| Clone Name | rbags6o18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-) | 31 | 2.5 | 2 | Y449_MYCGE (P47687) Hypothetical protein MG449 | 30 | 5.5 | 3 | CDK2_MOUSE (P97377) Cell division protein kinase 2 (EC 2.7.11.22) | 29 | 9.4 |
|---|
>ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-)| Length = 458 Score = 31.2 bits (69), Expect = 2.5 Identities = 13/32 (40%), Positives = 14/32 (43%) Frame = +3 Query: 474 CNVYEYSDGCYTWKTEVLICSDLTIMACCHDH 569 C +YEY CY W C L CC DH Sbjct: 380 CCIYEYGKYCYAWG-----CCPLEGATCCDDH 406
>Y449_MYCGE (P47687) Hypothetical protein MG449| Length = 228 Score = 30.0 bits (66), Expect = 5.5 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +3 Query: 351 MLVEDSEI-LKQAHQGATSVNPSMLCNSPVISIYVHK 458 ML + E+ LKQ ++G +NP + P I +Y++K Sbjct: 177 MLCSEKELNLKQKNEGIIEINPKIKVGKPFIDVYLNK 213
>CDK2_MOUSE (P97377) Cell division protein kinase 2 (EC 2.7.11.22)| Length = 346 Score = 29.3 bits (64), Expect = 9.4 Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 19/132 (14%) Frame = +3 Query: 252 SNQLTGVTLGLHFHVQFRVNE----CHTES---K*LRPDNMLVEDSEILKQAHQGATSVN 410 ++ LTG+ L L F++ + CH+ + L+P N+L+ +K A G Sbjct: 93 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLARAF 152 Query: 411 PSMLCNSPVISIYVHKTIVLQCNVYEYSDGCYTWKTEVLICSDLTIMA------------ 554 + Y H+ + L E GC + T V I S I A Sbjct: 153 ------GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMHLVCTQHHAK 206 Query: 555 CCHDHQAPGRRT 590 CC +H+ GR + Sbjct: 207 CCGEHRRNGRHS 218 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,472,852 Number of Sequences: 219361 Number of extensions: 1594230 Number of successful extensions: 3267 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3211 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3267 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)