| Clone Name | rbags7d09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | OMT1_ORYSA (Q6ZD89) Quercetin 3-O-methyltransferase 1 (EC 2.1.1.... | 36 | 0.024 | 2 | COMT1_MAIZE (Q06509) Caffeic acid 3-O-methyltransferase (EC 2.1.... | 33 | 0.16 | 3 | COMT1_SACOF (O82054) Caffeic acid 3-O-methyltransferase (EC 2.1.... | 32 | 0.35 | 4 | RMUC_NEIMB (Q9JXH2) DNA recombination protein rmuC homolog | 28 | 6.6 | 5 | RMUC_NEIMA (Q9JWG3) DNA recombination protein rmuC homolog | 28 | 6.6 |
|---|
>OMT1_ORYSA (Q6ZD89) Quercetin 3-O-methyltransferase 1 (EC 2.1.1.76) (Flavonol| 3-O-methyltransferase 1) Length = 368 Score = 36.2 bits (82), Expect = 0.024 Identities = 17/31 (54%), Positives = 22/31 (70%) Frame = -2 Query: 196 KEFARLAKQAGXTGGIKKTYIFXNXYALEFT 104 +EF LA+ AG TG K TYI+ N +A+EFT Sbjct: 338 REFRELARAAGFTG-FKATYIYANAWAIEFT 367
>COMT1_MAIZE (Q06509) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 364 Score = 33.5 bits (75), Expect = 0.16 Identities = 16/30 (53%), Positives = 21/30 (70%) Frame = -2 Query: 196 KEFARLAKQAGXTGGIKKTYIFXNXYALEF 107 +EF LAK AG +G K TYI+ N +A+EF Sbjct: 334 REFRELAKGAGFSG-FKATYIYANAWAIEF 362
>COMT1_SACOF (O82054) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 362 Score = 32.3 bits (72), Expect = 0.35 Identities = 16/30 (53%), Positives = 21/30 (70%) Frame = -2 Query: 196 KEFARLAKQAGXTGGIKKTYIFXNXYALEF 107 +EF LAK AG +G K TYI+ N +A+EF Sbjct: 332 REFHDLAKGAGFSG-FKATYIYANAWAIEF 360
>RMUC_NEIMB (Q9JXH2) DNA recombination protein rmuC homolog| Length = 594 Score = 28.1 bits (61), Expect = 6.6 Identities = 21/61 (34%), Positives = 28/61 (45%) Frame = +3 Query: 9 ARELAALIRDIXXKXRSAPXRDYTXLVRGCYXVNSRAXKLXNM*VFLMPPVNPACLASLA 188 ARELAA + I + +DYT L G ++ VF+ PV PA L +L Sbjct: 409 ARELAAHVASIRAHMKGLSLKDYTDL-EGVNTLDF---------VFMFIPVEPAYLLALQ 458 Query: 189 N 191 N Sbjct: 459 N 459
>RMUC_NEIMA (Q9JWG3) DNA recombination protein rmuC homolog| Length = 594 Score = 28.1 bits (61), Expect = 6.6 Identities = 21/61 (34%), Positives = 28/61 (45%) Frame = +3 Query: 9 ARELAALIRDIXXKXRSAPXRDYTXLVRGCYXVNSRAXKLXNM*VFLMPPVNPACLASLA 188 ARELAA + I + +DYT L G ++ VF+ PV PA L +L Sbjct: 409 ARELAAHVASIRAHMKGLSLKDYTDL-EGVNTLDF---------VFMFIPVEPAYLLALQ 458 Query: 189 N 191 N Sbjct: 459 N 459 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,789,338 Number of Sequences: 219361 Number of extensions: 179370 Number of successful extensions: 218 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 218 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 218 length of database: 80,573,946 effective HSP length: 41 effective length of database: 71,580,145 effective search space used: 1717923480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)