>emb|AL008638.1|HS992D9 Human DNA sequence from clone CTA-992D9 on chromosome 22q12.1, complete
             sequence
          Length = 155147

 Score = 42.1 bits (21), Expect = 0.26
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 8     cttcctagatcatggctaaga 28
             |||||||||||||||||||||
Sbjct: 24527 cttcctagatcatggctaaga 24507

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 0.26
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 43      ttgatgccgccgatgacctggttcggcgc 71
               ||||| |||||| ||||||||||||||||
Sbjct: 1688433 ttgatcccgccgctgacctggttcggcgc 1688405

>gb|AC155818.5| Mus musculus BAC clone RP23-397H1 from chromosome 8, complete sequence
          Length = 191112

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     tcatggctaagatccaccac 36
              ||||||||||||||||||||
Sbjct: 173811 tcatggctaagatccaccac 173792

>gb|AC165964.3| Mus musculus BAC clone RP23-334H24 from chromosome 8, complete sequence
          Length = 233538

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    tcatggctaagatccaccac 36
             ||||||||||||||||||||
Sbjct: 53853 tcatggctaagatccaccac 53834

>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 41      gcttgatgccgccgatgacctggt 64
               ||||||||||||| ||||||||||
Sbjct: 1587850 gcttgatgccgccaatgacctggt 1587827

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     gccgatgacctggttcggcg 70
              ||||||||||||||||||||
Sbjct: 858973 gccgatgacctggttcggcg 858954

>gb|DQ306260.1| Rhodococcus sp. T104 p-cumate-degrading gene cluster, complete sequence
          Length = 42397

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    gccgccgatgacctggttcg 67
             ||||||||||||||||||||
Sbjct: 26309 gccgccgatgacctggttcg 26290

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 60      ctggttcggcgccggcatg 78
               |||||||||||||||||||
Sbjct: 5156844 ctggttcggcgccggcatg 5156826

>gb|AE012090.1| Xanthomonas axonopodis pv. citri str. 306,  section 468 of 469 of the
            complete genome
          Length = 10947

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 60   ctggttcggcgccggcatg 78
            |||||||||||||||||||
Sbjct: 3453 ctggttcggcgccggcatg 3435

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 48      gccgccgatgacctggttcggcg 70
               ||||||||||| |||||||||||
Sbjct: 2412333 gccgccgatgaactggttcggcg 2412311

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 47      tgccgccgatgacctggttcggc 69
               ||||| |||||||||||||||||
Sbjct: 8156649 tgccgacgatgacctggttcggc 8156671

>dbj|AK071803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111M02, full
           insert sequence
          Length = 2047

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 42  cttgatgccgccgatgacc 60
           |||||||||||||||||||
Sbjct: 609 cttgatgccgccgatgacc 591


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 563,783
Number of Sequences: 3902068
Number of extensions: 563783
Number of successful extensions: 27594
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27315
Number of HSP's gapped (non-prelim): 279
length of query: 94
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 73
effective length of database: 17,151,101,840
effective search space: 1252030434320
effective search space used: 1252030434320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)