ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6o21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103701.1| Oryza sativa (japonica cultivar-group) cDNA clon... 339 7e-90
2gb|AY110062.1| Zea mays CL19880_1 mRNA sequence 228 2e-56
3ref|NM_188371.1| Oryza sativa (japonica cultivar-group), predic... 206 7e-50
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 206 7e-50
5dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic D... 206 7e-50
6gb|AC105286.5| Homo sapiens BAC clone RP11-107L21 from 2, comple... 42 2.4
7gb|AY393092.1| Homo sapiens clone RA702-G5-25.fa immunoglobulin ... 40 9.6
8gb|BT012806.1| Lycopersicon esculentum clone 113825R, mRNA sequence 40 9.6
9gb|AC118051.7| Mus musculus chromosome 1, clone RP24-430E15, com... 40 9.6
10ref|XM_384216.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 9.6
11ref|XM_803030.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.6
12emb|Z81087.1|CEF53E4 Caenorhabditis elegans Cosmid F53E4, comple... 40 9.6
13ref|XM_815891.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.6
14gb|AC123555.4| Mus musculus BAC clone RP23-139L20 from 1, comple... 40 9.6
15gb|AC139728.3| Carollia perspicillata clone 29G20, complete sequ... 40 9.6
16gb|AC092897.6| Homo sapiens 3 BAC RP11-292P2 (Roswell Park Cance... 40 9.6
17gb|AE005837.1| Caulobacter crescentus CB15 section 163 of 359 of... 40 9.6
18gb|AC079329.15| Homo sapiens chromosome 11, clone RP11-265D17, c... 40 9.6
19gb|AC025106.8| Homo sapiens chromosome 11, clone RP11-734D5, com... 40 9.6
20dbj|AK081518.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 9.6
21emb|BX510913.9| Zebrafish DNA sequence from clone CH211-202D4 in... 40 9.6
22gb|AC130831.4| Mus musculus BAC clone RP24-80P9 from 14, complet... 40 9.6
23gb|AC148007.3| Mus musculus BAC clone RP23-273G4 from 1, complet... 40 9.6
24emb|AL772231.8| Mouse DNA sequence from clone RP23-398O7 on chro... 40 9.6
25gb|AC158992.2| Mus musculus BAC clone RP24-396L14 from chromosom... 40 9.6
26gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 40 9.6 
>dbj|AK103701.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136L19, full
            insert sequence
          Length = 2231

 Score =  339 bits (171), Expect = 7e-90
 Identities = 339/395 (85%)
 Strand = Plus / Minus

                                                                        
Query: 305  cttggtcggtaggcagcctcctcagcaacttatacagcccgaaaacgttcttgtgctccc 364
            ||||||| |||||||||||||||||||  || ||||| || ||||| || || |||| ||
Sbjct: 1898 cttggtcagtaggcagcctcctcagcagtttgtacaggccaaaaacattgttttgctgcc 1839

                                                                        
Query: 365  attggtatggtatgaagaacgaccggtatagtgccggtgaaagctctctgtctagaaatg 424
            || |||  ||||||||||| |||||||||| ||| |||||||||||||| || ||||| |
Sbjct: 1838 atcggtgcggtatgaagaatgaccggtataatgcaggtgaaagctctctatccagaaagg 1779

                                                                        
Query: 425  gtagcgatgccaatgtctcccatgttgacaggtcgtttccacgagaggggtaaggccgcc 484
            | ||||  |||| |||||||||||| ||||  ||  |||| || || ||||||||||| |
Sbjct: 1778 gcagcgcagccagtgtctcccatgtcgacaaatcacttcctcgggatgggtaaggccgtc 1719

                                                                        
Query: 485  tcagatcaagctccatcagtaagttgcatgctccaatgtctttcaaatattgcttgtcgg 544
            | |||||||| |||| ||||||| | ||||| ||||||||||||| |||||| |  || |
Sbjct: 1718 taagatcaagttccaccagtaagctacatgccccaatgtctttcagatattgttcatcag 1659

                                                                        
Query: 545  aggccttgttcttggtattgaaataagatggagcagcagtggtgcctcccagtgtttcat 604
            ||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1658 aggccttgttcttgtcattgaaataagatggagcagcagtggtgcctcccagggtttcat 1599

                                                                        
Query: 605  tgaagggaaatgggagaaggcctcggaaaccgtcatctatccagcgaacttcactgatat 664
            ||||||||||||| ||||| |||||||| || ||||||||||| | ||||||||| ||||
Sbjct: 1598 tgaagggaaatggaagaagccctcggaagccatcatctatccaccaaacttcactaatat 1539

                                               
Query: 665  aggagggtacgaagaatgatgaaggatagcggtgc 699
            ||||||||| |||||| ||||| ||||||||||||
Sbjct: 1538 aggagggtatgaagaacgatgatggatagcggtgc 1504
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>gb|AY110062.1| Zea mays CL19880_1 mRNA sequence
          Length = 733

 Score =  228 bits (115), Expect = 2e-56
 Identities = 310/375 (82%)
 Strand = Plus / Minus

                                                                       
Query: 321 cctcctcagcaacttatacagcccgaaaacgttcttgtgctcccattggtatggtatgaa 380
           ||||||||| | ||| ||||| ||||| || || || || | |||| |||||||||||||
Sbjct: 508 cctcctcagtagcttgtacaggccgaacacattgttttgttgccatcggtatggtatgaa 449

                                                                       
Query: 381 gaacgaccggtatagtgccggtgaaagctctctgtctagaaatggtagcgatgccaatgt 440
           ||| ||||| |||| ||| || |||||||||||||| || || || || |  ||||||| 
Sbjct: 448 gaaggaccgatataatgcaggggaaagctctctgtccaggaacggcagtgcggccaatgc 389

                                                                       
Query: 441 ctcccatgttgacaggtcgtttccacgagaggggtaaggccgcctcagatcaagctccat 500
           ||||||||| |||| |||  | || || |||||||||||||| || |||||||| |||| 
Sbjct: 388 ctcccatgtcgacaagtcactcccgcgcgaggggtaaggccgtcttagatcaagttccac 329

                                                                       
Query: 501 cagtaagttgcatgctccaatgtctttcaaatattgcttgtcggaggccttgttcttggt 560
           ||||||||| ||||||||||||||||||| |||||||   || |  |||||||||||| |
Sbjct: 328 cagtaagttacatgctccaatgtctttcagatattgcccttcagccgccttgttcttgtt 269

                                                                       
Query: 561 attgaaataagatggagcagcagtggtgcctcccagtgtttcattgaagggaaatgggag 620
           |||||| || || ||||| |||||||| || |||||||| || |||||||||||||| ||
Sbjct: 268 attgaagtaggacggagctgcagtggtcccacccagtgtctcgttgaagggaaatggaag 209

                                                                       
Query: 621 aaggcctcggaaaccgtcatctatccagcgaacttcactgatataggagggtacgaagaa 680
            |  || ||||| || ||||||||||| || |||||||||||||| ||||||| ||||||
Sbjct: 208 taacccacggaagccatcatctatccaccggacttcactgatataagagggtatgaagaa 149

                          
Query: 681 tgatgaaggatagcg 695
            ||||| ||||||||
Sbjct: 148 cgatgatggatagcg 134
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>ref|NM_188371.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1791

 Score =  206 bits (104), Expect = 7e-50
 Identities = 143/156 (91%)
 Strand = Plus / Minus

                                                                        
Query: 544  gaggccttgttcttggtattgaaataagatggagcagcagtggtgcctcccagtgtttca 603
            |||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1460 gaggccttgttcttgtcattgaaataagatggagcagcagtggtgcctcccagggtttca 1401

                                                                        
Query: 604  ttgaagggaaatgggagaaggcctcggaaaccgtcatctatccagcgaacttcactgata 663
            |||||||||||||| ||||| |||||||| || ||||||||||| | ||||||||| |||
Sbjct: 1400 ttgaagggaaatggaagaagccctcggaagccatcatctatccaccaaacttcactaata 1341

                                                
Query: 664  taggagggtacgaagaatgatgaaggatagcggtgc 699
            |||||||||| |||||| ||||| ||||||||||||
Sbjct: 1340 taggagggtatgaagaacgatgatggatagcggtgc 1305



 Score =  145 bits (73), Expect = 2e-31
 Identities = 187/225 (83%)
 Strand = Plus / Minus

                                                                        
Query: 305  cttggtcggtaggcagcctcctcagcaacttatacagcccgaaaacgttcttgtgctccc 364
            ||||||| |||||||||||||||||||  || ||||| || ||||| || || |||| ||
Sbjct: 1786 cttggtcagtaggcagcctcctcagcagtttgtacaggccaaaaacattgttttgctgcc 1727

                                                                        
Query: 365  attggtatggtatgaagaacgaccggtatagtgccggtgaaagctctctgtctagaaatg 424
            || |||  ||||||||||| |||||||||| ||| |||||||||||||| || ||||| |
Sbjct: 1726 atcggtgcggtatgaagaatgaccggtataatgcaggtgaaagctctctatccagaaagg 1667

                                                                        
Query: 425  gtagcgatgccaatgtctcccatgttgacaggtcgtttccacgagaggggtaaggccgcc 484
            | ||||  |||| |||||||||||| ||||  ||  |||| || || ||||||||||| |
Sbjct: 1666 gcagcgcagccagtgtctcccatgtcgacaaatcacttcctcgggatgggtaaggccgtc 1607

                                                         
Query: 485  tcagatcaagctccatcagtaagttgcatgctccaatgtctttca 529
            | |||||||| |||| ||||||| | ||||| |||||||||||||
Sbjct: 1606 taagatcaagttccaccagtaagctacatgccccaatgtctttca 1562
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  206 bits (104), Expect = 7e-50
 Identities = 143/156 (91%)
 Strand = Plus / Minus

                                                                           
Query: 544     gaggccttgttcttggtattgaaataagatggagcagcagtggtgcctcccagtgtttca 603
               |||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5915033 gaggccttgttcttgtcattgaaataagatggagcagcagtggtgcctcccagggtttca 5914974

                                                                           
Query: 604     ttgaagggaaatgggagaaggcctcggaaaccgtcatctatccagcgaacttcactgata 663
               |||||||||||||| ||||| |||||||| || ||||||||||| | ||||||||| |||
Sbjct: 5914973 ttgaagggaaatggaagaagccctcggaagccatcatctatccaccaaacttcactaata 5914914

                                                   
Query: 664     taggagggtacgaagaatgatgaaggatagcggtgc 699
               |||||||||| |||||| ||||| ||||||||||||
Sbjct: 5914913 taggagggtatgaagaacgatgatggatagcggtgc 5914878



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 100/118 (84%)
 Strand = Plus / Minus

                                                                           
Query: 305     cttggtcggtaggcagcctcctcagcaacttatacagcccgaaaacgttcttgtgctccc 364
               ||||||| |||||||||||||||||||  || ||||| || ||||| || || |||| ||
Sbjct: 5915447 cttggtcagtaggcagcctcctcagcagtttgtacaggccaaaaacattgttttgctgcc 5915388

                                                                         
Query: 365     attggtatggtatgaagaacgaccggtatagtgccggtgaaagctctctgtctagaaa 422
               || |||  ||||||||||| |||||||||| ||| |||||||||||||| || |||||
Sbjct: 5915387 atcggtgcggtatgaagaatgaccggtataatgcaggtgaaagctctctatccagaaa 5915330



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                         
Query: 472     gggtaaggccgcctcagatcaagctccatcagtaagttgcatgctccaatgtctttca 529
               ||||||||||| || |||||||| |||| ||||||| | ||||| |||||||||||||
Sbjct: 5915192 gggtaaggccgtctaagatcaagttccaccagtaagctacatgccccaatgtctttca 5915135
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>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0016I09
          Length = 148517

 Score =  206 bits (104), Expect = 7e-50
 Identities = 143/156 (91%)
 Strand = Plus / Minus

                                                                          
Query: 544    gaggccttgttcttggtattgaaataagatggagcagcagtggtgcctcccagtgtttca 603
              |||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 118774 gaggccttgttcttgtcattgaaataagatggagcagcagtggtgcctcccagggtttca 118715

                                                                          
Query: 604    ttgaagggaaatgggagaaggcctcggaaaccgtcatctatccagcgaacttcactgata 663
              |||||||||||||| ||||| |||||||| || ||||||||||| | ||||||||| |||
Sbjct: 118714 ttgaagggaaatggaagaagccctcggaagccatcatctatccaccaaacttcactaata 118655

                                                  
Query: 664    taggagggtacgaagaatgatgaaggatagcggtgc 699
              |||||||||| |||||| ||||| ||||||||||||
Sbjct: 118654 taggagggtatgaagaacgatgatggatagcggtgc 118619



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 100/118 (84%)
 Strand = Plus / Minus

                                                                          
Query: 305    cttggtcggtaggcagcctcctcagcaacttatacagcccgaaaacgttcttgtgctccc 364
              ||||||| |||||||||||||||||||  || ||||| || ||||| || || |||| ||
Sbjct: 119188 cttggtcagtaggcagcctcctcagcagtttgtacaggccaaaaacattgttttgctgcc 119129

                                                                        
Query: 365    attggtatggtatgaagaacgaccggtatagtgccggtgaaagctctctgtctagaaa 422
              || |||  ||||||||||| |||||||||| ||| |||||||||||||| || |||||
Sbjct: 119128 atcggtgcggtatgaagaatgaccggtataatgcaggtgaaagctctctatccagaaa 119071



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                        
Query: 472    gggtaaggccgcctcagatcaagctccatcagtaagttgcatgctccaatgtctttca 529
              ||||||||||| || |||||||| |||| ||||||| | ||||| |||||||||||||
Sbjct: 118933 gggtaaggccgtctaagatcaagttccaccagtaagctacatgccccaatgtctttca 118876
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>gb|AC105286.5| Homo sapiens BAC clone RP11-107L21 from 2, complete sequence
          Length = 109231

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 191  gaatgaaaatctagggaacaaaatt 215
            |||||||||| ||||||||||||||
Sbjct: 9659 gaatgaaaatatagggaacaaaatt 9635
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>gb|AY393092.1| Homo sapiens clone RA702-G5-25.fa immunoglobulin heavy chain mRNA,
           partial cds
          Length = 513

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 621 aaggcctcggaaaccgtcatctat 644
           ||||||||||| ||||||||||||
Sbjct: 292 aaggcctcggacaccgtcatctat 315
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>gb|BT012806.1| Lycopersicon esculentum clone 113825R, mRNA sequence
          Length = 1044

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 338 acagcccgaaaacgttcttg 357
           ||||||||||||||||||||
Sbjct: 377 acagcccgaaaacgttcttg 358
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>gb|AC118051.7| Mus musculus chromosome 1, clone RP24-430E15, complete sequence
          Length = 180197

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     tcattaacagtctcacagca 64
              ||||||||||||||||||||
Sbjct: 137614 tcattaacagtctcacagca 137633
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>ref|XM_384216.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04040.1)
            partial mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 538  ttgtcggaggccttgttcttggta 561
            ||||||| ||||||||||||||||
Sbjct: 2690 ttgtcggcggccttgttcttggta 2667
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>ref|XM_803030.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509149.70) partial mRNA
          Length = 1014

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 195 gaaaatctagggaacaaaat 214
           ||||||||||||||||||||
Sbjct: 44  gaaaatctagggaacaaaat 63
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>emb|Z81087.1|CEF53E4 Caenorhabditis elegans Cosmid F53E4, complete sequence
          Length = 16082

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 603   attgaagggaaatgggagaa 622
             ||||||||||||||||||||
Sbjct: 14238 attgaagggaaatgggagaa 14219
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>ref|XM_815891.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508175.300) partial mRNA
          Length = 1017

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 195 gaaaatctagggaacaaaat 214
           ||||||||||||||||||||
Sbjct: 44  gaaaatctagggaacaaaat 63
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>gb|AC123555.4| Mus musculus BAC clone RP23-139L20 from 1, complete sequence
          Length = 205623

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 54   gtctcacagcatcagtcagg 73
            ||||||||||||||||||||
Sbjct: 4056 gtctcacagcatcagtcagg 4075
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>gb|AC139728.3| Carollia perspicillata clone 29G20, complete sequence
          Length = 125364

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 519   aatgtctttcaaatattgct 538
             ||||||||||||||||||||
Sbjct: 27799 aatgtctttcaaatattgct 27818
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>gb|AC092897.6| Homo sapiens 3 BAC RP11-292P2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 127044

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   agtctacaaagcctacacac 146
             ||||||||||||||||||||
Sbjct: 58282 agtctacaaagcctacacac 58301
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>gb|AE005837.1| Caulobacter crescentus CB15 section 163 of 359 of the complete genome
          Length = 10846

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 539  tgtcggaggccttgttcttg 558
            ||||||||||||||||||||
Sbjct: 9049 tgtcggaggccttgttcttg 9068
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>gb|AC079329.15| Homo sapiens chromosome 11, clone RP11-265D17, complete sequence
          Length = 156540

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 591   tcccagtgtttcattgaagg 610
             ||||||||||||||||||||
Sbjct: 13966 tcccagtgtttcattgaagg 13985
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>gb|AC025106.8| Homo sapiens chromosome 11, clone RP11-734D5, complete sequence
          Length = 190779

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 591  tcccagtgtttcattgaagg 610
            ||||||||||||||||||||
Sbjct: 6923 tcccagtgtttcattgaagg 6904
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>dbj|AK081518.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130028L19 product:ral guanine nucleotide
            dissociation stimulator,-like 1, full insert sequence
          Length = 3201

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 45   tcattaacagtctcacagca 64
            ||||||||||||||||||||
Sbjct: 1595 tcattaacagtctcacagca 1614
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>emb|BX510913.9| Zebrafish DNA sequence from clone CH211-202D4 in linkage group 22,
              complete sequence
          Length = 203952

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 559    gtattgaaataagatggagc 578
              ||||||||||||||||||||
Sbjct: 180236 gtattgaaataagatggagc 180217
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>gb|AC130831.4| Mus musculus BAC clone RP24-80P9 from 14, complete sequence
          Length = 233804

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 550    ttgttcttggtattgaaata 569
              ||||||||||||||||||||
Sbjct: 199880 ttgttcttggtattgaaata 199861
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>gb|AC148007.3| Mus musculus BAC clone RP23-273G4 from 1, complete sequence
          Length = 184937

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     gtctcacagcatcagtcagg 73
              ||||||||||||||||||||
Sbjct: 109243 gtctcacagcatcagtcagg 109224
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>emb|AL772231.8| Mouse DNA sequence from clone RP23-398O7 on chromosome 4, complete
              sequence
          Length = 153653

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 406    agctctctgtctagaaatgg 425
              ||||||||||||||||||||
Sbjct: 120287 agctctctgtctagaaatgg 120268
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>gb|AC158992.2| Mus musculus BAC clone RP24-396L14 from chromosome 9, complete sequence
          Length = 163838

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 486   cagatcaagctccatcagta 505
             ||||||||||||||||||||
Sbjct: 63602 cagatcaagctccatcagta 63621
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>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 519    aatgtctttcaaatattgct 538
              ||||||||||||||||||||
Sbjct: 581141 aatgtctttcaaatattgct 581160


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,132,449
Number of Sequences: 3902068
Number of extensions: 5132449
Number of successful extensions: 89397
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89324
Number of HSP's gapped (non-prelim): 69
length of query: 699
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 676
effective length of database: 17,143,297,704
effective search space: 11588869247904
effective search space used: 11588869247904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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