ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6p11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 1148 bits (579), Expect = 0.0 Identities = 600/608 (98%) Strand = Plus / Plus Query: 1 acatcccaaattcatcatttacattaggaatttcctgataaaaagtcttatgtgtattgg 60 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 196473 acatcccaaattcatcagttacattaggaatttcctgaaaaaaagtcttatgtgtattgg 196532 Query: 61 atccgctcttctgttagcatgaacacatgaatgagattcttcttattcttcctaaataga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196533 atccgctcttctgttagcatgaacacatgaatgagattcttcttattcttcctaaataga 196592 Query: 121 accccccaccctcacctttcttaggactatcaagccttctnntnttaggtctatggtaga 180 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 196593 accccccaccctcacctttcttaggactatcaagccttctcgaattaggtctatggtaga 196652 Query: 181 agctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtgac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196653 agctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtgac 196712 Query: 241 tatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgactt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196713 tatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgactt 196772 Query: 301 tacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196773 tacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagcg 196832 Query: 361 tgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagtaatcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196833 tgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagtaatcg 196892 Query: 421 ttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaattc 480 ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 196893 ttgttgttcattggattcctccggaattacttcgttaggattgaagaattgcagcaattc 196952 Query: 481 ttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactctt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196953 ttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactctt 197012 Query: 541 ccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatagat 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197013 ccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatagat 197072 Query: 601 tgagatct 608 |||||||| Sbjct: 197073 tgagatct 197080 Score = 109 bits (55), Expect = 1e-20 Identities = 81/91 (89%), Gaps = 9/91 (9%) Strand = Plus / Plus Query: 47 cttatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattc------- 99 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185370 cttatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattctattcct 185429 Query: 100 --ttcttattcttcctaaatagaacccccca 128 | ||||||||||||||||||||||||||| Sbjct: 185430 cttccttattcttcctaaatagaacccccca 185460 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 463 gaagaattgctgcaattcttc 483 ||||||||||||||||||||| Sbjct: 196955 gaagaattgctgcaattcttc 196935
>dbj|AB022059.1| Aegilops crassa mitochondrial gene for ORF48, ORF25, CLPP Length = 2392 Score = 1120 bits (565), Expect = 0.0 Identities = 600/610 (98%), Gaps = 2/610 (0%) Strand = Plus / Minus Query: 1 acatcccaaattcatcatttacattaggaatttcctgataaaaagtcttatgtgtattgg 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1615 acatcccaaattcatcatttacattaggaatttcctgaaaaaaagtcttatgtgtattgg 1556 Query: 61 atccgctcttctgttagcatgaacac-atgaat-gagattcttcttattcttcctaaata 118 |||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| Sbjct: 1555 atccgctcttctgttagcatgaacaccatgaattgacattcttcttattcttcctaaata 1496 Query: 119 gaaccccccaccctcacctttcttaggactatcaagccttctnntnttaggtctatggta 178 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1495 gaaccccccaccctcacctttcttaggactatcaagccttctcgaattaggtctatggta 1436 Query: 179 gaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtg 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1435 gaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtg 1376 Query: 239 actatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgac 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1375 actatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgac 1316 Query: 299 tttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacag 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1315 tttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacag 1256 Query: 359 cgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagtaat 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1255 cgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagtaat 1196 Query: 419 cgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaat 478 ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1195 cgttgttgttcattggattcctccggaattacttcgttaggattgaagaattgcagcaat 1136 Query: 479 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1135 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 1076 Query: 539 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1075 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 1016 Query: 599 attgagatct 608 |||||||||| Sbjct: 1015 attgagatct 1006 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 gaagaattgctgcaattcttc 483 ||||||||||||||||||||| Sbjct: 1131 gaagaattgctgcaattcttc 1151
>dbj|AB022060.1| Triticum aestivum mitochondrial gene for ORF25, complete cds Length = 2894 Score = 1112 bits (561), Expect = 0.0 Identities = 599/610 (98%), Gaps = 2/610 (0%) Strand = Plus / Minus Query: 1 acatcccaaattcatcatttacattaggaatttcctgataaaaagtcttatgtgtattgg 60 ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 2116 acatcccaaattcatcagttacattaggaatttcctgaaaaaaattcttatgtgtattgg 2057 Query: 61 atccgctcttctgttagcatgaacac-atgaat-gagattcttcttattcttcctaaata 118 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 2056 atccgctcttctgttagcatgaacaccatgaattgagattcttcttattcttcctaaata 1997 Query: 119 gaaccccccaccctcacctttcttaggactatcaagccttctnntnttaggtctatggta 178 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1996 gaaccccccaccctcacctttcttaggactatcaagccttctcgaattaggtctatggta 1937 Query: 179 gaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtg 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1936 gaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtg 1877 Query: 239 actatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgac 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1876 actatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgac 1817 Query: 299 tttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacag 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1816 tttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacag 1757 Query: 359 cgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagtaat 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1756 cgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagtaat 1697 Query: 419 cgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaat 478 ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1696 cgttgttgttcattggattcctccggaattacttcgttaggattgaagaattgcagcaat 1637 Query: 479 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1636 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 1577 Query: 539 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1576 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 1517 Query: 599 attgagatct 608 |||||||||| Sbjct: 1516 attgagatct 1507 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 gaagaattgctgcaattcttc 483 ||||||||||||||||||||| Sbjct: 1632 gaagaattgctgcaattcttc 1652
>emb|X54311.1|MITAORF25 Wheat mitochondrial ORF25 gene Length = 875 Score = 1049 bits (529), Expect = 0.0 Identities = 544/550 (98%) Strand = Plus / Minus Query: 59 ggatccgctcttctgttagcatgaacacatgaatgagattcttcttattcttcctaaata 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 875 ggatccgctcttctgttagcatgaacacatgaatgagattcttcttattcttcctaaata 816 Query: 119 gaaccccccaccctcacctttcttaggactatcaagccttctnntnttaggtctatggta 178 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 815 gaaccccccaccctcacctttcttaggactatcaagccttctcgaattaggtctatggta 756 Query: 179 gaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtg 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 gaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtg 696 Query: 239 actatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgac 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 695 actatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgac 636 Query: 299 tttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacag 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 tttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacag 576 Query: 359 cgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagtaat 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 575 cgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagtaat 516 Query: 419 cgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaat 478 ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 515 cgttgttgttcattggattcctccggaattacttcgttaggattgaagaattgcagcaat 456 Query: 479 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 396 Query: 539 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 336 Query: 599 attgagatct 608 |||||||||| Sbjct: 335 attgagatct 326 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 gaagaattgctgcaattcttc 483 ||||||||||||||||||||| Sbjct: 451 gaagaattgctgcaattcttc 471
>emb|X62094.1|TTMITORF T.timopheevi mitochondrial DNA for orf25 Length = 731 Score = 1049 bits (529), Expect = 0.0 Identities = 544/550 (98%) Strand = Plus / Minus Query: 59 ggatccgctcttctgttagcatgaacacatgaatgagattcttcttattcttcctaaata 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 731 ggatccgctcttctgttagcatgaacacatgaatgagattcttcttattcttcctaaata 672 Query: 119 gaaccccccaccctcacctttcttaggactatcaagccttctnntnttaggtctatggta 178 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 671 gaaccccccaccctcacctttcttaggactatcaagccttctcgaattaggtctatggta 612 Query: 179 gaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtg 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 611 gaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtg 552 Query: 239 actatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgac 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 actatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgac 492 Query: 299 tttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacag 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 tttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacag 432 Query: 359 cgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagtaat 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 cgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagtaat 372 Query: 419 cgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaat 478 ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 371 cgttgttgttcattggattcctccggaattacttcgttaggattgaagaattgcagcaat 312 Query: 479 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 252 Query: 539 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 192 Query: 599 attgagatct 608 |||||||||| Sbjct: 191 attgagatct 182 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 gaagaattgctgcaattcttc 483 ||||||||||||||||||||| Sbjct: 307 gaagaattgctgcaattcttc 327
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 819 bits (413), Expect = 0.0 Identities = 428/433 (98%) Strand = Plus / Plus Query: 176 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113539 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 113598 Query: 236 gtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgct 295 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113599 gtaactatatcgtcctgaagacggatgcgacgggaagaagtggcatttagaagtgttgct 113658 Query: 296 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113659 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 113718 Query: 356 cagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagt 415 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 113719 cagcgtgccgttggtaatgattctactacggcgctgcaaattcgcaagctgatcctaagt 113778 Query: 416 aatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgc 475 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 113779 aatcgttgttgttcattggattcccccggaattacttcgttaggattgaagaattgctgc 113838 Query: 476 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113839 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 113898 Query: 536 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113899 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 113958 Query: 596 tagattgagatct 608 ||||||||||||| Sbjct: 113959 tagattgagatct 113971 Score = 819 bits (413), Expect = 0.0 Identities = 428/433 (98%) Strand = Plus / Plus Query: 176 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18479 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 18538 Query: 236 gtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgct 295 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 18539 gtaactatatcgtcctgaagacggatgcgacgggaagaagtggcatttagaagtgttgct 18598 Query: 296 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18599 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 18658 Query: 356 cagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagt 415 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 18659 cagcgtgccgttggtaatgattctactacggcgctgcaaattcgcaagctgatcctaagt 18718 Query: 416 aatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgc 475 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 18719 aatcgttgttgttcattggattcccccggaattacttcgttaggattgaagaattgctgc 18778 Query: 476 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18779 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 18838 Query: 536 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18839 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 18898 Query: 596 tagattgagatct 608 ||||||||||||| Sbjct: 18899 tagattgagatct 18911 Score = 131 bits (66), Expect = 3e-27 Identities = 104/114 (91%), Gaps = 2/114 (1%) Strand = Plus / Minus Query: 14 atcatttacattaggaatttcctgataaaa-agtcttatgtgtattggatccgctcttct 72 |||||||||||| |||||||| || |||| ||||||||||||||||||||||||||||| Sbjct: 393573 atcatttacattcggaatttcaagagaaaagagtcttatgtgtattggatccgctcttct 393514 Query: 73 gttagcatgaacacatgaatgagattcttcttattcttcctaaatagaaccccc 126 ||||||||||||||||||||||||||| | || |||||| ||||||||||||| Sbjct: 393513 gttagcatgaacacatgaatgagattc-tattcctcttccaaaatagaaccccc 393461 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 133 cacctttcttaggactatcaagccttc 159 ||||||||||||||||||||||||||| Sbjct: 113466 cacctttcttaggactatcaagccttc 113492 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 133 cacctttcttaggactatcaagccttc 159 ||||||||||||||||||||||||||| Sbjct: 18406 cacctttcttaggactatcaagccttc 18432
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 819 bits (413), Expect = 0.0 Identities = 428/433 (98%) Strand = Plus / Plus Query: 176 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113060 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 113119 Query: 236 gtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgct 295 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113120 gtaactatatcgtcctgaagacggatgcgacgggaagaagtggcatttagaagtgttgct 113179 Query: 296 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113180 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 113239 Query: 356 cagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagt 415 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 113240 cagcgtgccgttggtaatgattctactacggcgctgcaaattcgcaagctgatcctaagt 113299 Query: 416 aatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgc 475 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 113300 aatcgttgttgttcattggattcccccggaattacttcgttaggattgaagaattgctgc 113359 Query: 476 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113360 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 113419 Query: 536 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113420 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 113479 Query: 596 tagattgagatct 608 ||||||||||||| Sbjct: 113480 tagattgagatct 113492 Score = 819 bits (413), Expect = 0.0 Identities = 428/433 (98%) Strand = Plus / Plus Query: 176 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18479 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 18538 Query: 236 gtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgct 295 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 18539 gtaactatatcgtcctgaagacggatgcgacgggaagaagtggcatttagaagtgttgct 18598 Query: 296 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18599 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 18658 Query: 356 cagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagt 415 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 18659 cagcgtgccgttggtaatgattctactacggcgctgcaaattcgcaagctgatcctaagt 18718 Query: 416 aatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgc 475 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 18719 aatcgttgttgttcattggattcccccggaattacttcgttaggattgaagaattgctgc 18778 Query: 476 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18779 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 18838 Query: 536 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18839 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 18898 Query: 596 tagattgagatct 608 ||||||||||||| Sbjct: 18899 tagattgagatct 18911 Score = 131 bits (66), Expect = 3e-27 Identities = 104/114 (91%), Gaps = 2/114 (1%) Strand = Plus / Minus Query: 14 atcatttacattaggaatttcctgataaaa-agtcttatgtgtattggatccgctcttct 72 |||||||||||| |||||||| || |||| ||||||||||||||||||||||||||||| Sbjct: 392749 atcatttacattcggaatttcaagagaaaagagtcttatgtgtattggatccgctcttct 392690 Query: 73 gttagcatgaacacatgaatgagattcttcttattcttcctaaatagaaccccc 126 ||||||||||||||||||||||||||| | || |||||| ||||||||||||| Sbjct: 392689 gttagcatgaacacatgaatgagattc-tattcctcttccaaaatagaaccccc 392637 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 133 cacctttcttaggactatcaagccttc 159 ||||||||||||||||||||||||||| Sbjct: 112987 cacctttcttaggactatcaagccttc 113013 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 133 cacctttcttaggactatcaagccttc 159 ||||||||||||||||||||||||||| Sbjct: 18406 cacctttcttaggactatcaagccttc 18432
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 819 bits (413), Expect = 0.0 Identities = 428/433 (98%) Strand = Plus / Plus Query: 176 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113060 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 113119 Query: 236 gtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgct 295 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113120 gtaactatatcgtcctgaagacggatgcgacgggaagaagtggcatttagaagtgttgct 113179 Query: 296 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113180 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 113239 Query: 356 cagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagt 415 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 113240 cagcgtgccgttggtaatgattctactacggcgctgcaaattcgcaagctgatcctaagt 113299 Query: 416 aatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgc 475 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 113300 aatcgttgttgttcattggattcccccggaattacttcgttaggattgaagaattgctgc 113359 Query: 476 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113360 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 113419 Query: 536 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113420 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 113479 Query: 596 tagattgagatct 608 ||||||||||||| Sbjct: 113480 tagattgagatct 113492 Score = 819 bits (413), Expect = 0.0 Identities = 428/433 (98%) Strand = Plus / Plus Query: 176 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18479 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 18538 Query: 236 gtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgct 295 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 18539 gtaactatatcgtcctgaagacggatgcgacgggaagaagtggcatttagaagtgttgct 18598 Query: 296 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18599 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 18658 Query: 356 cagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagt 415 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 18659 cagcgtgccgttggtaatgattctactacggcgctgcaaattcgcaagctgatcctaagt 18718 Query: 416 aatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgc 475 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 18719 aatcgttgttgttcattggattcccccggaattacttcgttaggattgaagaattgctgc 18778 Query: 476 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18779 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 18838 Query: 536 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18839 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 18898 Query: 596 tagattgagatct 608 ||||||||||||| Sbjct: 18899 tagattgagatct 18911 Score = 131 bits (66), Expect = 3e-27 Identities = 104/114 (91%), Gaps = 2/114 (1%) Strand = Plus / Minus Query: 14 atcatttacattaggaatttcctgataaaa-agtcttatgtgtattggatccgctcttct 72 |||||||||||| |||||||| || |||| ||||||||||||||||||||||||||||| Sbjct: 392745 atcatttacattcggaatttcaagagaaaagagtcttatgtgtattggatccgctcttct 392686 Query: 73 gttagcatgaacacatgaatgagattcttcttattcttcctaaatagaaccccc 126 ||||||||||||||||||||||||||| | || |||||| ||||||||||||| Sbjct: 392685 gttagcatgaacacatgaatgagattc-tattcctcttccaaaatagaaccccc 392633 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 133 cacctttcttaggactatcaagccttc 159 ||||||||||||||||||||||||||| Sbjct: 112987 cacctttcttaggactatcaagccttc 113013 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 133 cacctttcttaggactatcaagccttc 159 ||||||||||||||||||||||||||| Sbjct: 18406 cacctttcttaggactatcaagccttc 18432
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 819 bits (413), Expect = 0.0 Identities = 428/433 (98%) Strand = Plus / Plus Query: 176 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113005 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 113064 Query: 236 gtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgct 295 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113065 gtaactatatcgtcctgaagacggatgcgacgggaagaagtggcatttagaagtgttgct 113124 Query: 296 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113125 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 113184 Query: 356 cagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagt 415 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 113185 cagcgtgccgttggtaatgattctactacggcgctgcaaattcgcaagctgatcctaagt 113244 Query: 416 aatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgc 475 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 113245 aatcgttgttgttcattggattcccccggaattacttcgttaggattgaagaattgctgc 113304 Query: 476 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113305 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 113364 Query: 536 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113365 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 113424 Query: 596 tagattgagatct 608 ||||||||||||| Sbjct: 113425 tagattgagatct 113437 Score = 819 bits (413), Expect = 0.0 Identities = 428/433 (98%) Strand = Plus / Plus Query: 176 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18478 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 18537 Query: 236 gtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgct 295 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 18538 gtaactatatcgtcctgaagacggatgcgacgggaagaagtggcatttagaagtgttgct 18597 Query: 296 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18598 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 18657 Query: 356 cagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagt 415 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 18658 cagcgtgccgttggtaatgattctactacggcgctgcaaattcgcaagctgatcctaagt 18717 Query: 416 aatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgc 475 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 18718 aatcgttgttgttcattggattcccccggaattacttcgttaggattgaagaattgctgc 18777 Query: 476 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18778 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 18837 Query: 536 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18838 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 18897 Query: 596 tagattgagatct 608 ||||||||||||| Sbjct: 18898 tagattgagatct 18910 Score = 131 bits (66), Expect = 3e-27 Identities = 104/114 (91%), Gaps = 2/114 (1%) Strand = Plus / Minus Query: 14 atcatttacattaggaatttcctgataaaa-agtcttatgtgtattggatccgctcttct 72 |||||||||||| |||||||| || |||| ||||||||||||||||||||||||||||| Sbjct: 392607 atcatttacattcggaatttcaagagaaaagagtcttatgtgtattggatccgctcttct 392548 Query: 73 gttagcatgaacacatgaatgagattcttcttattcttcctaaatagaaccccc 126 ||||||||||||||||||||||||||| | || |||||| ||||||||||||| Sbjct: 392547 gttagcatgaacacatgaatgagattc-tattcctcttccaaaatagaaccccc 392495 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 133 cacctttcttaggactatcaagccttc 159 ||||||||||||||||||||||||||| Sbjct: 112932 cacctttcttaggactatcaagccttc 112958 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 133 cacctttcttaggactatcaagccttc 159 ||||||||||||||||||||||||||| Sbjct: 18405 cacctttcttaggactatcaagccttc 18431
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 787 bits (397), Expect = 0.0 Identities = 424/433 (97%) Strand = Plus / Plus Query: 176 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8539772 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 8539831 Query: 236 gtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgct 295 || ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 8539832 gtaactatatcgtcttgaagacggatgcgacgggaagaagtggcatttagaagtgttgct 8539891 Query: 296 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8539892 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 8539951 Query: 356 cagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagt 415 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 8539952 cagcgtgccgttggtaatgattctactacggcgctgcaaattcgcaagctgatcctaagt 8540011 Query: 416 aatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgc 475 |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 8540012 aatcgttgttgttcattggattcccccggaattacttcgttaggattgaacaattgctgc 8540071 Query: 476 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 535 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 8540072 aattcttcctgaatagactcaattctcccgtcgagagtttctttgaaagtcttacctaaa 8540131 Query: 536 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 595 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 8540132 ctcttccgactgaatatgagaaggcctataaaacaacgagctactatcatttcttcatta 8540191 Query: 596 tagattgagatct 608 ||||||||||||| Sbjct: 8540192 tagattgagatct 8540204 Score = 121 bits (61), Expect = 3e-24 Identities = 61/61 (100%) Strand = Plus / Minus Query: 176 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13459890 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 13459831 Query: 236 g 236 | Sbjct: 13459830 g 13459830 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 172 tatggtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaa 231 ||||||| |||||||||||||| |||| |||||||||||||||||||||||||||| ||| Sbjct: 9910075 tatggtataagctttgaacgtaaacccagatacaaatctttcactcactgaaaagttaaa 9910134 Query: 232 ac 233 || Sbjct: 9910135 ac 9910136 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 133 cacctttcttaggactatcaagccttc 159 ||||||||||||||||||||||||||| Sbjct: 8539699 cacctttcttaggactatcaagccttc 8539725
>gb|M74241.1|RICMTCOX3A Oryza sativa mitochondrial orf25 and cytochrome oxidase subunit III genes, complete cds Length = 2860 Score = 787 bits (397), Expect = 0.0 Identities = 424/433 (97%) Strand = Plus / Minus Query: 176 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1276 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 1217 Query: 236 gtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgct 295 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1216 gtaactatatcgtcctgaagacggatgcgacgggaagaagtggcatttagaagtgttgct 1157 Query: 296 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1156 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 1097 Query: 356 cagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagt 415 ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1096 caggctgccgttggtaatgattctactacggcgctgcaaattcgcaagctgatcctaagt 1037 Query: 416 aatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgc 475 |||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 1036 aatcgttgttgttcattggattcccccggaattacttgcttaggattgaagaattgctgc 977 Query: 476 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 976 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 917 Query: 536 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 916 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 857 Query: 596 tagattgagatct 608 ||||||||||||| Sbjct: 856 tagattgagatct 844 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 133 cacctttcttaggactatcaagccttc 159 ||||||||||||||||||||||||||| Sbjct: 1349 cacctttcttaggactatcaagccttc 1323
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 787 bits (397), Expect = 0.0 Identities = 424/433 (97%) Strand = Plus / Plus Query: 176 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8539655 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 8539714 Query: 236 gtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgct 295 || ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 8539715 gtaactatatcgtcttgaagacggatgcgacgggaagaagtggcatttagaagtgttgct 8539774 Query: 296 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8539775 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 8539834 Query: 356 cagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagt 415 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 8539835 cagcgtgccgttggtaatgattctactacggcgctgcaaattcgcaagctgatcctaagt 8539894 Query: 416 aatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgc 475 |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 8539895 aatcgttgttgttcattggattcccccggaattacttcgttaggattgaacaattgctgc 8539954 Query: 476 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 535 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 8539955 aattcttcctgaatagactcaattctcccgtcgagagtttctttgaaagtcttacctaaa 8540014 Query: 536 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 595 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 8540015 ctcttccgactgaatatgagaaggcctataaaacaacgagctactatcatttcttcatta 8540074 Query: 596 tagattgagatct 608 ||||||||||||| Sbjct: 8540075 tagattgagatct 8540087 Score = 121 bits (61), Expect = 3e-24 Identities = 61/61 (100%) Strand = Plus / Minus Query: 176 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13414164 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 13414105 Query: 236 g 236 | Sbjct: 13414104 g 13414104 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 172 tatggtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaa 231 ||||||| |||||||||||||| |||| |||||||||||||||||||||||||||| ||| Sbjct: 9909960 tatggtataagctttgaacgtaaacccagatacaaatctttcactcactgaaaagttaaa 9910019 Query: 232 ac 233 || Sbjct: 9910020 ac 9910021 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 133 cacctttcttaggactatcaagccttc 159 ||||||||||||||||||||||||||| Sbjct: 8539582 cacctttcttaggactatcaagccttc 8539608
>emb|AL844877.2|CNS08CB0 Oryza sativa chromosome 12, . BAC OSJNBb0034B07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125000 Score = 787 bits (397), Expect = 0.0 Identities = 424/433 (97%) Strand = Plus / Plus Query: 176 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2519 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 2578 Query: 236 gtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgct 295 || ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2579 gtaactatatcgtcttgaagacggatgcgacgggaagaagtggcatttagaagtgttgct 2638 Query: 296 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2639 gactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgca 2698 Query: 356 cagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagt 415 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2699 cagcgtgccgttggtaatgattctactacggcgctgcaaattcgcaagctgatcctaagt 2758 Query: 416 aatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgc 475 |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 2759 aatcgttgttgttcattggattcccccggaattacttcgttaggattgaacaattgctgc 2818 Query: 476 aattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaa 535 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2819 aattcttcctgaatagactcaattctcccgtcgagagtttctttgaaagtcttacctaaa 2878 Query: 536 ctcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatta 595 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2879 ctcttccgactgaatatgagaaggcctataaaacaacgagctactatcatttcttcatta 2938 Query: 596 tagattgagatct 608 ||||||||||||| Sbjct: 2939 tagattgagatct 2951 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 133 cacctttcttaggactatcaagccttc 159 ||||||||||||||||||||||||||| Sbjct: 2446 cacctttcttaggactatcaagccttc 2472
>gb|U22069.1|SBU22069 Sorghum bicolor URF209 mRNA, mitochondrial gene encoding mitochondrial protein, complete cds Length = 1209 Score = 735 bits (371), Expect = 0.0 Identities = 422/439 (96%) Strand = Plus / Minus Query: 170 tctatggtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtga 229 |||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 977 tctacggtagaagcttctaccgtagacccggatacaaatctttcactcactgaaaagtga 918 Query: 230 aaacctgtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagt 289 ||||| |||| |||||| ||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 917 aaaccagtgattatatcttcctgaagacggatgcgacgggaagaaatggcatttagaagt 858 Query: 290 gttgctgactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcactta 349 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 857 gttgctaactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcactta 798 Query: 350 ggcgcacagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatc 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 797 ggcgcacagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgacc 738 Query: 410 ctaagtaatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaat 469 |||||||| ||||||| |||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 737 ctaagtaaccgttgttgttcattggattcctccagaatgacttcgttaggattgaagaat 678 Query: 470 tgctgcaattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtctta 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 tgctgcaattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtctta 618 Query: 530 cctaaactcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttct 589 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 617 cctaaactcttccgactgaatatgagaaagcctataaaacaacaagctactatcatttct 558 Query: 590 tcattatagattgagatct 608 |||||||||||| |||||| Sbjct: 557 tcattatagattaagatct 539 Score = 149 bits (75), Expect = 1e-32 Identities = 121/137 (88%), Gaps = 9/137 (6%) Strand = Plus / Minus Query: 49 tatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattct-----tct 103 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1140 tatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattctattcctct 1081 Query: 104 ----tattcttcctaaatagaaccccccaccctcacctttcttaggactatcaagccttc 159 |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1080 tccttattcttcaaaaatagaaccccccaccctcacctttctgaggactatcaagccttc 1021 Query: 160 tnntnttaggtctatgg 176 | |||||||||||| Sbjct: 1020 tcgaattaggtctatgg 1004
>gb|AY831970.1| Agave attenuata ATPase subunit 4 (atp4) gene, partial cds; mitochondrial Length = 491 Score = 698 bits (352), Expect = 0.0 Identities = 412/432 (95%) Strand = Plus / Minus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| |||||| |||||| |||||||||||||||||||| ||||||||||||| Sbjct: 466 tagaagctttcaacgtacacccggggacaaatctttcactcactgagaagtgaaaacctg 407 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctg 296 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 406 tgactatatcgtcctgaagacggatgcgacgggaagaagtggcatttagaagtgttgctg 347 Query: 297 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 356 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 346 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggtgcac 287 Query: 357 agcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagta 416 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 286 tgcgtgccgttggtaatgattctactacggtgccgcaaattcgcaagctggtcctaagta 227 Query: 417 atcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgca 476 ||||||||| ||||||||||||| ||||| ||||||||||||||| |||||||||| Sbjct: 226 atcgttgttgttcattggattccggaggaatgacttcgttaggattggagaattgctgtg 167 Query: 477 attcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaac 536 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 166 attcttcctgaatagactcgattctcccgtcgagagtgactttgaaagtcttacctaaac 107 Query: 537 tcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattat 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 tcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattat 47 Query: 597 agattgagatct 608 |||||||||||| Sbjct: 46 agattgagatct 35
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 682 bits (344), Expect = 0.0 Identities = 408/430 (94%), Gaps = 12/430 (2%) Strand = Plus / Plus Query: 191 gtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 250 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138701 gtagacccggatactaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 138760 Query: 251 tgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgactttacatttagg 310 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 138761 tgaagacggatgcgacgggaagaagtggcatttagaagtgttgctgacttgacatttagg 138820 Query: 311 tttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccgttggt 370 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 138821 tttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccgctggt 138880 Query: 371 aatgattctac------tacggtgctgcaaattcgcaagctgatcc------taagtaat 418 ||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 138881 aatgattctactacttttacggtgctgcaaattcgcaagctgatccgtagattaagtaat 138940 Query: 419 cgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaat 478 ||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 138941 cgttgttgttcattggattcctccagaatgacttcgttaggattgaagaattgctgcaat 139000 Query: 479 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139001 gattcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 139060 Query: 539 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 598 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139061 ttccgacttaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 139120 Query: 599 attgagatct 608 |||||||||| Sbjct: 139121 attgagatct 139130 Score = 103 bits (52), Expect = 7e-19 Identities = 52/52 (100%) Strand = Plus / Minus Query: 49 tatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattct 100 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345634 tatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattct 345583 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 382 tacggtgctgcaaattcgcaagctgatcctaa 413 |||||||||||||||||||||||||||||||| Sbjct: 434322 tacggtgctgcaaattcgcaagctgatcctaa 434291 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 121 accccccaccctcacctttcttaggactatcaagccttct 160 ||||||||||||||||||||| |||||||| ||||||||| Sbjct: 138589 accccccaccctcacctttctgaggactataaagccttct 138628 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 40 aaaaagtcttatgtgtattggatccg 65 |||||||||||||||||||||||||| Sbjct: 527696 aaaaagtcttatgtgtattggatccg 527671 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 40 aaaaagtcttatgtgtattggatccg 65 |||||||||||||||||||||||||| Sbjct: 458759 aaaaagtcttatgtgtattggatccg 458734 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 ctcccgtcgagagtttcttt 519 |||||||||||||||||||| Sbjct: 425991 ctcccgtcgagagtttcttt 426010 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 gaagtggcatttagaagtgttgct 295 ||||||||||| |||||||||||| Sbjct: 356617 gaagtggcattgagaagtgttgct 356594
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 682 bits (344), Expect = 0.0 Identities = 408/430 (94%), Gaps = 12/430 (2%) Strand = Plus / Plus Query: 191 gtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 250 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479689 gtagacccggatactaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 479748 Query: 251 tgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgactttacatttagg 310 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 479749 tgaagacggatgcgacgggaagaagtggcatttagaagtgttgctgacttgacatttagg 479808 Query: 311 tttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccgttggt 370 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 479809 tttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccgctggt 479868 Query: 371 aatgattctac------tacggtgctgcaaattcgcaagctgatcc------taagtaat 418 ||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 479869 aatgattctactacttttacggtgctgcaaattcgcaagctgatccgtagattaagtaat 479928 Query: 419 cgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaat 478 ||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 479929 cgttgttgttcattggattcctccagaatgacttcgttaggattgaagaattgctgcaat 479988 Query: 479 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479989 gattcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 480048 Query: 539 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 598 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480049 ttccgacttaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 480108 Query: 599 attgagatct 608 |||||||||| Sbjct: 480109 attgagatct 480118 Score = 103 bits (52), Expect = 7e-19 Identities = 52/52 (100%) Strand = Plus / Plus Query: 49 tatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattct 100 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210075 tatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattct 210126 Score = 103 bits (52), Expect = 7e-19 Identities = 52/52 (100%) Strand = Plus / Plus Query: 49 tatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattct 100 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81383 tatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattct 81434 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 121 accccccaccctcacctttcttaggactatcaagccttct 160 ||||||||||||||||||||| |||||||| ||||||||| Sbjct: 479577 accccccaccctcacctttctgaggactataaagccttct 479616 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 382 tacggtgctgcaaattcgcaagctgatcctaa 413 |||||||||||||||||||||||||||||||| Sbjct: 250101 tacggtgctgcaaattcgcaagctgatcctaa 250132 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 382 tacggtgctgcaaattcgcaagctgatcctaa 413 |||||||||||||||||||||||||||||||| Sbjct: 121409 tacggtgctgcaaattcgcaagctgatcctaa 121440 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 40 aaaaagtcttatgtgtattggatccg 65 |||||||||||||||||||||||||| Sbjct: 647478 aaaaagtcttatgtgtattggatccg 647453 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 ctcccgtcgagagtttcttt 519 |||||||||||||||||||| Sbjct: 258432 ctcccgtcgagagtttcttt 258413 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 gaagtggcatttagaagtgttgct 295 ||||||||||| |||||||||||| Sbjct: 199092 gaagtggcattgagaagtgttgct 199115 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 ctcccgtcgagagtttcttt 519 |||||||||||||||||||| Sbjct: 129740 ctcccgtcgagagtttcttt 129721
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 682 bits (344), Expect = 0.0 Identities = 408/430 (94%), Gaps = 12/430 (2%) Strand = Plus / Plus Query: 191 gtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 250 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493334 gtagacccggatactaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 493393 Query: 251 tgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgactttacatttagg 310 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 493394 tgaagacggatgcgacgggaagaagtggcatttagaagtgttgctgacttgacatttagg 493453 Query: 311 tttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccgttggt 370 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 493454 tttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccgctggt 493513 Query: 371 aatgattctac------tacggtgctgcaaattcgcaagctgatcc------taagtaat 418 ||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 493514 aatgattctactacttttacggtgctgcaaattcgcaagctgatccgtagattaagtaat 493573 Query: 419 cgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaat 478 ||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 493574 cgttgttgttcattggattcctccagaatgacttcgttaggattgaagaattgctgcaat 493633 Query: 479 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493634 gattcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 493693 Query: 539 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 598 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493694 ttccgacttaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 493753 Query: 599 attgagatct 608 |||||||||| Sbjct: 493754 attgagatct 493763 Score = 103 bits (52), Expect = 7e-19 Identities = 52/52 (100%) Strand = Plus / Plus Query: 49 tatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattct 100 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544080 tatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattct 544131 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 121 accccccaccctcacctttcttaggactatcaagccttct 160 |||||||||||||||||||||||||||||| ||||||||| Sbjct: 493222 accccccaccctcacctttcttaggactataaagccttct 493261 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 382 tacggtgctgcaaattcgcaagctgatcctaa 413 |||||||||||||||||||||||||||||||| Sbjct: 327020 tacggtgctgcaaattcgcaagctgatcctaa 326989 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 40 aaaaagtcttatgtgtattggatccg 65 |||||||||||||||||||||||||| Sbjct: 559890 aaaaagtcttatgtgtattggatccg 559865 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 gaagtggcatttagaagtgttgct 295 ||||||||||| |||||||||||| Sbjct: 568483 gaagtggcattgagaagtgttgct 568460 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 ctcccgtcgagagtttcttt 519 |||||||||||||||||||| Sbjct: 318673 ctcccgtcgagagtttcttt 318692 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 gaagtggcatttagaagtgttgct 295 ||||||||||| |||||||||||| Sbjct: 249257 gaagtggcattgagaagtgttgct 249234 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 gaagtggcatttagaagtgttgct 295 ||||||||||| |||||||||||| Sbjct: 1071 gaagtggcattgagaagtgttgct 1094
>emb|X06667.1|MIZMOR25 Maize mitochondrial DNA for open reading frame 25 Length = 846 Score = 682 bits (344), Expect = 0.0 Identities = 408/430 (94%), Gaps = 12/430 (2%) Strand = Plus / Minus Query: 191 gtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 250 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 gtagacccggatactaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 544 Query: 251 tgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgactttacatttagg 310 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 543 tgaagacggatgcgacgggaagaagtggcatttagaagtgttgctgacttgacatttagg 484 Query: 311 tttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccgttggt 370 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 483 tttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccgctggt 424 Query: 371 aatgattctac------tacggtgctgcaaattcgcaagctgatcc------taagtaat 418 ||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 423 aatgattctactacttttacggtgctgcaaattcgcaagctgatccgtagattaagtaat 364 Query: 419 cgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaat 478 ||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 363 cgttgttgttcattggattcctccagaatgacttcgttaggattgaagaattgctgcaat 304 Query: 479 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 gattcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 244 Query: 539 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 598 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 ttccgacttaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 184 Query: 599 attgagatct 608 |||||||||| Sbjct: 183 attgagatct 174 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 121 accccccaccctcacctttcttaggactatcaagccttct 160 ||||||||||||||||||||| |||||||| ||||||||| Sbjct: 715 accccccaccctcacctttctgaggactataaagccttct 676
>gb|AY831969.1| Philodendron oxycardium ATPase subunit 4 (atp4) gene, partial cds; mitochondrial Length = 459 Score = 682 bits (344), Expect = 0.0 Identities = 410/432 (94%) Strand = Plus / Minus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| |||||| |||||| |||||||||||||||||||| ||||||||||||| Sbjct: 440 tagaagctttcaacgtacacccggggacaaatctttcactcactgagaagtgaaaacctg 381 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctg 296 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 380 tgactatatcgtcctgaagacggatgcgacgggaagaagtggcatttagaagtgttgctg 321 Query: 297 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 356 | || |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 320 atttaacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgtac 261 Query: 357 agcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagta 416 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 260 agcgtgccgttggtaatgattctactacggtgccacaaattcgcaagctgatcctaagta 201 Query: 417 atcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgca 476 ||||||||| ||||||||||||| |||| ||||||||||||||| ||||||||||| Sbjct: 200 atcgttgttgttcattggattccggaggaacgacttcgttaggattggagaattgctgcg 141 Query: 477 attcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaac 536 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 140 attcttcctgaatagactccattctcccgtcgagagtgactttgaaagtcttacctaaac 81 Query: 537 tcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattat 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 tcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattat 21 Query: 597 agattgagatct 608 |||||||||||| Sbjct: 20 agattgagatct 9
>gb|AY831971.1| Eichhornia crassipes ATPase subunit 4 (atp4) gene, partial cds; mitochondrial Length = 524 Score = 672 bits (339), Expect = 0.0 Identities = 434/468 (92%) Strand = Plus / Minus Query: 141 ttaggactatcaagccttctnntnttaggtctatggtagaagctttgaacgtagacccgg 200 |||||||||||||||| ||| |||| |||| | ||||||||| || ||||| |||| Sbjct: 516 ttaggactatcaagccctctcgaattagttctacgagagaagctttcaaggtagatccgg 457 Query: 201 atacaaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcctgaagacgga 260 |||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| Sbjct: 456 ggacaaatctttcactcactgagaagtgaaaacctgtgantagatcgtcctgaagacgga 397 Query: 261 tgcggcgggaagaagtggcatttagaagtgttgctgactttacatttaggtttcggcata 320 |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 396 tgcgacgggaagaagtggcatttagaagtgtagctgactttacatttaggtttcggcata 337 Query: 321 acaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccgttggtaatgattcta 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 336 acaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccgttggtaatgattcta 277 Query: 381 ctacggtgctgcaaattcgcaagctgatcctaagtaatcgttgttcttcattggattcct 440 ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 276 ctacggtgccgcaaattcgcaagctgatcctaagtaatcgttgttgttcattggattccg 217 Query: 441 ccggaattacttcgttaggattgaagaattgctgcaattcttcctgaatagactcgattc 500 |||| ||||||||||||||| ||||||||||| |||||||||||||||||| ||||| Sbjct: 216 gaggaacgacttcgttaggattggagaattgctgcnattcttcctgaatagactngattc 157 Query: 501 tcccgtcgagagtttctttgaaagtcttacctaaactcttccgactgaatatgagaaagc 560 ||||||||||||| |||||||||| ||||||||||||||||||||||| |||| ||||| Sbjct: 156 tcccgtcgagagtgactttgaaagtattacctaaactcttccgactgaanatgacaaagc 97 Query: 561 ctataaaacaacgagctactatcatttcttcattatagattgagatct 608 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctataaaacaacgagctactatcatttcttcattatagattgagatct 49
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 666 bits (336), Expect = 0.0 Identities = 406/430 (94%), Gaps = 12/430 (2%) Strand = Plus / Minus Query: 191 gtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446654 gtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 446595 Query: 251 tgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgactttacatttagg 310 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 446594 tgaagacggatgcgacgggaagaagtggcatttagaagtgttgctgacttgacatttagg 446535 Query: 311 tttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccgttggt 370 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 446534 tttcggcataacaaagcttgcactgtcttttcgcacttaggcgcgcagcgtgccgctggt 446475 Query: 371 aatgattctac------tacggtgctgcaaattcgcaagctgatc------ctaagtaat 418 ||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 446474 aatgattctactacttttacggtgctgcaaattcgcaagctgatctgtagattaagtaat 446415 Query: 419 cgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaat 478 ||||||| |||||||||||||||| |||| ||||||||||||||| |||||||||||||| Sbjct: 446414 cgttgttgttcattggattcctccagaatgacttcgttaggattgcagaattgctgcaat 446355 Query: 479 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446354 gattcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 446295 Query: 539 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 598 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446294 ttccgacttaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 446235 Query: 599 attgagatct 608 |||||||||| Sbjct: 446234 attgagatct 446225 Score = 103 bits (52), Expect = 7e-19 Identities = 52/52 (100%) Strand = Plus / Plus Query: 49 tatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattct 100 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466042 tatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattct 466093 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 121 accccccaccctcacctttcttaggactatcaagccttct 160 |||||||||||||||||||||||||||||| ||||||||| Sbjct: 446766 accccccaccctcacctttcttaggactataaagccttct 446727 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 382 tacggtgctgcaaattcgcaagctgatcctaa 413 |||||||||||||||||||||||||||||||| Sbjct: 299833 tacggtgctgcaaattcgcaagctgatcctaa 299802 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 40 aaaaagtcttatgtgtattggatccg 65 |||||||||||||||||||||||||| Sbjct: 58281 aaaaagtcttatgtgtattggatccg 58256 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 gaagtggcatttagaagtgttgct 295 ||||||||||| |||||||||||| Sbjct: 455054 gaagtggcattgagaagtgttgct 455077 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 ctcccgtcgagagtttcttt 519 |||||||||||||||||||| Sbjct: 291497 ctcccgtcgagagtttcttt 291516
>gb|AY007816.1| Daucus carota cytochrome b (cob) gene, cob-N allele, complete cds; and ORF25 (orf25) gene, orf25-N allele, complete cds; mitochondrial genes for mitochondrial products Length = 2573 Score = 666 bits (336), Expect = 0.0 Identities = 408/432 (94%) Strand = Plus / Minus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 2260 tagaagctttcaacgtagacccggggacaaatctttcactcactgagaagtgaaaacctg 2201 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctg 296 |||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2200 tgactagatcgtcctgaagacggatgcgacgggaagaagtggcatttggaagtgttgctg 2141 Query: 297 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 356 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2140 acttaacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 2081 Query: 357 agcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagta 416 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2080 agcgtgccattggtaatgattctactacggtgccacaaattcgcaagctgatcctaagta 2021 Query: 417 atcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgca 476 ||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||| Sbjct: 2020 atcgttgttgttcattggattccggaggaactacttcgttaggattggggaattgctgcg 1961 Query: 477 attcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaac 536 ||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||| Sbjct: 1960 attcttcctgaatagcctggattctcccgtcgagagtcactttgaaagtcttacctaaac 1901 Query: 537 tcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattat 596 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1900 tcttccgactgaatatgataaagcctataaaacaacgagctactatcatttcttcattat 1841 Query: 597 agattgagatct 608 |||||||||||| Sbjct: 1840 agattgagatct 1829 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 54 gtattggatccgctcttctgttagcatgaaca 85 ||||||||||||||||||||||||||| |||| Sbjct: 2387 gtattggatccgctcttctgttagcataaaca 2356
>gb|AY831973.1| Liriodendron tulipifera ATPase subunit 4 (atp4) gene, partial cds; mitochondrial Length = 499 Score = 666 bits (336), Expect = 0.0 Identities = 408/432 (94%) Strand = Plus / Minus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| |||||| |||||| | |||||||||||||||||| ||||||||||||| Sbjct: 468 tagaagctttcaacgtacacccggggaaaaatctttcactcactgagaagtgaaaacctg 409 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctg 296 | |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 408 ttactatatcgtcctgaagacggatgcgacgggaagaagtggcatttggaagtgttgctg 349 Query: 297 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 289 Query: 357 agcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagta 416 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 288 agcgtgccgttggtaatgattctactacggtgccacaaattcgcaagctgatcctaagta 229 Query: 417 atcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgca 476 ||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||| Sbjct: 228 atcgttgttgttcattggattccggaggaactacttcgttaggattggggaattgctgcg 169 Query: 477 attcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaac 536 ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 168 attcttcctgaatagcctcgattctcccgtcgagagtcactttgaaagtcttacctaaac 109 Query: 537 tcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattat 596 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 108 tcttccgactgaatatgataaagcctataaaacgacgagctactatcatttcttcattat 49 Query: 597 agattgagatct 608 |||||||||||| Sbjct: 48 agattgagatct 37
>gb|M12582.1|MZEMTTURF Maize (cms-T) mitochondrial TURF 2H3 sequence containing 2 ORFs Length = 3547 Score = 658 bits (332), Expect = 0.0 Identities = 405/430 (94%), Gaps = 12/430 (2%) Strand = Plus / Minus Query: 191 gtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2151 gtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 2092 Query: 251 tgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgactttacatttagg 310 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2091 tgaagacggatgcgacgggaagaagtggcatttagaagtgttgctgacttgacatttagg 2032 Query: 311 tttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccgttggt 370 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 2031 tttcggcataacaaagcttgcactgtcttttcgcacttaggcgcgcagcgtgccgctggt 1972 Query: 371 aatgattctac------tacggtgctgcaaattcgcaagctgatc------ctaagtaat 418 ||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 1971 aatgattctactacttttacggtgctgcaaattcgcaagctgatctgtagattaagtaat 1912 Query: 419 cgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaat 478 ||||||| |||| ||||||||||| |||| ||||||||||||||| |||||||||||||| Sbjct: 1911 cgttgttgttcaatggattcctccagaatgacttcgttaggattgcagaattgctgcaat 1852 Query: 479 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1851 gattcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 1792 Query: 539 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 598 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1791 ttccgacttaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 1732 Query: 599 attgagatct 608 |||||||||| Sbjct: 1731 attgagatct 1722 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 121 accccccaccctcacctttcttaggactatcaagccttct 160 |||||||||||||||||||||||||||||| ||||||||| Sbjct: 2263 accccccaccctcacctttcttaggactataaagccttct 2224
>gb|AY831979.1| Amborella trichopoda ATPase subunit 4 (atp4) gene, partial cds; mitochondrial Length = 481 Score = 650 bits (328), Expect = 0.0 Identities = 406/432 (93%) Strand = Plus / Minus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 459 tagaagctttcaacgtagacccggggacaaatctttcactcactgataagtgaaaacctg 400 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctg 296 |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 399 tgactatatcgtcctgaagacggatgcgacgggaagaagtggcatttagaagtcttgctg 340 Query: 297 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 356 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 gcttaacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 280 Query: 357 agcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagta 416 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 279 agcgtgccgttggtaatgattctactacggtgccacaaattcgcaagctgatcctaagta 220 Query: 417 atcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgca 476 ||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||| Sbjct: 219 atcgttgttgttcattggattccggaggaactacttcgttaggattggggaattgctgcg 160 Query: 477 attcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaac 536 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 159 attcttcctgaatagcctcgattctcccgtcgagagtcactttgaaagtcttacccgaac 100 Query: 537 tcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattat 596 |||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 99 tcttccgactgaatatgataaagccaataaaacgacgagctactatcatttcttcattat 40 Query: 597 agattgagatct 608 |||||||||||| Sbjct: 39 agattgagatct 28
>emb|X60238.1|ZMB73A Maize B73 X MO17 mitochondrial mRNA Length = 660 Score = 642 bits (324), Expect = 0.0 Identities = 403/430 (93%), Gaps = 12/430 (2%) Strand = Plus / Minus Query: 191 gtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 250 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 gtagacccggatactaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 453 Query: 251 tgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgactttacatttagg 310 |||||||||||||| ||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 452 tgaagacggatgcgacgggaagaaatggcatttagaagtgttgctaacttgacatttagg 393 Query: 311 tttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccgttggt 370 |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 392 tttcggcataacaaagcttgcactgtcttttcacacttaggcgcacagcgtgccgctggt 333 Query: 371 aatgattctac------tacggtgctgcaaattcgcaagctgatcc------taagtaat 418 ||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 332 aatgattctactacttttacggtgctgcaaattcgcaagctgatccgtagattaagtaat 273 Query: 419 cgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaat 478 ||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 272 cgttgttgttcattggattcctccagaatgacttcgttaggattgaagaattgctgcaat 213 Query: 479 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 gattcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 153 Query: 539 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 598 |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 152 ttccgacttaatatgagaaagcctataaaacaacaagctactatcatttcttcattatag 93 Query: 599 attgagatct 608 ||| |||||| Sbjct: 92 attaagatct 83 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 121 accccccaccctcacctttcttaggactatcaagccttct 160 ||||||||||||||||||||| |||||||| ||||||||| Sbjct: 624 accccccaccctcacctttctgaggactataaagccttct 585
>gb|AY831974.1| Lonicera sp. Bergthorsson 0301 ATPase subunit 4 (atp4) gene, partial cds; mitochondrial Length = 494 Score = 638 bits (322), Expect = e-180 Identities = 403/430 (93%) Strand = Plus / Minus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| |||||| |||||| | |||||||||||||||||| ||||||||||||| Sbjct: 468 tagaagctttcaacgtacacccggggaaaaatctttcactcactgagaagtgaaaacctg 409 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctg 296 |||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 408 tgactagatcgtcctgaagacggatgcgacgggaagaagtggcatttggaagtgttgctg 349 Query: 297 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 356 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 acttaacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 289 Query: 357 agcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagta 416 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 288 agcgtgccattggtaatgattctactacggtgccacaaattcgcaagctgatcctaagta 229 Query: 417 atcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgca 476 ||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||| Sbjct: 228 atcgttgttgttcattggattccggaggaactacttcgttaggattggggaattgctgcg 169 Query: 477 attcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaac 536 ||||||||||||||| || |||||||||||||||||| |||||||||| |||||||||| Sbjct: 168 attcttcctgaatagcctggattctcccgtcgagagtcactttgaaagtattacctaaac 109 Query: 537 tcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattat 596 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 tcttccgactgaatatgataaagcctataaaacaacgagctactatcatttcttcattat 49 Query: 597 agattgagat 606 |||||||||| Sbjct: 48 agattgagat 39
>gb|AY831975.1| Mahonia bealei ATPase subunit 4 (atp4) gene, partial cds; mitochondrial Length = 493 Score = 634 bits (320), Expect = e-179 Identities = 404/432 (93%) Strand = Plus / Minus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| |||||| |||||| |||||||||||||||||||| ||||||||||||| Sbjct: 468 tagaagctttcaacgtacacccggggacaaatctttcactcactgagaagtgaaaacctg 409 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctg 296 |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 408 tgactatatcgtcctgaagacggatgcgacgggaagaagtggcatttggaagtgttgctg 349 Query: 297 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 356 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 acttaacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 289 Query: 357 agcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagta 416 ||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 288 agcgtgctgttggtaatgattctactacggtgccacaaatttgcaagctgatcctaagta 229 Query: 417 atcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgca 476 ||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||| Sbjct: 228 atcgttgttgttcattggattccggaggaactacttcgttaggattggggaattgctgcg 169 Query: 477 attcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaac 536 ||||||||||||||| ||||||||||||| ||||||| |||||||||| |||||||||| Sbjct: 168 attcttcctgaatagcctcgattctcccgccgagagtcactttgaaagtattacctaaac 109 Query: 537 tcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattat 596 |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 108 tcttccgacttaatatgataaagcctataaaacgacgagctactatcatttcttcattat 49 Query: 597 agattgagatct 608 |||||||||||| Sbjct: 48 agattgagatct 37
>gb|AY831976.1| Nymphaea sp. Bergthorsson 0401 ATPase subunit 4 (atp4) gene, partial cds; mitochondrial Length = 493 Score = 618 bits (312), Expect = e-174 Identities = 402/432 (93%) Strand = Plus / Minus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||| Sbjct: 467 tagaagctttcaacgcacacccggggacaaatctttcactcactgagaagtgaaaacctt 408 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctg 296 |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 407 tgactatatcgtcctgaagacggatgcgacgggaagaagtggcatttggaagtgttgctg 348 Query: 297 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 356 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347 acttaacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 288 Query: 357 agcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagta 416 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 287 agcgtgccgttggtaatgattctactacggtgccacaaattcgcaagctgatcctaagta 228 Query: 417 atcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgca 476 ||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||| Sbjct: 227 atcgttgttgttcattggattccggaggaactacttcgttaggattggggaattgctgcg 168 Query: 477 attcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaac 536 ||||||||||||||| ||||||||||||||||||| | ||| |||||||| ||| ||| Sbjct: 167 attcttcctgaatagcctcgattctcccgtcgagaatcacttggaaagtctgacccgaac 108 Query: 537 tcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattat 596 |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 107 tcttccgactgaatataagaaagcctataaaacgacgagctactatcatttcttcattat 48 Query: 597 agattgagatct 608 |||||||||||| Sbjct: 47 agattgagatct 36
>emb|X60239.1|ZMB73B Maize B73 cms-T mitochondrion mRNA Length = 666 Score = 611 bits (308), Expect = e-171 Identities = 399/430 (92%), Gaps = 12/430 (2%) Strand = Plus / Minus Query: 191 gtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 gtagacccggatacaaatctttcactcactgaaaagtgaaaacctgtgactatatcgtcc 453 Query: 251 tgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgactttacatttagg 310 |||||||||||||| ||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 452 tgaagacggatgcgacgggaagaaatggcatttagaagtgttgctaacttgacatttagg 393 Query: 311 tttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccgttggt 370 |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||| Sbjct: 392 tttcggcataacaaagcttgcactgtcttttcacacttaggcgcgcagcgtgccgctggt 333 Query: 371 aatgattctac------tacggtgctgcaaattcgcaagctgatc------ctaagtaat 418 ||| ||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 332 aataattctactacttttacggtgctgcaaattcgcaagctgatctgtagattaagtaat 273 Query: 419 cgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaat 478 ||||||| |||| ||||||||||| |||| ||||||||||||||| |||||||||||||| Sbjct: 272 cgttgttgttcaatggattcctccagaatgacttcgttaggattgcagaattgctgcaat 213 Query: 479 tcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 gattcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactc 153 Query: 539 ttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattatag 598 |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 152 ttccgacttaatatgagaaagcctataaaacaacaagctactatcatttcttcattatag 93 Query: 599 attgagatct 608 ||| |||||| Sbjct: 92 attaagatct 83 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 121 accccccaccctcacctttcttaggactatcaagccttct 160 |||||||||||||||||||||||||||||| ||||||||| Sbjct: 624 accccccaccctcacctttcttaggactataaagccttct 585
>gb|AY831978.1| Asarum sp. Qiu 96018 ATPase subunit 4 (atp4) gene, partial cds; mitochondrial Length = 408 Score = 607 bits (306), Expect = e-170 Identities = 381/406 (93%) Strand = Plus / Minus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| |||||| ||||||| | |||||||||||||||||| ||||||||||||| Sbjct: 406 tagaagctttcaacgtacacccggagaaaaatctttcactcactgagaagtgaaaacctg 347 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctg 296 |||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||| Sbjct: 346 tgactatatcgtcctgaagacggatgcgacgggaagaaatggcatttggaagtgttgctg 287 Query: 297 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 227 Query: 357 agcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagta 416 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 226 agcgtgccgttggtaatgattctactacggtgccacaaattcgcaagctgatcctaagta 167 Query: 417 atcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgca 476 ||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||| Sbjct: 166 atcgttgttgttcattggattccggaggaactacttcgttaggattggggaattgctgcg 107 Query: 477 attcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaac 536 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 106 attcttcctgaatagcctcgattctcccgtcgagagtcgctttgaaagtcttaccaaaac 47 Query: 537 tcttccgactgaatatgagaaagcctataaaacaacgagctactat 582 |||||||||| ||||||| |||||||||||||| |||||||||||| Sbjct: 46 tcttccgactaaatatgataaagcctataaaacgacgagctactat 1
>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 368801 Score = 603 bits (304), Expect = e-169 Identities = 400/432 (92%) Strand = Plus / Plus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 54623 tagaagctttcaacgtagacccggggacaaatctttcactcactgagaagtgaaaacctg 54682 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctg 296 |||||| ||| |||||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 54683 tgactagatcatcctgaagacgggtgcgacgggaagaagtggcatttggaagtgttgctg 54742 Query: 297 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 356 |||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 54743 acttaacatttaggtttcgacataacaaagcttgcactgttttttcgcacttaggcgcac 54802 Query: 357 agcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagta 416 |||||||| |||||||||||||||||||||| | |||||||||||||||| |||||||| Sbjct: 54803 agcgtgccattggtaatgattctactacggttccacaaattcgcaagctgaccctaagta 54862 Query: 417 atcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgca 476 ||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||| Sbjct: 54863 atcgttgttgttcattggattccggaggaactacttcgttaggattggggaattgctgcg 54922 Query: 477 attcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaac 536 ||||||||||||||| || ||||||| |||||||||| |||||||||| |||||||||| Sbjct: 54923 attcttcctgaatagcctggattctctcgtcgagagtcactttgaaagtattacctaaac 54982 Query: 537 tcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattat 596 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 54983 tcttccgactgaatatgataaagcctataaaacaacgagctactatcatttcttcattat 55042 Query: 597 agattgagatct 608 |||||||||||| Sbjct: 55043 agattgagatct 55054 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 54 gtattggatccgctcttctgttagcatgaaca 85 |||||||||||||||||||||||||||||||| Sbjct: 54497 gtattggatccgctcttctgttagcatgaaca 54528
>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 501020 Score = 603 bits (304), Expect = e-169 Identities = 400/432 (92%) Strand = Plus / Plus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 177288 tagaagctttcaacgtagacccggggacaaatctttcactcactgagaagtgaaaacctg 177347 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctg 296 |||||| ||| |||||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 177348 tgactagatcatcctgaagacgggtgcgacgggaagaagtggcatttggaagtgttgctg 177407 Query: 297 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 356 |||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 177408 acttaacatttaggtttcgacataacaaagcttgcactgttttttcgcacttaggcgcac 177467 Query: 357 agcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagta 416 |||||||| |||||||||||||||||||||| | |||||||||||||||| |||||||| Sbjct: 177468 agcgtgccattggtaatgattctactacggttccacaaattcgcaagctgaccctaagta 177527 Query: 417 atcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgca 476 ||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||| Sbjct: 177528 atcgttgttgttcattggattccggaggaactacttcgttaggattggggaattgctgcg 177587 Query: 477 attcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaac 536 ||||||||||||||| || ||||||| |||||||||| |||||||||| |||||||||| Sbjct: 177588 attcttcctgaatagcctggattctctcgtcgagagtcactttgaaagtattacctaaac 177647 Query: 537 tcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattat 596 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 177648 tcttccgactgaatatgataaagcctataaaacaacgagctactatcatttcttcattat 177707 Query: 597 agattgagatct 608 |||||||||||| Sbjct: 177708 agattgagatct 177719 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 54 gtattggatccgctcttctgttagcatgaaca 85 |||||||||||||||||||||||||||||||| Sbjct: 177162 gtattggatccgctcttctgttagcatgaaca 177193
>dbj|AB020062.1| Beta vulgaris mitochondrial nad4L and orf25 genes for NADH dehydrogenase subunit 4L and ORF, complete cds Length = 1206 Score = 603 bits (304), Expect = e-169 Identities = 400/432 (92%) Strand = Plus / Minus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 1053 tagaagctttcaacgtagacccggggacaaatctttcactcactgagaagtgaaaacctg 994 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctg 296 |||||| ||| |||||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 993 tgactagatcatcctgaagacgggtgcgacgggaagaagtggcatttggaagtgttgctg 934 Query: 297 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 356 |||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 933 acttaacatttaggtttcgacataacaaagcttgcactgttttttcgcacttaggcgcac 874 Query: 357 agcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagta 416 |||||||| |||||||||||||||||||||| | |||||||||||||||| |||||||| Sbjct: 873 agcgtgccattggtaatgattctactacggttccacaaattcgcaagctgaccctaagta 814 Query: 417 atcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgca 476 ||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||| Sbjct: 813 atcgttgttgttcattggattccggaggaactacttcgttaggattggggaattgctgcg 754 Query: 477 attcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaac 536 ||||||||||||||| || ||||||| |||||||||| |||||||||| |||||||||| Sbjct: 753 attcttcctgaatagcctggattctctcgtcgagagtcactttgaaagtattacctaaac 694 Query: 537 tcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattat 596 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 tcttccgactgaatatgataaagcctataaaacaacgagctactatcatttcttcattat 634 Query: 597 agattgagatct 608 |||||||||||| Sbjct: 633 agattgagatct 622 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 54 gtattggatccgctcttctgttagcatgaaca 85 |||||||||||||||||||||||||||||||| Sbjct: 1179 gtattggatccgctcttctgttagcatgaaca 1148
>gb|AY831977.1| Piper betle ATPase subunit 4 (atp4) gene, partial cds; mitochondrial Length = 493 Score = 571 bits (288), Expect = e-159 Identities = 396/432 (91%) Strand = Plus / Minus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| |||||| |||| | | ||||||||||| || || |||||||| |||| Sbjct: 468 tagaagctttcaacgtacaccccgggaaaaatctttcacaaacggagaagtgaaagcctg 409 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctg 296 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 408 tgactatatcgtcctgaagacggatgcgacgggaagaagtggcatttagaagtgttgctg 349 Query: 297 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 356 |||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 348 acttgacattgaggtttcggcataacaaagcttgcactgtcttttcgcacttgggcgtgc 289 Query: 357 agcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagta 416 ||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||| Sbjct: 288 tgcgtgccgttggtaatgattctaatacggtgccacaaattcgcaagctgctcctaagta 229 Query: 417 atcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgca 476 ||||||||| ||||||||||||| |||| |||||||||||||||| ||||||||||| Sbjct: 228 atcgttgttgttcattggattccggaggaactacttcgttaggattggggaattgctgca 169 Query: 477 attcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaac 536 ||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 168 attcttcctgaatagcctcgattctcccgtcgagagtcgctttgaaagtctgacctaaac 109 Query: 537 tcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattat 596 |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 108 tcttccgactgaatatgataaagcctataaaacaacgagctactataatttcttcattat 49 Query: 597 agattgagatct 608 ||||||| |||| Sbjct: 48 agattgatatct 37
>emb|X06310.1|MINTOR25 Nicotiana tabacum mitochondrial DNA for ORF 25 Length = 735 Score = 557 bits (281), Expect = e-155 Identities = 347/369 (94%) Strand = Plus / Minus Query: 240 ctatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgact 299 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 551 ctatatcgtcctgaagacggatgcgacgggaagaagtggcatttggaagtgttgctgact 492 Query: 300 ttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagc 359 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 taacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagc 432 Query: 360 gtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagtaatc 419 ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 431 gtgccattggtaatgattctactacggtgccacaaattcgcaagctgatcctaagtaatc 372 Query: 420 gttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaatt 479 |||||| ||||||||||||| |||| |||||||||||||||| |||||||||| ||| Sbjct: 371 gttgttgttcattggattccggaggaactacttcgttaggattggggaattgctgcgatt 312 Query: 480 cttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactct 539 |||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 311 cttcctgaatagcctggattctcccgtcgagagtcactttgaaagtcttacctaaactct 252 Query: 540 tccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattataga 599 ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 251 tccgactgaatatgataaagcctataaaacatagagctactatcatttcttcattataaa 192 Query: 600 ttgagatct 608 ||||||||| Sbjct: 191 ttgagatct 183 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 59 ggatccgctcttctgttagcatgaaca 85 |||||||||||||||||| |||||||| Sbjct: 735 ggatccgctcttctgttaacatgaaca 709
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 557 bits (281), Expect = e-155 Identities = 347/369 (94%) Strand = Plus / Plus Query: 240 ctatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctgact 299 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 113999 ctatatcgtcctgaagacggatgcgacgggaagaagtggcatttggaagtgttgctgact 114058 Query: 300 ttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagc 359 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114059 taacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcacagc 114118 Query: 360 gtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagtaatc 419 ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 114119 gtgccattggtaatgattctactacggtgccacaaattcgcaagctgatcctaagtaatc 114178 Query: 420 gttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaatt 479 |||||| ||||||||||||| |||| |||||||||||||||| |||||||||| ||| Sbjct: 114179 gttgttgttcattggattccggaggaactacttcgttaggattggggaattgctgcgatt 114238 Query: 480 cttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactct 539 |||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 114239 cttcctgaatagcctggattctcccgtcgagagtcactttgaaagtcttacctaaactct 114298 Query: 540 tccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattataga 599 ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 114299 tccgactgaatatgataaagcctataaaacatagagctactatcatttcttcattataaa 114358 Query: 600 ttgagatct 608 ||||||||| Sbjct: 114359 ttgagatct 114367 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 54 gtattggatccgctcttctgttagcatgaaca 85 ||||||||||||||||||||||| |||||||| Sbjct: 113810 gtattggatccgctcttctgttaacatgaaca 113841
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 543 bits (274), Expect = e-151 Identities = 349/374 (93%) Strand = Plus / Plus Query: 235 tgtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgc 294 |||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||| Sbjct: 41432 tgtgactagatcgtcctgaaaacggatgcgacgggaagaagtggcatttgtaagtgttgc 41491 Query: 295 tgactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgc 354 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 41492 tgacttaacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgc 41551 Query: 355 acagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaag 414 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 41552 acagcgtgccattggtaatgattctactacggtgccacaaattcgcaagctgatcctaag 41611 Query: 415 taatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctg 474 ||||||||||| ||||||||||||| |||| |||||||||||||||| ||||||||| Sbjct: 41612 taatcgttgttgttcattggattccggaggaactacttcgttaggattggggaattgctg 41671 Query: 475 caattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaa 534 | ||||||||||||||| || |||||||||||||||||| ||||||||||| ||||||| Sbjct: 41672 cgattcttcctgaatagcctggattctcccgtcgagagtcgctttgaaagtcgtacctaa 41731 Query: 535 actcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatt 594 |||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 41732 actcttacgactgaatatgataaagcctataaaacaaagagctactatcatttcttcatt 41791 Query: 595 atagattgagatct 608 |||||||||||||| Sbjct: 41792 atagattgagatct 41805 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 54 gtattggatccgctcttctgttagcatgaaca 85 |||||||||||||||||||| |||||||||| Sbjct: 41247 gtattggatccgctcttctgagagcatgaaca 41278
>gb|AY831972.1| Eschscholzia californica ATPase subunit 4 (atp4) gene, partial cds; mitochondrial Length = 404 Score = 529 bits (267), Expect = e-147 Identities = 349/377 (92%) Strand = Plus / Minus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| |||||| |||||| |||||||||||||||||||| ||||||||||||| Sbjct: 377 tagaagctttcaacgtacacccggggacaaatctttcactcactgagaagtgaaaacctg 318 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctg 296 |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 317 tgactatatcgtcctgaagacggatgcgacgggaagaagtggcatttggaagtgttgctg 258 Query: 297 actttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 356 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 acttaacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcac 198 Query: 357 agcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagta 416 ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 197 agcgtgccgttggtaatgattctactacggtgccacaaatttgcaagctgatcctaagta 138 Query: 417 atcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgca 476 ||||||||| ||| ||||||||| |||| |||||||||||| || |||||||||| Sbjct: 137 atcgttgttgttccttggattccggaggaactacttcgttaggnntggggaattgctgcg 78 Query: 477 attcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaac 536 ||||||||||||||| |||||||||| |||||||||| |||||||||| || ||||||| Sbjct: 77 attcttcctgaatagcctcgattctcgcgtcgagagtcactttgaaagtattccctaaac 18 Query: 537 tcttccgactgaatatg 553 ||||||||||||||||| Sbjct: 17 tcttccgactgaatatg 1
>gb|M88258.1|ATHCOLUMB Arabidopsis thaliana Length = 2250 Score = 529 bits (267), Expect = e-147 Identities = 349/375 (93%), Gaps = 1/375 (0%) Strand = Plus / Plus Query: 235 tgtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgc 294 |||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||| Sbjct: 181 tgtgactagatcgtcctgaaaacggatgcgacgggaagaagtggcatttgtaagtgttgc 240 Query: 295 tgactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgc 354 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgacttaacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgc 300 Query: 355 acagcgtg-ccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaa 413 |||||||| || |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 301 acagcgtggccattggtaatgattctactacggtgccacaaattcgcaagctgatcctaa 360 Query: 414 gtaatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgct 473 |||||||||||| ||||||||||||| |||| |||||||||||||||| |||||||| Sbjct: 361 gtaatcgttgttgttcattggattccggaggaactacttcgttaggattggggaattgct 420 Query: 474 gcaattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttaccta 533 || ||||||||||||||| || |||||||||||||||||| ||||||||||| |||||| Sbjct: 421 gcgattcttcctgaatagcctggattctcccgtcgagagtcactttgaaagtcgtaccta 480 Query: 534 aactcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcat 593 ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 481 aactcttacgactgaatatgataaagcctataaaacaaagagctactatcatttcttcat 540 Query: 594 tatagattgagatct 608 ||||||||||||||| Sbjct: 541 tatagattgagatct 555
>emb|X67105.1|MTATNAD4L A.thaliana mitochondrial DNA for genes nad4L and orf25 Length = 4053 Score = 527 bits (266), Expect = e-146 Identities = 347/374 (92%) Strand = Plus / Minus Query: 235 tgtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgc 294 |||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||| Sbjct: 3672 tgtgactagatcgtcctgaaaacggatgcgacgggaagaagtggcatttgtaagtgttgc 3613 Query: 295 tgactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgc 354 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3612 tgacttaacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgc 3553 Query: 355 acagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaag 414 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 3552 acagcgtgccattggtaatgattctactacggtgccacaaattcgcaagctgatcctaag 3493 Query: 415 taatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctg 474 ||||||||||| ||||||||||||| |||| |||||||||||||||| ||||||||| Sbjct: 3492 taatcgttgttgttcattggattccggaggaactacttcgttaggattggggaattgctg 3433 Query: 475 caattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaa 534 | ||||||||||||||| || || |||||||||||||| ||||||||||| ||||||| Sbjct: 3432 cgattcttcctgaatagcctggaggctcccgtcgagagtcactttgaaagtcgtacctaa 3373 Query: 535 actcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatt 594 |||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 3372 actcttacgactgaatatgataaagcctataaaacaaagagctactatcatttcttcatt 3313 Query: 595 atagattgagatct 608 |||||||||||||| Sbjct: 3312 atagattgagatct 3299 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 54 gtattggatccgctcttctgttagcatgaaca 85 |||||||||||||||||||| |||||||||| Sbjct: 3857 gtattggatccgctcttctgagagcatgaaca 3826
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 527 bits (266), Expect = e-146 Identities = 347/374 (92%) Strand = Plus / Plus Query: 235 tgtgactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgc 294 |||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||| Sbjct: 188207 tgtgactagatcgtcctgaaaacggatgcgacgggaagaagtggcatttgtaagtgttgc 188266 Query: 295 tgactttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgc 354 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188267 tgacttaacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgc 188326 Query: 355 acagcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaag 414 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 188327 acagcgtgccattggtaatgattctactacggtgccacaaattcgcaagctgatcctaag 188386 Query: 415 taatcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctg 474 ||||||||||| ||||||||||||| |||| |||||||||||||||| ||||||||| Sbjct: 188387 taatcgttgttgttcattggattccggaggaactacttcgttaggattggggaattgctg 188446 Query: 475 caattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaa 534 | ||||||||||||||| || || |||||||||||||| ||||||||||| ||||||| Sbjct: 188447 cgattcttcctgaatagcctggaggctcccgtcgagagtcactttgaaagtcgtacctaa 188506 Query: 535 actcttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcatt 594 |||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 188507 actcttacgactgaatatgataaagcctataaaacaaagagctactatcatttcttcatt 188566 Query: 595 atagattgagatct 608 |||||||||||||| Sbjct: 188567 atagattgagatct 188580 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 54 gtattggatccgctcttctgttagcatgaaca 85 |||||||||||||||||||| |||||||||| Sbjct: 188022 gtattggatccgctcttctgagagcatgaaca 188053
>gb|DQ202504.1| Brassica oleracea ATPase subunit 4 (atp4) gene, partial cds; mitochondrial Length = 431 Score = 509 bits (257), Expect = e-141 Identities = 326/349 (93%) Strand = Plus / Minus Query: 260 atgcggcgggaagaagtggcatttagaagtgttgctgactttacatttaggtttcggcat 319 ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 431 atgcgacgggaagaagtggcatttgtaagtgttgctgacttaacatttaggtttcggcat 372 Query: 320 aacaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccgttggtaatgattct 379 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 371 aacaaagcttgcactgtcttttcgcacttaggcgcacagcgtgccattggtaatgattct 312 Query: 380 actacggtgctgcaaattcgcaagctgatcctaagtaatcgttgttcttcattggattcc 439 |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 311 actacggtgccacaaattcgcaagctgatcctaagtaatcgttgttgttcattggattcc 252 Query: 440 tccggaattacttcgttaggattgaagaattgctgcaattcttcctgaatagactcgatt 499 |||| |||||||||||||||| |||||||||| ||||||||||||||| || |||| Sbjct: 251 ggaggaactacttcgttaggattggggaattgctgcgattcttcctgaatagcctggatt 192 Query: 500 ctcccgtcgagagtttctttgaaagtcttacctaaactcttccgactgaatatgagaaag 559 |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| |||| Sbjct: 191 ctcccgtcgagagtcactttgaaagtcgtacctaaactcttacgactgaatatgataaag 132 Query: 560 cctataaaacaacgagctactatcatttcttcattatagattgagatct 608 |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 131 cctataaaacaaagagctactatcatttcttcattatagattgagatct 83
>emb|X65855.1|MTZMST Z.mays mitochondrial DNA sequence T Length = 519 Score = 410 bits (207), Expect = e-111 Identities = 274/297 (92%), Gaps = 12/297 (4%) Strand = Plus / Minus Query: 324 aagcttgcactgtcttttcgcacttaggcgcacagcgtgccgttggtaatgattctacta 383 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 519 aagcttgcactgtcttttcgcacttaggcgcgcagcgtgccgctggtaatgattctacta 460 Query: 384 c------ggtgctgcaaattcgcaagctgatcc------taagtaatcgttgttcttcat 431 | ||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 459 cttttacggtgctgcaaattcgcaagctgatctgtagattaagtaatcgttgttgttcaa 400 Query: 432 tggattcctccggaattacttcgttaggattgaagaattgctgcaattcttcctgaatag 491 ||||||||||| |||| ||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 399 tggattcctccagaatgacttcgttaggattgcagaattgctgcaatgattcctgaatag 340 Query: 492 actcgattctcccgtcgagagtttctttgaaagtcttacctaaactcttccgactgaata 551 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 339 actcgattctcccgtcgagagtttctttgaaagtcttacctaaactcttccgacttaata 280 Query: 552 tgagaaagcctataaaacaacgagctactatcatttcttcattatagattgagatct 608 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 tgagaaagcctataaaacaacgagctactatcatttcttcattatagattgagatct 223
>gb|AY831980.1| Amborella trichopoda ATPase subunit 4 (atp4) gene, partial cds; mitochondrial Length = 473 Score = 392 bits (198), Expect = e-106 Identities = 246/262 (93%) Strand = Plus / Minus Query: 178 agaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctgt 237 ||||||||| ||||||||||||| |||||||||||||||||| | |||||||||||||| Sbjct: 446 agaagctttcaacgtagacccggggacaaatctttcactcactaagaagtgaaaacctgt 387 Query: 238 gactatatcgtcctgaagacggatgcggcgggaagaagtggcatttagaagtgttgctga 297 ||||| ||||||||||||||||||||| |||||||||||||||||| || |||||||||| Sbjct: 386 gactagatcgtcctgaagacggatgcgacgggaagaagtggcatttggacgtgttgctga 327 Query: 298 ctttacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcaca 357 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 cttaacatttaggtttcggcataacaaagcttgcactgtcttttcgcacttaggcgcaca 267 Query: 358 gcgtgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagtaa 417 ||||||| |||||||||||||||||||||||| |||||| ||||||| ||||||||||| Sbjct: 266 gcgtgccattggtaatgattctactacggtgccacaaatttgcaagcttatcctaagtaa 207 Query: 418 tcgttgttcttcattggattcc 439 |||||||| ||||||||||||| Sbjct: 206 tcgttgttgttcattggattcc 185 Score = 220 bits (111), Expect = 4e-54 Identities = 135/143 (94%) Strand = Plus / Minus Query: 466 gaattgctgcaattcttcctgaatagactcgattctcccgtcgagagtttctttgaaagt 525 |||||||||| ||||||||||||||| || |||||||||||||||||| |||||||||| Sbjct: 170 gaattgctgcgattcttcctgaatagcctggattctcccgtcgagagtcgctttgaaagt 111 Query: 526 cttacctaaactcttccgactgaatatgagaaagcctataaaacaacgagctactatcat 585 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 110 cttacctaaactcttccgactaaatatgataaagcctataaaacaacgagctactatcat 51 Query: 586 ttcttcattatagattgagatct 608 |||||||||||||||||| |||| Sbjct: 50 ttcttcattatagattgatatct 28
>gb|M31329.1|MZEMTORF25 Maize (V3) mitochondrial ORF25 protein gene, 5' end Length = 500 Score = 391 bits (197), Expect = e-105 Identities = 272/297 (91%), Gaps = 15/297 (5%) Strand = Plus / Minus Query: 324 aagcttgcactgtcttttcgcacttaggcgcacagcgtgccgttggtaatgattctacta 383 ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| Sbjct: 500 aagcttgcactgtcttttcgcacttaggcgcgca---tgccgctggtaatgattctacta 444 Query: 384 c------ggtgctgcaaattcgcaagctgatcc------taagtaatcgttgttcttcat 431 | ||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 443 cttttacggtgctgcaaattcgcaagctgatctgtagattaagtaatcgttgttgttcat 384 Query: 432 tggattcctccggaattacttcgttaggattgaagaattgctgcaattcttcctgaatag 491 ||||||||||| |||| ||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 383 tggattcctccagaatgacttcgttaggattgcagaattgctgcaatgattcctgaatag 324 Query: 492 actcgattctcccgtcgagagtttctttgaaagtcttacctaaactcttccgactgaata 551 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 323 actcgattctcccgtcgagagtttctttgaaagtcttacctaaactcttccgacttaata 264 Query: 552 tgagaaagcctataaaacaacgagctactatcatttcttcattatagattgagatct 608 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 tgagaaagcctataaaacaacgagctactatcatttcttcattatagattgagatct 207
>gb|M31330.1|MZEMTORF2N Maize (N) mitochondrial ORF25 protein gene, 5' end Length = 423 Score = 359 bits (181), Expect = 7e-96 Identities = 216/228 (94%), Gaps = 6/228 (2%) Strand = Plus / Minus Query: 387 tgctgcaaattcgcaagctgatcc------taagtaatcgttgttcttcattggattcct 440 |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 423 tgctgcaaattcgcaagctgatccgtagattaagtaatcgttgttgttcattggattcct 364 Query: 441 ccggaattacttcgttaggattgaagaattgctgcaattcttcctgaatagactcgattc 500 || |||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 363 ccagaatgacttcgttaggattgaagaattgctgcaatgattcctgaatagactcgattc 304 Query: 501 tcccgtcgagagtttctttgaaagtcttacctaaactcttccgactgaatatgagaaagc 560 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 303 tcccgtcgagagtttctttgaaagtcttacctaaactcttccgacttaatatgagaaagc 244 Query: 561 ctataaaacaacgagctactatcatttcttcattatagattgagatct 608 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 ctataaaacaacgagctactatcatttcttcattatagattgagatct 196
>gb|U22068.1|SBU22068 Sorghum bicolor hypothetical URF265 (orf265) gene, mitochondrial gene encoding mitochondrial protein, complete cds Length = 1356 Score = 327 bits (165), Expect = 2e-86 Identities = 183/189 (96%) Strand = Plus / Minus Query: 361 tgccgttggtaatgattctactacggtgctgcaaattcgcaagctgatcctaagtaatcg 420 ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 590 tgccggtggtaatggttctactacggtgctgcaaattcgcaagctgattctaagtaaccg 531 Query: 421 ttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaattc 480 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 530 ttgttgttcattggattcctccggaatgacttcgttaggattgaagaattgctgcaattc 471 Query: 481 ttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactctt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 ttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaactctt 411 Query: 541 ccgactgaa 549 ||||||||| Sbjct: 410 ccgactgaa 402
>dbj|D10685.1|DARMTPKT5 Daucus carota mitochondrial PKT5 gene Length = 2009 Score = 307 bits (155), Expect = 2e-80 Identities = 183/191 (95%), Gaps = 1/191 (0%) Strand = Plus / Minus Query: 418 tcgttgttcttcattggattcctccggaattacttcgttaggattgaagaattgctgcaa 477 |||||||| ||||| |||||||||| |||| ||||||||||||||| ||||||||||||| Sbjct: 1903 tcgttgttgttcat-ggattcctccagaatgacttcgttaggattgcagaattgctgcaa 1845 Query: 478 ttcttcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaact 537 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1844 tgattcctgaatagactcgattctcccgtcgagagtttctttgaaagtcttacctaaact 1785 Query: 538 cttccgactgaatatgagaaagcctataaaacaacgagctactatcatttcttcattata 597 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1784 cttccgacttaatatgagaaagcctataaaacaacgagctactatcatttcttcattata 1725 Query: 598 gattgagatct 608 ||||||||||| Sbjct: 1724 gattgagatct 1714 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Minus Query: 324 aagcttgcactgtcttttcgcacttaggcgcacagcgtgccgttggtaatgattctacta 383 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 2009 aagcttgcactgtcttttcgcacttaggcgcgcagcgtgccgctggtaatgattctacta 1950 Query: 384 c 384 | Sbjct: 1949 c 1949
>gb|AF361059.1|AF361059 Pinus sylvestris orf25 gene, partial cds; mitochondrial gene for mitochondrial product Length = 500 Score = 212 bits (107), Expect = 1e-51 Identities = 143/155 (92%) Strand = Plus / Plus Query: 212 tcactcactgaaaagtgaaaacctgtgactatatcgtcctgaagacggatgcggcgggaa 271 ||||||||||| |||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 59 tcactcactgagaagtgaaaccctgtgactatatcgtcccgaagacggatgcgacgggaa 118 Query: 272 gaagtggcatttagaagtgttgctgactttacatttaggtttcggcataacaaagcttgc 331 ||| |||||||| || |||||||||||| |||||||||||||||||| ||| ||||||| Sbjct: 119 gaaatggcatttggaggtgttgctgactccacatttaggtttcggcatgacacagcttgc 178 Query: 332 actgtcttttcgcacttaggcgcacagcgtgccgt 366 |||||| |||||||||||||||||||||||||||| Sbjct: 179 actgtcctttcgcacttaggcgcacagcgtgccgt 213 Score = 139 bits (70), Expect = 1e-29 Identities = 175/210 (83%) Strand = Plus / Plus Query: 398 cgcaagctgatcctaagtaatcgttgttcttcattggattcctccggaattacttcgtta 457 ||||||||||||||||||||| | |||| ||||||||||||| | || ||||||||| Sbjct: 254 cgcaagctgatcctaagtaattgctgttgttcattggattccagagaaaccacttcgtta 313 Query: 458 ggattgaagaattgctgcaattcttcctgaatagactcgattctcccgtcgagagtttct 517 |||||| ||||||||||||||| |||||||| ||||||||||||||| | | || Sbjct: 314 ggattggggaattgctgcaattccctctgaatagctccgattctcccgtcgaaaatcgct 373 Query: 518 ttgaaagtcttacctaaactcttccgactgaatatgagaaagcctataaaacaacgagct 577 ||| |||| ||||| |||||| || || ||||||||||||||||| ||| ||||||| Sbjct: 374 ttggaagtattaccaaaactcctctgaagaaatatgagaaagcctatggaacgacgagct 433 Query: 578 actatcatttcttcattatagattgagatc 607 |||||| ||||||||||| | ||||||||| Sbjct: 434 actatcgtttcttcattacatattgagatc 463
>gb|AF361058.1|AF361058 Pinus mugo orf25 gene, partial cds; mitochondrial gene for mitochondrial product Length = 500 Score = 212 bits (107), Expect = 1e-51 Identities = 143/155 (92%) Strand = Plus / Plus Query: 212 tcactcactgaaaagtgaaaacctgtgactatatcgtcctgaagacggatgcggcgggaa 271 ||||||||||| |||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 59 tcactcactgagaagtgaaaccctgtgactatatcgtcccgaagacggatgcgacgggaa 118 Query: 272 gaagtggcatttagaagtgttgctgactttacatttaggtttcggcataacaaagcttgc 331 ||| |||||||| || |||||||||||| |||||||||||||||||| ||| ||||||| Sbjct: 119 gaaatggcatttggaggtgttgctgactccacatttaggtttcggcatgacacagcttgc 178 Query: 332 actgtcttttcgcacttaggcgcacagcgtgccgt 366 |||||| |||||||||||||||||||||||||||| Sbjct: 179 actgtcctttcgcacttaggcgcacagcgtgccgt 213 Score = 139 bits (70), Expect = 1e-29 Identities = 175/210 (83%) Strand = Plus / Plus Query: 398 cgcaagctgatcctaagtaatcgttgttcttcattggattcctccggaattacttcgtta 457 ||||||||||||||||||||| | |||| ||||||||||||| | || ||||||||| Sbjct: 254 cgcaagctgatcctaagtaattgctgttgttcattggattccagagaaaccacttcgtta 313 Query: 458 ggattgaagaattgctgcaattcttcctgaatagactcgattctcccgtcgagagtttct 517 |||||| ||||||||||||||| |||||||| ||||||||||||||| | | || Sbjct: 314 ggattggggaattgctgcaattccctctgaatagctccgattctcccgtcgaaaatcgct 373 Query: 518 ttgaaagtcttacctaaactcttccgactgaatatgagaaagcctataaaacaacgagct 577 ||| |||| ||||| |||||| || || ||||||||||||||||| ||| ||||||| Sbjct: 374 ttggaagtattaccaaaactcctctgaagaaatatgagaaagcctatggaacgacgagct 433 Query: 578 actatcatttcttcattatagattgagatc 607 |||||| ||||||||||| | ||||||||| Sbjct: 434 actatcgtttcttcattacatattgagatc 463
>gb|AY831968.1| Pinus thunbergii ATPase subunit 4 (atp4) gene, partial cds; mitochondrial Length = 535 Score = 212 bits (107), Expect = 1e-51 Identities = 143/155 (92%) Strand = Plus / Minus Query: 212 tcactcactgaaaagtgaaaacctgtgactatatcgtcctgaagacggatgcggcgggaa 271 ||||||||||| |||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 451 tcactcactgagaagtgaaaccctgtgactatatcgtcccgaagacggatgcgacgggaa 392 Query: 272 gaagtggcatttagaagtgttgctgactttacatttaggtttcggcataacaaagcttgc 331 ||| |||||||| || |||||||||||| |||||||||||||||||| ||| ||||||| Sbjct: 391 gaaatggcatttggaggtgttgctgactccacatttaggtttcggcatgacacagcttgc 332 Query: 332 actgtcttttcgcacttaggcgcacagcgtgccgt 366 |||||| |||||||||||||||||||||||||||| Sbjct: 331 actgtcctttcgcacttaggcgcacagcgtgccgt 297 Score = 139 bits (70), Expect = 1e-29 Identities = 175/210 (83%) Strand = Plus / Minus Query: 398 cgcaagctgatcctaagtaatcgttgttcttcattggattcctccggaattacttcgtta 457 ||||||||||||||||||||| | |||| ||||||||||||| || ||||||||| Sbjct: 256 cgcaagctgatcctaagtaattgctgttgttcattggattccggataaaccacttcgtta 197 Query: 458 ggattgaagaattgctgcaattcttcctgaatagactcgattctcccgtcgagagtttct 517 |||||| ||||||||||||||| |||||||| |||||||| |||||| | | || Sbjct: 196 ggattggggaattgctgcaattccctctgaatagctccgattctctcgtcgaaaatcgct 137 Query: 518 ttgaaagtcttacctaaactcttccgactgaatatgagaaagcctataaaacaacgagct 577 ||| |||| ||||| |||||| || |||| ||||||||||||||||| ||| ||||||| Sbjct: 136 ttggaagtattaccaaaactcctctgactaaatatgagaaagcctatggaacgacgagct 77 Query: 578 actatcatttcttcattatagattgagatc 607 |||||| ||||||||||| | ||||||||| Sbjct: 76 actatcgtttcttcattacatattgagatc 47 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 134 acctttcttaggactatcaagccttct 160 ||||||||||||||||||||||||||| Sbjct: 535 acctttcttaggactatcaagccttct 509
>gb|AF359457.1|AF359457 Abies alba unknown gene; mitochondrial gene for mitochondrial product Length = 464 Score = 204 bits (103), Expect = 2e-49 Identities = 142/155 (91%) Strand = Plus / Plus Query: 212 tcactcactgaaaagtgaaaacctgtgactatatcgtcctgaagacggatgcggcgggaa 271 ||||||||||| |||||||| ||||| |||||||||||| ||||||||||||| |||||| Sbjct: 49 tcactcactgagaagtgaaaccctgttactatatcgtcccgaagacggatgcgacgggaa 108 Query: 272 gaagtggcatttagaagtgttgctgactttacatttaggtttcggcataacaaagcttgc 331 ||| |||||||| || |||||||||||| |||||||||||||||||| ||| ||||||| Sbjct: 109 gaaatggcatttggaggtgttgctgactccacatttaggtttcggcatgacacagcttgc 168 Query: 332 actgtcttttcgcacttaggcgcacagcgtgccgt 366 |||||| |||||||||||||||||||||||||||| Sbjct: 169 actgtcctttcgcacttaggcgcacagcgtgccgt 203 Score = 147 bits (74), Expect = 5e-32 Identities = 176/210 (83%) Strand = Plus / Plus Query: 398 cgcaagctgatcctaagtaatcgttgttcttcattggattcctccggaattacttcgtta 457 ||||||||||| ||||||||| | |||| ||||||||||||| | ||| ||||||||| Sbjct: 244 cgcaagctgattctaagtaattgctgttgttcattggattccggagaaatcacttcgtta 303 Query: 458 ggattgaagaattgctgcaattcttcctgaatagactcgattctcccgtcgagagtttct 517 |||||| ||||||||||||||| |||||||| ||||||||||||||| ||| || Sbjct: 304 ggattggggaattgctgcaattccctctgaatagctccgattctcccgtcgaaagtcgct 363 Query: 518 ttgaaagtcttacctaaactcttccgactgaatatgagaaagcctataaaacaacgagct 577 ||| |||| ||||| ||||| || |||| ||||||| ||||||||| ||| ||||||| Sbjct: 364 ttggaagtattacccgaactcctctgactaaatatgataaagcctatggaacgacgagct 423 Query: 578 actatcatttcttcattatagattgagatc 607 |||||| ||||||||||| | ||||||||| Sbjct: 424 actatcgtttcttcattacatattgagatc 453
>gb|AY007818.1| Daucus carota NADH dehydrogenase subunit 6 (nad6) gene, nad6-N allele, complete cds; ATPase8 (atp8) gene, atp8-N allele, complete cds; chimeric ATPase9 (atp9) gene, atp9-N2 allele, complete cds; and chimeric ATPase6 (atp6) gene, atp6-N2 allele, partial cds; mitochondrial genes for mitochondrial products Length = 4474 Score = 147 bits (74), Expect = 5e-32 Identities = 98/106 (92%) Strand = Plus / Minus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 4046 tagaagctttcaacgtagacccggggacaaatctttcactcactgagaagtgaaaacctg 3987 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatt 282 |||||| ||||||||||||||||||| | ||||||||| ||||||| Sbjct: 3986 tgactagatcgtcctgaagacggatgtgacgggaagaaatggcatt 3941
>gb|AY007820.1| Daucus carota ATPase8 (ATP8) gene, ATP8-Sp1b allele, complete cds; chimeric ATPase9 (ATP9) gene, ATP9-Sp3 allele, complete cds; and chimeric ATPase6 (ATP6) gene, partial cds; mitochondrial genes for mitochondrial products Length = 4021 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Minus Query: 177 tagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacctg 236 |||||||||| |||| |||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 3607 tagaagctttcaacgcagacccggggacaaatctttcactcactgagaagtgaaaacctg 3548 Query: 237 tgactatatcgtcctgaagacggatgcggcgggaagaagtggcatt 282 |||||| ||||||||||||||||||| | ||||||||| ||||||| Sbjct: 3547 tgactagatcgtcctgaagacggatgtgacgggaagaaatggcatt 3502
>dbj|AK064562.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-C12, full insert sequence Length = 1976 Score = 131 bits (66), Expect = 3e-27 Identities = 104/114 (91%), Gaps = 2/114 (1%) Strand = Plus / Minus Query: 14 atcatttacattaggaatttcctgataaaa-agtcttatgtgtattggatccgctcttct 72 |||||||||||| |||||||| || |||| ||||||||||||||||||||||||||||| Sbjct: 208 atcatttacattcggaatttcaagagaaaagagtcttatgtgtattggatccgctcttct 149 Query: 73 gttagcatgaacacatgaatgagattcttcttattcttcctaaatagaaccccc 126 ||||||||||||||||||||||||||| | || |||||| ||||||||||||| Sbjct: 148 gttagcatgaacacatgaatgagattc-tattcctcttccaaaatagaaccccc 96
>emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa0029K06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 154442 Score = 121 bits (61), Expect = 3e-24 Identities = 61/61 (100%) Strand = Plus / Plus Query: 176 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125349 gtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaaacct 125408 Query: 236 g 236 | Sbjct: 125409 g 125409
>gb|AF082025.1|AF082025 Triticum aestivum ABC transporter CcbB (ccbB) gene, mitochondrial gene encoding mitochondrial protein, complete cds Length = 3450 Score = 109 bits (55), Expect = 1e-20 Identities = 81/91 (89%), Gaps = 9/91 (9%) Strand = Plus / Minus Query: 47 cttatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattc------- 99 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2606 cttatgtgtattggatccgctcttctgttagcatgaacacatgaatgagattctattcct 2547 Query: 100 --ttcttattcttcctaaatagaacccccca 128 | ||||||||||||||||||||||||||| Sbjct: 2546 cttccttattcttcctaaatagaacccccca 2516
>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140806 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 172 tatggtagaagctttgaacgtagacccggatacaaatctttcactcactgaaaagtgaaa 231 ||||||| |||||||||||||| |||| |||||||||||||||||||||||||||| ||| Sbjct: 22395 tatggtataagctttgaacgtaaacccagatacaaatctttcactcactgaaaagttaaa 22336 Query: 232 ac 233 || Sbjct: 22335 ac 22334
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 469 ttgctgcaattcttcctgaatagactcgattctcccgtcgagagtttcttt 519 |||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 3075784 ttgctgaaattcttcctgaatagactcgattctctcgtcaagagtttcttt 3075734
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0041E11 Length = 146335 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 469 ttgctgcaattcttcctgaatagactcgattctcccgtcgagagtttcttt 519 |||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 19572 ttgctgaaattcttcctgaatagactcgattctctcgtcaagagtttcttt 19522
>emb|CR962122.2| Medicago truncatula chromosome 5 clone mte1-46l20, COMPLETE SEQUENCE Length = 150486 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 566 aaacaacgagctactatcatttcttcattatagattgagatct 608 |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 98463 aaacaacgagctactatcatttcttcattatagattgatatct 98421
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 469 ttgctgcaattcttcctgaatagactcgattctcccgtcgagagtttcttt 519 |||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 43824 ttgctgaaattcttcctgaatagactcgattctctcgtcaagagtttcttt 43774
>emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa0030N06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146444 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 133 cacctttcttaggactatcaagccttc 159 ||||||||||||||||||||||||||| Sbjct: 146362 cacctttcttaggactatcaagccttc 146388
>dbj|AB251495.1| Physcomitrella patens mitochondrial DNA, complete genome Length = 105340 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 315 ggcataacaaagcttgcactgtcttttcgcacttaggcgcacagcg 360 ||||||||| |||||||||||||| || ||||||||| || ||||| Sbjct: 10682 ggcataacacagcttgcactgtctgtttgcacttaggtgcgcagcg 10727
>gb|AC106898.5| Homo sapiens BAC clone RP11-310K19 from 4, complete sequence Length = 171846 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttcct 36 |||||||||||||||||||| ||||||| Sbjct: 46041 aattcatcatttacattaggtatttcct 46014
>ref|NM_116124.1| Arabidopsis thaliana triacylglycerol lipase AT3G62590 mRNA, complete cds Length = 2186 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 97 ttcttcttattcttcctaaatagaacc 123 |||||||| |||||||||||||||||| Sbjct: 133 ttcttcttcttcttcctaaatagaacc 107
>gb|AC146219.2| Pan troglodytes BAC clone CH251-284M11 from Y, complete sequence Length = 144446 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 8 aaattcatcatttacattaggaatttc 34 ||||||||||||||||||||| ||||| Sbjct: 92043 aaattcatcatttacattaggtatttc 92017
>emb|AL732323.5| Human DNA sequence from clone RP11-6F6 on chromosome 9, complete sequence Length = 46786 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2 catcccaaattcatcatttacattagg 28 |||||||||| |||||||||||||||| Sbjct: 3897 catcccaaatccatcatttacattagg 3871
>emb|AL807766.4| Human DNA sequence from clone RP3-383J8 on chromosome X, complete sequence Length = 58433 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaatttc 34 ||||||||||||||||||||||| Sbjct: 25786 tcatcatttacattaggaatttc 25764
>emb|AL450332.19| Human DNA sequence from clone RP11-138M12 on chromosome 6 Contains part of a novel gene, complete sequence Length = 174678 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaatttc 34 ||||||||||||||||||||||| Sbjct: 77441 tcatcatttacattaggaatttc 77463
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9 Length = 110257 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 97 ttcttcttattcttcctaaatagaacc 123 |||||||| |||||||||||||||||| Sbjct: 3195 ttcttcttcttcttcctaaatagaacc 3221
>dbj|BS000619.1| Pan troglodytes chromosome Y clone:PTB-493L21, complete sequences Length = 161970 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 8 aaattcatcatttacattaggaatttc 34 ||||||||||||||||||||| ||||| Sbjct: 46021 aaattcatcatttacattaggtatttc 45995
>dbj|BS000603.1| Pan troglodytes chromosome Y clone:PTB-616H14, complete sequences Length = 133913 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 8 aaattcatcatttacattaggaatttc 34 ||||||||||||||||||||| ||||| Sbjct: 20408 aaattcatcatttacattaggtatttc 20382
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 8 aaattcatcatttacattaggaatttc 34 ||||||||||||||||||||| ||||| Sbjct: 22533961 aaattcatcatttacattaggtatttc 22533987 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 19659277 aattcatcatttacattagg 19659258 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 ttcatcatttacattaggaatttc 34 |||||||||||||||||| ||||| Sbjct: 15056128 ttcatcatttacattaggtatttc 15056105 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 11023242 tcatcatttacattaggaat 11023223 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 3055121 tcatcatttacattaggaat 3055102
>gb|AC008827.6| Homo sapiens chromosome 5 clone CTD-2136P21, complete sequence Length = 68144 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaatttc 34 ||||||||||||||||||||||| Sbjct: 20679 tcatcatttacattaggaatttc 20657
>gb|AY054280.1| Arabidopsis thaliana AT3g62590/F26K9_20 mRNA, complete cds Length = 2188 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 97 ttcttcttattcttcctaaatagaacc 123 |||||||| |||||||||||||||||| Sbjct: 133 ttcttcttcttcttcctaaatagaacc 107
>gb|AC006226.4|AC006226 Homo sapiens chromosome 4 clone C0011C13 map 4p16, complete sequence Length = 162349 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaatttc 34 ||||||||||||||||||||||| Sbjct: 151180 tcatcatttacattaggaatttc 151158
>gb|AC005608.1| Homo sapiens chromosome 5, PAC clone 53L17 (LBNL H152), complete sequence Length = 119298 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 30287 aattcatcatttacattaggtatttc 30312
>gb|AC004636.1| Homo sapiens chromosome 5, P1 clone 1268h6 (LBNL H50), complete sequence Length = 78293 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 25116 aattcatcatttacattaggtatttc 25141
>gb|AC158542.2| Pan troglodytes BAC clone CH251-262O17 from chromosome y, complete sequence Length = 174274 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 9507 aattcatcatttacattaggtatttc 9482
>gb|AC183290.2| Pan troglodytes BAC clone CH251-733G21 from chromosome 11, complete sequence Length = 166718 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 86300 aattcatcatttacattaggtatttc 86275
>gb|AC140113.3| Homo sapiens PAC clone RP1-85D24 from Y, complete sequence Length = 155655 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 147469 aattcatcatttacattaggtatttc 147494
>gb|AC105414.6| Homo sapiens BAC clone RP11-219L11 from 4, complete sequence Length = 43622 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 40426 aattcatcatttacattaggtatttc 40401
>emb|Z68289.1|HSU50F11 Human DNA sequence from clone LL0XNC01-50F11 on chromosome X Contains gene FLJ31916, complete sequence Length = 37628 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 37305 aattcatcatttacattaggtatttc 37280
>emb|AL627407.10| Human DNA sequence from clone RP11-496J2 on chromosome X, complete sequence Length = 110978 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 105670 aattcatcatttacattaggtatttc 105645
>emb|AL603840.9| Human DNA sequence from clone RP11-365M18 on chromosome 1 Contains part of a novel gene, complete sequence Length = 178121 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 86632 aattcatcatttacattaggtatttc 86657
>emb|AL589994.5| Human DNA sequence from clone RP4-724P12 on chromosome 6 Contains a pseudogene similar to part of myotubularin related protein 9 MTMR9, complete sequence Length = 69318 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 36946 aattcatcatttacattaggtatttc 36921
>emb|AL360219.18| Human DNA sequence from clone RP11-131L23 on chromosome 1 Contains the 3' end of a novel gene, part of the DDAH1 gene for dimethylarginine dimethylaminohydrolase 1 and a CpG island, complete sequence Length = 168953 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 124322 aattcatcatttacattaggtatttc 124297
>emb|AL359877.12| Human DNA sequence from clone RP11-179A4 on chromosome 9 Contains part of the C9orf93 gene for chromosome 9 open reading frame 93, complete sequence Length = 164008 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 14036 aattcatcatttacattaggtatttc 14011
>emb|AL390123.14| Human DNA sequence from clone RP11-566F5 on chromosome 10, complete sequence Length = 158093 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 38412 aattcatcatttacattaggtatttc 38437
>emb|AL359266.14| Human DNA sequence from clone RP11-26P21 on chromosome 13 Contains the 3' end of the DIAPH3 gene for diaphanous homolog 3 (Drosophila), complete sequence Length = 206407 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 64867 aattcatcatttacattaggtatttc 64842
>emb|AL158033.18| Human DNA sequence from clone RP3-336G18 on chromosome 6, complete sequence Length = 102282 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 17464 aattcatcatttacattaggtatttc 17489
>emb|AL139379.14| Human DNA sequence from clone RP11-358P11 on chromosome 13 Contains a CpG island, complete sequence Length = 166237 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 116310 aattcatcatttacattaggtatttc 116285
>emb|AL157713.10| Human DNA sequence from clone RP11-110J1 on chromosome 1q23.3-24.3 Contains the ETV3 gene for ets variant gene 3, a cytochrome c somatic pseudogene (HCP2), a ets variant gene 3 (ETV3) pseudogene, a keratin 8 (KRT8) pseudogene, a smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) (SMU1) pseudogene, the 5' end of the ARHGEF11 gene for Rho guanine nucleotide exchange factor (GEF) 11 and two CPG islands, complete sequence Length = 167292 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 61992 aattcatcatttacattaggcatttc 62017
>emb|AL139277.7| Human DNA sequence from clone RP11-465E19 on chromosome Xp11.1-11.23 Contains the 3' end of the RRAGB for Ras-related GTP binding B, complete sequence Length = 158591 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 32572 aattcatcatttacattaggtatttc 32597
>emb|AL133280.12| Human DNA sequence from clone RP3-514P16 on chromosome Xq21.33-22.2 Contains a protein kinase C iota (PRKCI) pseudogene, complete sequence Length = 27482 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 9004 aattcatcatttacattaggtatttc 8979
>emb|AL022098.1|HS510L9 Human DNA sequence from clone RP3-510L9 on chromosome 6p24.1-25.3 Contains part of the NEDD9 gene for neural precursor cell expressed (developmentally down-regulated) 9, complete sequence Length = 130753 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 69841 aattcatcatttacattaggtatttc 69866
>gb|AC124653.5| Homo sapiens chromosome 11, clone RP11-100H14, complete sequence Length = 151313 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 102312 aattcatcatttacattaggtatttc 102337
>emb|Z98745.1|HS29K1 Human DNA sequence from clone RP1-29K1 on chromosome 6p21.3-22.2. Contains the gene for KIAA0426 (C2H2 type zinc finger protein), the gene for a novel C2H2 type zinc finger protein, a COX11 (COX11 (yeast) homolog, cytochrome c oxidase assembly protein) pseudogene, the olfactory receptor 2E1 pseudogene OR2E1P, the 3' end of a glutathion peroxidase pseudogene, ESTs, STSs, GSS and three CpG islands, complete sequence Length = 128779 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 22571 aattcatcatttacattaggtatttc 22596
>gb|AC021956.8| Homo sapiens chromosome 11, clone RP11-447I3, complete sequence Length = 197864 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 53745 aattcatcatttacattaggtatttc 53720
>gb|AC022994.9| Homo sapiens chromosome 11, clone RP11-735P2, complete sequence Length = 167760 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 146862 aattcatcatttacattaggtatttc 146837
>gb|AC068672.11| Homo sapiens chromosome 8, clone RP11-566H8, complete sequence Length = 199583 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 167211 aattcatcatttacattaggtatttc 167236
>gb|AC090092.9| Homo sapiens chromosome 11, clone RP11-266A24, complete sequence Length = 101116 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 20299 aattcatcatttacattaggtatttc 20274
>gb|AC107979.7| Homo sapiens chromosome 15, clone CTD-3049M7, complete sequence Length = 148290 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 65985 aattcatcatttacattaggtatttc 66010
>gb|AC117522.2| Homo sapiens chromosome 5 clone RP11-1072N2, complete sequence Length = 170219 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 133465 aattcatcatttacattaggtatttc 133440
>gb|DP000056.1| Pan troglodytes chromosome Y chry_random_3 genomic scaffold Length = 331329 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 12059 aattcatcatttacattaggtatttc 12084
>gb|AC110057.3| Homo sapiens chromosome 11, clone CTD1-2361F20, complete sequence Length = 168473 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 128263 aattcatcatttacattaggtatttc 128238
>gb|AC069544.9| Homo sapiens chromosome 10 clone RP11-398C13, complete sequence Length = 214866 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 34185 aattcatcatttacattaggtatttc 34210
>gb|AC023442.17| Homo sapiens chromosome 11, clone RP11-375D13, complete sequence Length = 177644 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 162591 aattcatcatttacattaggtatttc 162566
>gb|AC114942.2| Homo sapiens chromosome 5 clone CTD-2327J4, complete sequence Length = 118067 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 25967 aattcatcatttacattaggtatttc 25942
>gb|AC094098.4| Homo sapiens chromosome 5 clone RP11-141F7, complete sequence Length = 138425 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 43390 aattcatcatttacattaggtatttc 43415
>gb|AC109448.3| Homo sapiens chromosome 5 clone RP11-141G2, complete sequence Length = 163817 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 29200 aattcatcatttacattaggtatttc 29225
>gb|AC095065.3| Homo sapiens BAC clone RP11-648P3 from 4, complete sequence Length = 100468 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 43584 aattcatcatttacattaggtatttc 43559
>gb|AC090762.9| Homo sapiens chromosome 15, clone RP11-387E8, complete sequence Length = 192826 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 172423 aattcatcatttacattaggtatttc 172448
>gb|AC092807.2| Homo sapiens chromosome 1 clone RP11-290M5, complete sequence Length = 180574 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 20124 aattcatcatttacattaggtatttc 20099
>gb|AC023206.6| Homo sapiens chromosome 11, clone RP11-797J4, complete sequence Length = 208561 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 206781 aattcatcatttacattaggtatttc 206806
>ref|NG_002351.1| Homo sapiens sorting nexin 7 pseudogene (LOC203930) on chromosome 11 Length = 2936 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 1670 aattcatcatttacattaggtatttc 1645
>gb|AC096651.1| Homo sapiens BAC clone RP11-16J15 from 4, complete sequence Length = 158661 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 141045 aattcatcatttacattaggtatttc 141020
>gb|AC115222.3| Homo sapiens BAC clone RP11-48F23 from 4, complete sequence Length = 127707 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 122653 aattcatcatttacattaggtatttc 122628
>gb|AC021989.8| Homo sapiens BAC clone RP11-92H22 from 4, complete sequence Length = 154413 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 129829 aattcatcatttacattaggtatttc 129854
>gb|AC011242.8| Homo sapiens BAC clone RP11-489K22 from 2, complete sequence Length = 186091 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 45677 aattcatcatttacattaggtatttc 45652
>gb|AC005678.1|AC005678 Homo sapiens PAC clone RP11-569I24 from 7, complete sequence Length = 187543 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 67596 aattcatcatttacattaggtatttc 67621
>gb|AC007247.5|AC007247 Homo sapiens BAC clone RP11-305H21 from Y, complete sequence Length = 116788 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 92408 aattcatcatttacattaggtatttc 92383
>gb|AC017020.4|AC017020 Homo sapiens BAC clone RP11-185K15 from Y, complete sequence Length = 166403 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 146172 aattcatcatttacattaggtatttc 146197
>gb|AC011997.8| Homo sapiens BAC clone RP11-294E24 from 2, complete sequence Length = 186315 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 65885 aattcatcatttacattaggtatttc 65910
>gb|AC009533.10| Homo sapiens 12 BAC RP11-22B23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162572 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 26660 aattcatcatttacattaggcatttc 26635
>gb|AC129501.3| Homo sapiens chromosome 11, clone RP11-1095K7, complete sequence Length = 179540 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 102309 aattcatcatttacattaggtatttc 102334
>dbj|AP006587.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-163O19, complete sequence Length = 172438 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 154810 aattcatcatttacattaggtatttc 154835
>gb|AC005157.1|AC005157 Homo sapiens PAC clone RP5-1108A12 from 14q24.3, complete sequence Length = 164275 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 108443 aattcatcatttacattaggtatttc 108418
>gb|AC009227.3|AC009227 Homo sapiens BAC clone RP11-187G20 from 2, complete sequence Length = 174149 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 99957 aattcatcatttacattaggtatttc 99982
>emb|AL049775.2|CNS00006 Human chromosome 14 DNA sequence BAC R-497E19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 181433 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 53823 aattcatcatttacattaggtatttc 53798
>emb|AL139316.5|CNS01DXH Human chromosome 14 DNA sequence BAC R-698F20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192440 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 110519 aattcatcatttacattaggtatttc 110544
>dbj|AP002353.4| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2651C21, complete sequence Length = 202607 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 75262 aattcatcatttacattaggtatttc 75287
>dbj|AP001690.1| Homo sapiens genomic DNA, chromosome 21q, section 34/105 Length = 340000 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 20436 aattcatcatttacattaggtatttc 20411
>dbj|AP000469.3| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-132H24, complete sequence Length = 136804 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 42553 aattcatcatttacattaggtatttc 42528
>gb|AC090159.12| Homo sapiens chromosome 11, clone RP11-406D1, complete sequence Length = 173557 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 15783 aattcatcatttacattaggtatttc 15808
>dbj|AP000461.1| Homo sapiens genomic DNA, chromosome 21q21.2, clone:f15D6, complete sequence Length = 22325 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aattcatcatttacattaggaatttc 34 |||||||||||||||||||| ||||| Sbjct: 7025 aattcatcatttacattaggtatttc 7050
>gb|AC140139.2| Homo sapiens chromosome 5 clone RP11-1417I21, complete sequence Length = 216245 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 160227 tcatcatttacattaggtatttcct 160251
>gb|AC139776.2| Homo sapiens chromosome 5 clone RP11-1005E12, complete sequence Length = 217545 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 165403 tcatcatttacattaggtatttcct 165379
>gb|AC139495.2| Homo sapiens chromosome 5 clone RP11-848G14, complete sequence Length = 185911 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 159010 tcatcatttacattaggtatttcct 159034
>gb|AC139272.3| Homo sapiens chromosome 5 clone RP11-589F5, complete sequence Length = 179723 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 132009 tcatcatttacattaggtatttcct 132033
>gb|AC145034.2| Homo sapiens chromosome 5 clone RP11-1414O21, complete sequence Length = 210205 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 126542 tcatcatttacattaggtatttcct 126566
>gb|AC139505.2| Homo sapiens chromosome 5 clone RP11-910M8, complete sequence Length = 202970 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 32348 tcatcatttacattaggtatttcct 32324
>gb|AC145141.2| Homo sapiens chromosome 5 clone RP11-1364K7, complete sequence Length = 163257 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 55813 tcatcatttacattaggtatttcct 55837
>gb|AC145144.2| Homo sapiens chromosome 5 clone RP11-1432L1, complete sequence Length = 211638 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 3434 tcatcatttacattaggtatttcct 3410
>emb|AL161444.18| Human DNA sequence from clone RP11-312C2 on chromosome 9, complete sequence Length = 150563 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 79987 tcatcatttacattaggtatttcct 80011
>gb|AC139463.2| Homo sapiens chromosome 5 clone RPCI-11_1264N5, complete sequence Length = 202179 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 107526 tcatcatttacattaggtatttcct 107550
>gb|AC138911.2| Homo sapiens chromosome 5 clone RP11-618O22, complete sequence Length = 191992 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 188210 tcatcatttacattaggtatttcct 188234
>gb|AC139492.2| Homo sapiens chromosome 5 clone RP11-842C12, complete sequence Length = 184826 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 79340 tcatcatttacattaggtatttcct 79364
>emb|AL009030.15|HS28I24 Human DNA sequence from clone RP1-28I24 on chromosome 5 Contains the 5' end of the spinal muscular dystrophy region gene (SMA3), two beta-glucuronidase pseudogenes and two novel pseudogenes containing four membrane protein-like protein repeats, one CpG islands, ESTs, GSSs and STSs, complete sequence Length = 222252 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 169769 tcatcatttacattaggtatttcct 169745
>gb|AC182492.2| Pan troglodytes BAC clone CH251-294F23 from chromosome 5, complete sequence Length = 179551 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 9849 tcatcatttacattaggtatttcct 9825
>gb|AC139500.2| Homo sapiens chromosome 5 clone RP11-864E4, complete sequence Length = 194350 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 186262 tcatcatttacattaggtatttcct 186238
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 282 ttagaagtgttgctgactttacatt 306 |||||| |||||||||||||||||| Sbjct: 15968382 ttagaaatgttgctgactttacatt 15968358
>gb|AC138850.2| Homo sapiens chromosome 5 clone RP11-1308P14, complete sequence Length = 188885 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 153216 tcatcatttacattaggtatttcct 153192
>gb|AC140175.2| Homo sapiens chromosome 5 clone RP11-833G1, complete sequence Length = 161671 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 157889 tcatcatttacattaggtatttcct 157913
>gb|AC108108.2| Homo sapiens chromosome 5 clone RP11-260M21, complete sequence Length = 173597 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 126595 tcatcatttacattaggtatttcct 126619
>gb|AC108106.4| Homo sapiens chromosome 5 clone RP11-214M1, complete sequence Length = 160701 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaatttcct 36 ||||||||||||||||| ||||||| Sbjct: 8417 tcatcatttacattaggtatttcct 8441
>gb|AC106776.4| Homo sapiens chromosome 5 clone RP11-325M13, complete sequence Length = 114419 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 atcatttacattaggaatttc 34 ||||||||||||||||||||| Sbjct: 56489 atcatttacattaggaatttc 56469
>dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_F01 Length = 120026 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 282 ttagaagtgttgctgactttacatt 306 |||||| |||||||||||||||||| Sbjct: 112057 ttagaaatgttgctgactttacatt 112033
>emb|CT573502.2| Medicago truncatula chromosome 5 clone mte1-69f21, COMPLETE SEQUENCE Length = 89977 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 570 aacgagctactatcatttctt 590 ||||||||||||||||||||| Sbjct: 19282 aacgagctactatcatttctt 19302
>gb|AC183762.2| Pan troglodytes BAC clone CH251-684C16 from chromosome 2, complete sequence Length = 139973 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 55617 tcatcatttacattaggaat 55598
>gb|AC183595.3| Pan troglodytes BAC clone CH251-641G8 from chromosome 2, complete sequence Length = 211457 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 70787 tcatcatttacattaggaat 70806
>gb|AC121275.20| Mus musculus chromosome 8, clone RP24-234C3, complete sequence Length = 158075 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 atacaaatctttcactcact 220 |||||||||||||||||||| Sbjct: 127829 atacaaatctttcactcact 127810
>gb|AC006366.4| Homo sapiens BAC clone RP11-86G22 from Y, complete sequence Length = 166458 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 102535 tcatcatttacattaggaat 102554
>gb|AC147669.4| Pan troglodytes BAC clone CH251-71E10 from Y, complete sequence Length = 151872 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 93495 tcatcatttacattaggaat 93514
>gb|AC147664.2| Pan troglodytes BAC clone CH251-238C14 from Y, complete sequence Length = 159873 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 156247 tcatcatttacattaggaat 156266
>gb|AC146230.2| Pan troglodytes BAC clone CH251-228B19 from Y, complete sequence Length = 179896 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 10450 tcatcatttacattaggaat 10469
>gb|AC147110.2| Pan troglodytes BAC clone CH251-565H17 from Y, complete sequence Length = 174678 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 ttcatcatttacattaggaatttc 34 |||||||||||||||||| ||||| Sbjct: 129854 ttcatcatttacattaggtatttc 129877
>gb|AC146382.4| Pan troglodytes BAC clone RP43-112E23 from 7, complete sequence Length = 181957 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 150836 aattcatcatttacattagg 150817
>gb|AC183765.3| Pan troglodytes BAC clone CH251-521I2 from chromosome 2, complete sequence Length = 179528 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 133171 tcatcatttacattaggaat 133152
>gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromosome 2, complete sequence Length = 192494 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 168353 tcatcatttacattaggaat 168372
>gb|AF254983.3| Homo sapiens chromosome 21 clone RP11-589M2 map p11-q21.1, complete sequence Length = 190711 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 1439 aattcatcatttacattagg 1420
>gb|AC146459.3| Pan troglodytes BAC clone CH251-229E22 from Y, complete sequence Length = 191428 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 ttcatcatttacattaggaatttc 34 |||||||||||||||||| ||||| Sbjct: 151664 ttcatcatttacattaggtatttc 151641
>gb|AC146182.3| Pan troglodytes BAC clone CH251-540L24 from Y, complete sequence Length = 251472 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 105743 aattcatcatttacattagg 105724
>gb|AC141479.3| Mus musculus BAC clone RP23-281N15 from chromosome 12, complete sequence Length = 190974 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ttctgttagcatgaacacat 88 |||||||||||||||||||| Sbjct: 53629 ttctgttagcatgaacacat 53610
>gb|AC146243.2| Pan troglodytes BAC clone CH251-166E5 from Y, complete sequence Length = 161714 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 159837 tcatcatttacattaggaat 159856
>gb|AC116471.8| Mus musculus chromosome 12, clone RP23-384N3, complete sequence Length = 240876 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ttctgttagcatgaacacat 88 |||||||||||||||||||| Sbjct: 55398 ttctgttagcatgaacacat 55417
>gb|AC100120.9| Mus musculus chromosome 10, clone RP23-40I1, complete sequence Length = 236895 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 ccccccaccctcacctttcttagg 145 |||| ||||||||||||||||||| Sbjct: 176007 ccccacaccctcacctttcttagg 175984
>gb|AC144510.1| Pan troglodytes BAC clone RP43-18C13 from 7, complete sequence Length = 161048 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 71860 aattcatcatttacattagg 71841
>gb|AC125480.33| Medicago truncatula clone mth2-8c24, complete sequence Length = 119718 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 ctactatcatttcttcatta 595 |||||||||||||||||||| Sbjct: 105950 ctactatcatttcttcatta 105931
>gb|AC142346.1| Pan troglodytes BAC clone RP43-2A2 from Y, complete sequence Length = 162911 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 93490 tcatcatttacattaggaat 93509
>gb|AC142332.1| Pan troglodytes BAC clone RP43-31L22 from Y, complete sequence Length = 153093 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 1878 tcatcatttacattaggaat 1859
>emb|Z84475.1|HS162C6 Human DNA sequence from clone RP1-162C6 on chromosome 6q21, complete sequence Length = 91017 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 22426 aattcatcatttacattagg 22407
>emb|AL954650.8| Human DNA sequence from clone RP11-523M19 on chromosome 1, complete sequence Length = 86257 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 16418 aattcatcatttacattagg 16437
>emb|AL592526.11| Human DNA sequence from clone RP11-89O18 on chromosome 1, complete sequence Length = 21111 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ggaagaagtggcatttagaa 287 |||||||||||||||||||| Sbjct: 8812 ggaagaagtggcatttagaa 8793
>emb|AL592293.7| Human DNA sequence from clone RP11-54D18 on chromosome 9 Contains a lactate dehdrogenase A (LDHA) (LOC158222) pseudogene, a novel pseudogene (FLJ20543), a pseudogene similar to part of chloride channel 3 (CLCN3) (CLC3), a pseudogene similar to part of PC4 and SFRS1 interacting protein 2 (PSIP2) and a CpG island, complete sequence Length = 157574 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 tcatcatttacattaggaatttcc 35 ||||||||||||||||| |||||| Sbjct: 89930 tcatcatttacattaggtatttcc 89953
>emb|AL590139.11| Human DNA sequence from clone RP11-349N19 on chromosome X Contains the 3' end of the GRIA3 gene for glutamate receptor ionotrophic AMPA 3 and a H3 histone, family 3B (H3.3B) (H3F3B) pseudogene, complete sequence Length = 75359 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 39889 aattcatcatttacattagg 39870
>emb|AL590425.10| Human DNA sequence from clone RP11-102N5 on chromosome X Contains the gene for a novel protein and three CpG islands, complete sequence Length = 63771 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 28262 tcatcatttacattaggaat 28243
>emb|AL359893.16| Human DNA sequence from clone RP11-35N6 on chromosome 9 Contains the 3' end of a novel gene (FLJ20300), a bile acid Coenzyme A amino acid N-acyltransferase (BAAT) pseudogene, a RINZF zinc finger protein pseudogene, the BAAT gene for bile acid Coenzyme A amino acid N-acyltransferase (glycine N-choloyltransferase) and two novel pseudogenes, complete sequence Length = 146627 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 36498 aattcatcatttacattagg 36479
>emb|AL359378.12| Human DNA sequence from clone RP11-203H2 on chromosome 6 Contains part of a novel gene and the 3' end of a novel gene, complete sequence Length = 100919 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaatttcc 35 ||||||||||||||||| |||||| Sbjct: 58493 tcatcatttacattaggtatttcc 58470
>emb|AL359394.9| Human DNA sequence from clone RP11-264M20 on chromosome 13 Contains a novel pseudogene, complete sequence Length = 137246 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 125651 aattcatcatttacattagg 125670
>emb|AL354992.7| Human DNA sequence from clone RP11-293A1 on chromosome 9, complete sequence Length = 173911 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 152307 aattcatcatttacattagg 152288
>emb|AL355272.3| Human DNA sequence from clone RP5-955L16 on chromosome 6 contains the gene for a novel RFX DNA binding domain containing protein and a CpG island, complete sequence Length = 105463 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 tctttcactcactgaaaagtgaaa 231 |||||| ||||||||||||||||| Sbjct: 54850 tctttccctcactgaaaagtgaaa 54873
>emb|AL353753.6| Human DNA sequence from clone RP11-477G9 on chromosome 9, complete sequence Length = 178965 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 68264 aattcatcatttacattagg 68245
>emb|AL157696.27| Human DNA sequence from clone RP11-454P4 on chromosome 13, complete sequence Length = 84231 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 11397 aattcatcatttacattagg 11416
>emb|AL157393.21| Human DNA sequence from clone RP11-31A20 on chromosome 10, complete sequence Length = 138235 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 72231 aattcatcatttacattagg 72212
>emb|AL157934.17| Human DNA sequence from clone RP11-449M9 on chromosome Xq13.1-13.3 Contains the 3' end of the SLC16A2 gene for solute carrier family 16 member 2 and two CpG islands, complete sequence Length = 106497 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 27027 aattcatcatttacattagg 27008
>emb|AL157886.13| Human DNA sequence from clone RP11-59M22 on chromosome 9q21.31-21.33, complete sequence Length = 156956 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 154436 aattcatcatttacattagg 154455
>emb|AL138900.12| Human DNA sequence from clone RP11-85G21 on chromosome 1 Contains a novel gene, complete sequence Length = 182025 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaatttcc 35 ||||||||||||||||| |||||| Sbjct: 109739 tcatcatttacattaggtatttcc 109716
>gb|AF542203.1| Zea mays cytochrome c oxidase subunit I (COI) gene, complete cds; and unknown genes; mitochondrial genes for mitochondrial products Length = 4768 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 gaagtggcatttagaagtgttgct 295 ||||||||||| |||||||||||| Sbjct: 1121 gaagtggcattgagaagtgttgct 1144
>emb|AL136132.15| Human DNA sequence from clone RP11-141M24 on chromosome 13q33.1-34 Contains part of a novel gene, possible ortholog of rat myosin heavy chain Myr 8 (Loc192253), complete sequence Length = 173738 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 11550 aattcatcatttacattagg 11531
>emb|AL078591.18|HSDJ198I9 Human DNA sequence from clone RP1-198I9 on chromosome 6q12-13 Contains the 3' end of a novel gene (KIAA1411, FLJ20176, FLJ11049), complete sequence Length = 144649 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 36323 aattcatcatttacattagg 36342
>emb|AL034400.2|HS198C21 Human DNA sequence from clone RP6-198C21 on chromosome Xq26.1-26.3 Contains the 3' end of the GPC4 gene for glypican 4, complete sequence Length = 141762 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 cccccaccctcacctttctt 142 |||||||||||||||||||| Sbjct: 35702 cccccaccctcacctttctt 35683
>emb|AL031592.1|HS366B10 Human DNA sequence from clone CTA-366B10 on chromosome 22q12.2-12.3 Contains GSSs, complete sequence Length = 26316 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 2865 aattcatcatttacattagg 2846
>emb|CR936218.6| Human DNA sequence from clone RP11-669E14, complete sequence Length = 213739 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 138379 aattcatcatttacattagg 138360
>gb|AC119044.6| Homo sapiens 12 BAC RP11-23J18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 108899 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 22075 aattcatcatttacattagg 22094
>emb|X02660.1|MICOXI Maize mitochondrial gene for cytochrome c oxidase subunit I (COX I) Length = 2149 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 gaagtggcatttagaagtgttgct 295 ||||||||||| |||||||||||| Sbjct: 2134 gaagtggcattgagaagtgttgct 2111
>emb|AL670008.1|NCB13O8 Neurospora crassa DNA linkage group V BAC contig B13O8 Length = 80765 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 caagctgatcctaagtaatcgttg 423 |||||||||||||||||| ||||| Sbjct: 17656 caagctgatcctaagtaagcgttg 17633
>emb|AL163201.2|HS21C001 Homo sapiens chromosome 21 segment HS21C001 Length = 281116 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 49996 aattcatcatttacattagg 49977
>emb|AL049607.1|ATF11C18 Arabidopsis thaliana DNA chromosome 4, BAC clone F11C18 (ESSA project) Length = 111517 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gattcttcttattcttccta 114 |||||||||||||||||||| Sbjct: 85163 gattcttcttattcttccta 85144
>emb|AL021636.3|ATF10N7 Arabidopsis thaliana DNA chromosome 4, BAC clone F10N7 (ESSA project) Length = 96585 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gattcttcttattcttccta 114 |||||||||||||||||||| Sbjct: 80692 gattcttcttattcttccta 80711
>emb|CR932417.12| Human DNA sequence from clone XX-D_24I13, complete sequence Length = 198202 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 93469 aattcatcatttacattagg 93450
>emb|AL662909.9| Mouse DNA sequence from clone RP23-189I13 on chromosome 11 Contains the 5' end of the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila) and a CpG island, complete sequence Length = 201564 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 cactcactgaaaagtgaaaa 232 |||||||||||||||||||| Sbjct: 133187 cactcactgaaaagtgaaaa 133168
>gb|AC105039.9| Homo sapiens chromosome 18, clone CTD-2357J19, complete sequence Length = 133591 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 33393 aattcatcatttacattagg 33374
>gb|AC116158.5| Homo sapiens chromosome , clone RP11-102L12, complete sequence Length = 159236 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 7119 aattcatcatttacattagg 7138
>gb|AC005185.1| Homo sapiens Xp22 BAC GSHB-383H3 (Genome Systems Human BAC Library) complete sequence Length = 124351 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 99314 aattcatcatttacattagg 99333
>gb|AC025035.15| Homo sapiens 12 BAC RP11-121E16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165440 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaatttcc 35 ||||||||||||||||| |||||| Sbjct: 80580 tcatcatttacattaggtatttcc 80557
>gb|AC012229.8| Homo sapiens chromosome 15, clone RP11-182L7, complete sequence Length = 119723 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 tgactttacatttaggtttc 314 |||||||||||||||||||| Sbjct: 13593 tgactttacatttaggtttc 13574
>gb|AC024451.8| Homo sapiens chromosome 11, clone RP11-697N18, complete sequence Length = 159791 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 74124 aattcatcatttacattagg 74143
>dbj|BS000636.2| Pan troglodytes chromosome Y clone: PTBY-004L13, complete sequence Length = 154362 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 73025 aattcatcatttacattagg 73044
>dbj|BS000617.1| Pan troglodytes chromosome Y clone:PTB-206A19, complete sequences Length = 169081 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 ttcatcatttacattaggaatttc 34 |||||||||||||||||| ||||| Sbjct: 31054 ttcatcatttacattaggtatttc 31077
>dbj|BS000555.1| Pan troglodytes chromosome Y clone:PTB-439G17, complete sequences Length = 160463 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 ttcatcatttacattaggaatttc 34 |||||||||||||||||| ||||| Sbjct: 67442 ttcatcatttacattaggtatttc 67465
>gb|AC018525.8| Homo sapiens chromosome 8, clone RP11-3J13, complete sequence Length = 150052 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 133457 aattcatcatttacattagg 133476
>gb|AC103853.2| Homo sapiens chromosome 8, clone RP11-642D21, complete sequence Length = 178736 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 113913 aattcatcatttacattagg 113894
>gb|AC099671.2| Homo sapiens chromosome 1 clone RP11-466L22, complete sequence Length = 153934 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 76214 aattcatcatttacattagg 76233
>gb|AC151458.27| Medicago truncatula clone mth2-105a19, complete sequence Length = 109617 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ctactatcatttcttcatta 595 |||||||||||||||||||| Sbjct: 96580 ctactatcatttcttcatta 96599
>gb|AC079638.3| Genomic sequence for Mus musculus, clone RP23-274A20, complete sequence Length = 162721 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 tatcatttcttcattataga 599 |||||||||||||||||||| Sbjct: 117360 tatcatttcttcattataga 117341
>gb|AC109631.4| Homo sapiens chromosome , clone RP11-9J12, complete sequence Length = 172321 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 93484 aattcatcatttacattagg 93465
>gb|AC024599.9| Homo sapiens chromosome 10 clone RP11-159H3, complete sequence Length = 173391 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 153071 aattcatcatttacattagg 153090
>gb|AC083790.7| Homo sapiens chromosome 8, clone RP11-46B18, complete sequence Length = 98300 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 90337 aattcatcatttacattagg 90318
>gb|AC079950.23| Homo sapiens 12q BAC RP11-575A21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 135123 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaatttcctgat 39 ||||||||||||||||| || ||||||| Sbjct: 38742 tcatcatttacattaggtatctcctgat 38715
>gb|AC096922.2| Homo sapiens chromosome 3 clone RP11-436J20, complete sequence Length = 218652 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 42712 tcatcatttacattaggaat 42693
>gb|AC025159.28| Homo sapiens 12 BAC RP11-1082K22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 209961 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 138357 aattcatcatttacattagg 138376
>gb|AC091628.2| Homo sapiens chromosome 17 map 17q21.1, complete sequence Length = 201397 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 70106 aattcatcatttacattagg 70125
>gb|AC064800.8| Homo sapiens chromosome 18, clone CTD-2001I24, complete sequence Length = 131409 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tcatttacattaggaatttc 34 |||||||||||||||||||| Sbjct: 91806 tcatttacattaggaatttc 91825
>gb|AC026639.6| Homo sapiens chromosome 11, clone RP11-4B7, complete sequence Length = 174711 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tcatttacattaggaatttc 34 |||||||||||||||||||| Sbjct: 35842 tcatttacattaggaatttc 35823
>gb|AC009522.11| Homo sapiens 12 BAC RP11-591N1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 128666 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tcatttacattaggaatttc 34 |||||||||||||||||||| Sbjct: 57630 tcatttacattaggaatttc 57649
>gb|AC102011.9| Mus musculus chromosome 5, clone RP24-536B19, complete sequence Length = 142377 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 aaagtcttatgtgtattgga 61 |||||||||||||||||||| Sbjct: 5061 aaagtcttatgtgtattgga 5042
>gb|AC158335.1| Homo sapiens chromosome 3 clone WI2-3777M4, complete sequence Length = 43533 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcatcatttacattaggaat 31 |||||||||||||||||||| Sbjct: 6941 tcatcatttacattaggaat 6922
>gb|AC020692.5|AC020692 Homo sapiens chromosome 8, clone RP11-544H16, complete sequence Length = 168242 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 117189 aattcatcatttacattagg 117208
>gb|AC024942.18|AC024942 Homo sapiens 12 BAC RP11-1115M13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146120 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 119493 aattcatcatttacattagg 119512
>gb|AC008282.4| Homo sapiens BAC clone RP11-516B14 from 2, complete sequence Length = 203241 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 53784 aattcatcatttacattagg 53765
>gb|AC073225.5| Homo sapiens BAC clone RP11-611G1 from 2, complete sequence Length = 153688 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 82273 aattcatcatttacattagg 82292
>gb|AC007251.4| Homo sapiens BAC clone RP11-373G23 from 2, complete sequence Length = 180964 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 169995 aattcatcatttacattagg 169976
>gb|AC006560.8| Homo sapiens 12 BAC RPCI11-792F18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 202478 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 catcatttacattaggaatt 32 |||||||||||||||||||| Sbjct: 144768 catcatttacattaggaatt 144749
>gb|AC007539.8| Homo sapiens 12 BAC RCPI11-935C2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177147 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 catcatttacattaggaatt 32 |||||||||||||||||||| Sbjct: 19398 catcatttacattaggaatt 19379
>gb|AC006462.3|AC006462 Homo sapiens BAC clone RP11-389B19 from Y, complete sequence Length = 139994 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 59375 aattcatcatttacattagg 59394
>gb|AC023881.6| Homo sapiens BAC clone RP11-108C2 from 2, complete sequence Length = 185802 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aattcatcatttacattagg 28 |||||||||||||||||||| Sbjct: 26076 aattcatcatttacattagg 26095 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,405,373 Number of Sequences: 3902068 Number of extensions: 5405373 Number of successful extensions: 119494 Number of sequences better than 10.0: 279 Number of HSP's better than 10.0 without gapping: 284 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118290 Number of HSP's gapped (non-prelim): 1187 length of query: 608 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 585 effective length of database: 17,143,297,704 effective search space: 10028829156840 effective search space used: 10028829156840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
