ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags6o21 |
|---|---|
| Clone Library Name | barley_pub |
>ALG9_MOUSE (Q8VDI9) Alpha-1,2-mannosyltransferase ALG9 (EC 2.4.1.-)| (Asparagine-linked glycosylation protein 9 homolog) (Disrupted in bipolar disorder protein 1 homolog) Length = 611 Score = 77.4 bits (189), Expect = 4e-14 Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 3/128 (2%) Frame = -2 Query: 698 HRYPSSFFVPSYISEVRWIDDGFRGLLPFPFNETLGGTTAAPSYFNTKNKASDKQYLKDI 519 +R+PSSF +P ++++I FRG LP PF E T P++ N +N+ +Y+ DI Sbjct: 473 YRFPSSFLLPDNW-QLQFIPSEFRGQLPKPFAEGPLATRTVPTHMNDQNREEPSRYI-DI 530 Query: 518 GACNLLMELDLRRPYPSRGNDLS---TWETLASLPFLDRELSPALYRSFFIPYQWEHKNV 348 C+ L++LD R P N S W +LA PFLD S L R+F++P+ + V Sbjct: 531 SKCHYLVDLDTMRETPREPNYSSHREEWVSLAHRPFLDASRSSKLLRAFYVPFLSDQYTV 590 Query: 347 FGLYKLLR 324 + Y +L+ Sbjct: 591 YVNYTILK 598
>ALG9_HUMAN (Q9H6U8) Alpha-1,2-mannosyltransferase ALG9 (EC 2.4.1.-)| (Asparagine-linked glycosylation protein 9 homolog) (Disrupted in bipolar disorder protein 1) Length = 611 Score = 74.3 bits (181), Expect = 3e-13 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 3/143 (2%) Frame = -2 Query: 698 HRYPSSFFVPSYISEVRWIDDGFRGLLPFPFNETLGGTTAAPSYFNTKNKASDKQYLKDI 519 +R+PSSF +P ++++I FRG LP PF E T P+ N +N +Y+ DI Sbjct: 473 YRFPSSFLLPDNW-QLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYI-DI 530 Query: 518 GACNLLMELDLRRPYPSR---GNDLSTWETLASLPFLDRELSPALYRSFFIPYQWEHKNV 348 C+ L++LD R P ++ W +LA PFLD S L R+F++P+ + V Sbjct: 531 SKCHYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTV 590 Query: 347 FGLYKLLRRLPTDQGQLKANSSG 279 + Y +L+ P Q++ S G Sbjct: 591 YVNYTILK--PRKAKQIRKKSGG 611
>YTH3_CAEEL (P54002) Putative glycosyl transferase C14A4.3 in chromosome II (EC| 2.-.-.-) Length = 603 Score = 68.6 bits (166), Expect = 2e-11 Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 15/141 (10%) Frame = -2 Query: 698 HRYPSSFFVPSYIS-----EVRWIDDGFRGLLPFPF---NETLGGTTAAPSYFNTKNKAS 543 HR+PSSFF+P +S E+R+I FRGLLP PF ++ + T P+ N N+ Sbjct: 463 HRFPSSFFIPQTVSDGKKVEMRFIQSEFRGLLPKPFLKSDKLVEVTRHIPTEMNNLNQEE 522 Query: 542 DKQYLKDIGACNLLMELDLRRPYPSRGNDL----STWETLASLPFLDRELSP---ALYRS 384 +Y+ D+ +C+ ++++D+ P R D W+ + SLPF+D S L R+ Sbjct: 523 ISRYV-DLDSCDYVVDVDM--PQSDREPDFRKMEDNWKPVDSLPFIDVSKSTGFHGLLRA 579 Query: 383 FFIPYQWEHKNVFGLYKLLRR 321 F++P+ NV L R+ Sbjct: 580 FYVPFLSAKHNVMTTCTLYRK 600
>YFV5_SCHPO (Q9P7Q9) Putative glycosyl transferase C1834.05 in chromosome I| precursor (EC 2.-.-.-) Length = 577 Score = 48.1 bits (113), Expect = 3e-05 Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 13/141 (9%) Frame = -2 Query: 698 HRYPSSFFVPSYISEVRWIDDGFRGLLPFPFNETLG------GTTAAPSYFNTKNKASDK 537 +RYPS+FF+P S ++++ F G+LP F E+ G P + N N Sbjct: 429 YRYPSTFFLPDN-SRLKFVKSEFDGILPGEFVESNSTWWNREGYYQIPEHMNEFNNEEPT 487 Query: 536 QYLKDIGACNLLMELD-------LRRPYPSRGNDLSTWETLASLPFLDRELSPALYRSFF 378 +Y + +C+ L++L+ + P S+ + W + PF+D + +P + R+F Sbjct: 488 RYTS-LESCDFLIDLEFDHSKATVNEPIYSKSDG---WIPVMVYPFIDTKQTPFMGRAFA 543 Query: 377 IPYQWEHKNVFGLYKLLRRLP 315 +P+ + +G Y++L + P Sbjct: 544 VPF---IEPKWGRYEILVKKP 561
>ALG9_YEAST (P53868) Probable mannosyltransferase ALG9 (EC 2.4.1.-)| Length = 555 Score = 40.0 bits (92), Expect = 0.007 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 7/116 (6%) Frame = -2 Query: 698 HRYPSSFFVPSYISEVRWIDDGFRGLLPFPFNET---LGGTTAAPSYFNTKNKASDKQYL 528 + +PSSF +P ++++ GF GLLP F E+ P N KN D Sbjct: 405 YHFPSSFLLPDN-HRLKFVKSGFDGLLPGDFPESGSIFKKIRTLPKGMNNKN-IYDTGKE 462 Query: 527 KDIGACNLLMEL----DLRRPYPSRGNDLSTWETLASLPFLDRELSPALYRSFFIP 372 I C+ +++ +L + + + + W LA F+D E S L R+F++P Sbjct: 463 WPITRCDYFIDIVAPINLTKDVFNPLHLMDNWNKLACAAFIDGENSKILGRAFYVP 518
>HPN_HELPY (P0A0V6) Histidine-rich metal-binding polypeptide| Length = 59 Score = 33.9 bits (76), Expect = 0.49 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = -3 Query: 451 QHGRHWHRYHF*TESFHRHYTGRSSYHTNGSTRTFSGCIS 332 QHG H H +H + H HY G +H + S+ GC S Sbjct: 6 QHGGHHHHHH---HTHHHHYHGGEHHHHHHSSHHEEGCCS 42
>HPN_HELPJ (P0A0V7) Histidine-rich, metal binding polypeptide| Length = 59 Score = 33.9 bits (76), Expect = 0.49 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = -3 Query: 451 QHGRHWHRYHF*TESFHRHYTGRSSYHTNGSTRTFSGCIS 332 QHG H H +H + H HY G +H + S+ GC S Sbjct: 6 QHGGHHHHHH---HTHHHHYHGGEHHHHHHSSHHEEGCCS 42
>WNK1_MOUSE (P83741) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein| kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2377 Score = 31.6 bits (70), Expect = 2.4 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 1/94 (1%) Frame = +1 Query: 355 LCSHWYGMKNDRYSAGESSLSRNGSDANVSHVDRSFPREG*GRLRSSSISKLHAPMSFKY 534 LCS ++N S S S S N S ++ R RLR + ++ S + Sbjct: 2031 LCSKSLPVQNLSQSLSNSFNSSYMSSDNESDIEDEDLRLELRRLREKHLKEIQDLQSRQK 2090 Query: 535 CLSEALFLVL-K*DGAAVVPPSVSLKGNGRRPRK 633 E+L+ L K A ++PP+ L G RRP K Sbjct: 2091 HEIESLYTKLGKVPPAVIIPPAAPLSGRRRRPTK 2124
>UAP1_SCHPO (O94617) Probable UDP-N-acetylglucosamine pyrophosphorylase (EC| 2.7.7.23) Length = 475 Score = 31.2 bits (69), Expect = 3.2 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 11/79 (13%) Frame = +1 Query: 112 AWERTSLQSLHTDNIASISQTGGAVIRMKI*GTKFANRFD-PAKPKI----------QLT 258 +W RT L+ + ++A++ GG R+ G K R P P I L Sbjct: 84 SWWRTGLREIARGHVAALVLAGGQGTRLGFAGPKGCFRLGLPNNPSIFELQAQKIKKSLA 143 Query: 259 EATVACPPDELALSCPWSV 315 A A P E ++S PW + Sbjct: 144 LARAAFPDQEASISIPWYI 162
>SN1L2_CHICK (Q9IA88) Serine/threonine-protein kinase SNF1-like kinase 2 (EC| 2.7.11.1) (Qin-induced kinase) Length = 798 Score = 30.0 bits (66), Expect = 7.1 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 11/91 (12%) Frame = +1 Query: 232 PAKPKIQLTEATVACPPDELALSCPWSVGSLLSNLYSPKTF----------LCSHWYGMK 381 PA P+ T AT PP + A +C S LLS L +F L H++G+ Sbjct: 671 PACPQTSQTSATNGLPPSDSAGTCKASNSLLLSELQRENSFELAFGGNSQLLQPHFFGVS 730 Query: 382 NDRYSAGESSLSRN-GSDANVSHVDRSFPRE 471 S+ L + +NVS V +F ++ Sbjct: 731 VSPVSSAAHLLDTHLYISSNVSPVGTTFSQQ 761
>CATA_BRUSU (Q8FWU0) Catalase (EC 1.11.1.6)| Length = 498 Score = 29.6 bits (65), Expect = 9.2 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -3 Query: 442 RHWHRYHF*TESFHRHYTGRSSYHTNGSTR 353 R+W ++HF T H+H+T + G TR Sbjct: 207 RYWVKFHFKTMQGHKHWTNAEAEQVIGRTR 236
>CATA_BRUME (P0A326) Catalase (EC 1.11.1.6)| Length = 498 Score = 29.6 bits (65), Expect = 9.2 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -3 Query: 442 RHWHRYHF*TESFHRHYTGRSSYHTNGSTR 353 R+W ++HF T H+H+T + G TR Sbjct: 207 RYWVKFHFKTMQGHKHWTNAEAEQVIGRTR 236
>CATA_BRUAB (P0A327) Catalase (EC 1.11.1.6)| Length = 498 Score = 29.6 bits (65), Expect = 9.2 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -3 Query: 442 RHWHRYHF*TESFHRHYTGRSSYHTNGSTR 353 R+W ++HF T H+H+T + G TR Sbjct: 207 RYWVKFHFKTMQGHKHWTNAEAEQVIGRTR 236
>HGD_HUMAN (Q93099) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 445 Score = 29.6 bits (65), Expect = 9.2 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +3 Query: 288 VSFELPLVGRQPPQQLIQPENVLVLPLVWYEERPV 392 V FELP +G L P + L+ P+ WYE+R V Sbjct: 206 VHFELPDLGPIGANGLANPRDFLI-PIAWYEDRQV 239 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,243,711 Number of Sequences: 219361 Number of extensions: 2076762 Number of successful extensions: 4923 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 4730 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4915 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
