ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6n20 |
|---|---|
| Clone Library Name | barley_pub |
>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 2) Length = 371 Score = 238 bits (606), Expect = 1e-62 Identities = 117/125 (93%), Positives = 119/125 (95%) Frame = -2 Query: 557 EGVLRLXKSDFREPVNIGSDEMVSMNEMXEIVLGFENKQLPIHHIPGPEGVRGRNSDNTL 378 EGVLRL KSDFREPVNIGSDEMVSMNEM EIVL FENKQLPIHHIPGPEGVRGRNSDNTL Sbjct: 247 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPGPEGVRGRNSDNTL 306 Query: 377 IKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKSEGADVSAYGSSKVCTTQAPVQLGSLRA 198 IKEKLGWAPTMRLKDGLRITYFWIKEQLEKEK+EG D+SAYGSSKV TQAPVQLGSLRA Sbjct: 307 IKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKAEGVDLSAYGSSKVVQTQAPVQLGSLRA 366 Query: 197 ADGKE 183 ADGKE Sbjct: 367 ADGKE 371
>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 1) (OsGME-1) Length = 378 Score = 227 bits (579), Expect = 1e-59 Identities = 107/125 (85%), Positives = 118/125 (94%) Frame = -2 Query: 557 EGVLRLXKSDFREPVNIGSDEMVSMNEMXEIVLGFENKQLPIHHIPGPEGVRGRNSDNTL 378 EGVLRL KSDFREPVNIGSDEMVSMNEM EI+L FE+++LPIHHIPGPEGVRGRNSDNTL Sbjct: 254 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPGPEGVRGRNSDNTL 313 Query: 377 IKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKSEGADVSAYGSSKVCTTQAPVQLGSLRA 198 IKEKLGWAPTM+LKDGLR TYFWIKEQ+EKEK++G D++ YGSSKV +TQAPVQLGSLRA Sbjct: 314 IKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAGYGSSKVVSTQAPVQLGSLRA 373 Query: 197 ADGKE 183 ADGKE Sbjct: 374 ADGKE 378
>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man| 3,5-epimerase) Length = 377 Score = 224 bits (571), Expect = 1e-58 Identities = 109/125 (87%), Positives = 116/125 (92%) Frame = -2 Query: 557 EGVLRLXKSDFREPVNIGSDEMVSMNEMXEIVLGFENKQLPIHHIPGPEGVRGRNSDNTL 378 EGVLRL KSDFREPVNIGSDEMVSMNEM E+VL FE K+LPIHHIPGPEGVRGRNSDN L Sbjct: 253 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNL 312 Query: 377 IKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKSEGADVSAYGSSKVCTTQAPVQLGSLRA 198 IKEKLGWAP MRLK+GLRITYFWIKEQ+EKEK++G+DVS YGSSKV TQAPVQLGSLRA Sbjct: 313 IKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSSKVVGTQAPVQLGSLRA 372 Query: 197 ADGKE 183 ADGKE Sbjct: 373 ADGKE 377
>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) (AtGER2) Length = 328 Score = 47.4 bits (111), Expect = 3e-05 Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 3/83 (3%) Frame = -2 Query: 521 EPVNIGSDEMVSMNEMXEIV---LGFENKQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAP 351 E VN+GS V++ E+ E+V +GF+ K + P+G + D++ + LGW P Sbjct: 248 EHVNVGSGVEVTIKELAELVKEVVGFKGKL--VWDTTKPDGTPRKLMDSSKLAS-LGWTP 304 Query: 350 TMRLKDGLRITYFWIKEQLEKEK 282 + LKDGL TY W E + ++K Sbjct: 305 KISLKDGLSQTYEWYLENVVQKK 327
>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) Length = 328 Score = 46.2 bits (108), Expect = 6e-05 Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 3/83 (3%) Frame = -2 Query: 521 EPVNIGSDEMVSMNEMXEIV---LGFENKQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAP 351 E VN+GS V++ E+ E+V +GF+ K + P+G + D++ I+E +GW P Sbjct: 248 EHVNVGSGSEVTIKELAELVKEVVGFQGKL--VWDSSKPDGTPRKLMDSSKIQE-MGWKP 304 Query: 350 TMRLKDGLRITYFWIKEQLEKEK 282 + LK+GL TY W E + K Sbjct: 305 KVPLKEGLVETYKWYVENVISAK 327
>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) (AtGER1) (AtFX) Length = 312 Score = 43.9 bits (102), Expect = 3e-04 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Frame = -2 Query: 521 EPVNIGSDEMVSMNEMXEIV---LGFENKQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAP 351 E VNIGS + V++ E+ E+V +GFE K P+G + D++ + LGW P Sbjct: 234 EHVNIGSGQEVTIRELAELVKEVVGFEGKLG--WDCTKPDGTPRKLMDSSKLAS-LGWTP 290 Query: 350 TMRLKDGLRITYFW 309 + L+DGL TY W Sbjct: 291 KVSLRDGLSQTYDW 304
>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) Length = 347 Score = 43.1 bits (100), Expect = 5e-04 Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 2/87 (2%) Frame = -2 Query: 551 VLRLXKSDFREPVNIGSDEMVSMNEMXEIVLGFENKQ-LPIHHIPGPEGVRGRNSDNTLI 375 V+ + + E VN+GS E V++ E+ E V G + + PEGV R D+ + Sbjct: 254 VVLMERYSGEEHVNVGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRM 313 Query: 374 KEKLGWAPTMRLKDGLRITY-FWIKEQ 297 + KLGW P + L+DG++ Y F+++ + Sbjct: 314 R-KLGWEPRVALRDGIQDLYRFYLRHE 339
>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 418 Score = 41.6 bits (96), Expect = 0.002 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 1/91 (1%) Frame = -2 Query: 554 GVLRLXKSDFREPVNIGSDEMVSMNEMXEIVLGFENKQLPIHHIP-GPEGVRGRNSDNTL 378 G++ L S+ PVN+G+ E ++ E +++ + I +P + + R D Sbjct: 306 GLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRK 365 Query: 377 IKEKLGWAPTMRLKDGLRITYFWIKEQLEKE 285 K LGW P + L++GL T + +LE + Sbjct: 366 AKLLLGWEPVVPLEEGLNKTIQYFSRELEHQ 396
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 38.1 bits (87), Expect = 0.017 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 1/89 (1%) Frame = -2 Query: 554 GVLRLXKSDFREPVNIGSDEMVSMNEMXEIVLGFENKQLPIHHIP-GPEGVRGRNSDNTL 378 G++ L S+ PVN+G+ E ++ E +++ I + + + R D Sbjct: 308 GLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKK 367 Query: 377 IKEKLGWAPTMRLKDGLRITYFWIKEQLE 291 K LGW P + L++GL + +++LE Sbjct: 368 AKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 38.1 bits (87), Expect = 0.017 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 1/89 (1%) Frame = -2 Query: 554 GVLRLXKSDFREPVNIGSDEMVSMNEMXEIVLGFENKQLPIHHIP-GPEGVRGRNSDNTL 378 G++ L S+ PVN+G+ E ++ E +++ I + + + R D Sbjct: 308 GLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKK 367 Query: 377 IKEKLGWAPTMRLKDGLRITYFWIKEQLE 291 K LGW P + L++GL + +++LE Sbjct: 368 AKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 38.1 bits (87), Expect = 0.017 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 1/89 (1%) Frame = -2 Query: 554 GVLRLXKSDFREPVNIGSDEMVSMNEMXEIVLGFENKQLPIHHIP-GPEGVRGRNSDNTL 378 G++ L S+ PVN+G+ E ++ E +++ I + + + R D Sbjct: 308 GLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKK 367 Query: 377 IKEKLGWAPTMRLKDGLRITYFWIKEQLE 291 K LGW P + L++GL + +++LE Sbjct: 368 AKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 38.1 bits (87), Expect = 0.017 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 1/89 (1%) Frame = -2 Query: 554 GVLRLXKSDFREPVNIGSDEMVSMNEMXEIVLGFENKQLPIHHIP-GPEGVRGRNSDNTL 378 G++ L S+ PVN+G+ E ++ E +++ I + + + R D Sbjct: 308 GLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKK 367 Query: 377 IKEKLGWAPTMRLKDGLRITYFWIKEQLE 291 K LGW P + L++GL + +++LE Sbjct: 368 AKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>GALE_METJA (Q57664) Putative UDP-glucose 4-epimerase (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 305 Score = 36.6 bits (83), Expect = 0.049 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%) Frame = -2 Query: 521 EPVNIGSDEMVSMNEMXEIV---LGFENKQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAP 351 E VNIG+ + S+NE+ +I+ +GF + + + EG R + E LGW P Sbjct: 228 EIVNIGTGKETSVNELFDIIKHEIGFRGEAI---YDKPREGEVYRIYLDIKKAESLGWKP 284 Query: 350 TMRLKDGLRITYFWIK 303 + LK+G++ W+K Sbjct: 285 EIDLKEGIKRVVNWMK 300
>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 421 Score = 36.2 bits (82), Expect = 0.064 Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 1/91 (1%) Frame = -2 Query: 554 GVLRLXKSDFREPVNIGSDEMVSMNEMXEIVLGFENKQLPIHHIP-GPEGVRGRNSDNTL 378 G++ L S+ PVN+G+ + S+ + ++ I + + + R D Sbjct: 309 GLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRRKPDIRK 368 Query: 377 IKEKLGWAPTMRLKDGLRITYFWIKEQLEKE 285 K LGW P + L++GL T + +++LE + Sbjct: 369 AKLLLGWEPVVPLEEGLNKTIHYFRKELEHQ 399
>RMLB_STRMU (P95780) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 348 Score = 33.5 bits (75), Expect = 0.41 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 3/98 (3%) Frame = -2 Query: 542 LXKSDFREPVNIGSDEMVSMNEMXEIVLG-FENKQLPIHHIPGPEGVRGRNS-DNTLIKE 369 L K E IG+D + E+ E++L + H+ G R + D+T ++E Sbjct: 241 LTKGRIGETYLIGADGEKNNKEVLELILEKMSQPKNAYDHVTDRAGHDLRYAIDSTKLRE 300 Query: 368 KLGWAPTM-RLKDGLRITYFWIKEQLEKEKSEGADVSA 258 +LGW P ++GL T W E + K+E V A Sbjct: 301 ELGWKPQFTNFEEGLEDTIKWYTEHEDWWKAEKEAVEA 338
>Y2889_PHOPR (Q6LN94) UPF0247 protein PBPRA2889| Length = 156 Score = 33.1 bits (74), Expect = 0.54 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%) Frame = -2 Query: 446 KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQ 297 K +P+ I P G RG+N+D I +K G A + G RI W + +Q Sbjct: 29 KDMPLELIEIPAGKRGKNADIARILQKEGEAMLATVAKGNRIVTLDIPGKRWDTGQLAQQ 88 Query: 296 LEKEKSEGADVS 261 L+ K +G DVS Sbjct: 89 LDSWKLDGRDVS 100
>Y1298_PHOLL (Q7N760) UPF0247 protein plu1298| Length = 156 Score = 32.7 bits (73), Expect = 0.71 Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 10/72 (13%) Frame = -2 Query: 446 KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQ 297 K +P I P G RG+N+D I EK G + G RI W + +Q Sbjct: 29 KDMPFDLIEIPAGKRGKNADIKRILEKEGEQMLAAVSKGSRIVTLDIPGSRWETPQLAQQ 88 Query: 296 LEKEKSEGADVS 261 LE K +G DVS Sbjct: 89 LEHWKRDGRDVS 100
>MA1A2_HUMAN (O60476) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB) (Mannosidase alpha class 1A member 2) Length = 641 Score = 32.7 bits (73), Expect = 0.71 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 2/108 (1%) Frame = -2 Query: 548 LRLXKSDFREPVNIGSDEMVSMNEMXEIVLGFENKQLPIHHIPGPEGVRGRNSDNTLIKE 369 LR + + R + +++V ++ E NK LP IP G+RG + ++ I+E Sbjct: 126 LRKSREEIRAEIQTEKNKVVQEMKIKE------NKPLPPVPIPNLVGIRGGDPEDNDIRE 179 Query: 368 KLGWAPTM--RLKDGLRITYFWIKEQLEKEKSEGADVSAYGSSKVCTT 231 K M D R TY W +L +G + +GSS++ T Sbjct: 180 KREKIKEMMKHAWDNYR-TYGWGHNELRPIARKGHSPNIFGSSQMGAT 226
>Y1304_ERWCT (Q6D7M1) UPF0247 protein ECA1304| Length = 156 Score = 31.6 bits (70), Expect = 1.6 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 10/72 (13%) Frame = -2 Query: 446 KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQ 297 K +P + P G RG+N+D I E+ G + G RI W + +Q Sbjct: 29 KDMPFELLEIPAGKRGKNADIKRILEREGEQMLAAVGKGNRIVTLDIPGTRWETPHLAQQ 88 Query: 296 LEKEKSEGADVS 261 LE+ K +G DVS Sbjct: 89 LERWKQDGRDVS 100
>Y041_HAEI8 (Q4QPL1) UPF0247 protein NTHI0041| Length = 155 Score = 31.6 bits (70), Expect = 1.6 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 15/83 (18%) Frame = -2 Query: 467 IVLGFEN------KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF-- 312 + GFE K +P I P G RG+N+D I E+ G A G +T Sbjct: 16 VTTGFEEYQRRFPKDMPFELIEIPAGKRGKNADIKRILEQEGKAMLAACGKGKVVTLDIP 75 Query: 311 ---W----IKEQLEKEKSEGADV 264 W + EQLE K++G DV Sbjct: 76 GKPWTTPQLAEQLEAWKNDGCDV 98
>Y033_HAEIN (P44470) UPF0247 protein HI0033| Length = 155 Score = 31.2 bits (69), Expect = 2.1 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 15/83 (18%) Frame = -2 Query: 467 IVLGFEN------KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF-- 312 + GFE K +P I P G RG+N+D I E+ G A G +T Sbjct: 16 VTTGFEEYQRRFPKDMPFELIEIPAGKRGKNADIKRILEQEGKAMLAACGKGKVVTLDIP 75 Query: 311 ---W----IKEQLEKEKSEGADV 264 W + EQLE K++G DV Sbjct: 76 GKPWTTPQLAEQLEAWKNDGRDV 98
>STRE_STRGR (P29782) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 328 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = -2 Query: 512 NIGSDEMVSMNEMXEIVLGFENKQL-PIHHIPGPEGVRGRNS-DNTLIKEKLGWAPTMRL 339 NIG +S E+ ++L + ++ +G R + D+T I+ +LG+AP + L Sbjct: 240 NIGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAVDL 299 Query: 338 KDGLRITYFW 309 DGL T W Sbjct: 300 ADGLAATVAW 309
>CASP2_HUMAN (P42575) Caspase-2 precursor (EC 3.4.22.-) (CASP-2) (ICH-1| protease) (ICH-1L/1S) [Contains: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12] Length = 452 Score = 30.4 bits (67), Expect = 3.5 Identities = 28/102 (27%), Positives = 44/102 (43%) Frame = +3 Query: 150 QLLSLPRRECSLLAICGAEGAKLDRCLRGADLG*SVCRHVCAFGFFLLQLLLDPKIRDPQ 329 +L S PR +L+ G K G D+ S + + + +L D ++ Q Sbjct: 193 RLQSRPRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVHVLCDQTAQEMQ 252 Query: 330 PILQPHGWSPAKLLLDECVVRVTATDALGARDVVDGQLLVLE 455 LQ PA + D C+V + + GA VDG+LL L+ Sbjct: 253 EKLQNFAQLPAHRVTDSCIVALLSHGVEGAIYGVDGKLLQLQ 294
>ESR1_ICTPU (Q9YHZ7) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)| Length = 617 Score = 30.0 bits (66), Expect = 4.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -3 Query: 460 WASRTSSCPSTTSLAPRASVAVTLTT 383 WA R SS P+TT+ P + T TT Sbjct: 564 WADRVSSSPTTTATTPTTNTTTTTTT 589
>NOLK_AZOCA (P33217) Nodulation protein nolK| Length = 312 Score = 29.6 bits (65), Expect = 6.0 Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%) Frame = -2 Query: 515 VNIGSDEMVSMNEMXEIV---LGFENKQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTM 345 +N+G + +S+ E +V +G+ + ++ + P G+R + D T + LGW P Sbjct: 235 MNVGVGKDLSVLEYYSLVARVIGWSGEF--VYDLNRPVGMRSKLMDITHLTA-LGWVPER 291 Query: 344 RLKDGLRITY 315 L+ G+R TY Sbjct: 292 SLEGGIRSTY 301
>Y1923_PASMU (Q9CJR9) UPF0247 protein PM1923| Length = 155 Score = 29.6 bits (65), Expect = 6.0 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 15/84 (17%) Frame = -2 Query: 467 IVLGFEN------KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF-- 312 + +GFE K++P I P G RG+N+D I E+ G A +T Sbjct: 16 VTMGFEEYQRRFPKEMPFELIEIPAGKRGKNADIKRILEQEGKAMLAACGKSRIVTLDIP 75 Query: 311 ---WIKE----QLEKEKSEGADVS 261 W E QLE K++G D+S Sbjct: 76 GKPWTTEQLATQLEVWKNDGRDLS 99
>Y723_VIBPA (Q87RQ4) UPF0247 protein VP0723| Length = 156 Score = 29.6 bits (65), Expect = 6.0 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 10/70 (14%) Frame = -2 Query: 440 LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQLE 291 +P+ + G RG+N+D I +K G A + G RI W + EQLE Sbjct: 31 MPLELVEISAGKRGKNADIARILQKEGEAMLAAVPKGNRIVTLDIPGKKWDTPQLAEQLE 90 Query: 290 KEKSEGADVS 261 K +G DVS Sbjct: 91 AWKLDGRDVS 100
>Y907_VIBVY (Q7MN10) UPF0247 protein VV0907| Length = 156 Score = 29.3 bits (64), Expect = 7.8 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 10/70 (14%) Frame = -2 Query: 440 LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQLE 291 +P+ I G RG+N+D I +K G A + G RI W + +QLE Sbjct: 31 MPLELIEITAGKRGKNADIARILQKEGEAMLAAIPKGNRIVTLDIPGKKWDTPELAQQLE 90 Query: 290 KEKSEGADVS 261 K +G DVS Sbjct: 91 AWKLDGRDVS 100
>Y749_VIBF1 (Q5E6V2) UPF0247 protein VF0749| Length = 156 Score = 29.3 bits (64), Expect = 7.8 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 10/72 (13%) Frame = -2 Query: 446 KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQ 297 K +P+ + G RG+N+D I +K G A + G RI W + EQ Sbjct: 29 KDMPLELVEITAGKRGKNADIARILQKEGEAMLAAVPKGNRIVTLDIPGKRWDTEQLAEQ 88 Query: 296 LEKEKSEGADVS 261 LE K + DVS Sbjct: 89 LEAWKLDARDVS 100
>Y277_VIBVU (Q8DFD8) UPF0247 protein VV1_0277| Length = 156 Score = 29.3 bits (64), Expect = 7.8 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 10/70 (14%) Frame = -2 Query: 440 LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQLE 291 +P+ I G RG+N+D I +K G A + G RI W + +QLE Sbjct: 31 MPLELIEITAGKRGKNADIARILQKEGEAMLAAIPKGNRIVTLDIPGKKWDTPELAQQLE 90 Query: 290 KEKSEGADVS 261 K +G DVS Sbjct: 91 AWKLDGRDVS 100
>Y2605_YERPE (Q8ZDG3) UPF0247 protein YPO2605/y1179/YP1108| Length = 156 Score = 29.3 bits (64), Expect = 7.8 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 10/72 (13%) Frame = -2 Query: 446 KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQ 297 K +P P G RG+N+D I EK G + RI W + +Q Sbjct: 29 KDMPFELAEIPAGKRGKNADIKRILEKEGELMLAAVGKNNRIVTLDIPGTPWETPQLAQQ 88 Query: 296 LEKEKSEGADVS 261 LE+ K +G DVS Sbjct: 89 LERWKQDGRDVS 100
>Y1098_YERPS (Q66DE8) UPF0247 protein YPTB1098| Length = 156 Score = 29.3 bits (64), Expect = 7.8 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 10/72 (13%) Frame = -2 Query: 446 KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQ 297 K +P P G RG+N+D I EK G + RI W + +Q Sbjct: 29 KDMPFELAEIPAGKRGKNADIKRILEKEGELMLAAVGKNNRIVTLDIPGTPWETPQLAQQ 88 Query: 296 LEKEKSEGADVS 261 LE+ K +G DVS Sbjct: 89 LERWKQDGRDVS 100
>SO1C1_HUMAN (Q9NYB5) Solute carrier organic anion transporter family member 1C1| (Solute carrier family 21 member 14) (Organic anion transporter F) (OATP-F) (Organic anion-transporting polypeptide 14) (Organic anion transporter polypeptide-related protein Length = 712 Score = 29.3 bits (64), Expect = 7.8 Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 6/113 (5%) Frame = +1 Query: 223 GACVVQTLDDPYXXXXXXXXXXXXXXXLIQKYVILSPSFSLMVGAQPSFSLMSV------ 384 G +Q L Y +Q I+ P F ++G+ + + + Sbjct: 200 GETPIQPLGIAYLDDFASEDNAAFYIGCVQTVAIIGPIFGFLLGSLCAKLYVDIGFVNLD 259 Query: 385 LSELRPRTPSGPGMWWMGSCLFSKPRTISXISFMLTISSLPMFTGSRKSDFXS 543 + P+ P G WW+G + ++ + F SLP S+ S Sbjct: 260 HITITPKDPQWVGAWWLGYLIAGIISLLAAVPFWYLPKSLPRSQSREDSNSSS 312
>WAC_BPT4 (P10104) Fibritin (Whisker antigen control protein) (Collar| protein) Length = 486 Score = 29.3 bits (64), Expect = 7.8 Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 6/105 (5%) Frame = -2 Query: 515 VNIGSDEMVSMNEMXEIVLGFENKQLPIHHIPG----PEGVRGRNSDNTLIKEKLGWAPT 348 VN +D + S+N G + + I G P ++G+ DNT E L Sbjct: 268 VNTNTDNIASINLELNQSGGIKQRLTVIETSIGSDDIPSSIKGQIKDNTTSIESLNGIVG 327 Query: 347 MRLKDGLRITYFWIKEQLEKEKSEGADVSAYGS--SKVCTTQAPV 219 GLR W+ Q+ S G S GS ++V T + V Sbjct: 328 ENTSSGLRANVSWL-NQIVGTDSSGGQPSPPGSLLNRVSTIETSV 371
>YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'region (ORF2)| Length = 334 Score = 29.3 bits (64), Expect = 7.8 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%) Frame = -2 Query: 512 NIGSD---EMVSMNEMXEIVLGFENKQ--LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPT 348 NIG+ E++ + E LG E K+ LP+ P V ++D + E +G+ P Sbjct: 259 NIGNSSPVELMDYIQALEDALGIEAKKNMLPLQ----PGDVLETSADTKALYEVIGFTPE 314 Query: 347 MRLKDGLRITYFWIKE 300 +KDG++ W ++ Sbjct: 315 TTVKDGVKNFVNWYRD 330
>YQAK_BACSU (P45908) Hypothetical protein yqaK| Length = 284 Score = 29.3 bits (64), Expect = 7.8 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -2 Query: 365 LGWAPTMRLKDGLRITYFWIKEQLEKEKSE 276 +G+A L +G R T +W K Q+EK K + Sbjct: 158 IGYAAYFELINGFRKTVYWTKAQVEKHKKK 187 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,082,570 Number of Sequences: 219361 Number of extensions: 1539318 Number of successful extensions: 4469 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 4324 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4464 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
