| |||||||||||| |||||||| Sbjct: 792 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 733 Query: 333 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 392 | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || |||| Sbjct: 732 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 673 Query: 393 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 452 | || |||||||||||| ||||||||||||||||||||||||||||||||| || |||| Sbjct: 672 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 613 Query: 453 cagctgtgctggacttctccacaaagtggtaataggatgcggtgaggctgtctcccttgt 512 |||||||| || | | ||||| ||||||||| ||||| ||||| || |||||||||| Sbjct: 612 cagctgtggccgaatggttcacaatgtggtaataagatgcagtgagactatctcccttgt 553 Query: 513 tgttcaggttcagggatgcgataagatcttggttagtgtagctaaacgcagcattgtatt 572 |||||||||||| || ||||||||||| | ||| || |||| || ||||||| |||| Sbjct: 552 tgttcaggttcaatgacgcgataagatcatcattactgaagctcaatccagcattatatt 493 Query: 573 tggtgaaattcttggtggatgtatcaagcgacacatcaccaccaacagctagagcactag 632 |||| || ||| |||| |||||||| || |||||| |||||||||| ||||| | | Sbjct: 492 tggtcaagttccccgtggcggtatcaagtgagacatcagcaccaacagcaagagccttgg 433 Query: 633 ttccaaacgcagcagagaggttgactacaggattggcagtcaagccaatgcttgcattaa 692 ||||||| || ||||| |||||||||||| |||||||||| ||||| |||||| ||| Sbjct: 432 ttccaaaaacactggagagattgactacaggactggcagtcaaaccaatacttgcactaa 373 Query: 693 taccagcataatcatg 708 ||||||||||||||| Sbjct: 372 caccagcataatcatg 357
>dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C01, full insert sequence Length = 1125 Score = 325 bits (164), Expect = 1e-85 Identities = 413/496 (83%) Strand = Plus / Minus Query: 213 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 272 ||||||||||||| || | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 915 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 856 Query: 273 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 332 | || || || |||||||| || | ||||| ||||| |||||||||||| |||||||| Sbjct: 855 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 796 Query: 333 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 392 | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || |||| Sbjct: 795 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 736 Query: 393 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 452 | || |||||||||||| ||||||||||||||||||||||||||||||||| || |||| Sbjct: 735 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 676 Query: 453 cagctgtgctggacttctccacaaagtggtaataggatgcggtgaggctgtctcccttgt 512 |||||||| || | | ||||| ||||||||| ||||| ||||| || |||||||||| Sbjct: 675 cagctgtggccgaatggttcacaatgtggtaataagatgcagtgagactatctcccttgt 616 Query: 513 tgttcaggttcagggatgcgataagatcttggttagtgtagctaaacgcagcattgtatt 572 |||||||||||| || ||||||||||| | ||| || |||| || ||||||| |||| Sbjct: 615 tgttcaggttcaatgacgcgataagatcatcattactgaagctcaatccagcattatatt 556 Query: 573 tggtgaaattcttggtggatgtatcaagcgacacatcaccaccaacagctagagcactag 632 |||| || ||| |||| |||||||| || |||||| |||||||||| ||||| | | Sbjct: 555 tggtcaagttccccgtggcggtatcaagtgagacatcagcaccaacagcaagagccttgg 496 Query: 633 ttccaaacgcagcagagaggttgactacaggattggcagtcaagccaatgcttgcattaa 692 ||||||| || ||||| |||||||||||| |||||||||| ||||| |||||| ||| Sbjct: 495 ttccaaaaacactggagagattgactacaggactggcagtcaaaccaatacttgcactaa 436 Query: 693 taccagcataatcatg 708 ||||||||||||||| Sbjct: 435 caccagcataatcatg 420
>dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H05, full insert sequence Length = 1242 Score = 325 bits (164), Expect = 1e-85 Identities = 413/496 (83%) Strand = Plus / Minus Query: 213 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 272 ||||||||||||| || | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 929 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 870 Query: 273 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 332 | || || || |||||||| || | ||||| ||||| |||||||||||| |||||||| Sbjct: 869 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 810 Query: 333 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 392 | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || |||| Sbjct: 809 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 750 Query: 393 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 452 | || |||||||||||| ||||||||||||||||||||||||||||||||| || |||| Sbjct: 749 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 690 Query: 453 cagctgtgctggacttctccacaaagtggtaataggatgcggtgaggctgtctcccttgt 512 |||||||| || | | ||||| ||||||||| ||||| ||||| || |||||||||| Sbjct: 689 cagctgtggccgaatggttcacaatgtggtaataagatgcagtgagactatctcccttgt 630 Query: 513 tgttcaggttcagggatgcgataagatcttggttagtgtagctaaacgcagcattgtatt 572 |||||||||||| || ||||||||||| | ||| || |||| || ||||||| |||| Sbjct: 629 tgttcaggttcaatgacgcgataagatcatcattactgaagctcaatccagcattatatt 570 Query: 573 tggtgaaattcttggtggatgtatcaagcgacacatcaccaccaacagctagagcactag 632 |||| || ||| |||| |||||||| || |||||| |||||||||| ||||| | | Sbjct: 569 tggtcaagttccccgtggcggtatcaagtgagacatcagcaccaacagcaagagccttgg 510 Query: 633 ttccaaacgcagcagagaggttgactacaggattggcagtcaagccaatgcttgcattaa 692 ||||||| || ||||| |||||||||||| |||||||||| ||||| |||||| ||| Sbjct: 509 ttccaaaaacactggagagattgactacaggactggcagtcaaaccaatacttgcactaa 450 Query: 693 taccagcataatcatg 708 ||||||||||||||| Sbjct: 449 caccagcataatcatg 434
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 240 bits (121), Expect = 5e-60 Identities = 259/305 (84%) Strand = Plus / Minus Query: 213 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 272 ||||||||||||| || | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 11754957 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 11754898 Query: 273 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 332 | || || || |||||||| || | ||||| ||||| |||||||||||| |||||||| Sbjct: 11754897 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 11754838 Query: 333 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 392 | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || |||| Sbjct: 11754837 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 11754778 Query: 393 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 452 | || |||||||||||| ||||||||||||||||||||||||||||||||| || |||| Sbjct: 11754777 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 11754718 Query: 453 cagctgtgctggacttctccacaaagtggtaataggatgcggtgaggctgtctcccttgt 512 |||||||| || | | ||||| ||||||||| ||||| ||||| || |||||||||| Sbjct: 11754717 cagctgtggccgaatggttcacaatgtggtaataagatgcagtgagactatctcccttgt 11754658 Query: 513 tgttc 517 ||||| Sbjct: 11754657 tgttc 11754653 Score = 87.7 bits (44), Expect = 5e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 593 gtatcaagcgacacatcaccaccaacagctagagcactagttccaaacgcagcagagagg 652 |||||||| || |||||| |||||||||| ||||| | |||||||| || ||||| Sbjct: 11753933 gtatcaagtgagacatcagcaccaacagcaagagccttggttccaaaaacactggagaga 11753874 Query: 653 ttgactacaggattggcagtcaagccaatgcttgcattaataccagcataatcatg 708 |||||||||||| |||||||||| ||||| |||||| ||| ||||||||||||||| Sbjct: 11753873 ttgactacaggactggcagtcaaaccaatacttgcactaacaccagcataatcatg 11753818
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 240 bits (121), Expect = 5e-60 Identities = 259/305 (84%) Strand = Plus / Minus Query: 213 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 272 ||||||||||||| || | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 189591 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 189532 Query: 273 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 332 | || || || |||||||| || | ||||| ||||| |||||||||||| |||||||| Sbjct: 189531 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 189472 Query: 333 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 392 | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || |||| Sbjct: 189471 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 189412 Query: 393 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 452 | || |||||||||||| ||||||||||||||||||||||||||||||||| || |||| Sbjct: 189411 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 189352 Query: 453 cagctgtgctggacttctccacaaagtggtaataggatgcggtgaggctgtctcccttgt 512 |||||||| || | | ||||| ||||||||| ||||| ||||| || |||||||||| Sbjct: 189351 cagctgtggccgaatggttcacaatgtggtaataagatgcagtgagactatctcccttgt 189292 Query: 513 tgttc 517 ||||| Sbjct: 189291 tgttc 189287 Score = 87.7 bits (44), Expect = 5e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 593 gtatcaagcgacacatcaccaccaacagctagagcactagttccaaacgcagcagagagg 652 |||||||| || |||||| |||||||||| ||||| | |||||||| || ||||| Sbjct: 188567 gtatcaagtgagacatcagcaccaacagcaagagccttggttccaaaaacactggagaga 188508 Query: 653 ttgactacaggattggcagtcaagccaatgcttgcattaataccagcataatcatg 708 |||||||||||| |||||||||| ||||| |||||| ||| ||||||||||||||| Sbjct: 188507 ttgactacaggactggcagtcaaaccaatacttgcactaacaccagcataatcatg 188452
>dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126C04, full insert sequence Length = 3071 Score = 240 bits (121), Expect = 5e-60 Identities = 259/305 (84%) Strand = Plus / Minus Query: 213 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 272 ||||||||||||| || | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 2862 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 2803 Query: 273 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 332 | || || || |||||||| || | ||||| ||||| |||||||||||| |||||||| Sbjct: 2802 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 2743 Query: 333 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatgct 392 | |||||||| || ||||||| ||| |||||||||| ||| |||||||| || || |||| Sbjct: 2742 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtcgagagtgtgct 2683 Query: 393 gagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgccccaa 452 | || |||||||||||| ||||||||||||||||||||||||||||||||| || |||| Sbjct: 2682 gggtaccgaaggtgagggagttctcgttgctcgagaagctgtgggtcagctcagctccaa 2623 Query: 453 cagctgtgctggacttctccacaaagtggtaataggatgcggtgaggctgtctcccttgt 512 |||||||| || | | ||||| ||||||||| ||||| ||||| || |||||||||| Sbjct: 2622 cagctgtggccgaatggttcacaatgtggtaataagatgcagtgagactatctcccttgt 2563 Query: 513 tgttc 517 ||||| Sbjct: 2562 tgttc 2558 Score = 87.7 bits (44), Expect = 5e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 593 gtatcaagcgacacatcaccaccaacagctagagcactagttccaaacgcagcagagagg 652 |||||||| || |||||| |||||||||| ||||| | |||||||| || ||||| Sbjct: 1838 gtatcaagtgagacatcagcaccaacagcaagagccttggttccaaaaacactggagaga 1779 Query: 653 ttgactacaggattggcagtcaagccaatgcttgcattaataccagcataatcatg 708 |||||||||||| |||||||||| ||||| |||||| ||| ||||||||||||||| Sbjct: 1778 ttgactacaggactggcagtcaaaccaatacttgcactaacaccagcataatcatg 1723
>gb|AF178950.1|AF178950 Zea mays voltage-dependent anion channel protein 1a (vdac1a) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1179 Score = 182 bits (92), Expect = 1e-42 Identities = 194/228 (85%) Strand = Plus / Minus Query: 233 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 292 ||||| || |||||||||||||||||||||| ||| ||||| ||||| |||||||||||| Sbjct: 904 gcaatcccaaccttcgagctcttctcgatggtctttgtgtcgacctcggccgagatggtg 845 Query: 293 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 352 |||||||| ||||| |||||||||||||||| || || ||||||||||||||||| Sbjct: 844 accagcgactttggcctccactcgtgctggatcagggcactggccttgccagagttgtta 785 Query: 353 atgcgagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctg 412 ||||| ||||||| || ||| || ||||| |||| ||||| ||| ||||||||| || Sbjct: 784 atgcgggccttcaagacggttagtgggtccagggcgtgctgcccgccaaaggtgagggtg 725 Query: 413 ttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 460 || || ||| |||||||||||||||| ||||| ||||||||||||||| Sbjct: 724 ttttcattggtcgagaagctgtgggtaagctctgccccaacagctgtg 677 Score = 129 bits (65), Expect = 1e-26 Identities = 185/225 (82%) Strand = Plus / Minus Query: 497 aggctgtctcccttgttgttcaggttcagggatgcgataagatcttggttagtgtagcta 556 ||||||||||||||||||||||||||||||||||||| ||| |||| | |||| | || Sbjct: 637 aggctgtctcccttgttgttcaggttcagggatgcgacaaggtcttcatgagtgaacctc 578 Query: 557 aacgcagcattgtatttggtgaaattcttggtggatgtatcaagcgacacatcaccacca 616 | |||||||||||||| || || ||| || | |||||||| || | ||| ||||| Sbjct: 577 agtgcagcattgtatttagtcaagttcccagttgcagtatcaagtgagatatcggcacca 518 Query: 617 acagctagagcactagttccaaacgcagcagagaggttgactacaggattggcagtcaag 676 | || | ||| |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 517 agtgcaacagccttagtaccaaaggcagcagagaggttgactacaggattggctgtcaga 458 Query: 677 ccaatgcttgcattaataccagcataatcatgtaagtactggagc 721 || ||||||||||||| |||||||||||||| || ||||||||| Sbjct: 457 ccgatgcttgcattaactccagcataatcatgcaaatactggagc 413
>gb|AY104870.1| Zea mays PCO081914 mRNA sequence Length = 1445 Score = 182 bits (92), Expect = 1e-42 Identities = 194/228 (85%) Strand = Plus / Minus Query: 233 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 292 ||||| || |||||||||||||||||||||| ||| ||||| ||||| |||||||||||| Sbjct: 1015 gcaatcccaaccttcgagctcttctcgatggtctttgtgtcgacctcggccgagatggtg 956 Query: 293 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 352 |||||||| ||||| |||||||||||||||| || || ||||||||||||||||| Sbjct: 955 accagcgactttggcctccactcgtgctggatcagggcactggccttgccagagttgtta 896 Query: 353 atgcgagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctg 412 ||||| ||||||| || ||| || ||||| |||| ||||| ||| ||||||||| || Sbjct: 895 atgcgggccttcaagacggttagtgggtccagggcgtgctgcccgccaaaggtgagggtg 836 Query: 413 ttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 460 || || ||| |||||||||||||||| ||||| ||||||||||||||| Sbjct: 835 ttttcattggtcgagaagctgtgggtaagctctgccccaacagctgtg 788 Score = 137 bits (69), Expect = 6e-29 Identities = 186/225 (82%) Strand = Plus / Minus Query: 497 aggctgtctcccttgttgttcaggttcagggatgcgataagatcttggttagtgtagcta 556 ||||||||||||||||||||||||||||||||||||| ||| |||| | |||| | || Sbjct: 748 aggctgtctcccttgttgttcaggttcagggatgcgacaaggtcttcatgagtgaacctc 689 Query: 557 aacgcagcattgtatttggtgaaattcttggtggatgtatcaagcgacacatcaccacca 616 | |||||||||||||| || || ||| || | |||||||| || | ||| ||||| Sbjct: 688 agtgcagcattgtatttagtcaagttcccagttgcagtatcaagtgagatatcggcacca 629 Query: 617 acagctagagcactagttccaaacgcagcagagaggttgactacaggattggcagtcaag 676 || || | ||| |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 628 actgcaacagccttagtaccaaaggcagcagagaggttgactacaggattggctgtcaga 569 Query: 677 ccaatgcttgcattaataccagcataatcatgtaagtactggagc 721 || ||||||||||||| |||||||||||||| || ||||||||| Sbjct: 568 ccgatgcttgcattaactccagcataatcatgcaaatactggagc 524
>gb|BT016491.1| Zea mays clone Contig324 mRNA sequence Length = 1330 Score = 167 bits (84), Expect = 6e-38 Identities = 192/228 (84%) Strand = Plus / Minus Query: 233 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 292 ||||| |||||||||||||||||||| |||| ||| || || ||||| |||||||||||| Sbjct: 964 gcaattccgaccttcgagctcttctcaatggtctttgtatcgacctcagccgagatggtg 905 Query: 293 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 352 |||||||| ||||| |||| ||||||||||| ||||| || ||||||||||||||| Sbjct: 904 accagcgactttggcctccactcatgctggatcagggcgctggctttgccagagttgttg 845 Query: 353 atgcgagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctg 412 ||||| ||||||| || ||| || ||||| || || ||||| ||| ||||||||| || Sbjct: 844 atgcgtgccttcaagacggttagtgggtccagagtgtgctgcccgccaaaggtgagggtg 785 Query: 413 ttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 460 || || ||| ||||||| |||||||| ||||| ||||||||||||||| Sbjct: 784 ttttcattggtcgagaaactgtgggtaagctctgccccaacagctgtg 737 Score = 89.7 bits (45), Expect = 1e-14 Identities = 174/217 (80%) Strand = Plus / Minus Query: 501 tgtctcccttgttgttcaggttcagggatgcgataagatcttggttagtgtagctaaacg 560 |||||||||||||||||| || |||||||||||||| |||| | |||| | | || Sbjct: 693 tgtctcccttgttgttcatattaagggatgcgataaggtcttcatgagtgaacatcaatc 634 Query: 561 cagcattgtatttggtgaaattcttggtggatgtatcaagcgacacatcaccaccaacag 620 ||||||||||||||||||| ||| |||| | ||||| || | || ||||||| | Sbjct: 633 cagcattgtatttggtgaagttcccagtggcagaatcaaatgagatctctgcaccaactg 574 Query: 621 ctagagcactagttccaaacgcagcagagaggttgactacaggattggcagtcaagccaa 680 | ||||| |||| ||||| ||||||||||||||| ||||||||||||| |||| | || Sbjct: 573 cgagagccttagtgccaaaagcagcagagaggttggctacaggattggctgtcagactaa 514 Query: 681 tgcttgcattaataccagcataatcatgtaagtactg 717 ||||||||||| |||||||||||||| || ||||| Sbjct: 513 cgcttgcattaactccagcataatcatgcaaatactg 477
>gb|BT016888.1| Zea mays clone Contig721 mRNA sequence Length = 1209 Score = 151 bits (76), Expect = 4e-33 Identities = 190/228 (83%) Strand = Plus / Plus Query: 233 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 292 ||||| || |||||||||||||||||||||| ||| | ||| ||||| |||||||||| | Sbjct: 289 gcaatcccaaccttcgagctcttctcgatgggctttgggtcgacctcggccgagatgggg 348 Query: 293 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 352 |||||||| ||||| |||||||||||||||| || || ||||||||||||||||| Sbjct: 349 accagcgactttggcctccactcgtgctggatcagggcactggccttgccagagttgtta 408 Query: 353 atgcgagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctg 412 ||||| ||||||| || || || ||||| |||| ||||| ||| |||| |||| || Sbjct: 409 atgcgggccttcaagacgggtagggggtccagggcgtgctgcccgccaaaggggagggtg 468 Query: 413 ttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 460 || || ||| |||||||||||||||| ||||| ||||||||||||||| Sbjct: 469 ttttcattggtcgagaagctgtgggtaagctctgccccaacagctgtg 516 Score = 121 bits (61), Expect = 3e-24 Identities = 184/225 (81%) Strand = Plus / Plus Query: 497 aggctgtctcccttgttgttcaggttcagggatgcgataagatcttggttagtgtagcta 556 |||||| | |||||||||||||||||||||||||||| ||| |||| | |||| | || Sbjct: 556 aggctggcgcccttgttgttcaggttcagggatgcgacaaggtcttcatgagtgaacctc 615 Query: 557 aacgcagcattgtatttggtgaaattcttggtggatgtatcaagcgacacatcaccacca 616 | |||||||||||||| || || ||| || | |||||||| || | ||| ||||| Sbjct: 616 agtgcagcattgtatttagtcaagttcccagttgcagtatcaagtgagatatcggcacca 675 Query: 617 acagctagagcactagttccaaacgcagcagagaggttgactacaggattggcagtcaag 676 || || | ||| |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 676 actgcaacagccttagtaccaaaggcagcagagaggttgactacaggattggctgtcaga 735 Query: 677 ccaatgcttgcattaataccagcataatcatgtaagtactggagc 721 || ||||||||||||| |||||||||||||| || ||||||||| Sbjct: 736 ccgatgcttgcattaactccagcataatcatgcaaatactggagc 780
>ref|XM_475771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Minus Query: 242 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 301 ||||| |||||||| |||||||||||||| || ||||| | ||||||||| ||||||| Sbjct: 815 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 756 Query: 302 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 361 || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| ||| Sbjct: 755 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 696 Query: 362 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 421 ||||| ||||| || |||| |||||| || ||||||||||| ||||||||||| Sbjct: 695 ttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgagagtgttctcgttg 636 Query: 422 ctcgagaagctgtgggtcagctccgccccaacagc 456 |||||||||||||| | |||||| || |||||||| Sbjct: 635 ctcgagaagctgtgagccagctctgctccaacagc 601 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 497 aggctgtctcccttgttgttcag 519 ||||||||||||||||||||||| Sbjct: 563 aggctgtctcccttgttgttcag 541
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Minus Query: 242 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 301 ||||| |||||||| |||||||||||||| || ||||| | ||||||||| ||||||| Sbjct: 69046 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 68987 Query: 302 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 361 || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| ||| Sbjct: 68986 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 68927 Query: 362 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 421 ||||| ||||| || |||| |||||| || ||||||||||| ||||||||||| Sbjct: 68926 ttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgagagtgttctcgttg 68867 Query: 422 ctcgagaagctgtgggtcagctccgccccaacagc 456 |||||||||||||| | |||||| || |||||||| Sbjct: 68866 ctcgagaagctgtgagccagctctgctccaacagc 68832 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 aggctgtctcccttgttgttc 517 ||||||||||||||||||||| Sbjct: 68794 aggctgtctcccttgttgttc 68774
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Minus Query: 242 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 301 ||||| |||||||| |||||||||||||| || ||||| | ||||||||| ||||||| Sbjct: 26424355 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 26424296 Query: 302 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 361 || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| ||| Sbjct: 26424295 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 26424236 Query: 362 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 421 ||||| ||||| || |||| |||||| || ||||||||||| ||||||||||| Sbjct: 26424235 ttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgagagtgttctcgttg 26424176 Query: 422 ctcgagaagctgtgggtcagctccgccccaacagc 456 |||||||||||||| | |||||| || |||||||| Sbjct: 26424175 ctcgagaagctgtgagccagctctgctccaacagc 26424141 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 aggctgtctcccttgttgttc 517 ||||||||||||||||||||| Sbjct: 26424103 aggctgtctcccttgttgttc 26424083 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 aggctgtctcccttgttgttc 517 ||||||||||||||||||||| Sbjct: 25619645 aggctgtctcccttgttgttc 25619625
>emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent anion channel (VDAC2 gene) Length = 1189 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Minus Query: 242 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 301 ||||| |||||||| |||||||||||||| || ||||| | ||||||||| ||||||| Sbjct: 854 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 795 Query: 302 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 361 || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| ||| Sbjct: 794 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 735 Query: 362 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 421 ||||| ||||| || |||| |||||| || ||||||||||| ||||||||||| Sbjct: 734 ttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgagagtgttctcgttg 675 Query: 422 ctcgagaagctgtgggtcagctccgccccaacagc 456 |||||||||||||| | |||||| || |||||||| Sbjct: 674 ctcgagaagctgtgagccagctctgctccaacagc 640 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 497 aggctgtctcccttgttgttcag 519 ||||||||||||||||||||||| Sbjct: 602 aggctgtctcccttgttgttcag 580
>dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K13, full insert sequence Length = 1231 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Minus Query: 242 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 301 ||||| |||||||| |||||||||||||| || ||||| | ||||||||| ||||||| Sbjct: 898 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 839 Query: 302 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 361 || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| ||| Sbjct: 838 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 779 Query: 362 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 421 ||||| ||||| || |||| |||||| || ||||||||||| ||||||||||| Sbjct: 778 ttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgagagtgttctcgttg 719 Query: 422 ctcgagaagctgtgggtcagctccgccccaacagc 456 |||||||||||||| | |||||| || |||||||| Sbjct: 718 ctcgagaagctgtgagccagctctgctccaacagc 684 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 497 aggctgtctcccttgttgttcag 519 ||||||||||||||||||||||| Sbjct: 646 aggctgtctcccttgttgttcag 624
>gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel protein 1b (vdac1b) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1175 Score = 143 bits (72), Expect = 9e-31 Identities = 189/228 (82%) Strand = Plus / Minus Query: 233 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 292 ||||| || ||||||||||||||||| |||| ||| || || ||||| |||||||||||| Sbjct: 959 gcaattccaaccttcgagctcttctcaatggtctttgtatcgacctcagccgagatggtg 900 Query: 293 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 352 |||||||| ||||| |||| ||||||||||| |||| || ||||| ||||||||| Sbjct: 899 accagcgactttggcctccactcatgctggatcaggacgctggctttgcccgagttgttg 840 Query: 353 atgcgagccttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctg 412 ||||| ||||||| || ||| || ||||| || || ||||| ||| ||||||||| || Sbjct: 839 atgcgtgccttcaagacggttagtgggtccagagtgtgctgcccgccaaaggtgagggtg 780 Query: 413 ttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 460 || || ||| ||||||| |||||||| ||||| ||||||||||||||| Sbjct: 779 ttttcattggtcgagaaactgtgggtaagctctgccccaacagctgtg 732 Score = 81.8 bits (41), Expect = 3e-12 Identities = 173/217 (79%) Strand = Plus / Minus Query: 501 tgtctcccttgttgttcaggttcagggatgcgataagatcttggttagtgtagctaaacg 560 |||||||||||||||||| || |||||||||||||| |||| | |||| | | || Sbjct: 688 tgtctcccttgttgttcatattaagggatgcgataaggtcttcatgagtgaacatcaatc 629 Query: 561 cagcattgtatttggtgaaattcttggtggatgtatcaagcgacacatcaccaccaacag 620 ||||||||||||||||||| ||| |||| | ||||| || | || ||||||| | Sbjct: 628 cagcattgtatttggtgaagttcccagtggcagaatcaaatgagatttctgcaccaactg 569 Query: 621 ctagagcactagttccaaacgcagcagagaggttgactacaggattggcagtcaagccaa 680 | ||||| |||| ||||| |||||||||||||| ||||||||||||| |||| | || Sbjct: 568 cgagagccttagtgccaaagccagcagagaggttggctacaggattggctgtcagactaa 509 Query: 681 tgcttgcattaataccagcataatcatgtaagtactg 717 ||||||||||| |||||||||||||| || ||||| Sbjct: 508 cgcttgcattaactccagcataatcatgcaaatactg 472
>gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel protein 2 (vdac2) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1129 Score = 135 bits (68), Expect = 2e-28 Identities = 167/200 (83%) Strand = Plus / Minus Query: 242 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 301 ||||| |||||||||||||||||||||||||||||||||| ||||||||| || ||| Sbjct: 889 accttagagctcttctcgatggccttggtgtccacctccgtggagatggtgaccagtgac 830 Query: 302 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 361 || ||||| ||||||| |||||||| || |||||| |||| ||||||||| ||| ||| Sbjct: 829 ttgggcctccactcgtgttggatcagtgcacttgccatgccgtagttgttgaagcgtgcc 770 Query: 362 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 421 ||||| ||| || ||||| |||| |||||| || || ||||||| | ||||| ||||| Sbjct: 769 ttcacagtggtcagagggtccagggcatgctgcgtcccaaaggtgatggtgttcccgttg 710 Query: 422 ctcgagaagctgtgggtcag 441 |||||||||||||| |||| Sbjct: 709 gtcgagaagctgtggctcag 690
>gb|AY104198.1| Zea mays PCO099812 mRNA sequence Length = 1156 Score = 135 bits (68), Expect = 2e-28 Identities = 167/200 (83%) Strand = Plus / Minus Query: 242 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 301 ||||| |||||||||||||||||||||||||||||||||| ||||||||| || ||| Sbjct: 923 accttagagctcttctcgatggccttggtgtccacctccgtggagatggtgaccagtgac 864 Query: 302 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 361 || ||||| ||||||| |||||||| || |||||| |||| ||||||||| ||| ||| Sbjct: 863 ttgggcctccactcgtgttggatcagtgcacttgccatgccgtagttgttgaagcgtgcc 804 Query: 362 ttcacgagggtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttg 421 ||||| ||| || ||||| |||| |||||| || || ||||||| | ||||| ||||| Sbjct: 803 ttcacagtggtcagagggtccagggcatgctgcgtcccaaaggtgatggtgttcccgttg 744 Query: 422 ctcgagaagctgtgggtcag 441 |||||||||||||| |||| Sbjct: 743 gtcgagaagctgtggctcag 724
>ref|NM_191753.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 73.8 bits (37), Expect = 7e-10 Identities = 118/145 (81%) Strand = Plus / Minus Query: 312 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgaggg 371 ||||||||||||| || ||||| || |||| ||||||| ||| ||||||||| | Sbjct: 856 actcgtgctggatgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtag 797 Query: 372 tgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaagc 431 |||| ||||| |||| ||||| | |||||| ||||| ||||||| ||| ||||||||| Sbjct: 796 tgagagggtccagggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagc 737 Query: 432 tgtgggtcagctccgccccaacagc 456 |||||||||||||||| ||| |||| Sbjct: 736 tgtgggtcagctccgctccagcagc 712
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 73.8 bits (37), Expect = 7e-10 Identities = 118/145 (81%) Strand = Plus / Plus Query: 312 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgaggg 371 ||||||||||||| || ||||| || |||| ||||||| ||| ||||||||| | Sbjct: 29763836 actcgtgctggatgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtag 29763895 Query: 372 tgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaagc 431 |||| ||||| |||| ||||| | |||||| ||||| ||||||| ||| ||||||||| Sbjct: 29763896 tgagagggtccagggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagc 29763955 Query: 432 tgtgggtcagctccgccccaacagc 456 |||||||||||||||| ||| |||| Sbjct: 29763956 tgtgggtcagctccgctccagcagc 29763980 Score = 52.0 bits (26), Expect = 0.003 Identities = 98/122 (80%) Strand = Plus / Plus Query: 245 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 304 |||| ||||||||| || ||||||||||| ||||| | ||||||||| ||||| || Sbjct: 22904687 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 22904746 Query: 305 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 364 || | | || ||||||| |||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 22904747 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 22904806 Query: 365 ac 366 || Sbjct: 22904807 ac 22904808
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 73.8 bits (37), Expect = 7e-10 Identities = 118/145 (81%) Strand = Plus / Plus Query: 312 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgaggg 371 ||||||||||||| || ||||| || |||| ||||||| ||| ||||||||| | Sbjct: 7931 actcgtgctggatgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtag 7990 Query: 372 tgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaagc 431 |||| ||||| |||| ||||| | |||||| ||||| ||||||| ||| ||||||||| Sbjct: 7991 tgagagggtccagggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagc 8050 Query: 432 tgtgggtcagctccgccccaacagc 456 |||||||||||||||| ||| |||| Sbjct: 8051 tgtgggtcagctccgctccagcagc 8075
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 73.8 bits (37), Expect = 7e-10 Identities = 118/145 (81%) Strand = Plus / Plus Query: 312 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgaggg 371 ||||||||||||| || ||||| || |||| ||||||| ||| ||||||||| | Sbjct: 93567 actcgtgctggatgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtag 93626 Query: 372 tgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaagc 431 |||| ||||| |||| ||||| | |||||| ||||| ||||||| ||| ||||||||| Sbjct: 93627 tgagagggtccagggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagc 93686 Query: 432 tgtgggtcagctccgccccaacagc 456 |||||||||||||||| ||| |||| Sbjct: 93687 tgtgggtcagctccgctccagcagc 93711
>gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, complete cds Length = 1203 Score = 60.0 bits (30), Expect = 1e-05 Identities = 162/206 (78%) Strand = Plus / Minus Query: 251 ctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcctg 310 ||||| || |||||||||||||| |||||| | |||||||| ||| ||||| || | Sbjct: 873 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 814 Query: 311 aactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgagg 370 ||||||||||||| || || ||||||||||| ||||||||| ||||| |||| | Sbjct: 813 cactcgtgctggatgagagcacttgccttgccgaagttgttgacacgagctttcaatgtg 754 Query: 371 gtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaag 430 || | ||||| | | |||||| ||||| | ||||||| ||||||| || | ||||| Sbjct: 753 gtcaatgggtccaatgcatgctgggtgccaagggtgagggtgttctcattagttgagaac 694 Query: 431 ctgtgggtcagctccgccccaacagc 456 |||||||||| ||| ||||||||||| Sbjct: 693 ctgtgggtcacctcagccccaacagc 668
>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199, complete sequence Length = 123325 Score = 60.0 bits (30), Expect = 1e-05 Identities = 162/206 (78%) Strand = Plus / Plus Query: 251 ctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcctg 310 ||||| || |||||||||||||| |||||| | |||||||| ||| ||||| || | Sbjct: 119488 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 119547 Query: 311 aactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgagg 370 ||||||||||||| || || ||||||||||| ||||||||| ||||| |||| | Sbjct: 119548 cactcgtgctggatgagagcacttgccttgccgaagttgttgacacgagctttcaatgtg 119607 Query: 371 gtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaag 430 || | ||||| | | |||||| ||||| | ||||||| ||||||| || | ||||| Sbjct: 119608 gtcaatgggtccaatgcatgctgggtgccaagggtgagggtgttctcattagttgagaac 119667 Query: 431 ctgtgggtcagctccgccccaacagc 456 |||||||||| ||| ||||||||||| Sbjct: 119668 ctgtgggtcacctcagccccaacagc 119693
>dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13M13, TM0051b, complete sequence Length = 54022 Score = 60.0 bits (30), Expect = 1e-05 Identities = 162/206 (78%) Strand = Plus / Minus Query: 251 ctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcctg 310 ||||| || |||||||||||||| |||||| | |||||||| ||| ||||| || | Sbjct: 8730 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 8671 Query: 311 aactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcacgagg 370 ||||||||||||| || || ||||||||||| ||||||||| ||||| |||| | Sbjct: 8670 cactcgtgctggatgagagcacttgccttgccgaagttgttgacacgagctttcaatgtg 8611 Query: 371 gtgagcgggtctagggtatgctgagtgccgaaggtgaggctgttctcgttgctcgagaag 430 || | ||||| | | |||||| ||||| | ||||||| ||||||| || | ||||| Sbjct: 8610 gtcaatgggtccaatgcatgctgggtgccaagggtgagggtgttctcattagttgagaac 8551 Query: 431 ctgtgggtcagctccgccccaacagc 456 |||||||||| ||| ||||||||||| Sbjct: 8550 ctgtgggtcacctcagccccaacagc 8525
>emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent anion channel Length = 1174 Score = 54.0 bits (27), Expect = 7e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 250 gctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcct 309 ||||||||| |||||||||||||| ||||| | |||| |||| ||| ||||| ||||| Sbjct: 786 gctcttctcaatggccttggtgtcaacctcggtggagaaggtgatgagagacttgggcct 727 Query: 310 gaactcgtgctggatcagcgcgcttgc 336 || |||||||||| ||||| ||||| Sbjct: 726 ccacgcgtgctggatgagcgcacttgc 700 Score = 50.1 bits (25), Expect = 0.010 Identities = 61/73 (83%) Strand = Plus / Minus Query: 507 ccttgttgttcaggttcagggatgcgataagatcttggttagtgtagctaaacgcagcat 566 ||||||||||||| |||| || || |||||||||||||||||| ||| | |||||| Sbjct: 532 ccttgttgttcagattcaacgaagcagtaagatcttggttagtgtggctcagtccagcat 473 Query: 567 tgtatttggtgaa 579 |||| |||||||| Sbjct: 472 tgtacttggtgaa 460 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 411 tgttctcgttgctcgagaagctgtg 435 ||||||||||||| ||||||||||| Sbjct: 625 tgttctcgttgcttgagaagctgtg 601
>gb|U50900.1|SOU50900 Spinacia oleracea voltage-dependent anion channel protein (SVDAC1) mRNA, complete cds Length = 1180 Score = 54.0 bits (27), Expect = 7e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 422 ctcgagaagctgtgggtcagctccgccccaacagctgtg 460 ||||||||||||||| ||| |||||| |||||||||||| Sbjct: 687 ctcgagaagctgtggctcaactccgcgccaacagctgtg 649
>ref|NM_192554.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 828 Score = 52.0 bits (26), Expect = 0.003 Identities = 98/122 (80%) Strand = Plus / Minus Query: 245 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 304 |||| ||||||||| || ||||||||||| ||||| | ||||||||| ||||| || Sbjct: 797 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 738 Query: 305 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 364 || | | || ||||||| |||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 737 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 678 Query: 365 ac 366 || Sbjct: 677 ac 676
>gb|BT014102.1| Lycopersicon esculentum clone 133206R, mRNA sequence Length = 1133 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 411 tgttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 460 ||||||| ||||| ||||||||||| |||| ||| || |||||||||||| Sbjct: 709 tgttctcattgcttgagaagctgtgagtcaactctgcaccaacagctgtg 660
>gb|AC137994.19| Medicago truncatula clone mth2-23f15, complete sequence Length = 131563 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Plus Query: 312 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttca 365 ||||||||||||| || || ||||||||| | |||||| |||||||| |||||| Sbjct: 72077 actcgtgctggataagggcacttgccttggctgagttggtgatgcgacccttca 72130
>emb|X80388.1|STPORIN3 S.tuberosum pPOM36I mRNA for 36kDA porinI Length = 1030 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 411 tgttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 460 ||||||| ||||| ||||||||||| |||| ||| || |||||||||||| Sbjct: 637 tgttctcattgcttgagaagctgtgagtcaactctgcaccaacagctgtg 588
>emb|X80387.1|STPORIN2 S.tuberosum pPOM36II mRNA for 36kDa porinII Length = 1060 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 411 tgttctcgttgctcgagaagctgtgggtcagctccgccccaacagctgtg 460 ||||||| ||||| ||||||||||| |||| ||| || |||||||||||| Sbjct: 677 tgttctcattgcttgagaagctgtgagtcaactctgcaccaacagctgtg 628
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 52.0 bits (26), Expect = 0.003 Identities = 98/122 (80%) Strand = Plus / Plus Query: 245 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 304 |||| ||||||||| || ||||||||||| ||||| | ||||||||| ||||| || Sbjct: 108244 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 108303 Query: 305 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 364 || | | || ||||||| |||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 108304 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 108363 Query: 365 ac 366 || Sbjct: 108364 ac 108365
>emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent anion channel (VDAC3 gene) Length = 1148 Score = 52.0 bits (26), Expect = 0.003 Identities = 98/122 (80%) Strand = Plus / Minus Query: 245 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 304 |||| ||||||||| || ||||||||||| ||||| | ||||||||| ||||| || Sbjct: 870 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 811 Query: 305 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 364 || | | || ||||||| |||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 810 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 751 Query: 365 ac 366 || Sbjct: 750 ac 749
>dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B06, full insert sequence Length = 1151 Score = 52.0 bits (26), Expect = 0.003 Identities = 98/122 (80%) Strand = Plus / Minus Query: 245 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 304 |||| ||||||||| || ||||||||||| ||||| | ||||||||| ||||| || Sbjct: 875 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 816 Query: 305 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 364 || | | || ||||||| |||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 815 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 756 Query: 365 ac 366 || Sbjct: 755 ac 754
>dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B09, full insert sequence Length = 1160 Score = 52.0 bits (26), Expect = 0.003 Identities = 98/122 (80%) Strand = Plus / Minus Query: 245 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 304 |||| ||||||||| || ||||||||||| ||||| | ||||||||| ||||| || Sbjct: 886 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 827 Query: 305 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 364 || | | || ||||||| |||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 826 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 767 Query: 365 ac 366 || Sbjct: 766 ac 765
>dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068C08, full insert sequence Length = 1216 Score = 52.0 bits (26), Expect = 0.003 Identities = 98/122 (80%) Strand = Plus / Minus Query: 245 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 304 |||| ||||||||| || ||||||||||| ||||| | ||||||||| ||||| || Sbjct: 930 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 871 Query: 305 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 364 || | | || ||||||| |||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 870 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 811 Query: 365 ac 366 || Sbjct: 810 ac 809
>gb|AY316738.1| Lotus corniculatus var. japonicus VDAC1.2 mRNA, complete cds Length = 1103 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 312 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcac 366 |||| |||||||| || || ||||||||||| |||||||| |||||||||||| Sbjct: 760 actcatgctggataagagcatttgccttgccaaggttgttgacgcgagccttcac 706
>dbj|AP006692.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT06K23, TM0391, complete sequence Length = 98505 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 312 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcac 366 |||| |||||||| || || ||||||||||| |||||||| |||||||||||| Sbjct: 30950 actcatgctggataagagcatttgccttgccaaggttgttgacgcgagccttcac 30896
>dbj|AB033632.1| Meriones unguiculatus TP53 mRNA for p53, complete cds Length = 1173 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 429 agctgtgggtcagctccgcccca 451 ||||||||||||||||||||||| Sbjct: 410 agctgtgggtcagctccgcccca 432
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 aggctgtctcccttgttgttc 517 ||||||||||||||||||||| Sbjct: 136052 aggctgtctcccttgttgttc 136032
>gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07, complete sequence Length = 147122 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 aggctgtctcccttgttgttc 517 ||||||||||||||||||||| Sbjct: 32014 aggctgtctcccttgttgttc 31994
>emb|AL162273.13| Human DNA sequence from clone RP11-215N21 on chromosome 10 Contains the 3' end of a novel gene and a CpG island, complete sequence Length = 103011 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 686 gcattaataccagcataatcatgtaagta 714 |||||||||||| |||||| ||||||||| Sbjct: 47308 gcattaataccatcataatgatgtaagta 47336
>gb|AC108726.9| Homo sapiens 3 BAC RP11-385G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 36019 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 gagttcagaaaagagagggct 202 ||||||||||||||||||||| Sbjct: 24224 gagttcagaaaagagagggct 24244
>gb|AC009386.14| Homo sapiens 12 BAC RP11-447I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164012 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 686 gcattaataccagcataatcatgtaagta 714 |||||||||||| |||||| ||||||||| Sbjct: 83885 gcattaataccatcataatgatgtaagta 83913
>gb|AF411849.1|AF411849S1 Homo sapiens USH3 region, partial sequence Length = 198334 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 gagttcagaaaagagagggct 202 ||||||||||||||||||||| Sbjct: 92910 gagttcagaaaagagagggct 92930
>gb|DQ072165.1| Phaseolus coccineus mitochrondrial voltage-dependent anion-selective channel mRNA, complete cds; nuclear gene for mitochondrial product Length = 831 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 251 ctcttctcgatggccttggtgtccacctc 279 |||||||| |||||||||||||| ||||| Sbjct: 794 ctcttctcaatggccttggtgtctacctc 766
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 509 ttgttgttcaggttcagggat 529 ||||||||||||||||||||| Sbjct: 3828882 ttgttgttcaggttcagggat 3828902
>gb|AC110214.7| Mus musculus chromosome 8, clone RP24-485L5, complete sequence Length = 213387 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 ggacttctccacaaagtggt 482 |||||||||||||||||||| Sbjct: 55313 ggacttctccacaaagtggt 55294
>gb|BC070001.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:85606 IMAGE:6963958), complete cds Length = 2881 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 agatggtgcagagcgacttc 304 |||||||||||||||||||| Sbjct: 755 agatggtgcagagcgacttc 774
>gb|BT012680.1| Lycopersicon esculentum clone 113526R, mRNA sequence Length = 1095 Score = 40.1 bits (20), Expect = 9.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 389 tgctgagtgccgaaggtgaggctgttctcgttgctcgagaagctgtgggtcagctccgcc 448 |||||||| || | ||||| | ||||||| ||| | ||||||||||| ||| ||| ||| Sbjct: 705 tgctgagtacccacggtgatgatgttctcattggtagagaagctgtgattcacctcagcc 646 Query: 449 ccaacagc 456 |||||||| Sbjct: 645 ccaacagc 638
>gb|BC058318.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:65765 IMAGE:6801552), complete cds Length = 2899 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 agatggtgcagagcgacttc 304 |||||||||||||||||||| Sbjct: 724 agatggtgcagagcgacttc 743
>gb|BC044354.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:55267 IMAGE:3818319), complete cds Length = 2285 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 agatggtgcagagcgacttc 304 |||||||||||||||||||| Sbjct: 789 agatggtgcagagcgacttc 808
>ref|NM_131150.1| Danio rerio POU domain gene 12 (pou12), mRNA Length = 2189 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 agatggtgcagagcgacttc 304 |||||||||||||||||||| Sbjct: 709 agatggtgcagagcgacttc 728
>emb|CR405683.10| Zebrafish DNA sequence from clone CH211-157B13 in linkage group 2, complete sequence Length = 166899 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 aagatcttggttagtgtagc 554 |||||||||||||||||||| Sbjct: 7419 aagatcttggttagtgtagc 7438
>gb|AC102044.7| Mus musculus chromosome 9, clone RP23-303N8, complete sequence Length = 210347 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 caggaatgaaacacggcagttctt 90 ||||||||||||| |||||||||| Sbjct: 85919 caggaatgaaacaaggcagttctt 85942
>ref|XM_541501.2| PREDICTED: Canis familiaris similar to Sarcoplasmic reticulum histidine-rich calcium-binding protein precursor (LOC484386), mRNA Length = 2344 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 tcttctcgatggccttggtgtcca 275 ||||||| |||||||||||||||| Sbjct: 1083 tcttctccatggccttggtgtcca 1060
>emb|AL353707.14| Human DNA sequence from clone RP11-553J6 on chromosome 9 Contains a ribosomal protein S19 (RPS19) pseudogene, complete sequence Length = 125373 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 tatttggtgaaattcttggt 588 |||||||||||||||||||| Sbjct: 37058 tatttggtgaaattcttggt 37039
>emb|AL158209.23| Human DNA sequence from clone RP11-275N1 on chromosome 10 Contains a novel gene and a pseudogene similar to part of FLJ10581, complete sequence Length = 132327 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tgagagttcagaaaagagag 198 |||||||||||||||||||| Sbjct: 29185 tgagagttcagaaaagagag 29166
>emb|AL136231.12| Human DNA sequence from clone RP11-6J24 on chromosome 9p24.1-24.3 Contains the 3' end of the SLC1A1 gene for solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), the 5' end of a novel gene (FLJ10058), the gene for Hsp90-associating relative of Cdc37 (HARC) (FLJ20639), the 3' end of the AK3L1 gene for adenylate kinase 3 like 1 (AK3), a ribosomal protein S6 (RPS6) pseudogene and 3 CpG islands, complete sequence Length = 160012 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 tcttggttagtgtagctaaa 558 |||||||||||||||||||| Sbjct: 89513 tcttggttagtgtagctaaa 89494
>gb|AC161188.5| Mus musculus chromosome 8, clone RP23-227D17, complete sequence Length = 143672 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 ggacttctccacaaagtggt 482 |||||||||||||||||||| Sbjct: 93295 ggacttctccacaaagtggt 93276
>emb|Y07906.1|DRZP12POU D.rerio mRNA for zp-12 POU gene, splice variant (postsomitogenesis, 20-28 hpf) Length = 2994 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 agatggtgcagagcgacttc 304 |||||||||||||||||||| Sbjct: 751 agatggtgcagagcgacttc 770
>gb|BC065961.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:76858 IMAGE:6969114), complete cds Length = 2762 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 agatggtgcagagcgacttc 304 |||||||||||||||||||| Sbjct: 749 agatggtgcagagcgacttc 768
>emb|AL845158.5| Mouse DNA sequence from clone RP23-147E6 on chromosome 4 Contains a component of oligomeric golgi complex 1 (Cog5) pseudogene and part of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 198523 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 702 aatcatgtaagtactggagc 721 |||||||||||||||||||| Sbjct: 18216 aatcatgtaagtactggagc 18197
>emb|CR932798.1| Mus musculus chromosome 2, clone RPCI-21-15D06 strain 129/Sv, complete sequence Length = 165525 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 aaacacggcagttcttcaaatcta 98 ||||||||||| |||||||||||| Sbjct: 66822 aaacacggcagctcttcaaatcta 66799
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 gcttgatttcgccatcaagg 219 |||||||||||||||||||| Sbjct: 676426 gcttgatttcgccatcaagg 676445
>emb|BX842683.9| Zebrafish DNA sequence from clone DKEYP-118H3 in linkage group 9, complete sequence Length = 160823 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 agatggtgcagagcgacttc 304 |||||||||||||||||||| Sbjct: 89510 agatggtgcagagcgacttc 89529
>gb|AC117231.4| Mus musculus BAC clone RP23-394M5 from 8, complete sequence Length = 195936 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 tcttggttagtgtagctaaa 558 |||||||||||||||||||| Sbjct: 61849 tcttggttagtgtagctaaa 61868
>gb|U43898.2|DRU43898 Danio rerio alternatively spliced brn-1.1 protein variant (brn-1.1) mRNA, partial cds Length = 1326 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 agatggtgcagagcgacttc 304 |||||||||||||||||||| Sbjct: 143 agatggtgcagagcgacttc 162
>dbj|AP000484.5| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-14B22, complete sequences Length = 105149 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 tcttggttagtgtagctaaa 558 |||||||||||||||||||| Sbjct: 89288 tcttggttagtgtagctaaa 89307
>gb|AF039952.1|AF039952 Danio rerio type III POU domain protein (zp-12) mRNA, complete cds Length = 2189 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 agatggtgcagagcgacttc 304 |||||||||||||||||||| Sbjct: 709 agatggtgcagagcgacttc 728
>gb|U77736.1|DRU77736 Danio rerio class III POU domain protein (taichi) gene, complete cds Length = 1979 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 agatggtgcagagcgacttc 304 |||||||||||||||||||| Sbjct: 251 agatggtgcagagcgacttc 270
>gb|U79765.1|MCU79765 Mesembryanthemum crystallinum voltage-dependent anion-selective channel protein porin (VDAC) mRNA, complete cds Length = 1210 Score = 40.1 bits (20), Expect = 9.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 253 cttctcgatggccttggtgtccacctccgccgagatggtg 292 |||||| |||||||||||||| ||||| || |||| |||| Sbjct: 860 cttctcaatggccttggtgtcaacctcagcagagaaggtg 821
>emb|AL844538.9| Mouse DNA sequence from clone RP23-289K19 on chromosome 2, complete sequence Length = 180252 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 aaacacggcagttcttcaaatcta 98 ||||||||||| |||||||||||| Sbjct: 137881 aaacacggcagctcttcaaatcta 137904 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,216,762 Number of Sequences: 3902068 Number of extensions: 5216762 Number of successful extensions: 116887 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116494 Number of HSP's gapped (non-prelim): 382 length of query: 721 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 698 effective length of database: 17,143,297,704 effective search space: 11966021797392 effective search space used: 11966021797392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
