ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7d02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK059085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 5e-63
2ref|XM_478206.1| Oryza sativa (japonica cultivar-group), mRNA 246 8e-62
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
4dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
5emb|AL645682.14| Mouse DNA sequence from clone RP23-287B22 on ch... 44 0.57
6gb|AC151601.5| Mus musculus BAC clone RP23-241H10 from chromosom... 42 2.3
7gb|AC126443.3| Mus musculus BAC clone RP23-464J8 from chromosome... 42 2.3
8emb|AJ830723.1| Zea mays pk8-b gene for putative protein kinase,... 42 2.3
9emb|BX901910.12| Zebrafish DNA sequence from clone DKEY-14I8 in ... 42 2.3
10gb|AC109707.5| Rattus norvegicus 13 BAC CH230-157O1 (Children's ... 42 2.3
11emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 42 2.3
12emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chro... 42 2.3
13gb|AC129555.29| Mus musculus chromosome 5, clone RP24-90F19, com... 42 2.3
14gb|AC068902.20| Mus musculus clone rp23-151l10, complete sequence 42 2.3
15gb|AY739094.1| Takifugu rubripes frCLIC6 gene, complete sequence... 40 8.9
16gb|AC140431.4| Mus musculus BAC clone RP24-172K3 from chromosome... 40 8.9
17gb|AC098890.3| Mus musculus BAC clone RP23-122P22 from X, comple... 40 8.9
18gb|AC091523.23| Mus musculus strain C57BL/6J clone rp23-77a8 map... 40 8.9
19gb|AC158930.3| Mus musculus chromosome 1, clone RP23-244J9, comp... 40 8.9
20ref|XM_796834.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 8.9
21ref|XM_796783.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 8.9
22ref|XM_775013.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 8.9
23emb|AL929295.7| Zebrafish DNA sequence from clone BUSM1-71B9 in ... 40 8.9
24emb|BX897737.7| Zebrafish DNA sequence from clone CH211-200J6 in... 40 8.9
25emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on ch... 40 8.9
26gb|AC109443.2| Homo sapiens chromosome 5 clone CTD-2070B15, comp... 40 8.9
27gb|AC016925.15|AC016925 Homo sapiens X BAC RP11-434J4 (Roswell P... 40 8.9
28gb|AC008351.4|AC008351 Drosophila melanogaster, chromosome 2R, r... 40 8.9
29gb|AC008350.4|AC008350 Drosophila melanogaster, chromosome 2R, r... 40 8.9
30gb|DQ294625.1| Yersinia enterocolitica (type 0:5) biovar 1A beta... 40 8.9
31emb|BX322631.8| Zebrafish DNA sequence from clone DKEY-173L11, c... 40 8.9
32gb|AE003458.3| Drosophila melanogaster chromosome 2R, section 66... 40 8.9
33emb|CT010481.8| M.truncatula DNA sequence from clone MTH2-62G7 o... 40 8.9
34emb|AL669958.14| Mouse DNA sequence from clone RP23-213K6 on chr... 40 8.9
35gb|M31750.1|SUSMSP130A S.purpuratus cell surface glycoprotein (m... 40 8.9

>dbj|AK059085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B03, full
           insert sequence
          Length = 821

 Score =  250 bits (126), Expect = 5e-63
 Identities = 349/422 (82%), Gaps = 1/422 (0%)
 Strand = Plus / Minus

                                                                       
Query: 231 aaagtccaggaattgattcaagggtgtacgtctctgacgtaggcaggccattctccgggg 290
           ||||||| ||||||| ||| ||| ||||| ||||||| |  | |||||||||||| ||| 
Sbjct: 583 aaagtccgggaattgcttccaggttgtacttctctgatgatgtcaggccattctctgggc 524

                                                                       
Query: 291 taggatgcgtttttgactgctccaacacattcagcgtatgaaggtaggaataggaggcat 350
              | || ||| |||  ||||||| ||| |||||| | ||||||||||| ||||||||||
Sbjct: 523 cctgctgtgttcttggttgctccagcacgttcagcttctgaaggtaggagtaggaggcat 464

                                                                       
Query: 351 tgcgatttggagccgggcttgggttggttatcttgctcgccaggaagcgccggatcaggc 410
           || ||||||| |  ||||| |||||| |||| ||||| |||||||| || | ||| || |
Sbjct: 463 tgggatttggcggtgggctcgggttgcttattttgcttgccaggaaccgtctgatgagtc 404

                                                                       
Query: 411 ccctaaggaatggagccatggtgtctggctcgtactccagaaagtacatgatccctccca 470
           | || ||||||||||||||||| |||||||| |||||||| || |||||||| || ||||
Sbjct: 403 ctctgaggaatggagccatggtatctggctcatactccaggaaatacatgattcccccca 344

                                                                       
Query: 471 tgcacaagcagaaaagacccacctccgcattttttatatttgggagaaggtggcggttga 530
           |||||| |||||||||| ||||||| || ||||| ||||||||||| || ||||||||||
Sbjct: 343 tgcacatgcagaaaagagccacctcagcgtttttaatatttgggagcagatggcggttga 284

                                                                       
Query: 531 tcaatatataccatagagattctccggcacgggggaagtacatagagagctaactccgct 590
           | ||||||||||| | ||| || || || | ||||||||||||||||||||| ||| |||
Sbjct: 283 ttaatatataccacaaagaatcccctgcgc-ggggaagtacatagagagctagctcagct 225

                                                                       
Query: 591 cttcttgctttattctccaggagaatcgaaagaccagacactaaaccaccaaaccaatac 650
           ||||| ||||| || ||||  ||||| |||||||||||||  | |||| ||||||| |||
Sbjct: 224 cttctggctttcttttccaaaagaatagaaagaccagacatcagaccagcaaaccagtac 165

             
Query: 651 ac 652
           ||
Sbjct: 164 ac 163



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>ref|XM_478206.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 402

 Score =  246 bits (124), Expect = 8e-62
 Identities = 332/400 (83%), Gaps = 1/400 (0%)
 Strand = Plus / Minus

                                                                       
Query: 231 aaagtccaggaattgattcaagggtgtacgtctctgacgtaggcaggccattctccgggg 290
           ||||||| ||||||| ||| ||| ||||| ||||||| |  | |||||||||||| ||| 
Sbjct: 400 aaagtccgggaattgcttccaggttgtacttctctgatgatgtcaggccattctctgggc 341

                                                                       
Query: 291 taggatgcgtttttgactgctccaacacattcagcgtatgaaggtaggaataggaggcat 350
              | || ||| |||  ||||||| ||| |||||| | ||||||||||| ||||||||||
Sbjct: 340 cctgctgtgttcttggttgctccagcacgttcagcttctgaaggtaggagtaggaggcat 281

                                                                       
Query: 351 tgcgatttggagccgggcttgggttggttatcttgctcgccaggaagcgccggatcaggc 410
           || ||||||| |  ||||| |||||| |||| ||||| |||||||| || | ||| || |
Sbjct: 280 tgggatttggcggtgggctcgggttgcttattttgcttgccaggaaccgtctgatgagtc 221

                                                                       
Query: 411 ccctaaggaatggagccatggtgtctggctcgtactccagaaagtacatgatccctccca 470
           | || ||||||||||||||||| |||||||| |||||||| || |||||||| || ||||
Sbjct: 220 ctctgaggaatggagccatggtatctggctcatactccaggaaatacatgattcccccca 161

                                                                       
Query: 471 tgcacaagcagaaaagacccacctccgcattttttatatttgggagaaggtggcggttga 530
           |||||| |||||||||| ||||||| || ||||| ||||||||||| || ||||||||||
Sbjct: 160 tgcacatgcagaaaagagccacctcagcgtttttaatatttgggagcagatggcggttga 101

                                                                       
Query: 531 tcaatatataccatagagattctccggcacgggggaagtacatagagagctaactccgct 590
           | ||||||||||| | ||| || || || | ||||||||||||||||||||| ||| |||
Sbjct: 100 ttaatatataccacaaagaatcccctgcgc-ggggaagtacatagagagctagctcagct 42

                                                   
Query: 591 cttcttgctttattctccaggagaatcgaaagaccagaca 630
           ||||| ||||| || ||||  ||||| |||||||||||||
Sbjct: 41  cttctggctttcttttccaaaagaatagaaagaccagaca 2



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  151 bits (76), Expect = 3e-33
 Identities = 217/264 (82%)
 Strand = Plus / Plus

                                                                            
Query: 231      aaagtccaggaattgattcaagggtgtacgtctctgacgtaggcaggccattctccgggg 290
                ||||||| ||||||| ||| ||| ||||| ||||||| |  | |||||||||||| ||| 
Sbjct: 18449910 aaagtccgggaattgcttccaggttgtacttctctgatgatgtcaggccattctctgggc 18449969

                                                                            
Query: 291      taggatgcgtttttgactgctccaacacattcagcgtatgaaggtaggaataggaggcat 350
                   | || ||| |||  ||||||| ||| |||||| | ||||||||||| ||||||||||
Sbjct: 18449970 cctgctgtgttcttggttgctccagcacgttcagcttctgaaggtaggagtaggaggcat 18450029

                                                                            
Query: 351      tgcgatttggagccgggcttgggttggttatcttgctcgccaggaagcgccggatcaggc 410
                || ||||||| |  ||||| |||||| |||| ||||| |||||||| || | ||| || |
Sbjct: 18450030 tgggatttggcggtgggctcgggttgcttattttgcttgccaggaaccgtctgatgagtc 18450089

                                                                            
Query: 411      ccctaaggaatggagccatggtgtctggctcgtactccagaaagtacatgatccctccca 470
                | || ||||||||||||||||| |||||||| |||||||| || |||||||| || ||||
Sbjct: 18450090 ctctgaggaatggagccatggtatctggctcatactccaggaaatacatgattcccccca 18450149

                                        
Query: 471      tgcacaagcagaaaagacccacct 494
                |||||| |||||||||| ||||||
Sbjct: 18450150 tgcacatgcagaaaagagccacct 18450173



 Score =  107 bits (54), Expect = 5e-20
 Identities = 136/162 (83%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                            
Query: 491      acctccgcattttttatatttgggagaaggtggcggttgatcaatatataccatagagat 550
                ||||| || ||||| ||||||||||| || ||||||||||| ||||||||||| | ||| 
Sbjct: 18450432 acctcagcgtttttaatatttgggagcagatggcggttgattaatatataccacaaagaa 18450491

                                                                            
Query: 551      tctccggcacgggggaagtacatagagagctaactccgctcttcttgctttattctccag 610
                || || || ||||| ||||||||||||||||| ||| |||||||| ||||| || |||| 
Sbjct: 18450492 tcccctgcgcgggg-aagtacatagagagctagctcagctcttctggctttcttttccaa 18450550

                                                          
Query: 611      gagaatcgaaagaccagacactaaaccaccaaaccaatacac 652
                 ||||| |||||||||||||  | |||| ||||||| |||||
Sbjct: 18450551 aagaatagaaagaccagacatcagaccagcaaaccagtacac 18450592



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>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_B11
          Length = 102824

 Score =  151 bits (76), Expect = 3e-33
 Identities = 217/264 (82%)
 Strand = Plus / Plus

                                                                         
Query: 231   aaagtccaggaattgattcaagggtgtacgtctctgacgtaggcaggccattctccgggg 290
             ||||||| ||||||| ||| ||| ||||| ||||||| |  | |||||||||||| ||| 
Sbjct: 41758 aaagtccgggaattgcttccaggttgtacttctctgatgatgtcaggccattctctgggc 41817

                                                                         
Query: 291   taggatgcgtttttgactgctccaacacattcagcgtatgaaggtaggaataggaggcat 350
                | || ||| |||  ||||||| ||| |||||| | ||||||||||| ||||||||||
Sbjct: 41818 cctgctgtgttcttggttgctccagcacgttcagcttctgaaggtaggagtaggaggcat 41877

                                                                         
Query: 351   tgcgatttggagccgggcttgggttggttatcttgctcgccaggaagcgccggatcaggc 410
             || ||||||| |  ||||| |||||| |||| ||||| |||||||| || | ||| || |
Sbjct: 41878 tgggatttggcggtgggctcgggttgcttattttgcttgccaggaaccgtctgatgagtc 41937

                                                                         
Query: 411   ccctaaggaatggagccatggtgtctggctcgtactccagaaagtacatgatccctccca 470
             | || ||||||||||||||||| |||||||| |||||||| || |||||||| || ||||
Sbjct: 41938 ctctgaggaatggagccatggtatctggctcatactccaggaaatacatgattcccccca 41997

                                     
Query: 471   tgcacaagcagaaaagacccacct 494
             |||||| |||||||||| ||||||
Sbjct: 41998 tgcacatgcagaaaagagccacct 42021



 Score =  107 bits (54), Expect = 5e-20
 Identities = 136/162 (83%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                         
Query: 491   acctccgcattttttatatttgggagaaggtggcggttgatcaatatataccatagagat 550
             ||||| || ||||| ||||||||||| || ||||||||||| ||||||||||| | ||| 
Sbjct: 42280 acctcagcgtttttaatatttgggagcagatggcggttgattaatatataccacaaagaa 42339

                                                                         
Query: 551   tctccggcacgggggaagtacatagagagctaactccgctcttcttgctttattctccag 610
             || || || ||||| ||||||||||||||||| ||| |||||||| ||||| || |||| 
Sbjct: 42340 tcccctgcgcgggg-aagtacatagagagctagctcagctcttctggctttcttttccaa 42398

                                                       
Query: 611   gagaatcgaaagaccagacactaaaccaccaaaccaatacac 652
              ||||| |||||||||||||  | |||| ||||||| |||||
Sbjct: 42399 aagaatagaaagaccagacatcagaccagcaaaccagtacac 42440



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>emb|AL645682.14| Mouse DNA sequence from clone RP23-287B22 on chromosome 11 Contains a CpG
              island, complete sequence
          Length = 198340

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 47     tatgaataaaatggctgaagaa 68
              ||||||||||||||||||||||
Sbjct: 116368 tatgaataaaatggctgaagaa 116389



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>gb|AC151601.5| Mus musculus BAC clone RP23-241H10 from chromosome 7, complete sequence
          Length = 187463

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 624   ccagacactaaaccaccaaac 644
             |||||||||||||||||||||
Sbjct: 10566 ccagacactaaaccaccaaac 10586



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>gb|AC126443.3| Mus musculus BAC clone RP23-464J8 from chromosome 7, complete sequence
          Length = 192927

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 624    ccagacactaaaccaccaaac 644
              |||||||||||||||||||||
Sbjct: 130883 ccagacactaaaccaccaaac 130903



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 624   ccagacactaaaccaccaaac 644
             |||||||||||||||||||||
Sbjct: 50001 ccagacactaaaccaccaaac 50021



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>emb|AJ830723.1| Zea mays pk8-b gene for putative protein kinase, exons 1-7
          Length = 9397

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 134  gcctacccctccagaaatgca 154
            |||||||||||||||||||||
Sbjct: 8430 gcctacccctccagaaatgca 8410



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>emb|BX901910.12| Zebrafish DNA sequence from clone DKEY-14I8 in linkage group 7,
             complete sequence
          Length = 131855

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 413   ctaaggaatggagccatggtg 433
             |||||||||||||||||||||
Sbjct: 39454 ctaaggaatggagccatggtg 39474



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>gb|AC109707.5| Rattus norvegicus 13 BAC CH230-157O1 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 205150

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 88     acaagtccccctcttttattt 108
              |||||||||||||||||||||
Sbjct: 202316 acaagtccccctcttttattt 202296



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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 144     ccagaaatgcacccatgatttgttt 168
               ||||||||||||| |||||||||||
Sbjct: 2459091 ccagaaatgcaccaatgatttgttt 2459067



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>emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chromosome 11 Contains the
             genes for olfactory receptor MOR135-14 and -3 , two
             olfactory receptor MOR135 pseudogenes, the gene for a
             novel olfactory receptor family MOR135 member, a zinc
             finger protein pseudogene, the 5' end of the gene for a
             novel KRAB box domain containing protein and a CpG island,
             complete sequence
          Length = 194873

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 624   ccagacactaaaccaccaaaccaat 648
             ||||| |||||||||||||||||||
Sbjct: 85353 ccagagactaaaccaccaaaccaat 85377



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>gb|AC129555.29| Mus musculus chromosome 5, clone RP24-90F19, complete sequence
          Length = 242141

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 588   gctcttcttgctttattctcc 608
             |||||||||||||||||||||
Sbjct: 85263 gctcttcttgctttattctcc 85243



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>gb|AC068902.20| Mus musculus clone rp23-151l10, complete sequence
          Length = 199514

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 624   ccagacactaaaccaccaaaccaat 648
             ||||| |||||||||||||||||||
Sbjct: 17430 ccagagactaaaccaccaaaccaat 17454



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>gb|AY739094.1| Takifugu rubripes frCLIC6 gene, complete sequence; frRUNX1 (frRUNX1)
             gene, complete cds; and frDONSON, frCHN1, and frFARP1L
             genes, complete sequence
          Length = 129380

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 283   ctccggggtaggatgcgtttttgactgc 310
             ||||||||||| |||||||| |||||||
Sbjct: 96849 ctccggggtagtatgcgtttgtgactgc 96822



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>gb|AC140431.4| Mus musculus BAC clone RP24-172K3 from chromosome 7, complete sequence
          Length = 172958

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 623   accagacactaaaccaccaa 642
             ||||||||||||||||||||
Sbjct: 73054 accagacactaaaccaccaa 73073



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>gb|AC098890.3| Mus musculus BAC clone RP23-122P22 from X, complete sequence
          Length = 202740

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 624   ccagacactaaaccaccaaaccaa 647
             ||||| ||||||||||||||||||
Sbjct: 72348 ccagagactaaaccaccaaaccaa 72371



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>gb|AC091523.23| Mus musculus strain C57BL/6J clone rp23-77a8 map 1, complete sequence
          Length = 235509

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 477    agcagaaaagacccacctcc 496
              ||||||||||||||||||||
Sbjct: 171628 agcagaaaagacccacctcc 171647



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>gb|AC158930.3| Mus musculus chromosome 1, clone RP23-244J9, complete sequence
          Length = 214509

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   agcagaaaagacccacctcc 496
             ||||||||||||||||||||
Sbjct: 10116 agcagaaaagacccacctcc 10135



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>ref|XM_796834.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC576568, transcript variant 3 (LOC576568), mRNA
          Length = 2788

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 582 aactccgctcttcttgcttt 601
           ||||||||||||||||||||
Sbjct: 118 aactccgctcttcttgcttt 99



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>ref|XM_796783.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC576568, transcript variant 2 (LOC576568), mRNA
          Length = 2767

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 582 aactccgctcttcttgcttt 601
           ||||||||||||||||||||
Sbjct: 118 aactccgctcttcttgcttt 99



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>ref|XM_775013.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC576568, transcript variant 1 (LOC576568), mRNA
          Length = 2551

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 582 aactccgctcttcttgcttt 601
           ||||||||||||||||||||
Sbjct: 118 aactccgctcttcttgcttt 99



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>emb|AL929295.7| Zebrafish DNA sequence from clone BUSM1-71B9 in linkage group 7
             Contains three novel genes similar to cdh1 (epithelial
             cadherin 1), complete sequence
          Length = 99338

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 566   aagtacatagagagctaact 585
             ||||||||||||||||||||
Sbjct: 58629 aagtacatagagagctaact 58648



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>emb|BX897737.7| Zebrafish DNA sequence from clone CH211-200J6 in linkage group 7,
             complete sequence
          Length = 64259

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 566   aagtacatagagagctaact 585
             ||||||||||||||||||||
Sbjct: 59563 aagtacatagagagctaact 59582



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>emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on chromosome 13 Contains
             part of the gene for a novel protein similar to axonemal
             dynein heavy polypeptide (DNAH), complete sequence
          Length = 127451

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 624   ccagacactaaaccaccaaa 643
             ||||||||||||||||||||
Sbjct: 80023 ccagacactaaaccaccaaa 80042



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>gb|AC109443.2| Homo sapiens chromosome 5 clone CTD-2070B15, complete sequence
          Length = 123037

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     agagtacatatataactcct 23
             ||||||||||||||||||||
Sbjct: 41688 agagtacatatataactcct 41707



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>gb|AC016925.15|AC016925 Homo sapiens X BAC RP11-434J4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 133615

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 525   ggttgatcaatatataccat 544
             ||||||||||||||||||||
Sbjct: 61690 ggttgatcaatatataccat 61671



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>gb|AC008351.4|AC008351 Drosophila melanogaster, chromosome 2R, region 59A-59C, BAC clone
            BACR09K23, complete sequence
          Length = 191438

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 629  cactaaaccaccaaaccaat 648
            ||||||||||||||||||||
Sbjct: 3899 cactaaaccaccaaaccaat 3880



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>gb|AC008350.4|AC008350 Drosophila melanogaster, chromosome 2R, region 58E-59A, BAC clone
              BACR11M08, complete sequence
          Length = 169534

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 629    cactaaaccaccaaaccaat 648
              ||||||||||||||||||||
Sbjct: 156611 cactaaaccaccaaaccaat 156592



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>gb|DQ294625.1| Yersinia enterocolitica (type 0:5) biovar 1A beta-lactamase class
           A-like (blaA) gene, partial sequence
          Length = 361

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 46  gtatgaataaaatggctgaa 65
           ||||||||||||||||||||
Sbjct: 228 gtatgaataaaatggctgaa 247



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>emb|BX322631.8| Zebrafish DNA sequence from clone DKEY-173L11, complete sequence
          Length = 161710

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 566   aagtacatagagagctaact 585
             ||||||||||||||||||||
Sbjct: 85470 aagtacatagagagctaact 85451



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>gb|AE003458.3| Drosophila melanogaster chromosome 2R, section 66 of 73 of the complete
              sequence
          Length = 302225

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 629    cactaaaccaccaaaccaat 648
              ||||||||||||||||||||
Sbjct: 167093 cactaaaccaccaaaccaat 167074



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>emb|CT010481.8| M.truncatula DNA sequence from clone MTH2-62G7 on chromosome 3,
             complete sequence
          Length = 113400

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   catgatttgtttattacaat 176
             ||||||||||||||||||||
Sbjct: 83890 catgatttgtttattacaat 83871



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>emb|AL669958.14| Mouse DNA sequence from clone RP23-213K6 on chromosome X, complete
              sequence
          Length = 195411

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 624    ccagacactaaaccaccaaaccaa 647
              ||||| ||||||||||||||||||
Sbjct: 139274 ccagagactaaaccaccaaaccaa 139297



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>gb|M31750.1|SUSMSP130A S.purpuratus cell surface glycoprotein (msp130) gene, 5' flank and
           exon 1
          Length = 1165

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 582 aactccgctcttcttgcttt 601
           ||||||||||||||||||||
Sbjct: 786 aactccgctcttcttgcttt 767


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,724,050
Number of Sequences: 3902068
Number of extensions: 5724050
Number of successful extensions: 98695
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98550
Number of HSP's gapped (non-prelim): 141
length of query: 652
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 629
effective length of database: 17,143,297,704
effective search space: 10783134255816
effective search space used: 10783134255816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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