ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068155.1| Oryza sativa (japonica cultivar-group) cDNA clon... 400 e-108
2ref|XM_483038.1| Oryza sativa (japonica cultivar-group), mRNA 369 8e-99
3dbj|AK100705.1| Oryza sativa (japonica cultivar-group) cDNA clon... 369 8e-99
4gb|AY107484.1| Zea mays PCO099340 mRNA sequence 303 4e-79
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 206 7e-50
6dbj|AP004376.3| Oryza sativa (japonica cultivar-group) genomic D... 206 7e-50
7dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic D... 206 7e-50
8gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome... 44 0.58
9gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.58
10gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.58
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.58
12gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome 44 0.58
13ref|XM_865751.1| PREDICTED: Bos taurus similar to SWI/SNF-relate... 42 2.3
14gb|BC063107.1| Homo sapiens cDNA clone MGC:71872 IMAGE:30325379,... 42 2.3
15emb|AL137847.12| Human DNA sequence from clone RP11-439K3 on chr... 42 2.3
16gb|AY248859.1| Plasmodium falciparum DBLd24 erythrocyte membrane... 42 2.3
17gb|AC116357.2| Homo sapiens chromosome 5 clone RP11-668G8, compl... 42 2.3
18emb|BX890605.4| Mouse DNA sequence from clone RP23-29K12 on chro... 42 2.3
19gb|AC140476.2| Homo sapiens BAC clone RP11-1294H20 from 2, compl... 42 2.3
20gb|DQ011222.1| Homo sapiens thyroid peroxidase (TPO) gene, compl... 42 2.3
21gb|AC105450.1| Homo sapiens BAC clone RP11-112B11 from 2, comple... 42 2.3
22gb|AC108462.5| Homo sapiens BAC clone RP13-542C4 from 2, complet... 42 2.3
23gb|AC108489.5| Homo sapiens BAC clone RP13-981I10 from 2, comple... 42 2.3
24dbj|AP006432.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 2.3
25ref|NM_204674.1| Gallus gallus fibroblast growth factor 19 (FGF1... 40 9.1
26gb|AC101795.9| Mus musculus chromosome 5, clone RP24-201P24, com... 40 9.1
27gb|AC107679.19| Mus musculus chromosome 1, clone RP23-256H11, co... 40 9.1
28gb|AC011761.15| Drosophila melanogaster clone BACH50G05, complet... 40 9.1
29gb|AC012650.9| Drosophila melanogaster clone BACN24N09, complete... 40 9.1
30gb|AC162884.4| Mus musculus chromosome 5, clone RP24-169E23, com... 40 9.1
31gb|AC153970.4| Mus musculus 10 BAC RP24-116A15 (Roswell Park Can... 40 9.1
32gb|AC140469.2| Mus musculus BAC clone RP24-396D20 from chromosom... 40 9.1
33gb|AC121899.3| Mus musculus BAC clone RP24-166J12 from chromosom... 40 9.1
34gb|AC124523.5| Mus musculus BAC clone RP23-399P19 from chromosom... 40 9.1
35emb|CR524825.5| Zebrafish DNA sequence from clone CH211-15N24 in... 40 9.1
36gb|AC163637.4| Mus musculus BAC clone RP23-186O3 from chromosome... 40 9.1
37gb|AC011333.7| Homo sapiens chromosome 5 clone CTC-229L21, compl... 40 9.1
38gb|AC007045.5| Arabidopsis thaliana chromosome 2 clone F23M2 map... 40 9.1
39dbj|AB168758.1| Macaca fascicularis testis cDNA, clone: QtsA-146... 40 9.1
40gb|AF314796.1|AF314796 Alectryon excelsus subsp. excelsus chloro... 40 9.1
41gb|AF314792.1|AF314792 Alectryon subdentatus chloroplast maturas... 40 9.1
42tpg|BK001076.1| TPA: TPA_exp: Mus musculus candidate taste recep... 40 9.1
43gb|AC007805.5|AC007805 Drosophila melanogaster, chromosome 3R, r... 40 9.1
44gb|AC153912.8| Mus musculus 10 BAC RP23-331E5 (Roswell Park Canc... 40 9.1
45gb|AF315355.1|AF315355 Gallus gallus fibroblast growth factor 19... 40 9.1
46gb|AC008526.5|AC008526 Homo sapiens chromosome 5 clone CTC-470C1... 40 9.1
47gb|AE003692.3| Drosophila melanogaster chromosome 3R, section 30... 40 9.1
48gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 ... 40 9.1
49gb|AC109168.10| Mus musculus chromosome 19, clone RP23-480L24, c... 40 9.1
50ref|NM_207023.1| Mus musculus taste receptor, type 2, member 120... 40 9.1
51emb|AL929508.6| Zebrafish DNA sequence from clone CH211-158G13, ... 40 9.1
52dbj|AB008817.1| Ciona savignyi mRNA for CsMA-1, complete cds 40 9.1 
>dbj|AK068155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131P05, full
            insert sequence
          Length = 1971

 Score =  400 bits (202), Expect = e-108
 Identities = 388/450 (86%), Gaps = 5/450 (1%)
 Strand = Plus / Minus

                                                                        
Query: 217  aaagcttttctccaatgacgtactgtgcttgggtaactagcctctcgacaacttcccttg 276
            ||||||||||||  ||||||| ||||||||  | ||||| ||| | ||||||||| || |
Sbjct: 1028 aaagcttttctctgatgacgtgctgtgcttcagaaactaaccttttgacaacttcactag 969

                                                                        
Query: 277  ctggtacaatctccgtgattagcccaacaccctggccagcatacatagccatgctatgga 336
            ||||||  ||||| |||||||||||||||||||| |||||||||||  |||||||||  |
Sbjct: 968  ctggtatgatctctgtgattagcccaacaccctgaccagcatacatgaccatgctatcaa 909

                                                                        
Query: 337  tatcgcctgttgttgtcgcattaggaacagtaccagcaaatcgacgtatatccttgtgca 396
            |||| |||||||||||||||||||||||||||||||| || ||||| ||||||     ||
Sbjct: 908  tatcacctgttgttgtcgcattaggaacagtaccagcgaaccgacgaatatcc-----ca 854

                                                                        
Query: 397  caccatggatgatagaatggcctataataggctgattttcctctgtttcatgatctggaa 456
            |||||||||||||||  |||||||| ||||| ||||||||||||||||| || ||||| |
Sbjct: 853  caccatggatgatagtgtggcctatgataggttgattttcctctgtttcttgttctggga 794

                                                                        
Query: 457  gattcttccactcaacatagaaaggtgtctttaggacacgttgtggagcaccaggccatc 516
            |||||||||||| | ||||||| | ||| || ||||||||||| ||||||||||||||||
Sbjct: 793  gattcttccactgatcatagaaggttgttttcaggacacgttggggagcaccaggccatc 734

                                                                        
Query: 517  tagcacgcccgaacacatttgtatagtccgtgcaattcatctcaattagcttcttcttat 576
            |||||||||| |||||||| |||||| |||||||||| ||||| |||||| | |||||||
Sbjct: 733  tagcacgcccaaacacattggtatagcccgtgcaattaatctcgattagccttttcttat 674

                                                                        
Query: 577  acagcggatgcgcaaagctttcctcggtggctacaaacctagttcctaagcaaacaccat 636
            |||  ||||| ||||| ||||| || ||||  |  |||||||||||||||||||| || |
Sbjct: 673  acaagggatgtgcaaaactttcttcagtggtcaagaacctagttcctaagcaaacgccct 614

                                          
Query: 637  gagcaccaagtgccaatgcagcagcgtagc 666
            ||||||||||||||||||||||||| ||||
Sbjct: 613  gagcaccaagtgccaatgcagcagcatagc 584
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>ref|XM_483038.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1579

 Score =  369 bits (186), Expect = 8e-99
 Identities = 333/382 (87%)
 Strand = Plus / Minus

                                                                        
Query: 217  aaagcttttctccaatgacgtactgtgcttgggtaactagcctctcgacaacttcccttg 276
            ||||||||||||  ||||||| ||||||||  | ||||| ||| | ||||||||| || |
Sbjct: 1240 aaagcttttctctgatgacgtgctgtgcttcagaaactaaccttttgacaacttcactag 1181

                                                                        
Query: 277  ctggtacaatctccgtgattagcccaacaccctggccagcatacatagccatgctatgga 336
            ||||||  ||||| |||||||||||||||||||| |||||||||||  |||||||||  |
Sbjct: 1180 ctggtatgatctctgtgattagcccaacaccctgaccagcatacatgaccatgctatcaa 1121

                                                                        
Query: 337  tatcgcctgttgttgtcgcattaggaacagtaccagcaaatcgacgtatatccttgtgca 396
            |||| |||||||||||||||||||||||||||||||| || ||||| |||||| ||||||
Sbjct: 1120 tatcacctgttgttgtcgcattaggaacagtaccagcgaaccgacgaatatccctgtgca 1061

                                                                        
Query: 397  caccatggatgatagaatggcctataataggctgattttcctctgtttcatgatctggaa 456
            |||||||||||||||  |||||||| ||||| ||||||||||||||||| || ||||| |
Sbjct: 1060 caccatggatgatagtgtggcctatgataggttgattttcctctgtttcttgttctggga 1001

                                                                        
Query: 457  gattcttccactcaacatagaaaggtgtctttaggacacgttgtggagcaccaggccatc 516
            |||||||||||| | ||||||| | ||| || ||||||||||| ||||||||||||||||
Sbjct: 1000 gattcttccactgatcatagaaggttgttttcaggacacgttggggagcaccaggccatc 941

                                                                        
Query: 517  tagcacgcccgaacacatttgtatagtccgtgcaattcatctcaattagcttcttcttat 576
            |||||||||| |||||||| |||||| |||||||||| ||||| |||||| | |||||||
Sbjct: 940  tagcacgcccaaacacattggtatagcccgtgcaattaatctcgattagccttttcttat 881

                                  
Query: 577  acagcggatgcgcaaagctttc 598
            |||  ||||| ||||| |||||
Sbjct: 880  acaagggatgtgcaaaactttc 859



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                               
Query: 615 ctagttcctaagcaaacaccatgagcaccaagtgccaatgcagcagcgtagc 666
           ||||||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct: 826 ctagttcctaagcaaacgccctgagcaccaagtgccaatgcagcagcatagc 775
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>dbj|AK100705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114P18, full
            insert sequence
          Length = 1579

 Score =  369 bits (186), Expect = 8e-99
 Identities = 333/382 (87%)
 Strand = Plus / Minus

                                                                        
Query: 217  aaagcttttctccaatgacgtactgtgcttgggtaactagcctctcgacaacttcccttg 276
            ||||||||||||  ||||||| ||||||||  | ||||| ||| | ||||||||| || |
Sbjct: 1240 aaagcttttctctgatgacgtgctgtgcttcagaaactaaccttttgacaacttcactag 1181

                                                                        
Query: 277  ctggtacaatctccgtgattagcccaacaccctggccagcatacatagccatgctatgga 336
            ||||||  ||||| |||||||||||||||||||| |||||||||||  |||||||||  |
Sbjct: 1180 ctggtatgatctctgtgattagcccaacaccctgaccagcatacatgaccatgctatcaa 1121

                                                                        
Query: 337  tatcgcctgttgttgtcgcattaggaacagtaccagcaaatcgacgtatatccttgtgca 396
            |||| |||||||||||||||||||||||||||||||| || ||||| |||||| ||||||
Sbjct: 1120 tatcacctgttgttgtcgcattaggaacagtaccagcgaaccgacgaatatccctgtgca 1061

                                                                        
Query: 397  caccatggatgatagaatggcctataataggctgattttcctctgtttcatgatctggaa 456
            |||||||||||||||  |||||||| ||||| ||||||||||||||||| || ||||| |
Sbjct: 1060 caccatggatgatagtgtggcctatgataggttgattttcctctgtttcttgttctggga 1001

                                                                        
Query: 457  gattcttccactcaacatagaaaggtgtctttaggacacgttgtggagcaccaggccatc 516
            |||||||||||| | ||||||| | ||| || ||||||||||| ||||||||||||||||
Sbjct: 1000 gattcttccactgatcatagaaggttgttttcaggacacgttggggagcaccaggccatc 941

                                                                        
Query: 517  tagcacgcccgaacacatttgtatagtccgtgcaattcatctcaattagcttcttcttat 576
            |||||||||| |||||||| |||||| |||||||||| ||||| |||||| | |||||||
Sbjct: 940  tagcacgcccaaacacattggtatagcccgtgcaattaatctcgattagccttttcttat 881

                                  
Query: 577  acagcggatgcgcaaagctttc 598
            |||  ||||| ||||| |||||
Sbjct: 880  acaagggatgtgcaaaactttc 859



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                               
Query: 615 ctagttcctaagcaaacaccatgagcaccaagtgccaatgcagcagcgtagc 666
           ||||||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct: 826 ctagttcctaagcaaacgccctgagcaccaagtgccaatgcagcagcatagc 775
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>gb|AY107484.1| Zea mays PCO099340 mRNA sequence
          Length = 1011

 Score =  303 bits (153), Expect = 4e-79
 Identities = 326/383 (85%), Gaps = 3/383 (0%)
 Strand = Plus / Minus

                                                                       
Query: 276 gctggtacaatctccgtgattagcccaacaccctggccagcatacatagccatgctatgg 335
           |||||||  |||||||||||||||||||||||||| || | |||||| |||||| | | |
Sbjct: 720 gctggtatgatctccgtgattagcccaacaccctgacccgaatacatggccatgatgtcg 661

                                                                       
Query: 336 atatcgcctgttgttgtcgcattaggaacagtaccagcaaatcgacgtatatccttgtgc 395
           ||||| |||||||  ||||| || ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 660 atatctcctgttgccgtcgcgtttggaacagtaccggcaaaccgacgaatatccttgtgc 601

                                                                       
Query: 396 acaccatggatgatagaatggcctataataggctgattttcctctgtttcatgatctgg- 454
           ||||||||||||||||| |||||||| || || |||| |||||||||||| || ||||| 
Sbjct: 600 acaccatggatgatagagtggcctatgatgggttgatcttcctctgtttcctggtctggg 541

                                                                       
Query: 455 --aagattcttccactcaacatagaaaggtgtctttaggacacgttgtggagcaccaggc 512
             |  ||||||||||||| ||||||| ||||| |  |||||||| ||||||||| |||||
Sbjct: 540 aaattattcttccactcatcatagaagggtgtttccaggacacgctgtggagcatcaggc 481

                                                                       
Query: 513 catctagcacgcccgaacacatttgtatagtccgtgcaattcatctcaattagcttcttc 572
           ||||||||||| ||||| | |||||| ||||| |||  | ||||||| |||||||| | |
Sbjct: 480 catctagcacgtccgaatatatttgtgtagtctgtgtgactcatctcgattagcttttgc 421

                                                                       
Query: 573 ttatacagcggatgcgcaaagctttcctcggtggctacaaacctagttcctaagcaaaca 632
           ||||| |  ||||| ||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 420 ttataaataggatgtgcaaagctttcctcggtagcaacaaacctagttcctaaacaaaca 361

                                  
Query: 633 ccatgagcaccaagtgccaatgc 655
           || || ||||| |||||||||||
Sbjct: 360 ccttgggcaccgagtgccaatgc 338
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  206 bits (104), Expect = 7e-50
 Identities = 179/204 (87%)
 Strand = Plus / Minus

                                                                            
Query: 395      cacaccatggatgatagaatggcctataataggctgattttcctctgtttcatgatctgg 454
                |||||||||||||||||  |||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 23983898 cacaccatggatgatagtgtggcctatgataggttgattttcctctgtttcttgttctgg 23983839

                                                                            
Query: 455      aagattcttccactcaacatagaaaggtgtctttaggacacgttgtggagcaccaggcca 514
                 ||||||||||||| | ||||||| | ||| || ||||||||||| ||||||||||||||
Sbjct: 23983838 gagattcttccactgatcatagaaggttgttttcaggacacgttggggagcaccaggcca 23983779

                                                                            
Query: 515      tctagcacgcccgaacacatttgtatagtccgtgcaattcatctcaattagcttcttctt 574
                |||||||||||| |||||||| |||||| |||||||||| ||||| |||||| | |||||
Sbjct: 23983778 tctagcacgcccaaacacattggtatagcccgtgcaattaatctcgattagccttttctt 23983719

                                        
Query: 575      atacagcggatgcgcaaagctttc 598
                |||||  ||||| ||||| |||||
Sbjct: 23983718 atacaagggatgtgcaaaactttc 23983695



 Score =  165 bits (83), Expect = 2e-37
 Identities = 155/179 (86%)
 Strand = Plus / Minus

                                                                            
Query: 217      aaagcttttctccaatgacgtactgtgcttgggtaactagcctctcgacaacttcccttg 276
                ||||||||||||  ||||||| ||||||||  | ||||| ||| | ||||||||| || |
Sbjct: 23988109 aaagcttttctctgatgacgtgctgtgcttcagaaactaaccttttgacaacttcactag 23988050

                                                                            
Query: 277      ctggtacaatctccgtgattagcccaacaccctggccagcatacatagccatgctatgga 336
                ||||||  ||||| |||||||||||||||||||| |||||||||||  |||||||||  |
Sbjct: 23988049 ctggtatgatctctgtgattagcccaacaccctgaccagcatacatgaccatgctatcaa 23987990

                                                                           
Query: 337      tatcgcctgttgttgtcgcattaggaacagtaccagcaaatcgacgtatatccttgtgc 395
                |||| |||||||||||||||||||||||||||||||| || ||||| |||||| |||||
Sbjct: 23987989 tatcacctgttgttgtcgcattaggaacagtaccagcgaaccgacgaatatccctgtgc 23987931



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                      
Query: 613      acctagttcctaagcaaacaccatgagcaccaagtgccaatgcagcagcgtagc 666
                ||||||||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct: 23983567 acctagttcctaagcaaacgccctgagcaccaagtgccaatgcagcagcatagc 23983514
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>dbj|AP004376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0481F05
          Length = 139739

 Score =  206 bits (104), Expect = 7e-50
 Identities = 179/204 (87%)
 Strand = Plus / Minus

                                                                         
Query: 395   cacaccatggatgatagaatggcctataataggctgattttcctctgtttcatgatctgg 454
             |||||||||||||||||  |||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 11298 cacaccatggatgatagtgtggcctatgataggttgattttcctctgtttcttgttctgg 11239

                                                                         
Query: 455   aagattcttccactcaacatagaaaggtgtctttaggacacgttgtggagcaccaggcca 514
              ||||||||||||| | ||||||| | ||| || ||||||||||| ||||||||||||||
Sbjct: 11238 gagattcttccactgatcatagaaggttgttttcaggacacgttggggagcaccaggcca 11179

                                                                         
Query: 515   tctagcacgcccgaacacatttgtatagtccgtgcaattcatctcaattagcttcttctt 574
             |||||||||||| |||||||| |||||| |||||||||| ||||| |||||| | |||||
Sbjct: 11178 tctagcacgcccaaacacattggtatagcccgtgcaattaatctcgattagccttttctt 11119

                                     
Query: 575   atacagcggatgcgcaaagctttc 598
             |||||  ||||| ||||| |||||
Sbjct: 11118 atacaagggatgtgcaaaactttc 11095



 Score =  165 bits (83), Expect = 2e-37
 Identities = 155/179 (86%)
 Strand = Plus / Minus

                                                                         
Query: 217   aaagcttttctccaatgacgtactgtgcttgggtaactagcctctcgacaacttcccttg 276
             ||||||||||||  ||||||| ||||||||  | ||||| ||| | ||||||||| || |
Sbjct: 15509 aaagcttttctctgatgacgtgctgtgcttcagaaactaaccttttgacaacttcactag 15450

                                                                         
Query: 277   ctggtacaatctccgtgattagcccaacaccctggccagcatacatagccatgctatgga 336
             ||||||  ||||| |||||||||||||||||||| |||||||||||  |||||||||  |
Sbjct: 15449 ctggtatgatctctgtgattagcccaacaccctgaccagcatacatgaccatgctatcaa 15390

                                                                        
Query: 337   tatcgcctgttgttgtcgcattaggaacagtaccagcaaatcgacgtatatccttgtgc 395
             |||| |||||||||||||||||||||||||||||||| || ||||| |||||| |||||
Sbjct: 15389 tatcacctgttgttgtcgcattaggaacagtaccagcgaaccgacgaatatccctgtgc 15331



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                   
Query: 613   acctagttcctaagcaaacaccatgagcaccaagtgccaatgcagcagcgtagc 666
             ||||||||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct: 10967 acctagttcctaagcaaacgccctgagcaccaagtgccaatgcagcagcatagc 10914
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>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0419H09
          Length = 143533

 Score =  206 bits (104), Expect = 7e-50
 Identities = 179/204 (87%)
 Strand = Plus / Minus

                                                                          
Query: 395    cacaccatggatgatagaatggcctataataggctgattttcctctgtttcatgatctgg 454
              |||||||||||||||||  |||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 117049 cacaccatggatgatagtgtggcctatgataggttgattttcctctgtttcttgttctgg 116990

                                                                          
Query: 455    aagattcttccactcaacatagaaaggtgtctttaggacacgttgtggagcaccaggcca 514
               ||||||||||||| | ||||||| | ||| || ||||||||||| ||||||||||||||
Sbjct: 116989 gagattcttccactgatcatagaaggttgttttcaggacacgttggggagcaccaggcca 116930

                                                                          
Query: 515    tctagcacgcccgaacacatttgtatagtccgtgcaattcatctcaattagcttcttctt 574
              |||||||||||| |||||||| |||||| |||||||||| ||||| |||||| | |||||
Sbjct: 116929 tctagcacgcccaaacacattggtatagcccgtgcaattaatctcgattagccttttctt 116870

                                      
Query: 575    atacagcggatgcgcaaagctttc 598
              |||||  ||||| ||||| |||||
Sbjct: 116869 atacaagggatgtgcaaaactttc 116846



 Score =  165 bits (83), Expect = 2e-37
 Identities = 155/179 (86%)
 Strand = Plus / Minus

                                                                          
Query: 217    aaagcttttctccaatgacgtactgtgcttgggtaactagcctctcgacaacttcccttg 276
              ||||||||||||  ||||||| ||||||||  | ||||| ||| | ||||||||| || |
Sbjct: 121260 aaagcttttctctgatgacgtgctgtgcttcagaaactaaccttttgacaacttcactag 121201

                                                                          
Query: 277    ctggtacaatctccgtgattagcccaacaccctggccagcatacatagccatgctatgga 336
              ||||||  ||||| |||||||||||||||||||| |||||||||||  |||||||||  |
Sbjct: 121200 ctggtatgatctctgtgattagcccaacaccctgaccagcatacatgaccatgctatcaa 121141

                                                                         
Query: 337    tatcgcctgttgttgtcgcattaggaacagtaccagcaaatcgacgtatatccttgtgc 395
              |||| |||||||||||||||||||||||||||||||| || ||||| |||||| |||||
Sbjct: 121140 tatcacctgttgttgtcgcattaggaacagtaccagcgaaccgacgaatatccctgtgc 121082



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                    
Query: 613    acctagttcctaagcaaacaccatgagcaccaagtgccaatgcagcagcgtagc 666
              ||||||||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct: 116718 acctagttcctaagcaaacgccctgagcaccaagtgccaatgcagcagcatagc 116665
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>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017J22, complete sequence
          Length = 177153

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 18    atatttactgttactgaatatactta 43
             |||| |||||||||||||||||||||
Sbjct: 82154 atatatactgttactgaatatactta 82129
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>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0034O12, complete sequence
          Length = 156263

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 18    atatttactgttactgaatatactta 43
             |||| |||||||||||||||||||||
Sbjct: 18303 atatatactgttactgaatatactta 18278
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>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08,
             complete sequence
          Length = 118049

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 18    atatttactgttactgaatatactta 43
             |||| |||||||||||||||||||||
Sbjct: 19954 atatatactgttactgaatatactta 19929
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 18      atatttactgttactgaatatactta 43
               |||| |||||||||||||||||||||
Sbjct: 3452672 atatatactgttactgaatatactta 3452647
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>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 158    ttcacagtttgattaccaagga 179
              ||||||||||||||||||||||
Sbjct: 875753 ttcacagtttgattaccaagga 875774
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>ref|XM_865751.1| PREDICTED: Bos taurus similar to SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin d1 isoform a
           (LOC514911), mRNA
          Length = 894

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 162 cagtttgattaccaaggactt 182
           |||||||||||||||||||||
Sbjct: 120 cagtttgattaccaaggactt 100
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>gb|BC063107.1| Homo sapiens cDNA clone MGC:71872 IMAGE:30325379, complete cds
          Length = 1190

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 217 aaagcttttctccaatgacgt 237
           |||||||||||||||||||||
Sbjct: 679 aaagcttttctccaatgacgt 699
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>emb|AL137847.12| Human DNA sequence from clone RP11-439K3 on chromosome 9q22.2-31.1
            Contains two novel genes, the 3' end of a novel gene
            (MGC20553) and a CpG island, complete sequence
          Length = 143372

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 87   accttggaaaactcatttatt 107
            |||||||||||||||||||||
Sbjct: 6866 accttggaaaactcatttatt 6886
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>gb|AY248859.1| Plasmodium falciparum DBLd24 erythrocyte membrane protein 1 (var)
           gene, partial cds
          Length = 775

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 49  agcacatacaagtacaaaactgtgg 73
           ||||||||||| |||||||||||||
Sbjct: 653 agcacatacaactacaaaactgtgg 677
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>gb|AC116357.2| Homo sapiens chromosome 5 clone RP11-668G8, complete sequence
          Length = 166827

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 89    cttggaaaactcatttatttt 109
             |||||||||||||||||||||
Sbjct: 69601 cttggaaaactcatttatttt 69621
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>emb|BX890605.4| Mouse DNA sequence from clone RP23-29K12 on chromosome 2, complete
             sequence
          Length = 148620

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 81    agggataccttggaaaactca 101
             |||||||||||||||||||||
Sbjct: 58057 agggataccttggaaaactca 58037
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>gb|AC140476.2| Homo sapiens BAC clone RP11-1294H20 from 2, complete sequence
          Length = 172117

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 217    aaagcttttctccaatgacgt 237
              |||||||||||||||||||||
Sbjct: 167192 aaagcttttctccaatgacgt 167212
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>gb|DQ011222.1| Homo sapiens thyroid peroxidase (TPO) gene, complete cds
          Length = 133236

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 217   aaagcttttctccaatgacgt 237
             |||||||||||||||||||||
Sbjct: 27423 aaagcttttctccaatgacgt 27443
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>gb|AC105450.1| Homo sapiens BAC clone RP11-112B11 from 2, complete sequence
          Length = 163782

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 217    aaagcttttctccaatgacgt 237
              |||||||||||||||||||||
Sbjct: 104336 aaagcttttctccaatgacgt 104316
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>gb|AC108462.5| Homo sapiens BAC clone RP13-542C4 from 2, complete sequence
          Length = 161648

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 217    aaagcttttctccaatgacgt 237
              |||||||||||||||||||||
Sbjct: 148067 aaagcttttctccaatgacgt 148087
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>gb|AC108489.5| Homo sapiens BAC clone RP13-981I10 from 2, complete sequence
          Length = 167463

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 217    aaagcttttctccaatgacgt 237
              |||||||||||||||||||||
Sbjct: 121849 aaagcttttctccaatgacgt 121869
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>dbj|AP006432.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT14C18, TM0330,
             complete sequence
          Length = 109258

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 90    ttggaaaactcatttattttgattg 114
             |||||||||||||||||||| ||||
Sbjct: 37078 ttggaaaactcatttattttcattg 37054
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>ref|NM_204674.1| Gallus gallus fibroblast growth factor 19 (FGF19), mRNA
          Length = 2291

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   aagggataccttggaaaact 99
            ||||||||||||||||||||
Sbjct: 1403 aagggataccttggaaaact 1422
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>gb|AC101795.9| Mus musculus chromosome 5, clone RP24-201P24, complete sequence
          Length = 170688

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 43    acaaacagcacatacaagtacaaa 66
             |||||||||||||||| |||||||
Sbjct: 25771 acaaacagcacatacatgtacaaa 25748
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>gb|AC107679.19| Mus musculus chromosome 1, clone RP23-256H11, complete sequence
          Length = 168732

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    ttggaaaactcatttatttt 109
             ||||||||||||||||||||
Sbjct: 71667 ttggaaaactcatttatttt 71686
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>gb|AC011761.15| Drosophila melanogaster clone BACH50G05, complete sequence
          Length = 108727

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     gataccttggaaaactcatt 103
              ||||||||||||||||||||
Sbjct: 104605 gataccttggaaaactcatt 104624
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>gb|AC012650.9| Drosophila melanogaster clone BACN24N09, complete sequence
          Length = 74083

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 84   gataccttggaaaactcatt 103
            ||||||||||||||||||||
Sbjct: 6417 gataccttggaaaactcatt 6436
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>gb|AC162884.4| Mus musculus chromosome 5, clone RP24-169E23, complete sequence
          Length = 158942

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 43     acaaacagcacatacaagtacaaa 66
              |||||||||||||||| |||||||
Sbjct: 110085 acaaacagcacatacatgtacaaa 110062
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>gb|AC153970.4| Mus musculus 10 BAC RP24-116A15 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 178124

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 92   ggaaaactcatttattttga 111
            ||||||||||||||||||||
Sbjct: 8046 ggaaaactcatttattttga 8065
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>gb|AC140469.2| Mus musculus BAC clone RP24-396D20 from chromosome 19, complete sequence
          Length = 180376

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    ttcaccagcactaatctgat 200
              ||||||||||||||||||||
Sbjct: 103436 ttcaccagcactaatctgat 103417
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>gb|AC121899.3| Mus musculus BAC clone RP24-166J12 from chromosome 6, complete sequence
          Length = 129975

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   tgatttggggaaaccagaaa 219
             ||||||||||||||||||||
Sbjct: 53343 tgatttggggaaaccagaaa 53362
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>gb|AC124523.5| Mus musculus BAC clone RP23-399P19 from chromosome 6, complete sequence
          Length = 188084

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    tgatttggggaaaccagaaa 219
              ||||||||||||||||||||
Sbjct: 134309 tgatttggggaaaccagaaa 134328
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>emb|CR524825.5| Zebrafish DNA sequence from clone CH211-15N24 in linkage group 16,
             complete sequence
          Length = 134382

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    tcatttattttgattggcta 118
             ||||||||||||||||||||
Sbjct: 68122 tcatttattttgattggcta 68103
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>gb|AC163637.4| Mus musculus BAC clone RP23-186O3 from chromosome 9, complete sequence
          Length = 215370

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 605    ggctacaaacctagttccta 624
              ||||||||||||||||||||
Sbjct: 210790 ggctacaaacctagttccta 210809
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>gb|AC011333.7| Homo sapiens chromosome 5 clone CTC-229L21, complete sequence
          Length = 159964

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     ttggaaaactcatttatttt 109
              ||||||||||||||||||||
Sbjct: 100993 ttggaaaactcatttatttt 101012
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>gb|AC007045.5| Arabidopsis thaliana chromosome 2 clone F23M2 map mi421, complete
            sequence
          Length = 117945

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 96   aactcatttattttgattgg 115
            ||||||||||||||||||||
Sbjct: 8542 aactcatttattttgattgg 8561
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>dbj|AB168758.1| Macaca fascicularis testis cDNA, clone: QtsA-14617, similar to human
            ribonucleotide reductase M2 polypeptide (RRM2), mRNA,
            RefSeq: NM_001034.1
          Length = 1660

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 546  gtgcaattcatctcaattagcttc 569
            |||||||||||| |||||||||||
Sbjct: 1013 gtgcaattcatcccaattagcttc 990
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>gb|AF314796.1|AF314796 Alectryon excelsus subsp. excelsus chloroplast maturase K-like
           gene, complete sequence
          Length = 1999

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  aaaaagggataccttggaaa 96
           ||||||||||||||||||||
Sbjct: 252 aaaaagggataccttggaaa 233
to top
>gb|AF314792.1|AF314792 Alectryon subdentatus chloroplast maturase K-like gene, complete
           sequence
          Length = 2085

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  aaaaagggataccttggaaa 96
           ||||||||||||||||||||
Sbjct: 242 aaaaagggataccttggaaa 223
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>tpg|BK001076.1| TPA: TPA_exp: Mus musculus candidate taste receptor mt2r47 gene,
           complete cds
          Length = 888

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 tgatttggggaaaccagaaa 219
           ||||||||||||||||||||
Sbjct: 824 tgatttggggaaaccagaaa 843
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>gb|AC007805.5|AC007805 Drosophila melanogaster, chromosome 3R, region 86F-86F, BAC clone
             BACR11G22, complete sequence
          Length = 170324

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 545   cgtgcaattcatctcaatta 564
             ||||||||||||||||||||
Sbjct: 72189 cgtgcaattcatctcaatta 72208
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>gb|AC153912.8| Mus musculus 10 BAC RP23-331E5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 206168

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    ggaaaactcatttattttga 111
             ||||||||||||||||||||
Sbjct: 58468 ggaaaactcatttattttga 58449
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>gb|AF315355.1|AF315355 Gallus gallus fibroblast growth factor 19 (fgf-19) mRNA, complete cds
          Length = 2291

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   aagggataccttggaaaact 99
            ||||||||||||||||||||
Sbjct: 1403 aagggataccttggaaaact 1422
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>gb|AC008526.5|AC008526 Homo sapiens chromosome 5 clone CTC-470C15, complete sequence
          Length = 168243

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 418    ctataataggctgattttcc 437
              ||||||||||||||||||||
Sbjct: 120718 ctataataggctgattttcc 120699
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>gb|AE003692.3| Drosophila melanogaster chromosome 3R, section 30 of 118 of the complete
              sequence
          Length = 227847

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 545    cgtgcaattcatctcaatta 564
              ||||||||||||||||||||
Sbjct: 175469 cgtgcaattcatctcaatta 175488
to top
>gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 of 74 of the
           complete sequence
          Length = 300051

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  gataccttggaaaactcatt 103
           ||||||||||||||||||||
Sbjct: 373 gataccttggaaaactcatt 354
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>gb|AC109168.10| Mus musculus chromosome 19, clone RP23-480L24, complete sequence
          Length = 190309

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    ttcaccagcactaatctgat 200
              ||||||||||||||||||||
Sbjct: 148175 ttcaccagcactaatctgat 148194
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>ref|NM_207023.1| Mus musculus taste receptor, type 2, member 120 (Tas2r120), mRNA
          Length = 888

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 tgatttggggaaaccagaaa 219
           ||||||||||||||||||||
Sbjct: 824 tgatttggggaaaccagaaa 843
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>emb|AL929508.6| Zebrafish DNA sequence from clone CH211-158G13, complete sequence
          Length = 180029

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    cttggaaaactcatttattt 108
             ||||||||||||||||||||
Sbjct: 55148 cttggaaaactcatttattt 55129
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>dbj|AB008817.1| Ciona savignyi mRNA for CsMA-1, complete cds
          Length = 1277

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 219 agcttttctccaatgacgta 238
           ||||||||||||||||||||
Sbjct: 766 agcttttctccaatgacgta 747


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,767,918
Number of Sequences: 3902068
Number of extensions: 5767918
Number of successful extensions: 114100
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113936
Number of HSP's gapped (non-prelim): 163
length of query: 666
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 643
effective length of database: 17,143,297,704
effective search space: 11023140423672
effective search space used: 11023140423672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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