>STP2_HUMAN (Q05952) Nuclear transition protein 2 (TP-2) (TP2)|
          Length = 138

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = +3

Query: 279 SSKGPCC*RHPEAHQNSEGYQSAHPRHHP*ETSSKVQNRQHCSP*QEAPLSCRC 440
           SS+ P   R+P    +S G+QS  P   P     K     H SP +   L CRC
Sbjct: 49  SSQSPASHRNPTGAHSSSGHQSQSPNTSPPPKRHKKTMNSHHSPMRPTILHCRC 102

>STP2_GORGO (Q9N1A5) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)|
          Length = 133

 Score = 33.1 bits (74), Expect = 0.73
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +3

Query: 258 HRWACHRSS-KGPCC*RHPEAHQNSEGYQSAHPRHHP*ETSSKVQNRQHCSP*QEAPLSC 434
           HR +  RSS + P   R+P    +S G+QS  P   P     K     H SP +   L C
Sbjct: 41  HRGSRSRSSSQSPASHRNPTGAHSSSGHQSQSPNTSPPPKRHKKTMNSHHSPRRPTILHC 100

Query: 435 RC 440
            C
Sbjct: 101 SC 102

>STP2_PANTR (Q9N1A7) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)|
          Length = 133

 Score = 32.7 bits (73), Expect = 0.95
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = +3

Query: 279 SSKGPCC*RHPEAHQNSEGYQSAHPRHHP*ETSSKVQNRQHCSP*QEAPLSCRC 440
           SS+ P   R+P    +S G+QS  P   P     K     H SP +   L C C
Sbjct: 49  SSQSPASHRNPTGAHSSSGHQSQSPNTSPPPKRHKKTMNSHHSPMRPTILHCSC 102

>ABCC8_CRICR (Q09427) ATP-binding cassette transporter sub-family C member 8|
            (Sulfonylurea receptor 1)
          Length = 1581

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 8/119 (6%)
 Frame = -2

Query: 410  WRTMLSILNLGRGFLWMMAWMSRLIAF*ILMCLRMSLATWTFGASVTCPSVANFSRDSNP 231
            WR     L+     L  +   S+L+   +L+ +   LA WT  A V  P+  N S  S  
Sbjct: 997  WRACTKYLSSAGILLLSLLVFSQLLKHMVLVAIDYWLAKWTDSALVLSPAARNCSL-SQE 1055

Query: 230  CISGQRE*DYGRLGSTLLSTSAIICLCPSLD--------AKKLHPESLL*STLFLADCR 78
            C   Q    Y  + + L S   ++CL  S+         AK+LH  SLL + + LA  R
Sbjct: 1056 CDLDQSV--YAMVFTLLCSLGIVLCLVTSVTVEWTGLKVAKRLH-RSLL-NRIILAPMR 1110

>STP2_PONPY (Q9N1A4) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)|
          Length = 138

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 19/62 (30%), Positives = 25/62 (40%)
 Frame = +3

Query: 255 RHRWACHRSSKGPCC*RHPEAHQNSEGYQSAHPRHHP*ETSSKVQNRQHCSP*QEAPLSC 434
           R  W+   SS+ P    +P    +S G+QS  P   P     K     H SP +   L C
Sbjct: 47  RGSWS-QNSSQSPASHHNPTGAHSSSGHQSQSPNDSPPPKRHKKTMNSHHSPTRPTILHC 105

Query: 435 RC 440
            C
Sbjct: 106 SC 107

>ABCC8_HUMAN (Q09428) ATP-binding cassette transporter sub-family C member 8|
            (Sulfonylurea receptor 1)
          Length = 1580

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
 Frame = -2

Query: 410  WRTMLSILNLGRGFLWMMAWMSRLIAF*ILMCLRMSLATWTFGASVTCPSVANFSRDSNP 231
            WR     L+     L  +   S+L+   +L+ +   LA WT  A    P+  N S  S  
Sbjct: 996  WRACAKYLSSAGILLLSLLVFSQLLKHMVLVAIDYWLAKWTDSALTLTPAARNCSL-SQE 1054

Query: 230  CISGQRE*DYGRLGSTLLSTSAIICLCPSLD--------AKKLHPESLL*STLFLADCR 78
            C   Q    Y  + + L S   ++CL  S+         AK+LH  SLL + + LA  R
Sbjct: 1055 CTLDQTV--YAMVFTVLCSLGIVLCLVTSVTVEWTGLKVAKRLH-RSLL-NRIILAPMR 1109

>ABCC8_RAT (Q09429) ATP-binding cassette transporter sub-family C member 8|
            (Sulfonylurea receptor 1)
          Length = 1581

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
 Frame = -2

Query: 410  WRTMLSILNLGRGFLWMMAWMSRLIAF*ILMCLRMSLATWTFGASVTCPSVANFSRDSNP 231
            WR     L+     L  +   S+L+   +L+ +   LA WT  A V  P+  N S  S  
Sbjct: 997  WRACTKYLSSAGILLLSLLVFSQLLKHMVLVAIDYWLAKWTDSALVLSPAARNCSL-SQE 1055

Query: 230  CISGQRE*DYGRLGSTLLSTSAIICLCPSLD--------AKKLHPESLL*STLFLADCR 78
            C   Q    Y  + + L S    +CL  S+         AK+LH  SLL + + LA  R
Sbjct: 1056 CALDQSV--YAMVFTVLCSLGIALCLVTSVTVEWTGLKVAKRLH-RSLL-NRIILAPMR 1110

>PDPN_CANFA (Q95152) Podoplanin precursor (Glycoprotein 38) (Gp38) (Mucin-type|
           membrane protein Gp40)
          Length = 169

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 31/94 (32%), Positives = 42/94 (44%)
 Frame = -1

Query: 567 REATLLAVLTWAGTMRPRLQDISSVAPISTIAEGAESALIQSNTYNSVVPPVMENNAVDF 388
           R   LL VL  AG +R      S+V P   I  G E +++   T +SVV P  E+N V  
Sbjct: 3   RVPVLLLVLGGAG-LRVPAAGASTVRP-DDIIPGVEDSVVTPGTEDSVVTPGAEDNVV-- 58

Query: 387 EPWTRFLMDDGVDEPIDSLLNFDVPQDVVSNMDL 286
                   D   +EP +S L   V ++  S  DL
Sbjct: 59  -------TDGATEEPYESGLTPLVTKNTESVTDL 85

>STP2_PANPA (Q9N1A6) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)|
          Length = 133

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +3

Query: 258 HRWACHRSS-KGPCC*RHPEAHQNSEGYQSAHPRHHP*ETSSKVQNRQHCSP*QEAPLSC 434
           HR +  RSS + P   R+P    +S G+QS  P   P     K     H SP     L C
Sbjct: 41  HRGSRSRSSSQSPASHRNPTGAHSSSGHQSQSPNTSPPPKRHKKTMNSHHSP-MRPTLHC 99

Query: 435 RC 440
            C
Sbjct: 100 SC 101

>ABCC9_RAT (Q63563) ATP-binding cassette transporter sub-family C member 9|
            (Sulfonylurea receptor 2)
          Length = 1545

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -2

Query: 410  WRTMLSILNLGRGFLWMMAWMSRLIAF*ILMCLRMSLATWTFGASVTCPSVAN 252
            W+T    L  G  FL  +   S+L+   +++ +   LATWT   S+  P  A+
Sbjct: 975  WKTCWWYLTSGGFFLLFLMIFSKLLKHSVIVAIDYWLATWTSEYSINDPGKAD 1027

>ABCC9_MOUSE (P70170) ATP-binding cassette transporter sub-family C member 9|
            (Sulfonylurea receptor 2)
          Length = 1546

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -2

Query: 410  WRTMLSILNLGRGFLWMMAWMSRLIAF*ILMCLRMSLATWTFGASVTCPSVAN 252
            W+T    L  G  FL  +   S+L+   +++ +   LATWT   S+  P  A+
Sbjct: 976  WKTCWWYLTSGGFFLLFLMIFSKLLKHSVIVAIDYWLATWTSEYSINHPGKAD 1028

>PUR7_BACSU (P12046) Phosphoribosylaminoimidazole-succinocarboxamide synthase|
           (EC 6.3.2.6) (SAICAR synthetase) (Vegetative protein
           286A) (VEG286A)
          Length = 241

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 21/75 (28%), Positives = 34/75 (45%)
 Frame = +2

Query: 365 IRNLVQGSKSTALFSITGGTTEL*VLLWISADSAPSAMVEMGATDDISWSLGLIVPAQVR 544
           +RN+V GS S  L    G   E  ++ +   D A   + +   T+D  W L    P QV 
Sbjct: 95  VRNVVAGSMSKRLGIPEGTELEQPIIEFYYKDDA---LGDPLITEDHIWLLKAATPEQVE 151

Query: 545 TAKRVASLVRVHIHN 589
           T K + ++V   + +
Sbjct: 152 TIKSITTIVNEELQS 166


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,942,936
Number of Sequences: 219361
Number of extensions: 2007980
Number of successful extensions: 5237
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5233
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6086476506
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)