| Clone Name | rbags6o24 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X74545.1|TAATP2 T.aestivum atp-2 mRNA for ATP synthase beta subunit Length = 1891 Score = 63.9 bits (32), Expect = 4e-08 Identities = 51/58 (87%) Strand = Plus / Minus Query: 9 ttaacttgtncagggtggtggtaacacctcgtnatcaagcattctccttggcgatctt 66 ||||||||| ||| | |||||||||||||||| |||| |||||||| |||||||||| Sbjct: 1710 ttaacttgtacagagcggtggtaacacctcgtcatcaggcattctcgctggcgatctt 1653
>ref|XM_801267.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511297.10) partial mRNA Length = 6591 Score = 38.2 bits (19), Expect = 2.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 45 aagcattctccttggcgat 63 ||||||||||||||||||| Sbjct: 5594 aagcattctccttggcgat 5576
>ref|XM_806101.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511365.100) partial mRNA Length = 1024 Score = 38.2 bits (19), Expect = 2.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 45 aagcattctccttggcgat 63 ||||||||||||||||||| Sbjct: 27 aagcattctccttggcgat 9
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 36.2 bits (18), Expect = 9.9 Identities = 20/21 (95%) Strand = Plus / Minus Query: 15 tgtncagggtggtggtaacac 35 ||| ||||||||||||||||| Sbjct: 1514415 tgtccagggtggtggtaacac 1514395
>ref|XM_569797.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNC05030) partial mRNA Length = 1275 Score = 36.2 bits (18), Expect = 9.9 Identities = 20/21 (95%) Strand = Plus / Plus Query: 15 tgtncagggtggtggtaacac 35 ||| ||||||||||||||||| Sbjct: 456 tgtccagggtggtggtaacac 476
>gb|AC091189.4| Homo sapiens chromosome 8, clone RP11-606D13, complete sequence Length = 174458 Score = 36.2 bits (18), Expect = 9.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 19 cagggtggtggtaacacc 36 |||||||||||||||||| Sbjct: 21721 cagggtggtggtaacacc 21704
>ref|XM_687081.1| PREDICTED: Danio rerio similar to Adenylate cyclase, type II (ATP pyrophosphate-lyase 2) (Adenylyl cyclase 2) (LOC563724), mRNA Length = 2499 Score = 36.2 bits (18), Expect = 9.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 48 cattctccttggcgatct 65 |||||||||||||||||| Sbjct: 1612 cattctccttggcgatct 1595
>gb|AC174765.1| Gasterosteus aculeatus clone VMRC28-42K03, complete sequence Length = 143816 Score = 36.2 bits (18), Expect = 9.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 22 ggtggtggtaacacctcg 39 |||||||||||||||||| Sbjct: 129901 ggtggtggtaacacctcg 129918 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 234,297 Number of Sequences: 3902068 Number of extensions: 234297 Number of successful extensions: 13380 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 13370 Number of HSP's gapped (non-prelim): 10 length of query: 66 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 45 effective length of database: 17,151,101,840 effective search space: 771799582800 effective search space used: 771799582800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)