ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7e16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466219.1| Oryza sativa (japonica cultivar-group), mRNA 280 5e-72
2dbj|AK068385.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 5e-72
3gb|BT017369.1| Zea mays clone EL01N0324H03.c mRNA sequence 182 9e-43
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
5dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
6gb|AY109813.1| Zea mays CL4777_1 mRNA sequence 98 4e-17
7gb|BT017593.1| Zea mays clone EL01N0430H01.c mRNA sequence 50 0.008
8gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 46 0.13
9gb|AC118688.10| Mus musculus chromosome 5, clone RP23-302F24, co... 44 0.52
10gb|AC123558.5| Mus musculus BAC clone RP23-336N16 from chromosom... 44 0.52
11dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 44 0.52
12gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.52
13ref|XM_743999.1| Aspergillus fumigatus Af293 integral peroxisoma... 42 2.0
14gb|AC117199.3| Mus musculus BAC clone RP23-134L22 from 10, compl... 42 2.0
15gb|AC162908.4| Mus musculus BAC clone RP24-296A15 from chromosom... 42 2.0
16dbj|AK086631.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 42 2.0
17dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
18dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 2.0
19dbj|AP006857.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
20dbj|AP005488.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
21gb|BT016822.1| Zea mays clone Contig655 mRNA sequence 40 8.1
22gb|AC150162.1| Solanum demissum chromosome 5 clone PGEC160O2 map... 40 8.1
23gb|AY704421.1| Gossypium anomalum clone 9G pathogenesis-related ... 40 8.1
24gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 geno... 40 8.1
25gb|AC140468.2| Mus musculus BAC clone RP24-394C15 from chromosom... 40 8.1
26gb|AC131107.3| Mus musculus BAC clone RP23-339P15 from chromosom... 40 8.1
27gb|AC105166.16| Mus musculus chromosome 5, clone RP24-311D15, co... 40 8.1
28gb|AC161600.6| Mus musculus BAC clone RP23-350K3 from chromosome... 40 8.1
29ref|XM_382838.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 8.1
30gb|AC092068.2| Homo sapiens chromosome 19 clone CTC-265F19, comp... 40 8.1
31gb|AC007437.16| Homo sapiens 12q22 BAC RPCI11-541G9 (Roswell Par... 40 8.1
32dbj|AK054105.1| Mus musculus 2 days pregnant adult female oviduc... 40 8.1
33gb|AC157998.2| Mus musculus BAC clone RP23-27L18 from chromosome... 40 8.1
34ref|XM_321730.2| Anopheles gambiae str. PEST ENSANGP00000016819 ... 40 8.1
35gb|AY104803.1| Zea mays PCO064157 mRNA sequence 40 8.1
36gb|AC006275.1|AC006275 Homo sapiens chromosome 19, cosmid R32203... 40 8.1
37emb|AL450023.21| Human DNA sequence from clone RP11-552J9 on chr... 40 8.1
38gb|AC151997.2| Mus musculus BAC clone RP23-138O21 from 8, comple... 40 8.1
39emb|AL121766.5|CNS01DSA Human chromosome 14 DNA sequence BAC R-4... 40 8.1 
>ref|XM_466219.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1187

 Score =  280 bits (141), Expect = 5e-72
 Identities = 297/349 (85%)
 Strand = Plus / Minus

                                                                       
Query: 241 cggaactcctcgttttcctcctgggccctctcgagcctctccttgagcttgcggatctcc 300
           ||||| ||||| ||||| |  |||||| ||||||| | ||  ||||||||||||||||||
Sbjct: 973 cggaattcctcattttcttgttgggccttctcgaggcgctttttgagcttgcggatctcc 914

                                                                       
Query: 301 tcgtcggatttcaccctggcctctgccgccaccctctctgcttctagccttgcattctgt 360
           || || |||   | ||| || || || |||| ||||||||||||||||||||||||||||
Sbjct: 913 tcatctgatcggagcctagcttcagctgccaacctctctgcttctagccttgcattctgt 854

                                                                       
Query: 361 tcttccatgagctgaacttgcagcttctccaccgtgatattcagcttttcctccaccatg 420
           ||||||||||| ||   ||||||||| || || |||||||||||||||||||||||||||
Sbjct: 853 tcttccatgagttgctgttgcagcttgtcaacagtgatattcagcttttcctccaccatg 794

                                                                       
Query: 421 gcagtaatgtttgcaagctgttcatcccgagttctgtggatctccttcttcaattcagtt 480
              |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |
Sbjct: 793 ttggtaatgtttgcaagctgttcatcccgagttctctggatctcctttttcaattcagat 734

                                                                       
Query: 481 atctggtcctctgaatatcccatagcatcatgaacctccatttctctatcatgcacctcc 540
           || || || |||| |||||| ||||||||||| ||||||  ||||||  ||||  | |||
Sbjct: 733 atttgctcttctgtatatccaatagcatcatgcacctcctgttctctggcatgtgcttcc 674

                                                            
Query: 541 ttaaggcgagtgagcatttgatctgtaaatgggtttcctccattatttg 589
           |||| || || |||||||||||||| |||||| ||||||||||||||||
Sbjct: 673 ttaatgcaagcgagcatttgatctgaaaatggctttcctccattatttg 625
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>dbj|AK068385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146D08, full
            insert sequence
          Length = 1307

 Score =  280 bits (141), Expect = 5e-72
 Identities = 297/349 (85%)
 Strand = Plus / Minus

                                                                        
Query: 241  cggaactcctcgttttcctcctgggccctctcgagcctctccttgagcttgcggatctcc 300
            ||||| ||||| ||||| |  |||||| ||||||| | ||  ||||||||||||||||||
Sbjct: 1093 cggaattcctcattttcttgttgggccttctcgaggcgctttttgagcttgcggatctcc 1034

                                                                        
Query: 301  tcgtcggatttcaccctggcctctgccgccaccctctctgcttctagccttgcattctgt 360
            || || |||   | ||| || || || |||| ||||||||||||||||||||||||||||
Sbjct: 1033 tcatctgatcggagcctagcttcagctgccaacctctctgcttctagccttgcattctgt 974

                                                                        
Query: 361  tcttccatgagctgaacttgcagcttctccaccgtgatattcagcttttcctccaccatg 420
            ||||||||||| ||   ||||||||| || || |||||||||||||||||||||||||||
Sbjct: 973  tcttccatgagttgctgttgcagcttgtcaacagtgatattcagcttttcctccaccatg 914

                                                                        
Query: 421  gcagtaatgtttgcaagctgttcatcccgagttctgtggatctccttcttcaattcagtt 480
               |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |
Sbjct: 913  ttggtaatgtttgcaagctgttcatcccgagttctctggatctcctttttcaattcagat 854

                                                                        
Query: 481  atctggtcctctgaatatcccatagcatcatgaacctccatttctctatcatgcacctcc 540
            || || || |||| |||||| ||||||||||| ||||||  ||||||  ||||  | |||
Sbjct: 853  atttgctcttctgtatatccaatagcatcatgcacctcctgttctctggcatgtgcttcc 794

                                                             
Query: 541  ttaaggcgagtgagcatttgatctgtaaatgggtttcctccattatttg 589
            |||| || || |||||||||||||| |||||| ||||||||||||||||
Sbjct: 793  ttaatgcaagcgagcatttgatctgaaaatggctttcctccattatttg 745
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>gb|BT017369.1| Zea mays clone EL01N0324H03.c mRNA sequence
          Length = 1374

 Score =  182 bits (92), Expect = 9e-43
 Identities = 295/362 (81%), Gaps = 3/362 (0%)
 Strand = Plus / Plus

                                                                       
Query: 231 cgccagcctccggaactcctcgttttcctcctgggccctctcgagcctctccttgagctt 290
           ||||| |||||||||||| || ||||||   || ||  ||| ||| ||||||||||||||
Sbjct: 379 cgccatcctccggaactcatcattttccatttgagctttcttgaggctctccttgagctt 438

                                                                       
Query: 291 gcggatctcctcgtcggatttcaccctggcctctgccgccaccctctctgcttctagcct 350
             |||||||| | || ||||||| ||| || ||   ||||||| |||| ||||| |||||
Sbjct: 439 ctggatctccgcttctgatttcagcctagcttcgtacgccaccttctcagcttccagcct 498

                                                                       
Query: 351 tgcattctgttcttccatgagctgaacttgcagcttctccaccgtgatattcagcttttc 410
           ||| ||||||||||||||||||||   ||||| ||||||||| |||   || | ||||||
Sbjct: 499 tgcgttctgttcttccatgagctgctgttgcaacttctccacagtgcagtttaacttttc 558

                                                                       
Query: 411 ctccaccatggcagtaatgtttgcaagctgttcatcccgagttctgtggatctccttctt 470
           ||| ||||||   || ||||  |||||||||||||||| |||||| || |||||||| ||
Sbjct: 559 ctcgaccatgttggttatgtgcgcaagctgttcatccctagttctatgaatctccttttt 618

                                                                       
Query: 471 caattcagttatctggtcctctgaatatcccatagcatcatgaacctccatttctctatc 530
           |||||||| |||||| || ||||||||||||   |    ||| |||||  ||||||||||
Sbjct: 619 caattcagatatctgctcatctgaatatccc---gaggtatgcacctctttttctctatc 675

                                                                       
Query: 531 atgcacctccttaaggcgagtgagcatttgatctgtaaatgggtttcctccattatttgc 590
           |||||||||||| | || ||||| ||||||||||| |||||| ||||||||||| |||||
Sbjct: 676 atgcacctccttgatgctagtgaacatttgatctgaaaatggttttcctccattttttgc 735

             
Query: 591 ac 592
           ||
Sbjct: 736 ac 737
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  129 bits (65), Expect = 1e-26
 Identities = 149/177 (84%)
 Strand = Plus / Minus

                                                                            
Query: 241      cggaactcctcgttttcctcctgggccctctcgagcctctccttgagcttgcggatctcc 300
                ||||| ||||| ||||| |  |||||| ||||||| | ||  ||||||||||||||||||
Sbjct: 21107436 cggaattcctcattttcttgttgggccttctcgaggcgctttttgagcttgcggatctcc 21107377

                                                                            
Query: 301      tcgtcggatttcaccctggcctctgccgccaccctctctgcttctagccttgcattctgt 360
                || || |||   | ||| || || || |||| ||||||||||||||||||||||||||||
Sbjct: 21107376 tcatctgatcggagcctagcttcagctgccaacctctctgcttctagccttgcattctgt 21107317

                                                                         
Query: 361      tcttccatgagctgaacttgcagcttctccaccgtgatattcagcttttcctccacc 417
                ||||||||||| ||   ||||||||| || || ||||||||||||||||||||||||
Sbjct: 21107316 tcttccatgagttgctgttgcagcttgtcaacagtgatattcagcttttcctccacc 21107260



 Score =  119 bits (60), Expect = 1e-23
 Identities = 87/96 (90%)
 Strand = Plus / Minus

                                                                            
Query: 424      gtaatgtttgcaagctgttcatcccgagttctgtggatctccttcttcaattcagttatc 483
                |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| 
Sbjct: 21106196 gtaatgtttgcaagctgttcatcccgagttctctggatctcctttttcaattcagatatt 21106137

                                                    
Query: 484      tggtcctctgaatatcccatagcatcatgaacctcc 519
                || || |||| |||||| ||||||||||| ||||||
Sbjct: 21106136 tgctcttctgtatatccaatagcatcatgcacctcc 21106101



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                   
Query: 539      ccttaaggcgagtgagcatttgatctgtaaatgggtttcctccattatttg 589
                |||||| || || |||||||||||||| |||||| ||||||||||||||||
Sbjct: 21106010 ccttaatgcaagcgagcatttgatctgaaaatggctttcctccattatttg 21105960
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>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0038F20
          Length = 129595

 Score =  129 bits (65), Expect = 1e-26
 Identities = 149/177 (84%)
 Strand = Plus / Minus

                                                                         
Query: 241   cggaactcctcgttttcctcctgggccctctcgagcctctccttgagcttgcggatctcc 300
             ||||| ||||| ||||| |  |||||| ||||||| | ||  ||||||||||||||||||
Sbjct: 14152 cggaattcctcattttcttgttgggccttctcgaggcgctttttgagcttgcggatctcc 14093

                                                                         
Query: 301   tcgtcggatttcaccctggcctctgccgccaccctctctgcttctagccttgcattctgt 360
             || || |||   | ||| || || || |||| ||||||||||||||||||||||||||||
Sbjct: 14092 tcatctgatcggagcctagcttcagctgccaacctctctgcttctagccttgcattctgt 14033

                                                                      
Query: 361   tcttccatgagctgaacttgcagcttctccaccgtgatattcagcttttcctccacc 417
             ||||||||||| ||   ||||||||| || || ||||||||||||||||||||||||
Sbjct: 14032 tcttccatgagttgctgttgcagcttgtcaacagtgatattcagcttttcctccacc 13976



 Score =  119 bits (60), Expect = 1e-23
 Identities = 87/96 (90%)
 Strand = Plus / Minus

                                                                         
Query: 424   gtaatgtttgcaagctgttcatcccgagttctgtggatctccttcttcaattcagttatc 483
             |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| 
Sbjct: 12912 gtaatgtttgcaagctgttcatcccgagttctctggatctcctttttcaattcagatatt 12853

                                                 
Query: 484   tggtcctctgaatatcccatagcatcatgaacctcc 519
             || || |||| |||||| ||||||||||| ||||||
Sbjct: 12852 tgctcttctgtatatccaatagcatcatgcacctcc 12817



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 539   ccttaaggcgagtgagcatttgatctgtaaatgggtttcctccattatttg 589
             |||||| || || |||||||||||||| |||||| ||||||||||||||||
Sbjct: 12726 ccttaatgcaagcgagcatttgatctgaaaatggctttcctccattatttg 12676
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>gb|AY109813.1| Zea mays CL4777_1 mRNA sequence
          Length = 1239

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 181/225 (80%)
 Strand = Plus / Minus

                                                                        
Query: 231  cgccagcctccggaactcctcgttttcctcctgggccctctcgagcctctccttgagctt 290
            ||||| |||||||||||| || ||||||   || ||  ||| ||| ||||||||||||||
Sbjct: 1068 cgccatcctccggaactcatcattttccatttgagctttcttgaggctctccttgagctt 1009

                                                                        
Query: 291  gcggatctcctcgtcggatttcaccctggcctctgccgccaccctctctgcttctagcct 350
              |||||||| | || ||||||| ||| || ||   ||||||| |||| ||||| |||||
Sbjct: 1008 ctggatctccgcttctgatttcagcctagcttcgtacgccaccttctcagcttccagcct 949

                                                                        
Query: 351  tgcattctgttcttccatgagctgaacttgcagcttctccaccgtgatattcagcttttc 410
            ||| ||||||||||||||||||||   ||||| ||||||||| |||   || | ||||||
Sbjct: 948  tgcgttctgttcttccatgagctgctgttgcaacttctccacagtgcagtttaacttttc 889

                                                         
Query: 411  ctccaccatggcagtaatgtttgcaagctgttcatcccgagttct 455
            ||| ||||||   || ||||  |||||||||||||||| ||||||
Sbjct: 888  ctcgaccatgttggttatgtgcgcaagctgttcatccctagttct 844



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 524 ctctatcatgcacctccttaaggcgagtgagcatttgatctgtaaatgggtttcctcca 582
           ||||||||||||||||||| | || ||||| ||||||||||| |||||| |||||||||
Sbjct: 778 ctctatcatgcacctccttgatgctagtgaacatttgatctgaaaatggttttcctcca 720
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>gb|BT017593.1| Zea mays clone EL01N0430H01.c mRNA sequence
          Length = 401

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 434 caagctgttcatcccgagttctgtggatctccttcttcaat 474
           ||||||||||||||| |||||| || |||||||| ||||||
Sbjct: 41  caagctgttcatccctagttctatgaatctcctttttcaat 1
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 280     tccttgagcttgcggatctcctcgtcg 306
               |||||||||||||||||| ||||||||
Sbjct: 3883107 tccttgagcttgcggatcacctcgtcg 3883081
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>gb|AC118688.10| Mus musculus chromosome 5, clone RP23-302F24, complete sequence
          Length = 176001

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 565    gtaaatgggtttcctccattat 586
              ||||||||||||||||||||||
Sbjct: 129890 gtaaatgggtttcctccattat 129911
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>gb|AC123558.5| Mus musculus BAC clone RP23-336N16 from chromosome 5, complete sequence
          Length = 211763

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 565    gtaaatgggtttcctccattat 586
              ||||||||||||||||||||||
Sbjct: 210217 gtaaatgggtttcctccattat 210196
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 380     gcagcttctccaccgtgatatt 401
               ||||||||||||||||||||||
Sbjct: 4993467 gcagcttctccaccgtgatatt 4993488
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 272     cgagcctctccttgagcttgcggatc 297
               ||||||| ||||||||||||||||||
Sbjct: 5057051 cgagcctgtccttgagcttgcggatc 5057026
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>ref|XM_743999.1| Aspergillus fumigatus Af293 integral peroxisomal membrane protein
           (Afu7g04160) partial mRNA
          Length = 2028

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 273 gagcctctccttgagcttgcggatctcct 301
           |||||||||||||||||| ||||| ||||
Sbjct: 736 gagcctctccttgagcttacggatttcct 764
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>gb|AC117199.3| Mus musculus BAC clone RP23-134L22 from 10, complete sequence
          Length = 210514

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 574   tttcctccattatttgcacta 594
             |||||||||||||||||||||
Sbjct: 21689 tttcctccattatttgcacta 21669
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>gb|AC162908.4| Mus musculus BAC clone RP24-296A15 from chromosome 10, complete
             sequence
          Length = 170988

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 574   tttcctccattatttgcacta 594
             |||||||||||||||||||||
Sbjct: 76133 tttcctccattatttgcacta 76113
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>dbj|AK086631.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
            library, clone:D930042P12 product:unclassifiable, full
            insert sequence
          Length = 2452

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 574  tttcctccattatttgcacta 594
            |||||||||||||||||||||
Sbjct: 2248 tttcctccattatttgcacta 2268
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 355     ttctgttcttccatgagctga 375
               |||||||||||||||||||||
Sbjct: 6835781 ttctgttcttccatgagctga 6835801



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 355     ttctgttcttccatgagctga 375
               |||||||||||||||||||||
Sbjct: 6621452 ttctgttcttccatgagctga 6621432
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 209     gaatagcgcacttgttggtcgccgccagc 237
               |||| ||||||||| ||||||||||||||
Sbjct: 4475938 gaattgcgcacttgctggtcgccgccagc 4475966
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>dbj|AP006857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0002E10
          Length = 140486

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 355   ttctgttcttccatgagctga 375
             |||||||||||||||||||||
Sbjct: 86500 ttctgttcttccatgagctga 86520
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>dbj|AP005488.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0003D23
          Length = 151604

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 355   ttctgttcttccatgagctga 375
             |||||||||||||||||||||
Sbjct: 54799 ttctgttcttccatgagctga 54779
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>gb|BT016822.1| Zea mays clone Contig655 mRNA sequence
          Length = 1636

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 286 agcttgcggatctcctcgtc 305
           ||||||||||||||||||||
Sbjct: 374 agcttgcggatctcctcgtc 355
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>gb|AC150162.1| Solanum demissum chromosome 5 clone PGEC160O2 map MAP_LOC, complete
              sequence
          Length = 125813

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 575    ttcctccattatttgcacta 594
              ||||||||||||||||||||
Sbjct: 114684 ttcctccattatttgcacta 114703
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>gb|AY704421.1| Gossypium anomalum clone 9G pathogenesis-related protein 10 (PR10)
           gene, partial cds
          Length = 427

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 557 tttgatctgtaaatgggttt 576
           ||||||||||||||||||||
Sbjct: 212 tttgatctgtaaatgggttt 231
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>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete
             sequence
          Length = 121915

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 575   ttcctccattatttgcacta 594
             ||||||||||||||||||||
Sbjct: 14259 ttcctccattatttgcacta 14278
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>gb|AC140468.2| Mus musculus BAC clone RP24-394C15 from chromosome 3, complete sequence
          Length = 168853

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 473    attcagttatctggtcctct 492
              ||||||||||||||||||||
Sbjct: 105682 attcagttatctggtcctct 105701
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>gb|AC131107.3| Mus musculus BAC clone RP23-339P15 from chromosome 8, complete sequence
          Length = 214894

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   tgcttctagccttgcattct 358
             ||||||||||||||||||||
Sbjct: 54850 tgcttctagccttgcattct 54869
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>gb|AC105166.16| Mus musculus chromosome 5, clone RP24-311D15, complete sequence
          Length = 145019

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 401   tcagcttttcctccaccatg 420
             ||||||||||||||||||||
Sbjct: 96007 tcagcttttcctccaccatg 95988
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>gb|AC161600.6| Mus musculus BAC clone RP23-350K3 from chromosome 3, complete sequence
          Length = 218929

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 473   attcagttatctggtcctct 492
             ||||||||||||||||||||
Sbjct: 56738 attcagttatctggtcctct 56757
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>ref|XM_382838.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02662.1)
           partial mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 454 ctgtggatctccttcttcaa 473
           ||||||||||||||||||||
Sbjct: 956 ctgtggatctccttcttcaa 975
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>gb|AC092068.2| Homo sapiens chromosome 19 clone CTC-265F19, complete sequence
          Length = 75782

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 257   cctcctgggccctctcgagcctct 280
             ||||||||| ||||||||||||||
Sbjct: 45157 cctcctgggacctctcgagcctct 45134
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>gb|AC007437.16| Homo sapiens 12q22 BAC RPCI11-541G9 (Roswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 179854

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 399    attcagcttttcctccacca 418
              ||||||||||||||||||||
Sbjct: 106937 attcagcttttcctccacca 106918
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>dbj|AK054105.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN
            full-length enriched library, clone:E230019K20
            product:unclassifiable, full insert sequence
          Length = 1890

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 473  attcagttatctggtcctct 492
            ||||||||||||||||||||
Sbjct: 1140 attcagttatctggtcctct 1159
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>gb|AC157998.2| Mus musculus BAC clone RP23-27L18 from chromosome 9, complete sequence
          Length = 253762

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 390    caccgtgatattcagcttttcctc 413
              |||||| |||||||||||||||||
Sbjct: 125424 caccgtaatattcagcttttcctc 125447
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>ref|XM_321730.2| Anopheles gambiae str. PEST ENSANGP00000016819
           (ENSANGG00000014330), partial mRNA
          Length = 1410

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                       
Query: 399 attcagcttttcctccaccatggcagta 426
           ||||||||||||||||||| ||||||||
Sbjct: 102 attcagcttttcctccacc-tggcagta 76
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>gb|AY104803.1| Zea mays PCO064157 mRNA sequence
          Length = 1631

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 286 agcttgcggatctcctcgtc 305
           ||||||||||||||||||||
Sbjct: 389 agcttgcggatctcctcgtc 370
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>gb|AC006275.1|AC006275 Homo sapiens chromosome 19, cosmid R32203, complete sequence
          Length = 39852

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 257   cctcctgggccctctcgagcctct 280
             ||||||||| ||||||||||||||
Sbjct: 23768 cctcctgggacctctcgagcctct 23745
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>emb|AL450023.21| Human DNA sequence from clone RP11-552J9 on chromosome X Contains a
             GAGE family member pseudogene, a novel SSX family protein,
             two SSX family pseudogenes, the SSX7 gene for X breakpoint
             7 synovial sarcoma, the SSX2 gene for X breakpoint 2
             synovial sarcoma, the SSX8 gene for X breakpoint 8
             synovial sarcoma, three pseudogenes similar to part of
             ornithine aminotransferase (gyrate atrophy) (OAT), three
             ornithine aminotransferase (gyrate atrophy) (OAT)
             pseudogenes, a S100 calcium binding protein A11
             (calgizzarin) (S100A11) pseudogene and the 5' end of the
             gene for a novel protein similar to the SSX family,
             complete sequence
          Length = 185532

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   attaacaagacatccggtaa 181
             ||||||||||||||||||||
Sbjct: 76496 attaacaagacatccggtaa 76477
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>gb|AC151997.2| Mus musculus BAC clone RP23-138O21 from 8, complete sequence
          Length = 201556

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   tgcttctagccttgcattct 358
             ||||||||||||||||||||
Sbjct: 21059 tgcttctagccttgcattct 21040
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>emb|AL121766.5|CNS01DSA Human chromosome 14 DNA sequence BAC R-412H8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158064

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 109    caaccaaagtattatctgttacta 132
              ||||||| ||||||||||||||||
Sbjct: 101638 caaccaaggtattatctgttacta 101615


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,325,497
Number of Sequences: 3902068
Number of extensions: 5325497
Number of successful extensions: 103940
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 103708
Number of HSP's gapped (non-prelim): 223
length of query: 594
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 571
effective length of database: 17,143,297,704
effective search space: 9788822988984
effective search space used: 9788822988984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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