ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6p02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB038775.1| Hordeum vulgare mRNA for IDI2, complete cds 908 0.0
2dbj|AK100869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
3dbj|AK060549.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
4dbj|AK060326.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
5gb|AY738148.1| Zea mays isopentenyl-diphosphate delta isomerase ... 278 2e-71
6gb|AY104678.1| Zea mays PCO081661 mRNA sequence 276 7e-71
7gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 1... 236 6e-59
8dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 236 6e-59
9gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 236 6e-59
10gb|AC156828.8| Medicago truncatula clone mth2-18j19, complete se... 44 0.43
11dbj|AB031321.1| Nicotiana tabacum cig2 mRNA, complete cds 44 0.43
12gb|AC105966.11| Mus musculus chromosome 3, clone RP23-403H2, com... 42 1.7
13gb|AY724483.1| Rattus norvegicus clone UI-R-FJ0-cpv-a-07-0-UI un... 42 1.7
14gb|BC003422.1| Mus musculus 3-oxoacid CoA transferase 1, mRNA (c... 42 1.7
15ref|NM_024188.3| Mus musculus 3-oxoacid CoA transferase 1 (Oxct1... 42 1.7
16gb|AC161183.10| Mus musculus chromosome 3, clone RP23-172P6, com... 42 1.7
17ref|XM_809956.1| Trypanosoma cruzi strain CL Brener phosphatidyl... 42 1.7
18ref|XM_784702.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.7
19dbj|AK146158.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length... 42 1.7
20dbj|AK151695.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 1.7
21dbj|AK151662.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 1.7
22dbj|AK167681.1| Mus musculus cDNA, RIKEN full-length enriched li... 42 1.7
23dbj|AK078086.1| Mus musculus adult male medulla oblongata cDNA, ... 42 1.7
24dbj|AK010029.1| Mus musculus adult male tongue cDNA, RIKEN full-... 42 1.7
25dbj|AK009027.1| Mus musculus adult male tongue cDNA, RIKEN full-... 42 1.7
26dbj|AK011354.1| Mus musculus 10 days embryo whole body cDNA, RIK... 42 1.7
27ref|XM_577990.1| PREDICTED: Rattus norvegicus similar to ENSANGP... 42 1.7
28dbj|AB085609.1| Mus musculus mRNA for Scot, complete cds 42 1.7
29gb|AC134402.9| Mus musculus chromosome 5, clone RP24-301D19, com... 40 6.7
30ref|XM_877675.1| PREDICTED: Bos taurus similar to solute carrier... 40 6.7
31ref|XM_877629.1| PREDICTED: Bos taurus similar to solute carrier... 40 6.7
32ref|XM_877584.1| PREDICTED: Bos taurus similar to solute carrier... 40 6.7
33ref|XM_586888.2| PREDICTED: Bos taurus similar to solute carrier... 40 6.7
34gb|AC100755.8| Homo sapiens chromosome 15, clone RP11-262J5, com... 40 6.7
35gb|AC005296.2| Homo sapiens X BAC GS1-214D18 (Genome Systems Hum... 40 6.7
36gb|AC100754.8| Homo sapiens chromosome 15, clone RP11-262I11, co... 40 6.7
37gb|AC126410.12| Mus musculus chromosome 5, clone RP23-368H6, com... 40 6.7
38gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 40 6.7
39emb|AL357057.19| Human DNA sequence from clone RP11-802N13 on ch... 40 6.7
40gb|AC100756.4| Homo sapiens chromosome 18, clone RP11-529J17, co... 40 6.7
41gb|AC069302.4| Homo sapiens BAC clone RP11-322J23 from 4, comple... 40 6.7
42gb|AC109338.17| Homo sapiens chromosome 15, clone RP11-228G18, c... 40 6.7
43dbj|BS000028.1| Pan troglodytes chromosome 22 clone:PTB-087F19, ... 40 6.7
44emb|BX005121.8| Zebrafish DNA sequence from clone DKEY-5E16 in l... 40 6.7
45gb|AC008042.10|AC008042 Homo sapiens 3q25-26 BAC CITB-159N23 (Ca... 40 6.7
46dbj|AP001667.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.7
47gb|AC037193.4| Homo sapiens chromosome 3 clone RP11-334L22 map 3... 40 6.7
48gb|AC066583.5| Homo sapiens chromosome 3 clone RP11-203C4 map 3p... 40 6.7
49gb|AC073446.16| Homo sapiens chromosome 15, clone RP11-757E13, c... 40 6.7
50dbj|AP000962.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 6.7 
>dbj|AB038775.1| Hordeum vulgare mRNA for IDI2, complete cds
          Length = 1403

 Score =  908 bits (458), Expect = 0.0
 Identities = 489/496 (98%), Gaps = 3/496 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    atatattctttggataacaaacactcatcctacgcaatacatctcgtcacacggacttta 60
            ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||
Sbjct: 1363 atatattctttggataacaaacactcatcct-cgcaatacatctcgt-acacgg-cttta 1307

                                                                        
Query: 61   tttttctcacttcgaaagatcttattgttgggtgtacaacatgagcatcctatcatcaat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1306 tttttctcacttcgaaagatcttattgttgggtgtacaacatgagcatcctatcatcaat 1247

                                                                        
Query: 121  tgtgtgagaaggatgttccaccacattcatgccaaacaacgctcactggagagcatcact 180
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1246 tgtgtgagaaggatgttccaccgcattcatgccaaacaacgctcactggagagcatcact 1187

                                                                        
Query: 181  tggcacactcaatgaagcttttgatgtcgaaagttccatcaggatcagactttgtgatca 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1186 tggcacactcaatgaagcttttgatgtcgaaagttccatcaggatcagactttgtgatca 1127

                                                                        
Query: 241  cacccttttctgtaatgattgcagtaattagatttgctggagtaacgtcgaaggcggggt 300
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1126 cacccttttctgtaatgattgcagtaattagatctgctggagtaacgtcgaaggcggggt 1067

                                                                        
Query: 301  tccagactgatatacctgacgcggcaacttgctttcctagaccaccttcagagttcaaca 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 tccagactgatatacctgacgcggcaacttgctttcctagaccaccttcagagttcaaca 1007

                                                                        
Query: 361  attctttgggagatctttcttctatgacgatttgcttcccagatgggagggagagatcaa 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 attctttgggagatctttcttctatgacgatttgcttcccagatgggagggagagatcaa 947

                                                                        
Query: 421  tcgaagttactggcgctgccacgtanaactgcacgccgtgatgctttgcagcaatcgana 480
            ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 946  tcgaagttactggcgctgccacgtagaactgcacgccgtgatgctttgcagcaatcgaga 887

                            
Query: 481  ggttgtatgtaccaat 496
            ||||||||||||||||
Sbjct: 886  ggttgtatgtaccaat 871
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>dbj|AK100869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023124H10, full
            insert sequence
          Length = 1344

 Score =  291 bits (147), Expect = 1e-75
 Identities = 259/297 (87%)
 Strand = Plus / Minus

                                                                        
Query: 200  tttgatgtcgaaagttccatcaggatcagactttgtgatcacacccttttctgtaatgat 259
            |||||||| ||||||  |||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 1120 tttgatgttgaaagtctcatcagcatcagactttgtgatcacacccttttccgttatgat 1061

                                                                        
Query: 260  tgcagtaattagatttgctggagtaacgtcgaaggcggggttccagactgatatacctga 319
            ||| ||||| |||||||| |||||||| |||||||| |||||||| || |||||||||||
Sbjct: 1060 tgcggtaatcagatttgccggagtaacatcgaaggcagggttccacaccgatatacctga 1001

                                                                        
Query: 320  cgcggcaacttgctttcctagaccaccttcagagttcaacaattctttgggagatctttc 379
            |||||| |||||||| ||||| |||||||||||||||| ||| || |||||||| || ||
Sbjct: 1000 cgcggcgacttgcttacctaggccaccttcagagttcagcaactcattgggagacctctc 941

                                                                        
Query: 380  ttctatgacgatttgcttcccagatgggagggagagatcaatcgaagttactggcgctgc 439
            ||| || || |||||||  |||||||||||||||||||||||||||||||  ||||| ||
Sbjct: 940  ttcgatcacaatttgctcaccagatgggagggagagatcaatcgaagttatcggcgcagc 881

                                                                     
Query: 440  cacgtanaactgcacgccgtgatgctttgcagcaatcganaggttgtatgtaccaat 496
            |||||| || ||||| ||||||||||| |||| ||| |  ||||||||||| |||||
Sbjct: 880  cacgtagaattgcacaccgtgatgcttcgcagaaatggcgaggttgtatgtgccaat 824
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>dbj|AK060549.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-H07, full
            insert sequence
          Length = 1391

 Score =  291 bits (147), Expect = 1e-75
 Identities = 259/297 (87%)
 Strand = Plus / Minus

                                                                        
Query: 200  tttgatgtcgaaagttccatcaggatcagactttgtgatcacacccttttctgtaatgat 259
            |||||||| ||||||  |||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 1194 tttgatgttgaaagtctcatcagcatcagactttgtgatcacacccttttccgttatgat 1135

                                                                        
Query: 260  tgcagtaattagatttgctggagtaacgtcgaaggcggggttccagactgatatacctga 319
            ||| ||||| |||||||| |||||||| |||||||| |||||||| || |||||||||||
Sbjct: 1134 tgcggtaatcagatttgccggagtaacatcgaaggcagggttccacaccgatatacctga 1075

                                                                        
Query: 320  cgcggcaacttgctttcctagaccaccttcagagttcaacaattctttgggagatctttc 379
            |||||| |||||||| ||||| |||||||||||||||| ||| || |||||||| || ||
Sbjct: 1074 cgcggcgacttgcttacctaggccaccttcagagttcagcaactcattgggagacctctc 1015

                                                                        
Query: 380  ttctatgacgatttgcttcccagatgggagggagagatcaatcgaagttactggcgctgc 439
            ||| || || |||||||  |||||||||||||||||||||||||||||||  ||||| ||
Sbjct: 1014 ttcgatcacaatttgctcaccagatgggagggagagatcaatcgaagttatcggcgcagc 955

                                                                     
Query: 440  cacgtanaactgcacgccgtgatgctttgcagcaatcganaggttgtatgtaccaat 496
            |||||| || ||||| ||||||||||| |||| ||| |  ||||||||||| |||||
Sbjct: 954  cacgtagaattgcacaccgtgatgcttcgcagaaatggcgaggttgtatgtgccaat 898
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>dbj|AK060326.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H10, full
            insert sequence
          Length = 1538

 Score =  291 bits (147), Expect = 1e-75
 Identities = 259/297 (87%)
 Strand = Plus / Minus

                                                                        
Query: 200  tttgatgtcgaaagttccatcaggatcagactttgtgatcacacccttttctgtaatgat 259
            |||||||| ||||||  |||||| ||||||||||||||||||||||||||| || |||||
Sbjct: 1182 tttgatgttgaaagtctcatcagcatcagactttgtgatcacacccttttccgttatgat 1123

                                                                        
Query: 260  tgcagtaattagatttgctggagtaacgtcgaaggcggggttccagactgatatacctga 319
            ||| ||||| |||||||| |||||||| |||||||| |||||||| || |||||||||||
Sbjct: 1122 tgcggtaatcagatttgccggagtaacatcgaaggcagggttccacaccgatatacctga 1063

                                                                        
Query: 320  cgcggcaacttgctttcctagaccaccttcagagttcaacaattctttgggagatctttc 379
            |||||| |||||||| ||||| |||||||||||||||| ||| || |||||||| || ||
Sbjct: 1062 cgcggcgacttgcttacctaggccaccttcagagttcagcaactcattgggagacctctc 1003

                                                                        
Query: 380  ttctatgacgatttgcttcccagatgggagggagagatcaatcgaagttactggcgctgc 439
            ||| || || |||||||  |||||||||||||||||||||||||||||||  ||||| ||
Sbjct: 1002 ttcgatcacaatttgctcaccagatgggagggagagatcaatcgaagttatcggcgcagc 943

                                                                     
Query: 440  cacgtanaactgcacgccgtgatgctttgcagcaatcganaggttgtatgtaccaat 496
            |||||| || ||||| ||||||||||| |||| ||| |  ||||||||||| |||||
Sbjct: 942  cacgtagaattgcacaccgtgatgcttcgcagaaatggcgaggttgtatgtgccaat 886
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>gb|AY738148.1| Zea mays isopentenyl-diphosphate delta isomerase 2 mRNA, complete cds
          Length = 1382

 Score =  278 bits (140), Expect = 2e-71
 Identities = 235/267 (88%)
 Strand = Plus / Minus

                                                                        
Query: 200  tttgatgtcgaaagttccatcaggatcagactttgtgatcacacccttttctgtaatgat 259
            |||||||||||||| |||||||| |||||  ||||||||||||||||||||||| |||||
Sbjct: 1213 tttgatgtcgaaagatccatcagcatcagtttttgtgatcacacccttttctgttatgat 1154

                                                                        
Query: 260  tgcagtaattagatttgctggagtaacgtcgaaggcggggttccagactgatatacctga 319
            |||||| || ||||||||||||||||| ||||| || |||||||||||||||||||| ||
Sbjct: 1153 tgcagtgatcagatttgctggagtaacatcgaaagctgggttccagactgatataccgga 1094

                                                                        
Query: 320  cgcggcaacttgctttcctagaccaccttcagagttcaacaattctttgggagatctttc 379
             || |||||||||||||| ||||||||||||||||||| ||| || || || ||||||||
Sbjct: 1093 tgcagcaacttgctttcccagaccaccttcagagttcagcaactcctttggtgatctttc 1034

                                                                        
Query: 380  ttctatgacgatttgcttcccagatgggagggagagatcaatcgaagttactggcgctgc 439
            ||||||||| || |  | |||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 1033 ttctatgactatctcatccccagatgggagggagagatcaatggaagttaccggcgctgc 974

                                       
Query: 440  cacgtanaactgcacgccgtgatgctt 466
            ||| || | ||| ||||  ||||||||
Sbjct: 973  cacatagacctggacgctatgatgctt 947
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>gb|AY104678.1| Zea mays PCO081661 mRNA sequence
          Length = 1558

 Score =  276 bits (139), Expect = 7e-71
 Identities = 217/243 (89%)
 Strand = Plus / Minus

                                                                        
Query: 200  tttgatgtcgaaagttccatcaggatcagactttgtgatcacacccttttctgtaatgat 259
            |||||||||||||| |||||||| |||||  ||||||||||||||||||||||| |||||
Sbjct: 1212 tttgatgtcgaaagatccatcagcatcagtttttgtgatcacacccttttctgttatgat 1153

                                                                        
Query: 260  tgcagtaattagatttgctggagtaacgtcgaaggcggggttccagactgatatacctga 319
            |||||| || ||||||||||||||||| ||||| || |||||||||||||||||||| ||
Sbjct: 1152 tgcagtgatcagatttgctggagtaacatcgaaagctgggttccagactgatataccgga 1093

                                                                        
Query: 320  cgcggcaacttgctttcctagaccaccttcagagttcaacaattctttgggagatctttc 379
             || |||||||||||||| ||||||||||||||||||| ||| || || || ||||||||
Sbjct: 1092 tgcagcaacttgctttcccagaccaccttcagagttcagcaactcctttggtgatctttc 1033

                                                                        
Query: 380  ttctatgacgatttgcttcccagatgggagggagagatcaatcgaagttactggcgctgc 439
            ||||||||| || |  | |||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 1032 ttctatgactatctcatccccagatgggagggagagatcaatggaagttaccggcgctgc 973

               
Query: 440  cac 442
            |||
Sbjct: 972  cac 970
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>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09,
             complete sequence
          Length = 135363

 Score =  236 bits (119), Expect = 6e-59
 Identities = 219/253 (86%)
 Strand = Plus / Minus

                                                                         
Query: 244   ccttttctgtaatgattgcagtaattagatttgctggagtaacgtcgaaggcggggttcc 303
             ||||||| || |||||||| ||||| |||||||| |||||||| |||||||| |||||||
Sbjct: 83715 ccttttccgttatgattgcggtaatcagatttgccggagtaacatcgaaggcagggttcc 83656

                                                                         
Query: 304   agactgatatacctgacgcggcaacttgctttcctagaccaccttcagagttcaacaatt 363
             | || ||||||||||||||||| |||||||| ||||| |||||||||||||||| ||| |
Sbjct: 83655 acaccgatatacctgacgcggcgacttgcttacctaggccaccttcagagttcagcaact 83596

                                                                         
Query: 364   ctttgggagatctttcttctatgacgatttgcttcccagatgggagggagagatcaatcg 423
             | |||||||| || ||||| || || |||||||  |||||||||||||||||||||||||
Sbjct: 83595 cattgggagacctctcttcgatcacaatttgctcaccagatgggagggagagatcaatcg 83536

                                                                         
Query: 424   aagttactggcgctgccacgtanaactgcacgccgtgatgctttgcagcaatcganaggt 483
             ||||||  ||||| |||||||| || ||||| ||||||||||| |||| ||| |  ||||
Sbjct: 83535 aagttatcggcgcagccacgtagaattgcacaccgtgatgcttcgcagaaatggcgaggt 83476

                          
Query: 484   tgtatgtaccaat 496
             ||||||| |||||
Sbjct: 83475 tgtatgtgccaat 83463



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                            
Query: 200   tttgatgtcgaaagttccatcaggatcagactttgtgatcacaccct 246
             |||||||| ||||||  |||||| |||||||||||||||||||||||
Sbjct: 83861 tttgatgttgaaagtctcatcagcatcagactttgtgatcacaccct 83815
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  236 bits (119), Expect = 6e-59
 Identities = 219/253 (86%)
 Strand = Plus / Minus

                                                                           
Query: 244     ccttttctgtaatgattgcagtaattagatttgctggagtaacgtcgaaggcggggttcc 303
               ||||||| || |||||||| ||||| |||||||| |||||||| |||||||| |||||||
Sbjct: 6027632 ccttttccgttatgattgcggtaatcagatttgccggagtaacatcgaaggcagggttcc 6027573

                                                                           
Query: 304     agactgatatacctgacgcggcaacttgctttcctagaccaccttcagagttcaacaatt 363
               | || ||||||||||||||||| |||||||| ||||| |||||||||||||||| ||| |
Sbjct: 6027572 acaccgatatacctgacgcggcgacttgcttacctaggccaccttcagagttcagcaact 6027513

                                                                           
Query: 364     ctttgggagatctttcttctatgacgatttgcttcccagatgggagggagagatcaatcg 423
               | |||||||| || ||||| || || |||||||  |||||||||||||||||||||||||
Sbjct: 6027512 cattgggagacctctcttcgatcacaatttgctcaccagatgggagggagagatcaatcg 6027453

                                                                           
Query: 424     aagttactggcgctgccacgtanaactgcacgccgtgatgctttgcagcaatcganaggt 483
               ||||||  ||||| |||||||| || ||||| ||||||||||| |||| ||| |  ||||
Sbjct: 6027452 aagttatcggcgcagccacgtagaattgcacaccgtgatgcttcgcagaaatggcgaggt 6027393

                            
Query: 484     tgtatgtaccaat 496
               ||||||| |||||
Sbjct: 6027392 tgtatgtgccaat 6027380



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                              
Query: 200     tttgatgtcgaaagttccatcaggatcagactttgtgatcacaccct 246
               |||||||| ||||||  |||||| |||||||||||||||||||||||
Sbjct: 6027778 tttgatgttgaaagtctcatcagcatcagactttgtgatcacaccct 6027732
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  236 bits (119), Expect = 6e-59
 Identities = 219/253 (86%)
 Strand = Plus / Minus

                                                                           
Query: 244     ccttttctgtaatgattgcagtaattagatttgctggagtaacgtcgaaggcggggttcc 303
               ||||||| || |||||||| ||||| |||||||| |||||||| |||||||| |||||||
Sbjct: 6094109 ccttttccgttatgattgcggtaatcagatttgccggagtaacatcgaaggcagggttcc 6094050

                                                                           
Query: 304     agactgatatacctgacgcggcaacttgctttcctagaccaccttcagagttcaacaatt 363
               | || ||||||||||||||||| |||||||| ||||| |||||||||||||||| ||| |
Sbjct: 6094049 acaccgatatacctgacgcggcgacttgcttacctaggccaccttcagagttcagcaact 6093990

                                                                           
Query: 364     ctttgggagatctttcttctatgacgatttgcttcccagatgggagggagagatcaatcg 423
               | |||||||| || ||||| || || |||||||  |||||||||||||||||||||||||
Sbjct: 6093989 cattgggagacctctcttcgatcacaatttgctcaccagatgggagggagagatcaatcg 6093930

                                                                           
Query: 424     aagttactggcgctgccacgtanaactgcacgccgtgatgctttgcagcaatcganaggt 483
               ||||||  ||||| |||||||| || ||||| ||||||||||| |||| ||| |  ||||
Sbjct: 6093929 aagttatcggcgcagccacgtagaattgcacaccgtgatgcttcgcagaaatggcgaggt 6093870

                            
Query: 484     tgtatgtaccaat 496
               ||||||| |||||
Sbjct: 6093869 tgtatgtgccaat 6093857



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                              
Query: 200     tttgatgtcgaaagttccatcaggatcagactttgtgatcacaccct 246
               |||||||| ||||||  |||||| |||||||||||||||||||||||
Sbjct: 6094255 tttgatgttgaaagtctcatcagcatcagactttgtgatcacaccct 6094209
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>gb|AC156828.8| Medicago truncatula clone mth2-18j19, complete sequence
          Length = 133901

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 353   gttcaacaattctttgggagatctttcttctatgacgatttg 394
             ||||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 30204 gttcaacaactccttgggagatctctcttcaatgacaatttg 30245
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>dbj|AB031321.1| Nicotiana tabacum cig2 mRNA, complete cds
          Length = 1378

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                        
Query: 234  gtgatcacacccttttctgtaatgattgcagtaattagatttgctggagtaacgtcgaag 293
            ||||| ||||||||||| || || ||| || |||| | |||||||||||| || || || 
Sbjct: 1089 gtgatgacacccttttcagtgataattccactaatcaaatttgctggagtgacatcaaat 1030

                                                  
Query: 294  gcggggttccagactgatatacctgacgcggcaacttg 331
            || |||||||| || || ||||| || || ||||||||
Sbjct: 1029 gcagggttccaaaccgaaataccagaggcagcaacttg 992
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>gb|AC105966.11| Mus musculus chromosome 3, clone RP23-403H2, complete sequence
          Length = 201376

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 250   ctgtaatgattgcagtaatta 270
             |||||||||||||||||||||
Sbjct: 10962 ctgtaatgattgcagtaatta 10942
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>gb|AY724483.1| Rattus norvegicus clone UI-R-FJ0-cpv-a-07-0-UI unknown mRNA
          Length = 3046

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  cacacccttttctgtaatgat 259
            |||||||||||||||||||||
Sbjct: 1477 cacacccttttctgtaatgat 1457
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>gb|BC003422.1| Mus musculus 3-oxoacid CoA transferase 1, mRNA (cDNA clone MGC:6772
            IMAGE:2598824), complete cds
          Length = 1823

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  cacacccttttctgtaatgat 259
            |||||||||||||||||||||
Sbjct: 1473 cacacccttttctgtaatgat 1453
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>ref|NM_024188.3| Mus musculus 3-oxoacid CoA transferase 1 (Oxct1), mRNA
          Length = 1920

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  cacacccttttctgtaatgat 259
            |||||||||||||||||||||
Sbjct: 1449 cacacccttttctgtaatgat 1429
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>gb|AC161183.10| Mus musculus chromosome 3, clone RP23-172P6, complete sequence
          Length = 222012

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 250   ctgtaatgattgcagtaatta 270
             |||||||||||||||||||||
Sbjct: 83440 ctgtaatgattgcagtaatta 83460
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>ref|XM_809956.1| Trypanosoma cruzi strain CL Brener phosphatidylinositol-4-phosphate
            5-kinase-like (Tc00.1047053506957.140) partial mRNA
          Length = 3042

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 67   tcacttcgaaagatcttattg 87
            |||||||||||||||||||||
Sbjct: 1309 tcacttcgaaagatcttattg 1329
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>ref|XM_784702.1| PREDICTED: Strongylocentrotus purpuratus similar to
           Folylpolyglutamate synthase, mitochondrial precursor
           (Folylpoly-gamma-glutamate synthetase) (FPGS)
           (Tetrahydrofolylpolyglutamate synthase) (LOC584857),
           mRNA
          Length = 1648

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 163 tcactggagagcatcacttggcaca 187
           ||||||||||||||| |||||||||
Sbjct: 695 tcactggagagcatcgcttggcaca 719
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>dbj|AK146158.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library,
            clone:I730024K23 product:3-oxoacid CoA transferase, full
            insert sequence
          Length = 3237

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  cacacccttttctgtaatgat 259
            |||||||||||||||||||||
Sbjct: 1527 cacacccttttctgtaatgat 1507
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>dbj|AK151695.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830034F01 product:3-oxoacid CoA
            transferase, full insert sequence
          Length = 1831

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  cacacccttttctgtaatgat 259
            |||||||||||||||||||||
Sbjct: 1499 cacacccttttctgtaatgat 1479
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>dbj|AK151662.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830032O11 product:3-oxoacid CoA
            transferase, full insert sequence
          Length = 3219

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  cacacccttttctgtaatgat 259
            |||||||||||||||||||||
Sbjct: 1508 cacacccttttctgtaatgat 1488
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>dbj|AK167681.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:I530028F18 product:3-oxoacid CoA transferase, full
            insert sequence
          Length = 1930

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  cacacccttttctgtaatgat 259
            |||||||||||||||||||||
Sbjct: 1599 cacacccttttctgtaatgat 1579
to top
>dbj|AK078086.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
            enriched library, clone:6330439J10 product:3-oxoacid CoA
            transferase, full insert sequence
          Length = 2099

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  cacacccttttctgtaatgat 259
            |||||||||||||||||||||
Sbjct: 1767 cacacccttttctgtaatgat 1747
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>dbj|AK010029.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310063M03 product:3-oxoacid CoA
           transferase, full insert sequence
          Length = 1866

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 239 cacacccttttctgtaatgat 259
           |||||||||||||||||||||
Sbjct: 152 cacacccttttctgtaatgat 132
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>dbj|AK009027.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
            library, clone:2300004E12 product:3-oxoacid CoA
            transferase, full insert sequence
          Length = 1558

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  cacacccttttctgtaatgat 259
            |||||||||||||||||||||
Sbjct: 1549 cacacccttttctgtaatgat 1529
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>dbj|AK011354.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2610008O03 product:3-oxoacid CoA
            transferase, full insert sequence
          Length = 1920

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  cacacccttttctgtaatgat 259
            |||||||||||||||||||||
Sbjct: 1449 cacacccttttctgtaatgat 1429
to top
>ref|XM_577990.1| PREDICTED: Rattus norvegicus similar to ENSANGP00000010498
           (LOC502508), mRNA
          Length = 711

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 239 cacacccttttctgtaatgat 259
           |||||||||||||||||||||
Sbjct: 117 cacacccttttctgtaatgat 97
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>dbj|AB085609.1| Mus musculus mRNA for Scot, complete cds
          Length = 1852

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  cacacccttttctgtaatgat 259
            |||||||||||||||||||||
Sbjct: 1511 cacacccttttctgtaatgat 1491
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>gb|AC134402.9| Mus musculus chromosome 5, clone RP24-301D19, complete sequence
          Length = 199834

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    tccaccacattcatgccaaa 156
              ||||||||||||||||||||
Sbjct: 163581 tccaccacattcatgccaaa 163562
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>ref|XM_877675.1| PREDICTED: Bos taurus similar to solute carrier family 39 (zinc
            transporter), member 9, transcript variant 5 (LOC539399),
            mRNA
          Length = 1984

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 365  tttgggagatctttcttcta 384
            ||||||||||||||||||||
Sbjct: 1764 tttgggagatctttcttcta 1745
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>ref|XM_877629.1| PREDICTED: Bos taurus similar to solute carrier family 39 (zinc
            transporter), member 9, transcript variant 4 (LOC539399),
            mRNA
          Length = 1837

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 365  tttgggagatctttcttcta 384
            ||||||||||||||||||||
Sbjct: 1617 tttgggagatctttcttcta 1598
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>ref|XM_877584.1| PREDICTED: Bos taurus similar to solute carrier family 39 (zinc
            transporter), member 9, transcript variant 3 (LOC539399),
            mRNA
          Length = 2107

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 365  tttgggagatctttcttcta 384
            ||||||||||||||||||||
Sbjct: 1887 tttgggagatctttcttcta 1868
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>ref|XM_586888.2| PREDICTED: Bos taurus similar to solute carrier family 39 (zinc
            transporter), member 9, transcript variant 1 (LOC539399),
            mRNA
          Length = 2053

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 365  tttgggagatctttcttcta 384
            ||||||||||||||||||||
Sbjct: 1833 tttgggagatctttcttcta 1814
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>gb|AC100755.8| Homo sapiens chromosome 15, clone RP11-262J5, complete sequence
          Length = 174177

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   tttctgtaatgattgcagtaatta 270
             |||||||||||||||||| |||||
Sbjct: 20005 tttctgtaatgattgcagaaatta 20028
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>gb|AC005296.2| Homo sapiens X BAC GS1-214D18 (Genome Systems Human BAC Library)
             complete sequence
          Length = 191503

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   ttccaccacattcatgccaa 155
             ||||||||||||||||||||
Sbjct: 37185 ttccaccacattcatgccaa 37204
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>gb|AC100754.8| Homo sapiens chromosome 15, clone RP11-262I11, complete sequence
          Length = 118732

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 247   tttctgtaatgattgcagtaatta 270
             |||||||||||||||||| |||||
Sbjct: 22996 tttctgtaatgattgcagaaatta 22973
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>gb|AC126410.12| Mus musculus chromosome 5, clone RP23-368H6, complete sequence
          Length = 187058

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   tccaccacattcatgccaaa 156
             ||||||||||||||||||||
Sbjct: 94574 tccaccacattcatgccaaa 94593
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>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 328     cttgctttcctagaccaccttcag 351
               |||||||| |||||||||||||||
Sbjct: 2784997 cttgcttttctagaccaccttcag 2784974
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>emb|AL357057.19| Human DNA sequence from clone RP11-802N13 on chromosome 6 Contains part
             of the CLIC5 gene for chloride intracellular channel 5,
             complete sequence
          Length = 58133

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 364   ctttgggagatctttcttct 383
             ||||||||||||||||||||
Sbjct: 44604 ctttgggagatctttcttct 44623
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>gb|AC100756.4| Homo sapiens chromosome 18, clone RP11-529J17, complete sequence
          Length = 173833

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   tttctgtaatgattgcagtaatta 270
             |||||||||||||||||| |||||
Sbjct: 20006 tttctgtaatgattgcagaaatta 20029
to top
>gb|AC069302.4| Homo sapiens BAC clone RP11-322J23 from 4, complete sequence
          Length = 178780

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 246  ttttctgtaatgattgcagtaatt 269
            |||||||||||||||| |||||||
Sbjct: 3647 ttttctgtaatgattgtagtaatt 3670
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>gb|AC109338.17| Homo sapiens chromosome 15, clone RP11-228G18, complete sequence
          Length = 141868

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   tttctgtaatgattgcagtaatta 270
             |||||||||||||||||| |||||
Sbjct: 10112 tttctgtaatgattgcagaaatta 10135
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>dbj|BS000028.1| Pan troglodytes chromosome 22 clone:PTB-087F19, map 22, complete
             sequences
          Length = 223409

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   ttccaccacattcatgccaa 155
             ||||||||||||||||||||
Sbjct: 31185 ttccaccacattcatgccaa 31204
to top
>emb|BX005121.8| Zebrafish DNA sequence from clone DKEY-5E16 in linkage group 20,
            complete sequence
          Length = 211231

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 251  tgtaatgattgcagtaatta 270
            ||||||||||||||||||||
Sbjct: 5613 tgtaatgattgcagtaatta 5632
to top
>gb|AC008042.10|AC008042 Homo sapiens 3q25-26 BAC CITB-159N23 (California Institute of
            Technology BAC Library) complete sequence
          Length = 121041

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  tggagagcatcacttggcac 186
            ||||||||||||||||||||
Sbjct: 9124 tggagagcatcacttggcac 9105
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>dbj|AP001667.1| Homo sapiens genomic DNA, chromosome 21q, section 11/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    ttccaccacattcatgccaa 155
              ||||||||||||||||||||
Sbjct: 127302 ttccaccacattcatgccaa 127321
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>gb|AC037193.4| Homo sapiens chromosome 3 clone RP11-334L22 map 3p, complete sequence
          Length = 182261

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    tggagagcatcacttggcac 186
              ||||||||||||||||||||
Sbjct: 116120 tggagagcatcacttggcac 116139
to top
>gb|AC066583.5| Homo sapiens chromosome 3 clone RP11-203C4 map 3p, complete sequence
          Length = 160785

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    tggagagcatcacttggcac 186
              ||||||||||||||||||||
Sbjct: 123811 tggagagcatcacttggcac 123830
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>gb|AC073446.16| Homo sapiens chromosome 15, clone RP11-757E13, complete sequence
          Length = 185123

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 247    tttctgtaatgattgcagtaatta 270
              |||||||||||||||||| |||||
Sbjct: 140779 tttctgtaatgattgcagaaatta 140756
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>dbj|AP000962.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B821P16,
             LL56-APP region, complete sequence
          Length = 185300

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   ttccaccacattcatgccaa 155
             ||||||||||||||||||||
Sbjct: 58846 ttccaccacattcatgccaa 58865


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,239,642
Number of Sequences: 3902068
Number of extensions: 4239642
Number of successful extensions: 70291
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70135
Number of HSP's gapped (non-prelim): 154
length of query: 498
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 476
effective length of database: 17,147,199,772
effective search space: 8162067091472
effective search space used: 8162067091472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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