ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags7d15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK071255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086C22, full insert sequence Length = 1660 Score = 349 bits (176), Expect = 7e-93 Identities = 313/356 (87%), Gaps = 2/356 (0%) Strand = Plus / Minus Query: 266 aaaacaacaaagatttgaatagaatggaagaaatgttttgacactcgtggctgccatt-t 324 ||||||||||||||||||||||||||||| ||| |||||||||||| | | ||||| | | Sbjct: 1367 aaaacaacaaagatttgaatagaatggaataaacgttttgacactccttgttgccaatgt 1308 Query: 325 cccttgtgcatatgatattaatagtctacctgcacagaagttgactaagggctagctgac 384 ||||| |||||||||||| ||||||||||||| ||| | | ||||||| |||||||| Sbjct: 1307 cccttatgcatatgatat-aatagtctacctggacaaatatccactaaggactagctgat 1249 Query: 385 agaatcctccggaacaactgaatcctgaataacacgatctgggtccaattgaccactgta 444 || |||||||| ||| ||||||||||| ||||||||| || |||| ||||||||||| Sbjct: 1248 tgagtcctccgggacacttgaatcctgaagaacacgatcaggatccagctgaccactgta 1189 Query: 445 ataactagacggaactgcagatagttccaattttccagtccactcctcgccaggcttcag 504 ||| ||||| || || ||||| |||||||| ||||||||||||||||| |||||||||| Sbjct: 1188 atagctagatgggacagcagacagttccaactttccagtccactcctcaccaggcttcaa 1129 Query: 505 agtaatcggcttttctatagcagctgcttccacacataccatgcgtttatattcgtcatc 564 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 1128 agtaatcggcttttctatagcagctgcctccacacagaccatgcgtttatattcgtcatc 1069 Query: 565 cccaaaatctgccattgccttagcttttttgtcccaggggttccaaacaacagcat 620 |||||| |||| ||| |||||||| || |||||||| ||||||||||||||||||| Sbjct: 1068 cccaaagtctgacatagccttagccttcttgtcccaagggttccaaacaacagcat 1013
>dbj|AK068928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170O13, full insert sequence Length = 3699 Score = 280 bits (141), Expect = 5e-72 Identities = 225/253 (88%) Strand = Plus / Minus Query: 368 actaagggctagctgacagaatcctccggaacaactgaatcctgaataacacgatctggg 427 ||||||| |||||||| || |||||||| ||| ||||||||||| ||||||||| || Sbjct: 1920 actaaggactagctgattgagtcctccgggacacttgaatcctgaagaacacgatcagga 1861 Query: 428 tccaattgaccactgtaataactagacggaactgcagatagttccaattttccagtccac 487 |||| |||||||||||||| ||||| || || ||||| |||||||| |||||||||||| Sbjct: 1860 tccagctgaccactgtaatagctagatgggacagcagacagttccaactttccagtccac 1801 Query: 488 tcctcgccaggcttcagagtaatcggcttttctatagcagctgcttccacacataccatg 547 ||||| |||||||||| ||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 1800 tcctcaccaggcttcaaagtaatcggcttttctatagcagctgcctccacacagaccatg 1741 Query: 548 cgtttatattcgtcatccccaaaatctgccattgccttagcttttttgtcccaggggttc 607 ||||||||||||||||||||||| |||| ||| |||||||| || |||||||| |||||| Sbjct: 1740 cgtttatattcgtcatccccaaagtctgacatagccttagccttcttgtcccaagggttc 1681 Query: 608 caaacaacagcat 620 ||||||||||||| Sbjct: 1680 caaacaacagcat 1668 Score = 93.7 bits (47), Expect = 7e-16 Identities = 82/91 (90%), Gaps = 2/91 (2%) Strand = Plus / Minus Query: 266 aaaacaacaaagatttgaatagaatggaagaaatgttttgacactcgtggctgcc-attt 324 ||||||||||||||||||||||||||||| ||| |||||||||||| | | |||| || | Sbjct: 3102 aaaacaacaaagatttgaatagaatggaataaacgttttgacactccttgttgccaatgt 3043 Query: 325 cccttgtgcatatgatattaatagtctacct 355 ||||| ||||||||||| ||||||||||||| Sbjct: 3042 cccttatgcatatgata-taatagtctacct 3013
>ref|XM_474188.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1035 Score = 272 bits (137), Expect = 1e-69 Identities = 218/245 (88%) Strand = Plus / Minus Query: 376 ctagctgacagaatcctccggaacaactgaatcctgaataacacgatctgggtccaattg 435 |||||||| || |||||||| ||| ||||||||||| ||||||||| || |||| || Sbjct: 1035 ctagctgattgagtcctccgggacacttgaatcctgaagaacacgatcaggatccagctg 976 Query: 436 accactgtaataactagacggaactgcagatagttccaattttccagtccactcctcgcc 495 |||||||||||| ||||| || || ||||| |||||||| ||||||||||||||||| || Sbjct: 975 accactgtaatagctagatgggacagcagacagttccaactttccagtccactcctcacc 916 Query: 496 aggcttcagagtaatcggcttttctatagcagctgcttccacacataccatgcgtttata 555 |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 915 aggcttcaaagtaatcggcttttctatagcagctgcctccacacagaccatgcgtttata 856 Query: 556 ttcgtcatccccaaaatctgccattgccttagcttttttgtcccaggggttccaaacaac 615 ||||||||||||||| |||| ||| |||||||| || |||||||| |||||||||||||| Sbjct: 855 ttcgtcatccccaaagtctgacatagccttagccttcttgtcccaagggttccaaacaac 796 Query: 616 agcat 620 ||||| Sbjct: 795 agcat 791
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 270 bits (136), Expect = 5e-69 Identities = 220/248 (88%) Strand = Plus / Minus Query: 368 actaagggctagctgacagaatcctccggaacaactgaatcctgaataacacgatctggg 427 ||||||| |||||||| || |||||||| ||| ||||||||||| ||||||||| || Sbjct: 27051 actaaggactagctgattgagtcctccgggacacttgaatcctgaagaacacgatcagga 26992 Query: 428 tccaattgaccactgtaataactagacggaactgcagatagttccaattttccagtccac 487 |||| |||||||||||||| ||||| || || ||||| |||||||| |||||||||||| Sbjct: 26991 tccagctgaccactgtaatagctagatgggacagcagacagttccaactttccagtccac 26932 Query: 488 tcctcgccaggcttcagagtaatcggcttttctatagcagctgcttccacacataccatg 547 ||||| |||||||||| ||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 26931 tcctcaccaggcttcaaagtaatcggcttttctatagcagctgcctccacacagaccatg 26872 Query: 548 cgtttatattcgtcatccccaaaatctgccattgccttagcttttttgtcccaggggttc 607 ||||||||||||||||||||||| |||| ||| |||||||| || |||||||| |||||| Sbjct: 26871 cgtttatattcgtcatccccaaagtctgacatagccttagccttcttgtcccaagggttc 26812 Query: 608 caaacaac 615 |||||||| Sbjct: 26811 caaacaac 26804 Score = 93.7 bits (47), Expect = 7e-16 Identities = 82/91 (90%), Gaps = 2/91 (2%) Strand = Plus / Minus Query: 266 aaaacaacaaagatttgaatagaatggaagaaatgttttgacactcgtggctgcc-attt 324 ||||||||||||||||||||||||||||| ||| |||||||||||| | | |||| || | Sbjct: 28233 aaaacaacaaagatttgaatagaatggaataaacgttttgacactccttgttgccaatgt 28174 Query: 325 cccttgtgcatatgatattaatagtctacct 355 ||||| ||||||||||| ||||||||||||| Sbjct: 28173 cccttatgcatatgata-taatagtctacct 28144
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 270 bits (136), Expect = 5e-69 Identities = 220/248 (88%) Strand = Plus / Minus Query: 368 actaagggctagctgacagaatcctccggaacaactgaatcctgaataacacgatctggg 427 ||||||| |||||||| || |||||||| ||| ||||||||||| ||||||||| || Sbjct: 27245 actaaggactagctgattgagtcctccgggacacttgaatcctgaagaacacgatcagga 27186 Query: 428 tccaattgaccactgtaataactagacggaactgcagatagttccaattttccagtccac 487 |||| |||||||||||||| ||||| || || ||||| |||||||| |||||||||||| Sbjct: 27185 tccagctgaccactgtaatagctagatgggacagcagacagttccaactttccagtccac 27126 Query: 488 tcctcgccaggcttcagagtaatcggcttttctatagcagctgcttccacacataccatg 547 ||||| |||||||||| ||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 27125 tcctcaccaggcttcaaagtaatcggcttttctatagcagctgcctccacacagaccatg 27066 Query: 548 cgtttatattcgtcatccccaaaatctgccattgccttagcttttttgtcccaggggttc 607 ||||||||||||||||||||||| |||| ||| |||||||| || |||||||| |||||| Sbjct: 27065 cgtttatattcgtcatccccaaagtctgacatagccttagccttcttgtcccaagggttc 27006 Query: 608 caaacaac 615 |||||||| Sbjct: 27005 caaacaac 26998 Score = 93.7 bits (47), Expect = 7e-16 Identities = 82/91 (90%), Gaps = 2/91 (2%) Strand = Plus / Minus Query: 266 aaaacaacaaagatttgaatagaatggaagaaatgttttgacactcgtggctgcc-attt 324 ||||||||||||||||||||||||||||| ||| |||||||||||| | | |||| || | Sbjct: 28427 aaaacaacaaagatttgaatagaatggaataaacgttttgacactccttgttgccaatgt 28368 Query: 325 cccttgtgcatatgatattaatagtctacct 355 ||||| ||||||||||| ||||||||||||| Sbjct: 28367 cccttatgcatatgata-taatagtctacct 28338
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 270 bits (136), Expect = 5e-69 Identities = 220/248 (88%) Strand = Plus / Minus Query: 368 actaagggctagctgacagaatcctccggaacaactgaatcctgaataacacgatctggg 427 ||||||| |||||||| || |||||||| ||| ||||||||||| ||||||||| || Sbjct: 33595991 actaaggactagctgattgagtcctccgggacacttgaatcctgaagaacacgatcagga 33595932 Query: 428 tccaattgaccactgtaataactagacggaactgcagatagttccaattttccagtccac 487 |||| |||||||||||||| ||||| || || ||||| |||||||| |||||||||||| Sbjct: 33595931 tccagctgaccactgtaatagctagatgggacagcagacagttccaactttccagtccac 33595872 Query: 488 tcctcgccaggcttcagagtaatcggcttttctatagcagctgcttccacacataccatg 547 ||||| |||||||||| ||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 33595871 tcctcaccaggcttcaaagtaatcggcttttctatagcagctgcctccacacagaccatg 33595812 Query: 548 cgtttatattcgtcatccccaaaatctgccattgccttagcttttttgtcccaggggttc 607 ||||||||||||||||||||||| |||| ||| |||||||| || |||||||| |||||| Sbjct: 33595811 cgtttatattcgtcatccccaaagtctgacatagccttagccttcttgtcccaagggttc 33595752 Query: 608 caaacaac 615 |||||||| Sbjct: 33595751 caaacaac 33595744 Score = 93.7 bits (47), Expect = 7e-16 Identities = 82/91 (90%), Gaps = 2/91 (2%) Strand = Plus / Minus Query: 266 aaaacaacaaagatttgaatagaatggaagaaatgttttgacactcgtggctgcc-attt 324 ||||||||||||||||||||||||||||| ||| |||||||||||| | | |||| || | Sbjct: 33597173 aaaacaacaaagatttgaatagaatggaataaacgttttgacactccttgttgccaatgt 33597114 Query: 325 cccttgtgcatatgatattaatagtctacct 355 ||||| ||||||||||| ||||||||||||| Sbjct: 33597113 cccttatgcatatgata-taatagtctacct 33597084 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 446 taactagacggaactgcagatagttccaattttccagtccactcctcgccaggcttcaga 505 ||||| || |||||||| || || |||| |||||| ||||||| ||||||||||||| Sbjct: 30471425 taactggaaggaactgcggagagatccatttttcctttccactcttcgccaggcttcaag 30471366 Query: 506 gtaatcggctt 516 ||||| ||||| Sbjct: 30471365 gtaatgggctt 30471355
>gb|BT016450.1| Zea mays clone Contig283 mRNA sequence Length = 1470 Score = 220 bits (111), Expect = 4e-54 Identities = 216/251 (86%) Strand = Plus / Minus Query: 370 taagggctagctgacagaatcctccggaacaactgaatcctgaataacacgatctgggtc 429 ||||| |||||||| || |||||||| ||| ||||||||||| ||||| || ||||| Sbjct: 1126 taaggactagctgatggagtcctccgggacagtggaatcctgaatcacacggtcagggtc 1067 Query: 430 caattgaccactgtaataactagacggaactgcagatagttccaattttccagtccactc 489 | |||||||||||||| ||||| || || ||||| |||||||| |||||||||||||| Sbjct: 1066 tagctgaccactgtaatagctagatggcacagcagaaagttccaactttccagtccactc 1007 Query: 490 ctcgccaggcttcagagtaatcggcttttctatagcagctgcttccacacataccatgcg 549 || |||||||||||||| | | |||||| |||||||| || ||||| |||||||| || Sbjct: 1006 ttcaccaggcttcagagtgacagtcttttcaatagcagccgcctccacgcataccattcg 947 Query: 550 tttatattcgtcatccccaaaatctgccattgccttagcttttttgtcccaggggttcca 609 ||||||||| |||||||||||||||| ||| ||||| ||||||||||||||||||||||| Sbjct: 946 tttatattcatcatccccaaaatctgacatagcctttgcttttttgtcccaggggttcca 887 Query: 610 aacaacagcat 620 ||||||||||| Sbjct: 886 aacaacagcat 876 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 266 aaaacaacaaagatttgaatagaatggaagaaa 298 |||||| | |||||||||| ||||||||||||| Sbjct: 1229 aaaacaccgaagatttgaacagaatggaagaaa 1197
>gb|AY104413.1| Zea mays PCO098503 mRNA sequence Length = 1571 Score = 212 bits (107), Expect = 1e-51 Identities = 215/251 (85%) Strand = Plus / Minus Query: 370 taagggctagctgacagaatcctccggaacaactgaatcctgaataacacgatctgggtc 429 ||||| |||||||| || |||||||| ||| ||||||||||| ||||| || ||||| Sbjct: 1274 taaggactagctgatggagtcctccgggacagtggaatcctgaatcacacggtcagggtc 1215 Query: 430 caattgaccactgtaataactagacggaactgcagatagttccaattttccagtccactc 489 | |||||||||||||| ||||| || || ||||| |||||||| |||||||||||||| Sbjct: 1214 tagctgaccactgtaatagctagatggcacagcagaaagttccaactttccagtccactc 1155 Query: 490 ctcgccaggcttcagagtaatcggcttttctatagcagctgcttccacacataccatgcg 549 || |||||||||||||| | | |||||| |||||||| || ||||| |||||||| || Sbjct: 1154 ttcaccaggcttcagagtgacagtcttttcaatagcagccgcctccacgcataccattcg 1095 Query: 550 tttatattcgtcatccccaaaatctgccattgccttagcttttttgtcccaggggttcca 609 ||||||||| |||||||||||||||| ||| ||||| |||||||| |||||||||||||| Sbjct: 1094 tttatattcatcatccccaaaatctgacatagcctttgcttttttatcccaggggttcca 1035 Query: 610 aacaacagcat 620 ||||||||||| Sbjct: 1034 aacaacagcat 1024 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 266 aaaacaacaaagatttgaatagaatggaagaaa 298 |||||| | |||||||||| ||||||||||||| Sbjct: 1377 aaaacaccgaagatttgaacagaatggaagaaa 1345
>ref|XM_480917.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1014 Score = 67.9 bits (34), Expect = 4e-08 Identities = 112/138 (81%) Strand = Plus / Minus Query: 483 tccactcctcgccaggcttcagagtaatcggcttttctatagcagctgcttccacacata 542 ||||||| || || |||||||||||||| ||||| || | ||| || | |||||||| | Sbjct: 934 tccactcttcacctggcttcagagtaataggcttctcaacagctgcaggctccacacaaa 875 Query: 543 ccatgcgtttatattcgtcatccccaaaatctgccattgccttagcttttttgtcccagg 602 |||| |||| ||||| |||| ||||||||| ||| || || || || |||||||| | Sbjct: 874 gcatgtgtttgtattctccatctccaaaatcttgcatagcttttgccttcttgtcccaag 815 Query: 603 ggttccaaacaacagcat 620 |||||||||||||||||| Sbjct: 814 ggttccaaacaacagcat 797
>gb|AY105198.1| Zea mays PCO070011 mRNA sequence Length = 1505 Score = 67.9 bits (34), Expect = 4e-08 Identities = 112/138 (81%) Strand = Plus / Minus Query: 483 tccactcctcgccaggcttcagagtaatcggcttttctatagcagctgcttccacacata 542 ||||||| || ||||| ||||||||||| ||| | || | ||| || | |||||||| | Sbjct: 1042 tccactcttccccaggtttcagagtaataggcctctcaacagctgcaggctccacacaca 983 Query: 543 ccatgcgtttatattcgtcatccccaaaatctgccattgccttagcttttttgtcccagg 602 ||||| || ||||| |||||||||||||| |||||| || || || |||||||| | Sbjct: 982 gcatgctcttgtattctgcatccccaaaatcttgcattgcttttgccttcttgtcccaag 923 Query: 603 ggttccaaacaacagcat 620 |||||||||||||||||| Sbjct: 922 ggttccaaacaacagcat 905
>dbj|D37938.1|PENPSBCA Pennisetum ciliare apomixis-associated mRNA, clone:psb C Length = 1398 Score = 67.9 bits (34), Expect = 4e-08 Identities = 112/138 (81%) Strand = Plus / Minus Query: 483 tccactcctcgccaggcttcagagtaatcggcttttctatagcagctgcttccacacata 542 ||||||| || ||||||||||||||||| ||||| || | ||| || | |||||||| | Sbjct: 1011 tccactcttcaccaggcttcagagtaataggcttctcaacagcggcaggctccacacaca 952 Query: 543 ccatgcgtttatattcgtcatccccaaaatctgccattgccttagcttttttgtcccagg 602 |||| || ||||| ||||||| |||||| ||| || ||||| || |||||||| | Sbjct: 951 gcatgttcttgtattctgcatccccgaaatcttgcatagctttagccttcttgtcccaag 892 Query: 603 ggttccaaacaacagcat 620 |||||||||||||||||| Sbjct: 891 ggttccaaacaacagcat 874
>gb|U13148.1|PCU13148 Pennisetum ciliare possible apospory-associated mRNA clone pSUB C, complete cds Length = 1398 Score = 67.9 bits (34), Expect = 4e-08 Identities = 112/138 (81%) Strand = Plus / Minus Query: 483 tccactcctcgccaggcttcagagtaatcggcttttctatagcagctgcttccacacata 542 ||||||| || ||||||||||||||||| ||||| || | ||| || | |||||||| | Sbjct: 1011 tccactcttcaccaggcttcagagtaataggcttctcaacagcggcaggctccacacaca 952 Query: 543 ccatgcgtttatattcgtcatccccaaaatctgccattgccttagcttttttgtcccagg 602 |||| || ||||| ||||||| |||||| ||| || ||||| || |||||||| | Sbjct: 951 gcatgttcttgtattctgcatccccgaaatcttgcatagctttagccttcttgtcccaag 892 Query: 603 ggttccaaacaacagcat 620 |||||||||||||||||| Sbjct: 891 ggttccaaacaacagcat 874
>emb|Z36544.1|PCAPOSPA1 P.ciliare (Higgins) apospory associated mRNA, 1398bp Length = 1398 Score = 67.9 bits (34), Expect = 4e-08 Identities = 112/138 (81%) Strand = Plus / Minus Query: 483 tccactcctcgccaggcttcagagtaatcggcttttctatagcagctgcttccacacata 542 ||||||| || ||||||||||||||||| ||||| || | ||| || | |||||||| | Sbjct: 1011 tccactcttcaccaggcttcagagtaataggcttctcaacagcggcaggctccacacaca 952 Query: 543 ccatgcgtttatattcgtcatccccaaaatctgccattgccttagcttttttgtcccagg 602 |||| || ||||| ||||||| |||||| ||| || ||||| || |||||||| | Sbjct: 951 gcatgttcttgtattctgcatccccgaaatcttgcatagctttagccttcttgtcccaag 892 Query: 603 ggttccaaacaacagcat 620 |||||||||||||||||| Sbjct: 891 ggttccaaacaacagcat 874
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 58.0 bits (29), Expect = 4e-05 Identities = 107/133 (80%) Strand = Plus / Plus Query: 483 tccactcctcgccaggcttcagagtaatcggcttttctatagcagctgcttccacacata 542 ||||||| || || |||||||||||||| ||||| || | ||| || | |||||||| | Sbjct: 8584425 tccactcttcacctggcttcagagtaataggcttctcaacagctgcaggctccacacaaa 8584484 Query: 543 ccatgcgtttatattcgtcatccccaaaatctgccattgccttagcttttttgtcccagg 602 |||| |||| ||||| |||| ||||||||| ||| || || || || |||||||| | Sbjct: 8584485 gcatgtgtttgtattctccatctccaaaatcttgcatagcttttgccttcttgtcccaag 8584544 Query: 603 ggttccaaacaac 615 ||||||||||||| Sbjct: 8584545 ggttccaaacaac 8584557
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0087F21 Length = 187401 Score = 58.0 bits (29), Expect = 4e-05 Identities = 107/133 (80%) Strand = Plus / Plus Query: 483 tccactcctcgccaggcttcagagtaatcggcttttctatagcagctgcttccacacata 542 ||||||| || || |||||||||||||| ||||| || | ||| || | |||||||| | Sbjct: 96336 tccactcttcacctggcttcagagtaataggcttctcaacagctgcaggctccacacaaa 96395 Query: 543 ccatgcgtttatattcgtcatccccaaaatctgccattgccttagcttttttgtcccagg 602 |||| |||| ||||| |||| ||||||||| ||| || || || || |||||||| | Sbjct: 96396 gcatgtgtttgtattctccatctccaaaatcttgcatagcttttgccttcttgtcccaag 96455 Query: 603 ggttccaaacaac 615 ||||||||||||| Sbjct: 96456 ggttccaaacaac 96468
>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0031C02 Length = 138843 Score = 58.0 bits (29), Expect = 4e-05 Identities = 107/133 (80%) Strand = Plus / Plus Query: 483 tccactcctcgccaggcttcagagtaatcggcttttctatagcagctgcttccacacata 542 ||||||| || || |||||||||||||| ||||| || | ||| || | |||||||| | Sbjct: 113968 tccactcttcacctggcttcagagtaataggcttctcaacagctgcaggctccacacaaa 114027 Query: 543 ccatgcgtttatattcgtcatccccaaaatctgccattgccttagcttttttgtcccagg 602 |||| |||| ||||| |||| ||||||||| ||| || || || || |||||||| | Sbjct: 114028 gcatgtgtttgtattctccatctccaaaatcttgcatagcttttgccttcttgtcccaag 114087 Query: 603 ggttccaaacaac 615 ||||||||||||| Sbjct: 114088 ggttccaaacaac 114100
>emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE Length = 136068 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Minus Query: 560 tcatccccaaaatctgccattgccttagcttttttgtcccaggggttccaaacaac 615 |||||||||||||| | |||| ||| | |||||| |||||||| ||||||||||| Sbjct: 53231 tcatccccaaaatccactattgactttgattttttctcccagggattccaaacaac 53176
>ref|NM_180162.1| Arabidopsis thaliana aldose 1-epimerase AT3G01590 transcript variant AT3G01590.2 mRNA, complete cds Length = 1557 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 tttttgtcccaggggttccaaacaacagcat 620 |||||||||||||||||||| ||||| |||| Sbjct: 1087 tttttgtcccaggggttccacacaactgcat 1057
>ref|NM_111025.2| Arabidopsis thaliana aldose 1-epimerase AT3G01590 transcript variant AT3G01590.1 mRNA, complete cds Length = 1487 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 tttttgtcccaggggttccaaacaacagcat 620 |||||||||||||||||||| ||||| |||| Sbjct: 1017 tttttgtcccaggggttccacacaactgcat 987
>ref|XM_473781.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 978 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 446 taactagacggaactgcagatagttccaattttccagtccactcctcgccaggcttcaga 505 ||||| || |||||||| || || |||| |||||| ||||||| ||||||||||||| Sbjct: 935 taactggaaggaactgcggagagatccatttttcctttccactcttcgccaggcttcaag 876 Query: 506 gtaatcggctt 516 ||||| ||||| Sbjct: 875 gtaatgggctt 865
>gb|AC122298.3| Mus musculus BAC clone RP23-269A11 from 12, complete sequence Length = 151332 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 85 gaataaaagaaagtgataaagaaaagaaaat 115 ||||||||||||| ||||||||| ||||||| Sbjct: 102939 gaataaaagaaagagataaagaagagaaaat 102969
>gb|BT000580.1| Arabidopsis thaliana unknown protein (At3g01590/F4P13_13) mRNA, complete cds Length = 921 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 tttttgtcccaggggttccaaacaacagcat 620 |||||||||||||||||||| ||||| |||| Sbjct: 728 tttttgtcccaggggttccacacaactgcat 698
>gb|AY091263.1| Arabidopsis thaliana unknown protein (At3g01590) mRNA, complete cds Length = 952 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 tttttgtcccaggggttccaaacaacagcat 620 |||||||||||||||||||| ||||| |||| Sbjct: 728 tttttgtcccaggggttccacacaactgcat 698
>gb|AY056177.1| Arabidopsis thaliana unknown protein (At3g01590) mRNA, complete cds Length = 1444 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 tttttgtcccaggggttccaaacaacagcat 620 |||||||||||||||||||| ||||| |||| Sbjct: 968 tttttgtcccaggggttccacacaactgcat 938
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 446 taactagacggaactgcagatagttccaattttccagtccactcctcgccaggcttcaga 505 ||||| || |||||||| || || |||| |||||| ||||||| ||||||||||||| Sbjct: 104802 taactggaaggaactgcggagagatccatttttcctttccactcttcgccaggcttcaag 104743 Query: 506 gtaatcggctt 516 ||||| ||||| Sbjct: 104742 gtaatgggctt 104732
>gb|AF439827.1|AF439827 Arabidopsis thaliana AT3g01590/F4P13_13 mRNA, complete cds Length = 1543 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 tttttgtcccaggggttccaaacaacagcat 620 |||||||||||||||||||| ||||| |||| Sbjct: 1087 tttttgtcccaggggttccacacaactgcat 1057
>emb|BX823033.1|CNS0A5YO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB82ZA12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1354 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 tttttgtcccaggggttccaaacaacagcat 620 |||||||||||||||||||| ||||| |||| Sbjct: 957 tttttgtcccaggggttccacacaactgcat 927
>emb|BX823295.1|CNS0A5BP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1377 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 tttttgtcccaggggttccaaacaacagcat 620 |||||||||||||||||||| ||||| |||| Sbjct: 949 tttttgtcccaggggttccacacaactgcat 919
>emb|BX823229.1|CNS0A5FU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS13ZF06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1412 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 tttttgtcccaggggttccaaacaacagcat 620 |||||||||||||||||||| ||||| |||| Sbjct: 957 tttttgtcccaggggttccacacaactgcat 927
>gb|AY088102.1| Arabidopsis thaliana clone 41354 mRNA, complete sequence Length = 1439 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 tttttgtcccaggggttccaaacaacagcat 620 |||||||||||||||||||| ||||| |||| Sbjct: 978 tttttgtcccaggggttccacacaactgcat 948
>dbj|AK070482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050C09, full insert sequence Length = 1518 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 446 taactagacggaactgcagatagttccaattttccagtccactcctcgccaggcttcaga 505 ||||| || |||||||| || || |||| |||||| ||||||| ||||||||||||| Sbjct: 1019 taactggaaggaactgcggagagatccatttttcctttccactcttcgccaggcttcaag 960 Query: 506 gtaatcggctt 516 ||||| ||||| Sbjct: 959 gtaatgggctt 949
>gb|AC129981.9| Mus musculus chromosome 5, clone RP23-114I13, complete sequence Length = 198469 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 102 aaagaaaagaaaatacagttataaat 127 ||||||||||||||||||||| |||| Sbjct: 6622 aaagaaaagaaaatacagttacaaat 6597
>gb|AF111103.1|MMHC322F16 Mouse major histocompatibility complex region containing the Q region of class I Length = 159179 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 76 agcatctgggaataaaagaaag 97 |||||||||||||||||||||| Sbjct: 135473 agcatctgggaataaaagaaag 135452
>gb|AC162896.3| Mus musculus chromosome 5, clone RP24-318J14, complete sequence Length = 180319 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 102 aaagaaaagaaaatacagttataaat 127 ||||||||||||||||||||| |||| Sbjct: 73556 aaagaaaagaaaatacagttacaaat 73531
>gb|AY663401.1| Pan troglodytes voucher Coriell Cell Repository DNA sample NS03646 MHC class II antigen (HLA-DQB1), MHC class II antigen (HLA-DQA1), and MHC class II antigen (HLA-DRB1) genes, complete cds Length = 111437 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Minus Query: 91 aagaaagtgataaagaaaagaaaatacagttata 124 |||||| | ||||||||||||||||||| ||||| Sbjct: 61949 aagaaaataataaagaaaagaaaatacatttata 61916
>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence, complete sequence Length = 105543 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 590 tttttgtcccaggggttccaaacaac 615 |||||||||||||||||||| ||||| Sbjct: 50144 tttttgtcccaggggttccacacaac 50119
>gb|AC003090.1| Homo sapiens BAC clone CTA-241I2 from 7, complete sequence Length = 94255 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 aaagaaaagaaaatacagttat 123 |||||||||||||||||||||| Sbjct: 18821 aaagaaaagaaaatacagttat 18800
>emb|AL592065.7| Mouse DNA sequence from clone RP23-50E4 on chromosome 11 Contains the 3' end of a novel gene, two novel genes, the 5' end of the Brip1 gene for BRCA1 interacting protein C-terminal helicase 1 and a mitochondrial F0 complex H+ transporting ATP synthase subunit g (Atp5l) pseudogene, complete sequence Length = 200624 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 aaagaaaagaaaatacagttat 123 |||||||||||||||||||||| Sbjct: 126356 aaagaaaagaaaatacagttat 126335
>gb|AC148663.1| Macaca mulatta Major Histocompatibility Complex BAC MMU012K22, complete sequence Length = 174897 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 89 aaaagaaagtgataaagaaaagaaaataca 118 |||||||| | ||||||||||||||||||| Sbjct: 166783 aaaagaaaataataaagaaaagaaaataca 166812
>gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex BAC MMU007H18, complete sequence Length = 215614 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 89 aaaagaaagtgataaagaaaagaaaataca 118 |||||||| | ||||||||||||||||||| Sbjct: 118131 aaaagaaaataataaagaaaagaaaataca 118160
>gb|AC087216.1|AC087216 Mus musculus strain 129svj chromosome 17 clone GS1-11M9, complete sequence Length = 226594 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 76 agcatctgggaataaaagaaag 97 |||||||||||||||||||||| Sbjct: 180730 agcatctgggaataaaagaaag 180709
>emb|CR974473.23| Mouse DNA sequence from clone RP23-38P5 on chromosome 17, complete sequence Length = 219471 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 76 agcatctgggaataaaagaaag 97 |||||||||||||||||||||| Sbjct: 134545 agcatctgggaataaaagaaag 134524
>gb|AC134572.4| Mus musculus BAC clone RP23-435M15 from chromosome 3, complete sequence Length = 202037 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 aaatacagttataaatttattttac 136 ||||||| ||||||||||||||||| Sbjct: 37442 aaatacacttataaatttattttac 37466
>gb|AC123923.2| Mus musculus BAC clone RP24-228I17 from chromosome 1, complete sequence Length = 163182 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 agtgataaagaaaagaaaata 116 ||||||||||||||||||||| Sbjct: 66425 agtgataaagaaaagaaaata 66445
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 90 aaagaaagtgataaagaaaagaaaa 114 ||||||| ||||||||||||||||| Sbjct: 875042 aaagaaaatgataaagaaaagaaaa 875066
>gb|AC022025.8| Homo sapiens chromosome 10 clone RP11-489D8, complete sequence Length = 189762 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 94 aaagtgataaagaaaagaaaatacagtta 122 ||||| ||||||||||||||||| ||||| Sbjct: 45344 aaagtcataaagaaaagaaaatatagtta 45372
>gb|AC027118.9| Homo sapiens chromosome 10 clone RP11-573I11, complete sequence Length = 170255 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 94 aaagtgataaagaaaagaaaatacagtta 122 ||||| ||||||||||||||||| ||||| Sbjct: 987 aaagtcataaagaaaagaaaatatagtta 959
>gb|AC009560.10| Homo sapiens chromosome 15, clone RP11-219B17, complete sequence Length = 177308 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 aaagaaaagaaaatacagtta 122 ||||||||||||||||||||| Sbjct: 73196 aaagaaaagaaaatacagtta 73176
>gb|AC105630.4| Rattus norvegicus X BAC CH230-131N20 (Children's Hospital Oakland Research Institute) complete sequence Length = 86901 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 agaaatcaatgttgagatttt 241 ||||||||||||||||||||| Sbjct: 54755 agaaatcaatgttgagatttt 54735
>gb|AC113761.6| Rattus norvegicus X BAC CH230-91H16 (Children's Hospital Oakland Research Institute) complete sequence Length = 232930 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 agaaatcaatgttgagatttt 241 ||||||||||||||||||||| Sbjct: 69324 agaaatcaatgttgagatttt 69344
>gb|AC108718.13| Homo sapiens 3 BAC RP11-246A10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 66513 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 atagaatggaagaaatgtttt 304 ||||||||||||||||||||| Sbjct: 56627 atagaatggaagaaatgtttt 56607
>gb|AC068535.7| Homo sapiens BAC clone RP11-120M14 from 2, complete sequence Length = 176703 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 105 gaaaagaaaatacagttataaattt 129 |||||||||||||| |||||||||| Sbjct: 148153 gaaaagaaaatacacttataaattt 148129
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 aagaaagtgataaagaaaagaaaat 115 |||||||| |||||||||||||||| Sbjct: 2719183 aagaaagttataaagaaaagaaaat 2719159
>gb|AC102383.7| Mus musculus chromosome 1, clone RP24-312K8, complete sequence Length = 142805 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 aagtgataaagaaaagaaaat 115 ||||||||||||||||||||| Sbjct: 114654 aagtgataaagaaaagaaaat 114634
>gb|AY107483.1| Zea mays PCO113991 mRNA sequence Length = 804 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 aaagaaagtgataaagaaaagaaaa 114 |||||||| |||||||||||||||| Sbjct: 633 aaagaaagagataaagaaaagaaaa 609
>gb|AC102370.13| Mus musculus chromosome 3, clone RP23-256D7, complete sequence Length = 191171 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 aaatacagttataaatttattttac 136 ||||||| ||||||||||||||||| Sbjct: 170075 aaatacacttataaatttattttac 170099
>emb|AL627446.12| Mouse DNA sequence from clone RP23-211F22 on chromosome 4, complete sequence Length = 103091 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 tgataaagaaaagaaaataca 118 ||||||||||||||||||||| Sbjct: 74732 tgataaagaaaagaaaataca 74712
>ref|NM_128631.2| Arabidopsis thaliana unknown protein AT2G30780 mRNA, complete cds Length = 1432 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 atttgaatagaatggaagaaatgt 301 |||||||||| ||||||||||||| Sbjct: 849 atttgaataggatggaagaaatgt 872
>gb|BC074628.1| Xenopus tropicalis keratin, mRNA (cDNA clone MGC:69554 IMAGE:5378980), complete cds Length = 1583 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 tgttgagattttcgctctgt 249 |||||||||||||||||||| Sbjct: 821 tgttgagattttcgctctgt 802
>gb|AC121821.3| Mus musculus chromosome 18 clone RP23-461O23, complete sequence Length = 175131 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 88 taaaagaaagtgataaagaaaagaaaat 115 |||||||||||||| | ||||||||||| Sbjct: 64692 taaaagaaagtgattatgaaaagaaaat 64665
>gb|AC166488.5| Mus musculus chromosome 1, clone RP23-245C4, complete sequence Length = 194413 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aaagaaaagaaaatacagtt 121 |||||||||||||||||||| Sbjct: 102525 aaagaaaagaaaatacagtt 102506
>gb|AY333900.1| Cotesia bignellii from France NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial Length = 655 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 aaagatttgaatagaatgga 293 |||||||||||||||||||| Sbjct: 131 aaagatttgaatagaatgga 112
>gb|AY333898.1| Cotesia acuminata from China NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial Length = 640 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 aaagatttgaatagaatgga 293 |||||||||||||||||||| Sbjct: 122 aaagatttgaatagaatgga 103
>gb|AC146106.3| Pan troglodytes BAC clone RP43-5I17 from 7, complete sequence Length = 221821 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aaagaaaagaaaatacagtt 121 |||||||||||||||||||| Sbjct: 49778 aaagaaaagaaaatacagtt 49759
>gb|AC132140.3| Mus musculus BAC clone RP23-82C19 from chromosome 19, complete sequence Length = 278583 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tgacatcatcttcgcctttt 57 |||||||||||||||||||| Sbjct: 12722 tgacatcatcttcgcctttt 12741
>gb|BC096005.1| Xenopus tropicalis hypothetical protein LOC613046, mRNA (cDNA clone IMAGE:7003650), partial cds Length = 2505 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ataaagaaaagaaaatacag 119 |||||||||||||||||||| Sbjct: 1952 ataaagaaaagaaaatacag 1971
>gb|AY663414.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA03715 MHC class II antigen (HLA-DQB1) gene and MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0103 allele, complete cds; and MHC class II antigen (HLA-DRB1) gene, partial cds Length = 118048 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 aagaaagtgataaagaaaagaaaataca 118 |||||| | ||||||||||||||||||| Sbjct: 86268 aagaaaataataaagaaaagaaaataca 86241
>gb|AY663411.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14663 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*0602 allele, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010201 allele, and MHC class II antigen (HLA-DRB1) gene, complete cds Length = 99966 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 aagaaagtgataaagaaaagaaaataca 118 |||||| | ||||||||||||||||||| Sbjct: 57230 aagaaaataataaagaaaagaaaataca 57203
>gb|AY663409.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA04535 MHC class II antigen (HLA-DQB1) gene and MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0505 allele, complete cds; and MHC class II antigen (HLA-DRB1) gene, partial cds Length = 77506 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 aagaaagtgataaagaaaagaaaataca 118 |||||| | ||||||||||||||||||| Sbjct: 51279 aagaaaataataaagaaaagaaaataca 51252
>gb|AY663406.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA10923 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*0602 allele, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010201 allele, and MHC class II antigen (HLA-DRB1) gene, HLA-DRB1-DRB1*150101 allele, complete cds Length = 103395 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 aagaaagtgataaagaaaagaaaataca 118 |||||| | ||||||||||||||||||| Sbjct: 68205 aagaaaataataaagaaaagaaaataca 68178
>gb|AY663400.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA01018 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*050101 allele, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010102 allele, and MHC class II antigen (HLA-DRB1) gene, complete cds Length = 143390 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 aagaaagtgataaagaaaagaaaataca 118 |||||| | ||||||||||||||||||| Sbjct: 88196 aagaaaataataaagaaaagaaaataca 88169
>gb|AY663395.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14660 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*0602 allele, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010201 allele, and MHC class II antigen (HLA-DRB1) gene, complete cds Length = 104996 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 aagaaagtgataaagaaaagaaaataca 118 |||||| | ||||||||||||||||||| Sbjct: 57089 aagaaaataataaagaaaagaaaataca 57062
>gb|AY558503.1| Saccharomyces cerevisiae clone FLH002826.01X YGL153W gene, complete cds Length = 1026 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 aagaaagtgataaagaaaag 110 |||||||||||||||||||| Sbjct: 833 aagaaagtgataaagaaaag 852
>gb|AC073273.9| Homo sapiens BAC clone RP11-643A21 from 7, complete sequence Length = 152884 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aaagaaaagaaaatacagtt 121 |||||||||||||||||||| Sbjct: 130607 aaagaaaagaaaatacagtt 130588
>gb|AC006006.2| Homo sapiens PAC clone RP4-813F11 from 7, complete sequence Length = 136385 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 aacaactgaatcctgaataa 416 |||||||||||||||||||| Sbjct: 49822 aacaactgaatcctgaataa 49841
>gb|AC107454.12| Mus musculus chromosome 3, clone RP23-339P23, complete sequence Length = 199324 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aaagaaaagaaaatacagtt 121 |||||||||||||||||||| Sbjct: 11646 aaagaaaagaaaatacagtt 11627
>gb|AC122251.4| Mus musculus BAC clone RP23-167J15 from chromosome 14, complete sequence Length = 204588 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 87 ataaaagaaagtgataaagaaaagaaaa 114 ||||||||||| || ||||||||||||| Sbjct: 173802 ataaaagaaagagaaaaagaaaagaaaa 173829
>gb|AC117234.4| Mus musculus BAC clone RP23-410J2 from chromosome 6, complete sequence Length = 193027 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 aataaaagaaagtgataaagaaaa 109 ||||||||||||||| |||||||| Sbjct: 155762 aataaaagaaagtgaaaaagaaaa 155785
>emb|Z75540.1|CEF37D6 Caenorhabditis elegans Cosmid F37D6, complete sequence Length = 29363 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 tgaatagaatggaagaaatg 300 |||||||||||||||||||| Sbjct: 12937 tgaatagaatggaagaaatg 12918
>gb|AC124540.4| Mus musculus BAC clone RP23-361G19 from chromosome 19, complete sequence Length = 199168 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tgacatcatcttcgcctttt 57 |||||||||||||||||||| Sbjct: 38434 tgacatcatcttcgcctttt 38415
>ref|XM_645490.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (210.t00011) partial mRNA Length = 3432 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 aaagaaagtgataaagaaaagaaa 113 |||||| ||||||||||||||||| Sbjct: 3304 aaagaaggtgataaagaaaagaaa 3327
>ref|XM_652038.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (4.t00085) partial mRNA Length = 2685 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 aataaaagaaagtgataaagaaaa 109 ||||||||||| |||||||||||| Sbjct: 1995 aataaaagaaactgataaagaaaa 2018
>ref|XM_738825.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000214.04.0) partial mRNA Length = 1137 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ttataaatttattttacaac 139 |||||||||||||||||||| Sbjct: 240 ttataaatttattttacaac 259
>gb|AY308029.1| Polaribacter filamentus N-formylkynurenine (aryl-) formamidase gene, complete cds Length = 750 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 cacataccatgcgtttatat 556 |||||||||||||||||||| Sbjct: 114 cacataccatgcgtttatat 95
>ref|XM_673075.1| Plasmodium berghei strain ANKA hypothetical protein (PB001518.02.0) partial mRNA Length = 3375 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ttataaatttattttacaac 139 |||||||||||||||||||| Sbjct: 174 ttataaatttattttacaac 193
>gb|AC164642.3| Mus musculus BAC clone RP23-248L4 from chromosome 6, complete sequence Length = 212166 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 aaagaaaatacagttataaa 126 |||||||||||||||||||| Sbjct: 160422 aaagaaaatacagttataaa 160403
>gb|AC093562.3| Homo sapiens chromosome 1 clone RP11-553F10, complete sequence Length = 205171 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 taaatttattttacaaccca 142 |||||||||||||||||||| Sbjct: 76380 taaatttattttacaaccca 76361
>gb|AC144799.3| Mus musculus chromosome 18 clone RP24-299J7, complete sequence Length = 192272 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 taaaagaaagtgataaagaaaagaaaat 115 |||||||||||||| | ||||||||||| Sbjct: 34887 taaaagaaagtgattatgaaaagaaaat 34914
>emb|AL662789.11| Human DNA sequence from clone XXbac-254F23 on chromosome 6 contains the 5' end of the HLA-DRB1 gene for major histocompatibility complex, class II, DR beta 1, the HLA-DQA1 gene for major histocompatibility complex, class II, DQ alpha 1, the HLA-DQB1 gene for major histocompatibility complex, class II, DQ beta 1, a cytochrome C oxidase polypeptide III pseudogene, a major histocompatibility complex, class II, beta polypeptide pseudogene and two CpG islands, complete sequence Length = 147557 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 91 aagaaagtgataaagaaaagaaaataca 118 |||||| | ||||||||||||||||||| Sbjct: 24332 aagaaaataataaagaaaagaaaataca 24359
>emb|AL607150.10| Human DNA sequence from clone RP11-531F24 on chromosome 10 Contains a novel gene (FLJ39352), complete sequence Length = 96268 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aaagaaaagaaaatacagtt 121 |||||||||||||||||||| Sbjct: 85352 aaagaaaagaaaatacagtt 85333
>emb|AL592287.4| Human DNA sequence from clone RP11-107P1 on chromosome 1, complete sequence Length = 189385 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 aaacagaaatcaatgttgagattt 240 |||||||||||||| ||||||||| Sbjct: 41642 aaacagaaatcaatattgagattt 41665
>emb|AL359197.20| Human DNA sequence from clone RP11-498I18 on chromosome 1, complete sequence Length = 191686 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 aaaatacagttataaatttatttt 134 |||||||| ||||||||||||||| Sbjct: 75527 aaaatacatttataaatttatttt 75550
>emb|AL354919.16| Human DNA sequence from clone RP11-84A19 on chromosome 1 Contains the 5' end of the BAI2 gene for brain-specific angiogenesis inhibitor 2, the gene for a novel protein (FLJ33697, FLJ25348, FLJ39908, FLJ25348, FLJ38510, FLJ38873), a novel gene (FLJ46627) and three CpG islands, complete sequence Length = 124413 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 aaagaaaatacagttataaa 126 |||||||||||||||||||| Sbjct: 58270 aaagaaaatacagttataaa 58289
>gb|AC087442.13| Homo sapiens chromosome 11, clone RP11-495O11, complete sequence Length = 200269 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 572 tctgccattgccttagcttttttg 595 |||||||||||||| ||||||||| Sbjct: 108054 tctgccattgcctttgcttttttg 108031
>emb|AL133476.17| Human DNA sequence from clone RP11-156G14 on chromosome 9p13.1-13.3 Contains the 3' end of a novel gene, a protein associated with PRK1 (AWP1) pseudogene, a novel gene (KIAA0375), a ribosomal protein L36a (L44L, RPL44) (RPL36A) pseudogene, a novel gene, a ribosomal protein S29 (RPS29) pseudogene and a CpG island, complete sequence Length = 153826 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 ataaagaaaagaaaatacagttat 123 ||||||||||||||||| |||||| Sbjct: 38623 ataaagaaaagaaaatagagttat 38646
>gb|AC164636.4| Mus musculus BAC clone RP23-70P16 from chromosome 6, complete sequence Length = 212096 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 aaagaaaatacagttataaa 126 |||||||||||||||||||| Sbjct: 202232 aaagaaaatacagttataaa 202251
>emb|AL035658.7|HS85F18 Human DNA sequence from clone RP1-85F18 on chromosome 22q13.31-13.33, complete sequence Length = 41917 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 aaaagaaaatacagttataaattt 129 ||||||||||| |||||||||||| Sbjct: 21585 aaaagaaaatatagttataaattt 21608
>emb|Z48618.1|SCCHVII35 S.cerevisiae genes for RAD54, ACE1(CUP2), PMR1, RCK1, AMS1, DNA helicase and tRNA-Leu Length = 35364 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 aagaaagtgataaagaaaag 110 |||||||||||||||||||| Sbjct: 26415 aagaaagtgataaagaaaag 26434
>ref|NM_001006686.1| Xenopus tropicalis keratin (krt), mRNA Length = 1583 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 tgttgagattttcgctctgt 249 |||||||||||||||||||| Sbjct: 821 tgttgagattttcgctctgt 802
>emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in linkage group 9, complete sequence Length = 219065 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 aagtgataaagaaaagaaaa 114 |||||||||||||||||||| Sbjct: 163675 aagtgataaagaaaagaaaa 163656
>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox cluster, cholinesterase, and COLP5alpha genes, complete sequence Length = 796348 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 gaaacagaaatcaatgttgagatt 239 ||||||||||| |||||||||||| Sbjct: 13979 gaaacagaaattaatgttgagatt 14002
>gb|AC099677.2| Homo sapiens chromosome 1 clone RP4-631H13, complete sequence Length = 116236 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aaagaaagtgataaagaaaa 109 |||||||||||||||||||| Sbjct: 24253 aaagaaagtgataaagaaaa 24234
>gb|AC027309.3| Homo sapiens chromosome 5 clone CTB-79E8, complete sequence Length = 189479 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 91 aagaaagtgataaagaaaagaaaatacagtta 122 |||||| | |||||||| |||||||||||||| Sbjct: 176518 aagaaaatcataaagaagagaaaatacagtta 176487
>gb|AC095033.2| Homo sapiens chromosome 1 clone RP11-313A24, complete sequence Length = 157332 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 89 aaaagaaagtgataaagaaaagaaaata 116 |||||||| | ||||||||||||||||| Sbjct: 145039 aaaagaaaatcataaagaaaagaaaata 145012
>gb|AC130805.15| Medicago truncatula clone mth2-9n1, complete sequence Length = 139054 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 gaaatcaatgttgagatttt 241 |||||||||||||||||||| Sbjct: 74803 gaaatcaatgttgagatttt 74784
>gb|AC012469.10| Homo sapiens chromosome 10 clone RP11-216P13, complete sequence Length = 170367 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 agaaaagaaaatacagttat 123 |||||||||||||||||||| Sbjct: 75682 agaaaagaaaatacagttat 75701
>gb|AC002340.3| Arabidopsis thaliana chromosome 2 BAC T11J7 genomic sequence, complete sequence Length = 79574 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 atttgaatagaatggaagaaatgt 301 |||||||||| ||||||||||||| Sbjct: 71358 atttgaataggatggaagaaatgt 71381
>gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, complete sequence Length = 184520 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 agtgataaagaaaagaaaat 115 |||||||||||||||||||| Sbjct: 91288 agtgataaagaaaagaaaat 91307
>gb|AC015804.14| Homo sapiens chromosome 17, clone RP11-637C24, complete sequence Length = 200452 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ttataaatttattttacaac 139 |||||||||||||||||||| Sbjct: 183531 ttataaatttattttacaac 183550
>gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, complete sequence Length = 214702 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aaagaaaagaaaatacagtt 121 |||||||||||||||||||| Sbjct: 78210 aaagaaaagaaaatacagtt 78191
>gb|AC092802.2| Homo sapiens chromosome 1 clone RP11-57H12, complete sequence Length = 163331 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 89 aaaagaaagtgataaagaaaagaaaata 116 |||||||| | ||||||||||||||||| Sbjct: 60610 aaaagaaaatcataaagaaaagaaaata 60583
>gb|AC008654.5|AC008654 Homo sapiens chromosome 5 clone CTB-191B18, complete sequence Length = 63760 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 91 aagaaagtgataaagaaaagaaaatacagtta 122 |||||| | |||||||| |||||||||||||| Sbjct: 6119 aagaaaatcataaagaagagaaaatacagtta 6088
>gb|AC022217.5|AC022217 Homo sapiens BAC clone RP11-779O18 from 5, complete sequence Length = 193960 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 91 aagaaagtgataaagaaaagaaaatacagtta 122 |||||| | |||||||| |||||||||||||| Sbjct: 50930 aagaaaatcataaagaagagaaaatacagtta 50899
>gb|AC156550.5| Mus musculus chromosome 15, clone RP23-353K7, complete sequence Length = 205302 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 aaatttattttacaacccatctaa 147 ||||||||||||||| |||||||| Sbjct: 123473 aaatttattttacaatccatctaa 123496
>dbj|AB199027.1| Lemur catta Leca-T2R4 gene for bitter taste receptor T2R4, partial cds Length = 875 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 431 aattgaccactgtaataactagac 454 |||||||||||||||||| ||||| Sbjct: 92 aattgaccactgtaataaatagac 69
>gb|AC093767.2| Homo sapiens BAC clone RP11-107E21 from 4, complete sequence Length = 149505 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 aaagaaaagaaaatacagtt 121 |||||||||||||||||||| Sbjct: 120098 aaagaaaagaaaatacagtt 120117
>gb|AC147317.3| Pan troglodytes BAC clone RP43-49P4 from chromosome 7, complete sequence Length = 196949 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 gaaaagaaaatacagttataaatt 128 |||||||||||| ||||||||||| Sbjct: 88486 gaaaagaaaataaagttataaatt 88463
>gb|AC152506.2| Pan troglodytes BAC clone RP43-4B9 from chromosome 7, complete sequence Length = 181146 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aaagaaaagaaaatacagtt 121 |||||||||||||||||||| Sbjct: 12782 aaagaaaagaaaatacagtt 12763
>gb|AC015979.4|AC015979 Homo sapiens BAC clone RP11-538M13 from Y, complete sequence Length = 22212 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aaagaaaagaaaatacagtt 121 |||||||||||||||||||| Sbjct: 21295 aaagaaaagaaaatacagtt 21276
>gb|AC116910.11| Homo sapiens chromosome 17, clone CTD-2573C9, complete sequence Length = 149156 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 86 aataaaagaaagtgataaagaaaagaaaatac 117 ||||||||||| || |||||||||||||||| Sbjct: 8863 aataaaagaaacagaaaaagaaaagaaaatac 8894
>gb|AC084211.19| Homo sapiens 3 BAC RP11-338L18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154026 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 aaagtgataaagaaaagaaa 113 |||||||||||||||||||| Sbjct: 113256 aaagtgataaagaaaagaaa 113275
>gb|AC177793.1| Pan troglodytes chromosome X clone CH251-542N20 map human ortholog p11.4, complete sequence Length = 167413 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 agaatggaagaaatgttttg 305 |||||||||||||||||||| Sbjct: 67649 agaatggaagaaatgttttg 67668
>gb|AC009511.16|AC009511 Homo sapiens 12 BAC RP11-860B13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 60385 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 tgaatagaatggaagaaatg 300 |||||||||||||||||||| Sbjct: 17262 tgaatagaatggaagaaatg 17243
>gb|AC111173.10| Homo sapiens chromosome 17, clone RP11-148L19, complete sequence Length = 27994 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 86 aataaaagaaagtgataaagaaaagaaaatac 117 ||||||||||| || |||||||||||||||| Sbjct: 16300 aataaaagaaacagaaaaagaaaagaaaatac 16269
>emb|BX322656.11| Mouse DNA sequence from clone RP23-146D13 on chromosome X, complete sequence Length = 199567 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 aaagaaagtgataaagaaaagaaa 113 |||||||| ||||||||||||||| Sbjct: 100712 aaagaaagagataaagaaaagaaa 100689
>gb|AY530952.1| Zea mays unknown (Z576C20.2), putative heme oxygenase 1 (Z576C20.3), anthocyanin biosynthesis regulatory protein Pl1_B73 (Z576C20.4), putative growth-regulating factor 1 (Z576C20.6), and putative aminoalcoholphosphotransferase (Z576C20.14) genes, complete cds; and putative receptor protein kinase (Z576C20.21) gene, partial cds Length = 155173 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 tgtggatcccgaaacagaaatcaa 229 |||||||| ||||||||||||||| Sbjct: 108838 tgtggatctcgaaacagaaatcaa 108861
>emb|Z72675.1|SCYGL153W S.cerevisiae chromosome VII reading frame ORF YGL153w Length = 1427 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 aagaaagtgataaagaaaag 110 |||||||||||||||||||| Sbjct: 1009 aagaaagtgataaagaaaag 1028
>emb|CR760223.2| Xenopus tropicalis finished cDNA, clone TNeu065l03 Length = 1562 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 tgttgagattttcgctctgt 249 |||||||||||||||||||| Sbjct: 808 tgttgagattttcgctctgt 789
>dbj|AK112954.1| Ciona intestinalis cDNA, clone:cicl007o01, full insert sequence Length = 1130 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 aacaaagatttgaatagaat 290 |||||||||||||||||||| Sbjct: 811 aacaaagatttgaatagaat 830
>emb|AL672162.6| Mouse DNA sequence from clone RP23-100C4 on chromosome 2, complete sequence Length = 136483 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 atacagttataaatttattt 133 |||||||||||||||||||| Sbjct: 103119 atacagttataaatttattt 103100
>gb|AC134614.4| Mus musculus BAC clone RP23-148D12 from 14, complete sequence Length = 209278 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 87 ataaaagaaagtgataaagaaaagaaaa 114 ||||||||||| || ||||||||||||| Sbjct: 21397 ataaaagaaagagaaaaagaaaagaaaa 21424
>emb|CT485755.1| Xenopus tropicalis finished cDNA, clone TNeu112g02 Length = 1563 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 tgttgagattttcgctctgt 249 |||||||||||||||||||| Sbjct: 811 tgttgagattttcgctctgt 792 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,606,071 Number of Sequences: 3902068 Number of extensions: 7606071 Number of successful extensions: 175536 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 174962 Number of HSP's gapped (non-prelim): 562 length of query: 620 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 597 effective length of database: 17,143,297,704 effective search space: 10234548729288 effective search space used: 10234548729288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
