| Clone Name | rbags7d19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119770.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-F01, full insert sequence Length = 2370 Score = 383 bits (193), Expect = e-103 Identities = 325/369 (88%) Strand = Plus / Minus Query: 181 aaagctcatttctttctcccaccacgctccctcagagctagattgatgaccaccccgggg 240 ||||||||||||||||||||||||||||||||||| | || |||||| ||||| || ||| Sbjct: 2208 aaagctcatttctttctcccaccacgctccctcagtgttaaattgatcaccactccaggg 2149 Query: 241 ccaacattgtaataggcaagagaaagattgtccttgaggaaactagtcctcacactcagc 300 |||| ||||| || ||||||| |||||||| |||||||||||||||| ||| |||| | Sbjct: 2148 ccaatgttgtagtaagcaagagtgagattgtctttgaggaaactagtccgcacgctcaac 2089 Query: 301 ttctgcttattagcaggaagctgcagctctccagcaacctgctccttcaggctgccaatt 360 ||||||||||||||||| ||||||| ||||||||||| ||||||||| || ||||||| | Sbjct: 2088 ttctgcttattagcagggagctgcaactctccagcaatctgctcctttagactgccaact 2029 Query: 361 gtgtctgagagtgattggacagagatctccaaaacttggcctcgcaagtttccttcatcc 420 ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||| Sbjct: 2028 gtgtctgagagtgattggacaccgatctccaacacttggcctcgcaggtttccttcatca 1969 Query: 421 aggttgggcacagaaactgatatgcgagcagggcccggatgctgagcaaggaattgctca 480 |||||||| ||||| ||||| ||| ||||||||||||| |||||||||||||| || || Sbjct: 1968 aggttgggtacagacactgagatgtgagcagggcccgggtgctgagcaaggaactgttct 1909 Query: 481 gctgggatcaaagatgcatcatctgttctctgcctcttaggttctggttcctcaggtaga 540 ||||| || | ||| || |||||||||||| |||| |||||||||||||| |||||| || Sbjct: 1908 gctggtataagagaagcgtcatctgttctcagccttttaggttctggttcatcaggttga 1849 Query: 541 ggtggctgc 549 ||||||||| Sbjct: 1848 ggtggctgc 1840
>dbj|AK119874.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-E06, full insert sequence Length = 2578 Score = 383 bits (193), Expect = e-103 Identities = 325/369 (88%) Strand = Plus / Minus Query: 181 aaagctcatttctttctcccaccacgctccctcagagctagattgatgaccaccccgggg 240 ||||||||||||||||||||||||||||||||||| | || |||||| ||||| || ||| Sbjct: 2408 aaagctcatttctttctcccaccacgctccctcagtgttaaattgatcaccactccaggg 2349 Query: 241 ccaacattgtaataggcaagagaaagattgtccttgaggaaactagtcctcacactcagc 300 |||| ||||| || ||||||| |||||||| |||||||||||||||| ||| |||| | Sbjct: 2348 ccaatgttgtagtaagcaagagtgagattgtctttgaggaaactagtccgcacgctcaac 2289 Query: 301 ttctgcttattagcaggaagctgcagctctccagcaacctgctccttcaggctgccaatt 360 ||||||||||||||||| ||||||| ||||||||||| ||||||||| || ||||||| | Sbjct: 2288 ttctgcttattagcagggagctgcaactctccagcaatctgctcctttagactgccaact 2229 Query: 361 gtgtctgagagtgattggacagagatctccaaaacttggcctcgcaagtttccttcatcc 420 ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||| Sbjct: 2228 gtgtctgagagtgattggacaccgatctccaacacttggcctcgcaggtttccttcatca 2169 Query: 421 aggttgggcacagaaactgatatgcgagcagggcccggatgctgagcaaggaattgctca 480 |||||||| ||||| ||||| ||| ||||||||||||| |||||||||||||| || || Sbjct: 2168 aggttgggtacagacactgagatgtgagcagggcccgggtgctgagcaaggaactgttct 2109 Query: 481 gctgggatcaaagatgcatcatctgttctctgcctcttaggttctggttcctcaggtaga 540 ||||| || | ||| || |||||||||||| |||| |||||||||||||| |||||| || Sbjct: 2108 gctggtataagagaagcgtcatctgttctcagccttttaggttctggttcatcaggtcga 2049 Query: 541 ggtggctgc 549 ||||||||| Sbjct: 2048 ggtggctgc 2040
>gb|AY105256.1| Zea mays PCO065087 mRNA sequence Length = 613 Score = 361 bits (182), Expect = 2e-96 Identities = 305/346 (88%) Strand = Plus / Minus Query: 185 ctcatttctttctcccaccacgctccctcagagctagattgatgaccaccccggggccaa 244 |||||||||||||||||||||||||||| || | ||||||||| ||||| || || || | Sbjct: 608 ctcatttctttctcccaccacgctcccttagtgttagattgatcaccactccaggaccca 549 Query: 245 cattgtaataggcaagagaaagattgtccttgaggaaactagtcctcacactcagcttct 304 ||||||| || ||||||| ||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 548 cattgtagtaagcaagagtaaggttgtctttgaggaaactagtcctcacactcagcttct 489 Query: 305 gcttattagcaggaagctgcagctctccagcaacctgctccttcaggctgccaattgtgt 364 ||||||||||||| ||||| | ||||||||||| |||||||||||| || |||| ||||| Sbjct: 488 gcttattagcagggagctgtaactctccagcaatctgctccttcagactaccaactgtgt 429 Query: 365 ctgagagtgattggacagagatctccaaaacttggcctcgcaagtttccttcatccaggt 424 |||| |||||||| |||| |||| ||||||||||||||||||||| |||||||| |||| Sbjct: 428 ctgacagtgattgaacaggaatctgcaaaacttggcctcgcaagttcccttcatcgaggt 369 Query: 425 tgggcacagaaactgatatgcgagcagggcccggatgctgagcaaggaattgctcagctg 484 |||| ||||| || || |||| |||||| ||| |||||||||||||||| |||||||||| Sbjct: 368 tgggtacagatacagagatgctagcaggaccctgatgctgagcaaggaactgctcagctg 309 Query: 485 ggatcaaagatgcatcatctgttctctgcctcttaggttctggttc 530 |||| | ||| |||| ||||||||||||||||||||||| ||||| Sbjct: 308 ggataagagaaccatcgtctgttctctgcctcttaggttcgggttc 263
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 301 bits (152), Expect = 1e-78 Identities = 245/276 (88%) Strand = Plus / Minus Query: 181 aaagctcatttctttctcccaccacgctccctcagagctagattgatgaccaccccgggg 240 ||||||||||||||||||||||||||||||||||| | || |||||| ||||| || ||| Sbjct: 8198655 aaagctcatttctttctcccaccacgctccctcagtgttaaattgatcaccactccaggg 8198596 Query: 241 ccaacattgtaataggcaagagaaagattgtccttgaggaaactagtcctcacactcagc 300 |||| ||||| || ||||||| |||||||| |||||||||||||||| ||| |||| | Sbjct: 8198595 ccaatgttgtagtaagcaagagtgagattgtctttgaggaaactagtccgcacgctcaac 8198536 Query: 301 ttctgcttattagcaggaagctgcagctctccagcaacctgctccttcaggctgccaatt 360 ||||||||||||||||| ||||||| ||||||||||| ||||||||| || ||||||| | Sbjct: 8198535 ttctgcttattagcagggagctgcaactctccagcaatctgctcctttagactgccaact 8198476 Query: 361 gtgtctgagagtgattggacagagatctccaaaacttggcctcgcaagtttccttcatcc 420 ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||| Sbjct: 8198475 gtgtctgagagtgattggacaccgatctccaacacttggcctcgcaggtttccttcatca 8198416 Query: 421 aggttgggcacagaaactgatatgcgagcagggccc 456 |||||||| ||||| ||||| ||| ||||||||||| Sbjct: 8198415 aggttgggtacagacactgagatgtgagcagggccc 8198380 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 455 ccggatgctgagcaaggaattgctcagctgggatcaaagatgcatcatctgttctctgcc 514 |||| |||||||||||||| || || ||||| || | ||| || |||||||||||| ||| Sbjct: 8198249 ccgggtgctgagcaaggaactgttctgctggtataagagaagcgtcatctgttctcagcc 8198190 Query: 515 tcttaggttctggttcctcaggtagaggtggctgc 549 | |||||||||||||| |||||| ||||||||||| Sbjct: 8198189 ttttaggttctggttcatcaggttgaggtggctgc 8198155
>dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_F06 Length = 130968 Score = 301 bits (152), Expect = 1e-78 Identities = 245/276 (88%) Strand = Plus / Minus Query: 181 aaagctcatttctttctcccaccacgctccctcagagctagattgatgaccaccccgggg 240 ||||||||||||||||||||||||||||||||||| | || |||||| ||||| || ||| Sbjct: 30801 aaagctcatttctttctcccaccacgctccctcagtgttaaattgatcaccactccaggg 30742 Query: 241 ccaacattgtaataggcaagagaaagattgtccttgaggaaactagtcctcacactcagc 300 |||| ||||| || ||||||| |||||||| |||||||||||||||| ||| |||| | Sbjct: 30741 ccaatgttgtagtaagcaagagtgagattgtctttgaggaaactagtccgcacgctcaac 30682 Query: 301 ttctgcttattagcaggaagctgcagctctccagcaacctgctccttcaggctgccaatt 360 ||||||||||||||||| ||||||| ||||||||||| ||||||||| || ||||||| | Sbjct: 30681 ttctgcttattagcagggagctgcaactctccagcaatctgctcctttagactgccaact 30622 Query: 361 gtgtctgagagtgattggacagagatctccaaaacttggcctcgcaagtttccttcatcc 420 ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||| Sbjct: 30621 gtgtctgagagtgattggacaccgatctccaacacttggcctcgcaggtttccttcatca 30562 Query: 421 aggttgggcacagaaactgatatgcgagcagggccc 456 |||||||| ||||| ||||| ||| ||||||||||| Sbjct: 30561 aggttgggtacagacactgagatgtgagcagggccc 30526 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 455 ccggatgctgagcaaggaattgctcagctgggatcaaagatgcatcatctgttctctgcc 514 |||| |||||||||||||| || || ||||| || | ||| || |||||||||||| ||| Sbjct: 30395 ccgggtgctgagcaaggaactgttctgctggtataagagaagcgtcatctgttctcagcc 30336 Query: 515 tcttaggttctggttcctcaggtagaggtggctgc 549 | |||||||||||||| |||||| ||||||||||| Sbjct: 30335 ttttaggttctggttcatcaggttgaggtggctgc 30301
>emb|AL023775.1|HS497J21 Human DNA sequence from clone RP3-497J21 on chromosome 6q26-27 Contains part of a variant of the RPS6KA2 gene for ribosomal protein S6 kinase, 90kD, polypeptide 2 (RSK3) and a IGF-II mRNA-binding protein 3 (KOC1) pseudogene, complete sequence Length = 129432 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 183 agctcatttctttctcccaccac 205 ||||||||||||||||||||||| Sbjct: 7362 agctcatttctttctcccaccac 7384
>gb|AF019664.1|AF019664 Homo sapiens cosmids 52b3, 189g5, ICRFc109N244QD2, P1 255h6, and PAC pDJ84g15 from chromosome 6q27 encompassing markers D6S193 and D6S297, complete sequence Length = 68940 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 183 agctcatttctttctcccaccac 205 ||||||||||||||||||||||| Sbjct: 12388 agctcatttctttctcccaccac 12366
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 tataaaacacataatacaagaa 90 |||||||||||||||||||||| Sbjct: 1950061 tataaaacacataatacaagaa 1950082
>gb|AC183335.3| Callithrix jacchus clone CH259-203J20, complete sequence Length = 54149 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 tataaaacacataatacaagaa 90 |||||||||||||||||||||| Sbjct: 3487 tataaaacacataatacaagaa 3508
>gb|AC146674.3| Callithrix jacchus clone CH259-338M13, complete sequence Length = 228448 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 tataaaacacataatacaagaa 90 |||||||||||||||||||||| Sbjct: 226106 tataaaacacataatacaagaa 226127
>gb|AY621040.1|AY621038S3 Pan troglodytes tafazzin (TAZ) gene, exons 6 through 11 and complete cds Length = 1578 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1551 caagaatccagaaggcagcaa 1531
>gb|AY621049.1|AY621047S3 Hylobates sp. IGL-2004 tafazzin (TAZ) gene, exons 6 through 11 and complete cds Length = 1539 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1526 caagaatccagaaggcagcaa 1506
>gb|AY621046.1|AY621044S3 Pongo pygmaeus tafazzin (TAZ) gene, exons 6 through 11 and complete cds Length = 1554 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1524 caagaatccagaaggcagcaa 1504
>gb|AY621043.1|AY621041S3 Gorilla gorilla tafazzin (TAZ) gene, exons 6 through 11 and complete cds Length = 1588 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1572 caagaatccagaaggcagcaa 1552
>gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosome 13, complete sequence Length = 192473 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 catttctttctcccaccacgc 207 ||||||||||||||||||||| Sbjct: 20305 catttctttctcccaccacgc 20285
>gb|AC005102.1| Homo sapiens BAC clone CTA-356E1 from 7, complete sequence Length = 106508 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 acaagaatccagaaggcagca 104 ||||||||||||||||||||| Sbjct: 19291 acaagaatccagaaggcagca 19271
>gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete sequence Length = 107448 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 509 tctgcctcttaggttctggttcctc 533 |||||||||| |||||||||||||| Sbjct: 26951 tctgcctcttcggttctggttcctc 26975
>emb|BX936347.3| Human DNA sequence from clone WI2-83563B9 on chromosome X Contains the 3' end of the RPL10 gene for ribosomal protein L10, the DNASE1L1 gene for deoxyribonuclease I-like 1, the TAZ gene for tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome), the 5' end of the ATP6AP1 gene for H+ transporting ATPase lysosomal accessory protein 1 and two CpG islands, complete sequence Length = 37440 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 23603 caagaatccagaaggcagcaa 23583
>gb|BC011515.1| Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome), mRNA (cDNA clone MGC:17101 IMAGE:4339983), complete cds Length = 1662 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 914 caagaatccagaaggcagcaa 894
>gb|BC005062.1| Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome), transcript variant 5, mRNA (cDNA clone IMAGE:3342887), complete cds Length = 1914 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1206 caagaatccagaaggcagcaa 1186
>gb|DQ397875.1| Cenarchaeum symbiosum clone C07F02, complete sequence Length = 41724 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 184 gctcatttctttctcccaccacgct 208 ||||| ||||||||||||||||||| Sbjct: 5341 gctcagttctttctcccaccacgct 5317
>gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete sequence Length = 99712 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 509 tctgcctcttaggttctggttcctc 533 |||||||||| |||||||||||||| Sbjct: 16468 tctgcctcttcggttctggttcctc 16492
>emb|CR625532.1| full-length cDNA clone CS0DM002YI01 of Fetal liver of Homo sapiens (human) Length = 2225 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1597 caagaatccagaaggcagcaa 1577
>emb|CR625491.1| full-length cDNA clone CS0DL002YB20 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1677 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1016 caagaatccagaaggcagcaa 996
>emb|CR625386.1| full-length cDNA clone CS0DJ007YG17 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1739 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1065 caagaatccagaaggcagcaa 1045
>emb|CR616010.1| full-length cDNA clone CS0DL008YM06 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1755 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1101 caagaatccagaaggcagcaa 1081
>emb|CR606274.1| full-length cDNA clone CS0DC001YP13 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1762 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1101 caagaatccagaaggcagcaa 1081
>emb|CR600372.1| full-length cDNA clone CS0DK004YF20 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1781 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1105 caagaatccagaaggcagcaa 1085
>emb|CR599136.1| full-length cDNA clone CS0DL007YP17 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1722 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1061 caagaatccagaaggcagcaa 1041
>emb|CR596174.1| full-length cDNA clone CS0DK011YJ18 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1615 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 942 caagaatccagaaggcagcaa 922
>emb|CR590626.1| full-length cDNA clone CS0DB005YK23 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1668 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1007 caagaatccagaaggcagcaa 987
>ref|NM_181311.1| Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome) (TAZ), transcript variant 2, mRNA Length = 1814 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1120 caagaatccagaaggcagcaa 1100
>ref|NM_181312.1| Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome) (TAZ), transcript variant 3, mRNA Length = 1862 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1168 caagaatccagaaggcagcaa 1148
>ref|NM_181313.1| Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome) (TAZ), transcript variant 4, mRNA Length = 1772 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1078 caagaatccagaaggcagcaa 1058
>ref|NM_181314.1| Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome) (TAZ), transcript variant 5, mRNA Length = 1934 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1226 caagaatccagaaggcagcaa 1206
>ref|NM_000116.2| Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome) (TAZ), transcript variant 1, mRNA Length = 1904 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1210 caagaatccagaaggcagcaa 1190
>dbj|AK130900.1| Homo sapiens cDNA FLJ27390 fis, clone WMC00650, highly similar to Tafazzin Length = 2286 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1596 caagaatccagaaggcagcaa 1576
>gb|AC154631.2| Mus musculus BAC clone RP23-264F8 from 16, complete sequence Length = 201820 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 507 tctctgcctcttaggttctgg 527 ||||||||||||||||||||| Sbjct: 110150 tctctgcctcttaggttctgg 110130
>gb|L44140.1|HUMFLNG6PD Homo sapiens chromosome X region from filamin (FLN) gene to glucose-6-phosphate dehydrogenase (G6PD) gene, complete cds's Length = 219447 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 91462 caagaatccagaaggcagcaa 91442
>emb|CR954185.2| Medicago truncatula chromosome 5 clone mth4-20m5, COMPLETE SEQUENCE Length = 210708 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 taaaacacataatacaagaatccag 95 |||||||||||||| |||||||||| Sbjct: 180727 taaaacacataataaaagaatccag 180751
>emb|AL121576.5|CNS01DRW Human chromosome 14 DNA sequence BAC R-476J6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 221004 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 atgatagccactgaagttttg 144 ||||||||||||||||||||| Sbjct: 173650 atgatagccactgaagttttg 173630
>emb|X92764.1|HSG45611 H.sapiens G4.5 gene (exons 6-11) Length = 2307 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1619 caagaatccagaaggcagcaa 1599
>emb|X92762.1|HSRNATAF H.sapiens mRNA for tafazzins protein Length = 1883 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 caagaatccagaaggcagcaa 105 ||||||||||||||||||||| Sbjct: 1195 caagaatccagaaggcagcaa 1175
>ref|NM_101332.3| Arabidopsis thaliana RNA binding AT1G14650 mRNA, complete cds Length = 2789 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 tctttctcccaccacgctccctca 214 |||||||||||||||| ||||||| Sbjct: 2512 tctttctcccaccacgttccctca 2489
>gb|AC158537.2| Mus musculus BAC clone RP23-2H7 from chromosome 14, complete sequence Length = 204554 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 agtcctcacactcagcttctgctt 308 |||||||| ||||||||||||||| Sbjct: 55627 agtcctcaaactcagcttctgctt 55604
>gb|AC154354.2| Mus musculus BAC clone RP23-203C5 from chromosome 14, complete sequence Length = 238278 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 agtcctcacactcagcttctgctt 308 |||||||| ||||||||||||||| Sbjct: 234519 agtcctcaaactcagcttctgctt 234496
>ref|NM_001039386.1| Mus musculus nasal embryonic LHRH factor (Nelf), transcript variant 1, mRNA Length = 2949 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cctcaggtagaggtggctgc 549 |||||||||||||||||||| Sbjct: 802 cctcaggtagaggtggctgc 783
>ref|NM_001039387.1| Mus musculus nasal embryonic LHRH factor (Nelf), transcript variant 2, mRNA Length = 2943 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cctcaggtagaggtggctgc 549 |||||||||||||||||||| Sbjct: 802 cctcaggtagaggtggctgc 783
>ref|NM_020276.3| Mus musculus nasal embryonic LHRH factor (Nelf), transcript variant 3, mRNA Length = 2880 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cctcaggtagaggtggctgc 549 |||||||||||||||||||| Sbjct: 802 cctcaggtagaggtggctgc 783
>ref|XM_677012.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8835.2), mRNA Length = 3930 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tttctttctcccaccacgct 208 |||||||||||||||||||| Sbjct: 2635 tttctttctcccaccacgct 2654
>gb|AC132297.4| Mus musculus chromosome 7 clone RP24-330M18, complete sequence Length = 152941 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 aggaagctgcagctctccag 334 |||||||||||||||||||| Sbjct: 138256 aggaagctgcagctctccag 138237
>ref|XM_548526.2| PREDICTED: Canis familiaris similar to immunoglobulin iota chain preproprotein (LOC491405), mRNA Length = 660 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ttagcaggaagctgcagctc 329 |||||||||||||||||||| Sbjct: 584 ttagcaggaagctgcagctc 565
>emb|CR382284.13| Zebrafish DNA sequence from clone DKEY-95H16 in linkage group 8, complete sequence Length = 205882 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 cacactcagcttctgcttat 310 |||||||||||||||||||| Sbjct: 47563 cacactcagcttctgcttat 47582
>gb|AC123926.4| Mus musculus BAC clone RP24-326N11 from chromosome 16, complete sequence Length = 148820 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 gcttattagcaggaagctgcagct 328 ||||| |||||||||||||||||| Sbjct: 43592 gcttaatagcaggaagctgcagct 43569
>gb|AC124403.3| Mus musculus BAC clone RP24-369I6 from chromosome 16, complete sequence Length = 159138 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 gcttattagcaggaagctgcagct 328 ||||| |||||||||||||||||| Sbjct: 152833 gcttaatagcaggaagctgcagct 152810
>gb|AC124715.4| Mus musculus BAC clone RP24-130P22 from chromosome 14, complete sequence Length = 178742 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 gaagctgcagctctccagca 336 |||||||||||||||||||| Sbjct: 122087 gaagctgcagctctccagca 122106
>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence Length = 223991 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 agagaaagattgtccttgag 278 |||||||||||||||||||| Sbjct: 116685 agagaaagattgtccttgag 116704
>gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete sequence Length = 227968 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 aggaagctgcagctctccag 334 |||||||||||||||||||| Sbjct: 94540 aggaagctgcagctctccag 94559
>gb|AC110221.6| Mus musculus chromosome 3, clone RP24-567P14, complete sequence Length = 138203 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 acagagatctccaaaacttg 398 |||||||||||||||||||| Sbjct: 44242 acagagatctccaaaacttg 44223
>gb|BC006642.1| Mus musculus nasal embryonic LHRH factor, transcript variant 2, mRNA (cDNA clone MGC:7230 IMAGE:3483536), complete cds Length = 2949 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cctcaggtagaggtggctgc 549 |||||||||||||||||||| Sbjct: 760 cctcaggtagaggtggctgc 741
>emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chromosome 1, complete sequence Length = 129844 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 495 tgcatcatctgttctctgcctctt 518 ||||||||||||||||||| |||| Sbjct: 59504 tgcatcatctgttctctgcatctt 59481
>gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence Length = 208207 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cctcaggtagaggtggctgc 549 |||||||||||||||||||| Sbjct: 13047 cctcaggtagaggtggctgc 13028
>emb|AL356111.13| Human DNA sequence from clone RP11-501G6 on chromosome 13 Contains a novel gene, complete sequence Length = 150955 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 agcattgtcctgtaagtaaa 169 |||||||||||||||||||| Sbjct: 13058 agcattgtcctgtaagtaaa 13077
>gb|AC135204.3| Rattus norvegicus 1 BAC CH230-381D2 (Children's Hospital Oakland Research Institute) complete sequence Length = 183322 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 atctgttctctgcctcttag 520 |||||||||||||||||||| Sbjct: 76862 atctgttctctgcctcttag 76881
>emb|AL031178.1|HS341E18 Human DNA sequence from clone RP3-341E18 on chromosome 6p11.2-12.3 Contains the KIAA0936 gene for a MAK-related kinase, a novel gene for NY-REN-57 antigen and CpG islands, complete sequence Length = 92558 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 ttcatccaggttgggcacag 433 |||||||||||||||||||| Sbjct: 8969 ttcatccaggttgggcacag 8950
>gb|AC018664.11| Homo sapiens chromosome 7 clone RP11-109E9, complete sequence Length = 114848 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 ctcatttctttctcccacca 204 |||||||||||||||||||| Sbjct: 29044 ctcatttctttctcccacca 29025
>emb|Y08028.1|MMART5 M.musculus ART5 gene Length = 984 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 aggaagctgcagctctccag 334 |||||||||||||||||||| Sbjct: 897 aggaagctgcagctctccag 916
>emb|AJ297548.1|MMU297548 Mus musculus mRNA for mono(ADP ribosyl)transferase (Art5 gene), splice variant 2 Length = 636 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 aggaagctgcagctctccag 334 |||||||||||||||||||| Sbjct: 604 aggaagctgcagctctccag 623
>emb|AJ297547.1|MMU297547 Mus musculus mRNA for mono(ADP ribosyl)transferase (Art5 gene), splice variant 1 Length = 495 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 aggaagctgcagctctccag 334 |||||||||||||||||||| Sbjct: 463 aggaagctgcagctctccag 482
>emb|AJ295722.1|MSP295722 Mus musculus Art5 gene for mono ADP ribosyl transferase, exons 1-6 Length = 2461 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 aggaagctgcagctctccag 334 |||||||||||||||||||| Sbjct: 2142 aggaagctgcagctctccag 2161
>emb|BX927104.11| Zebrafish DNA sequence from clone CH211-210P22 in linkage group 17, complete sequence Length = 146265 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 catagtgcaaattatagtgc 62 |||||||||||||||||||| Sbjct: 58388 catagtgcaaattatagtgc 58369
>emb|BX957247.4| Zebrafish DNA sequence from clone DKEYP-117H10 in linkage group 23, complete sequence Length = 166306 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 aactgagataagaaaagctcatttcttt 195 |||||| ||||||||| ||||||||||| Sbjct: 150991 aactgaaataagaaaacctcatttcttt 150964
>emb|BX005275.25| Zebrafish DNA sequence from clone DKEY-118J18 in linkage group 24, complete sequence Length = 174489 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 cacactcagcttctgcttat 310 |||||||||||||||||||| Sbjct: 39240 cacactcagcttctgcttat 39221
>gb|AY081293.1| Arabidopsis thaliana splicing factor, putative (At1g14650) mRNA, complete cds Length = 2740 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 tctttctcccaccacgctccctca 214 |||||||||||||||| ||||||| Sbjct: 2477 tctttctcccaccacgttccctca 2454
>dbj|AK132854.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930443I07 product:ADP-ribosyltransferase 5, full insert sequence Length = 1714 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 aggaagctgcagctctccag 334 |||||||||||||||||||| Sbjct: 1448 aggaagctgcagctctccag 1467
>dbj|AK158803.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K430328A15 product:nasal embryonic LHRH factor, full insert sequence Length = 2662 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cctcaggtagaggtggctgc 549 |||||||||||||||||||| Sbjct: 601 cctcaggtagaggtggctgc 582
>dbj|AK165300.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430011A19 product:nasal embryonic LHRH factor, full insert sequence Length = 2863 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cctcaggtagaggtggctgc 549 |||||||||||||||||||| Sbjct: 747 cctcaggtagaggtggctgc 728
>dbj|AK019560.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930404B01 product:nasal embryonic LHRH factor, full insert sequence Length = 2129 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cctcaggtagaggtggctgc 549 |||||||||||||||||||| Sbjct: 769 cctcaggtagaggtggctgc 750
>dbj|AK045384.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230112A04 product:nasal embryonic LHRH factor, full insert sequence Length = 4607 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cctcaggtagaggtggctgc 549 |||||||||||||||||||| Sbjct: 797 cctcaggtagaggtggctgc 778
>dbj|AK004986.2| Mus musculus adult male liver cDNA, RIKEN full-length enriched library, clone:1300013E15 product:nasal embryonic LHRH factor, full insert sequence Length = 2923 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cctcaggtagaggtggctgc 549 |||||||||||||||||||| Sbjct: 799 cctcaggtagaggtggctgc 780
>dbj|AK041478.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630014A09 product:nasal embryonic LHRH factor, full insert sequence Length = 1571 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cctcaggtagaggtggctgc 549 |||||||||||||||||||| Sbjct: 779 cctcaggtagaggtggctgc 760
>dbj|AK053402.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130014F11 product:NASAL EMBRYONIC LHRH FACTOR homolog [Mus musculus], full insert sequence Length = 2783 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cctcaggtagaggtggctgc 549 |||||||||||||||||||| Sbjct: 749 cctcaggtagaggtggctgc 730
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ttctttctcccaccacgctc 209 |||||||||||||||||||| Sbjct: 3605106 ttctttctcccaccacgctc 3605125
>emb|BX816195.1|CNS0AEGC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH33ZF08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1609 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 ctcacactcagcttctgctt 308 |||||||||||||||||||| Sbjct: 798 ctcacactcagcttctgctt 779
>gb|AC010657.3|AC010657 Genomic sequence for Arabidopsis thaliana BAC T5E21 from chromosome I, complete sequence Length = 83351 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 tctttctcccaccacgctccctca 214 |||||||||||||||| ||||||| Sbjct: 67987 tctttctcccaccacgttccctca 67964
>gb|AF266508.2|AF266508 Mus musculus NELF protein mRNA, complete cds Length = 2828 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cctcaggtagaggtggctgc 549 |||||||||||||||||||| Sbjct: 768 cctcaggtagaggtggctgc 749
>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1641_C04 Length = 134367 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ttctttctcccaccacgctc 209 |||||||||||||||||||| Sbjct: 74423 ttctttctcccaccacgctc 74442
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ttctttctcccaccacgctc 209 |||||||||||||||||||| Sbjct: 143056 ttctttctcccaccacgctc 143075
>emb|AL132711.5|CNS01DTC Human chromosome 14 DNA sequence BAC R-566J3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 185799 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ttctgcttattagcaggaag 320 |||||||||||||||||||| Sbjct: 148625 ttctgcttattagcaggaag 148644
>gb|U60881.1|MMU60881 Mus musculus Yac-2 NAD:arginine ADP-ribosyltransferase mRNA, complete cds Length = 1547 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 aggaagctgcagctctccag 334 |||||||||||||||||||| Sbjct: 1280 aggaagctgcagctctccag 1299
>ref|NM_007491.1| Mus musculus ADP-ribosyltransferase 5 (Art5), mRNA Length = 1849 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 aggaagctgcagctctccag 334 |||||||||||||||||||| Sbjct: 1584 aggaagctgcagctctccag 1603
>dbj|AP004973.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT41A07, TM0155b, complete sequence Length = 52067 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gtccttgaggaaactagtcc 289 |||||||||||||||||||| Sbjct: 2621 gtccttgaggaaactagtcc 2640
>emb|AJ278902.1|MMU278902 Mus musculus mRNA for Jacob protein (jac gene) Length = 1599 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cctcaggtagaggtggctgc 549 |||||||||||||||||||| Sbjct: 580 cctcaggtagaggtggctgc 561
>emb|AL732585.8| Mouse DNA sequence from clone RP23-226M2 on chromosome 2, complete sequence Length = 151891 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cctcaggtagaggtggctgc 549 |||||||||||||||||||| Sbjct: 98605 cctcaggtagaggtggctgc 98586 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,121,300 Number of Sequences: 3902068 Number of extensions: 6121300 Number of successful extensions: 122401 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 122153 Number of HSP's gapped (non-prelim): 248 length of query: 550 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 527 effective length of database: 17,143,297,704 effective search space: 9034517890008 effective search space used: 9034517890008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)