>2NPD_NEUCR (Q01284) 2-nitropropane dioxygenase precursor (EC 1.13.11.32)|
           (Nitroalkane oxidase) (2-NPD)
          Length = 378

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 6/155 (3%)
 Frame = -3

Query: 655 ALALGAHGVCLGTRFVATEESFAHPLYKKKLIEMNCTDYTNVFGRARWPGAPQRVLKTPF 476
           AL LGA GV LGTRF    E+      +K ++E N      V              K+ F
Sbjct: 241 ALGLGAEGVVLGTRFTVAVEASTPEFRRKVILETNDGGLNTV--------------KSHF 286

Query: 475 YVE------WKNLPDHETEENQPIIGHSIIHGVHKDIRRFAGTVPNATTTGDIHSMAMYA 314
           + +      W N+ D     N     H+      ++ ++F      A ++GD      ++
Sbjct: 287 HDQINCNTIWHNVYDGRAVRNASYDDHAAGVPFEENHKKF----KEAASSGDNSRAVTWS 342

Query: 313 GQGVGLITEIVPAREVVERLVTQAQYVIGEKLSGF 209
           G  VGLI +  PA ++V  L  +A+  I +K+  F
Sbjct: 343 GTAVGLIKDQRPAGDIVRELREEAKERI-KKIQAF 376

>SF3B1_SCHPO (Q10178) U2 snRNP component prp10|
          Length = 1188

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
 Frame = -3

Query: 610 VATEESFAHPLYKKKLIEMNCTDYTNVFGRARWPGAPQRVLK---TPFYVEWKNLPDHET 440
           V  EES +    KK+ +E+N T+ +    R+RW  AP  V +   T     W   P    
Sbjct: 190 VEEEESISD---KKRELELNNTEISQKPKRSRWDQAPPSVTQVSTTKRRSRWDKAP---- 242

Query: 439 EENQPIIGHSIIHGVHKDI 383
            EN  I  H I +G+ +D+
Sbjct: 243 -ENFTISEHVIENGISEDL 260

>AMYG_ASPKA (P23176) Glucoamylase I precursor (EC 3.2.1.3) (Glucan|
           1,4-alpha-glucosidase) (1,4-alpha-D-glucan
           glucohydrolase)
          Length = 639

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 213 PESFSPMTYCAWVTSLSTTSLAGTISVISPTPWPAYIA 326
           P S+   +  +W  + + TS +GT S ++ T WP+ +A
Sbjct: 457 PPSWGETSASSWPGTCAATSASGTYSSVTVTSWPSIVA 494

>POLG_PVMA (Q85197) Genome polyprotein [Contains: P1 proteinase (N-terminal|
            protein); Helper component proteinase (EC 3.4.22.45)
            (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
            inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
            (6K2); Viral gen
          Length = 3059

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = -3

Query: 442  TEENQPIIGHSIIHGVHKDIRRFAGTVPNATTTGDIHSMAMYAGQGVGLITEIVPAREVV 263
            T  N P I H I H +H DI    G V +  +TG  + ++    +G  L+ E  P R + 
Sbjct: 1216 TRANAPTIAHQIAHDLHTDI-MLRGAVGSGKSTGLPYHLSK---KGTVLLLE--PTRPLA 1269

Query: 262  ERLVTQ 245
            E +  Q
Sbjct: 1270 ENVTKQ 1275

>CUZD1_HUMAN (Q86UP6) CUB and zona pellucida-like domain-containing protein 1|
           precursor (Transmembrane protein UO-44)
          Length = 607

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +3

Query: 6   IERFIFTVTEYTYKQHIQVQNCGPKRDTLENSFILIGY 119
           I+R +F V  Y +  +I + NCG   DTLE SF    Y
Sbjct: 134 IQRTVF-VFYYFFSPNISIPNCGGYLDTLEGSFTSPNY 170

>CAD23_MOUSE (Q99PF4) Cadherin-23 precursor (Otocadherin)|
          Length = 3354

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 26/95 (27%), Positives = 41/95 (43%)
 Frame = -3

Query: 613  FVATEESFAHPLYKKKLIEMNCTDYTNVFGRARWPGAPQRVLKTPFYVEWKNLPDHETEE 434
            +V  E+S A  +   + ++     + N   RA   G+P R  + P Y+E  ++ D+    
Sbjct: 2343 YVQLEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIF 2402

Query: 433  NQPIIGHSIIHGVHKDIRRFAGTVPNATTTGDIHS 329
            +QP    S    V +DI    GTV    T  D  S
Sbjct: 2403 DQP----SYQEAVFEDIA--VGTVILRVTATDADS 2431

>WZYE_PHOLL (Q7MYM5) Putative ECA polymerase|
          Length = 459

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -3

Query: 514 WPGAPQRVLKTPFYVEWKNLPDHETEENQP-IIGHSIIHG 398
           WPG P  VL +  Y  W+ L +H      P +IG  ++ G
Sbjct: 305 WPGRPDAVLNSANYFTWEVLDNHSGLAISPTLIGSLVVMG 344


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,006,716
Number of Sequences: 219361
Number of extensions: 2181789
Number of successful extensions: 5441
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5439
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6427774254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)