ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags6n20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091C16, full insert sequence Length = 1533 Score = 369 bits (186), Expect = 7e-99 Identities = 333/380 (87%), Gaps = 2/380 (0%) Strand = Plus / Minus Query: 180 tcactccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgca 239 ||||||||| ||||| || || ||||||||||||||||| ||||| ||||| || |||| Sbjct: 1191 tcactcctttccatcagcagcacggagggagccaagctgcaccggcgcctgagtc-tgca 1133 Query: 240 g-accttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagct 298 ||||||||||| ||||| ||||||| ||| |||| |||| || |||||||| |||| Sbjct: 1132 ctaccttggatgacccgtaggccgacaagtcgacgccctcggccttctccttctcgagct 1073 Query: 299 gctccttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagccc 358 ||||||||||||| || || ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1072 gctccttgatccagaagtatgtgatcctcagaccatccttcagcctcatggttggagccc 1013 Query: 359 agccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggc 418 ||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| || | Sbjct: 1012 agccaagcttctctttgatgagcgtgttgtcggagttgcgaccacggacaccctctggcc 953 Query: 419 cagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagncatct 478 | |||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||| Sbjct: 952 cggggatgtggtggatgggcagctgcttgttctcaaagctgaggactatctcagccatct 893 Query: 479 cgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagactttg 538 | |||||||| |||||||||||||| || |||||||||||||| |||||||| ||||||| Sbjct: 892 cattcatgctgaccatttcatcacttccaatgtttacaggctcacggaaatcggactttg 833 Query: 539 ngagcctgaggacaccctcc 558 | |||||||||||||||| Sbjct: 832 tcaacctgaggacaccctcc 813
>gb|AY106775.1| Zea mays PCO117540 mRNA sequence Length = 541 Score = 305 bits (154), Expect = 8e-80 Identities = 281/321 (87%), Gaps = 2/321 (0%) Strand = Plus / Minus Query: 178 gttcactccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtg 237 ||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| || || Sbjct: 321 gttcactccttgccatcagcggcgcggagggagccgagctgaaccggggcctgtgtc-tg 263 Query: 238 ca-gaccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccag 296 || |||||||||||||||||| |||||| || ||| |||| || |||||||| || Sbjct: 262 cacgaccttggatgatccgtagaccgacagatccatgccctcggccttctccttctcaag 203 Query: 297 ctgctccttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagc 356 ||||||||||||||| | ||||||||||||||||| |||||||||||||| || ||||| Sbjct: 202 ctgctccttgatccaggagtacgtgatcctcagcccgtccttcagcctcatagtcggagc 143 Query: 357 ccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggg 416 |||||||||||||||||||||||| |||||||| ||||| || ||||| |||||||| || Sbjct: 142 ccagccaagcttctccttgatgagcgtgttgtctgagttgcgcccacgcacgccctccgg 83 Query: 417 gccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagncat 476 || |||||||||||||||||||||||||||||||| |||| |||||| || || | ||| Sbjct: 82 cccggggatgtggtggatgggcagctgcttgttctcaaagctcaggaccatttccgccat 23 Query: 477 ctcgttcatgctcaccatttc 497 ||||||||||||||||||||| Sbjct: 22 ctcgttcatgctcaccatttc 2
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 256 bits (129), Expect = 7e-65 Identities = 185/204 (90%) Strand = Plus / Plus Query: 335 ccttcagcctcatggttggagcccagccaagcttctccttgatgagtgtgttgtcagagt 394 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 130017 ccttcagcctcatggttggagcccagccaagcttctctttgatgagcgtgttgtcggagt 130076 Query: 395 tacggccacggacgccctcggggccagggatgtggtggatgggcagctgcttgttctcga 454 | || |||||||| ||||| || || |||||||||||||||||||||||||||||||| | Sbjct: 130077 tgcgaccacggacaccctctggcccggggatgtggtggatgggcagctgcttgttctcaa 130136 Query: 455 agcccaggactatctcagncatctcgttcatgctcaccatttcatcactcccgatgttta 514 ||| ||||||||||||| |||||| |||||||| |||||||||||||| || ||||||| Sbjct: 130137 agctgaggactatctcagccatctcattcatgctgaccatttcatcacttccaatgttta 130196 Query: 515 caggctcgcggaaatcagactttg 538 ||||||| |||||||| ||||||| Sbjct: 130197 caggctcacggaaatcggactttg 130220 Score = 101 bits (51), Expect = 2e-18 Identities = 134/159 (84%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 180 tcactccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgca 239 ||||||||| ||||| || || ||||||||||||||||| ||||| ||||| || |||| Sbjct: 129759 tcactcctttccatcagcagcacggagggagccaagctgcaccggcgcctgagtc-tgca 129817 Query: 240 g-accttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagct 298 ||||||||||| ||||| ||||||| ||| |||| |||| || |||||||| |||| Sbjct: 129818 ctaccttggatgacccgtaggccgacaagtcgacgccctcggccttctccttctcgagct 129877 Query: 299 gctccttgatccaaaaatacgtgatcctcagcccatcct 337 ||||||||||||| || || ||||||||||| ||||||| Sbjct: 129878 gctccttgatccagaagtatgtgatcctcagaccatcct 129916 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 430 tggatgggcagctgcttgttctcgaagc 457 ||||| ||||||||||||||||| |||| Sbjct: 11890 tggataggcagctgcttgttctctaagc 11917
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 256 bits (129), Expect = 7e-65 Identities = 185/204 (90%) Strand = Plus / Plus Query: 335 ccttcagcctcatggttggagcccagccaagcttctccttgatgagtgtgttgtcagagt 394 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 21606498 ccttcagcctcatggttggagcccagccaagcttctctttgatgagcgtgttgtcggagt 21606557 Query: 395 tacggccacggacgccctcggggccagggatgtggtggatgggcagctgcttgttctcga 454 | || |||||||| ||||| || || |||||||||||||||||||||||||||||||| | Sbjct: 21606558 tgcgaccacggacaccctctggcccggggatgtggtggatgggcagctgcttgttctcaa 21606617 Query: 455 agcccaggactatctcagncatctcgttcatgctcaccatttcatcactcccgatgttta 514 ||| ||||||||||||| |||||| |||||||| |||||||||||||| || ||||||| Sbjct: 21606618 agctgaggactatctcagccatctcattcatgctgaccatttcatcacttccaatgttta 21606677 Query: 515 caggctcgcggaaatcagactttg 538 ||||||| |||||||| ||||||| Sbjct: 21606678 caggctcacggaaatcggactttg 21606701 Score = 101 bits (51), Expect = 2e-18 Identities = 134/159 (84%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 180 tcactccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgca 239 ||||||||| ||||| || || ||||||||||||||||| ||||| ||||| || |||| Sbjct: 21606240 tcactcctttccatcagcagcacggagggagccaagctgcaccggcgcctgagtc-tgca 21606298 Query: 240 g-accttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagct 298 ||||||||||| ||||| ||||||| ||| |||| |||| || |||||||| |||| Sbjct: 21606299 ctaccttggatgacccgtaggccgacaagtcgacgccctcggccttctccttctcgagct 21606358 Query: 299 gctccttgatccaaaaatacgtgatcctcagcccatcct 337 ||||||||||||| || || ||||||||||| ||||||| Sbjct: 21606359 gctccttgatccagaagtatgtgatcctcagaccatcct 21606397 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 430 tggatgggcagctgcttgttctcgaagc 457 ||||| ||||||||||||||||| |||| Sbjct: 21488371 tggataggcagctgcttgttctctaagc 21488398
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 256 bits (129), Expect = 7e-65 Identities = 185/204 (90%) Strand = Plus / Plus Query: 335 ccttcagcctcatggttggagcccagccaagcttctccttgatgagtgtgttgtcagagt 394 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 21916697 ccttcagcctcatggttggagcccagccaagcttctctttgatgagcgtgttgtcggagt 21916756 Query: 395 tacggccacggacgccctcggggccagggatgtggtggatgggcagctgcttgttctcga 454 | || |||||||| ||||| || || |||||||||||||||||||||||||||||||| | Sbjct: 21916757 tgcgaccacggacaccctctggcccggggatgtggtggatgggcagctgcttgttctcaa 21916816 Query: 455 agcccaggactatctcagncatctcgttcatgctcaccatttcatcactcccgatgttta 514 ||| ||||||||||||| |||||| |||||||| |||||||||||||| || ||||||| Sbjct: 21916817 agctgaggactatctcagccatctcattcatgctgaccatttcatcacttccaatgttta 21916876 Query: 515 caggctcgcggaaatcagactttg 538 ||||||| |||||||| ||||||| Sbjct: 21916877 caggctcacggaaatcggactttg 21916900 Score = 101 bits (51), Expect = 2e-18 Identities = 134/159 (84%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 180 tcactccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgca 239 ||||||||| ||||| || || ||||||||||||||||| ||||| ||||| || |||| Sbjct: 21916439 tcactcctttccatcagcagcacggagggagccaagctgcaccggcgcctgagtc-tgca 21916497 Query: 240 g-accttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagct 298 ||||||||||| ||||| ||||||| ||| |||| |||| || |||||||| |||| Sbjct: 21916498 ctaccttggatgacccgtaggccgacaagtcgacgccctcggccttctccttctcgagct 21916557 Query: 299 gctccttgatccaaaaatacgtgatcctcagcccatcct 337 ||||||||||||| || || ||||||||||| ||||||| Sbjct: 21916558 gctccttgatccagaagtatgtgatcctcagaccatcct 21916596 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 430 tggatgggcagctgcttgttctcgaagc 457 ||||| ||||||||||||||||| |||| Sbjct: 21798570 tggataggcagctgcttgttctctaagc 21798597
>ref|NM_196510.1| Oryza sativa (japonica cultivar-group) putative epimerase/dehydratase (OSJNBa0061K21.15), mRNA Length = 1137 Score = 226 bits (114), Expect = 6e-56 Identities = 296/357 (82%) Strand = Plus / Minus Query: 182 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 241 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 1135 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 1076 Query: 242 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 301 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 1075 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 1016 Query: 302 ccttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagcccagc 361 |||||||||| || || |||| ||||||||| ||||| ||| |||| || || ||||||| Sbjct: 1015 ccttgatccagaagtaggtgaacctcagcccgtccttgagcttcattgtgggtgcccagc 956 Query: 362 caagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggccag 421 ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||| Sbjct: 955 caagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcgggtccag 896 Query: 422 ggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagncatctcgt 481 ||||||||||||||||||||| | | | |||||||| || | || |||| |||||||| Sbjct: 895 ggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagccatctcgt 836 Query: 482 tcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagactttg 538 ||||||| ||||||||||| || || ||||| || ||||| ||||| || ||||||| Sbjct: 835 tcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgactttg 779
>dbj|AB193582.1| Oryza sativa (japonica cultivar-group) OsGME-1 mRNA for GDP-mannose-3'',5''-epimerase, complete cds Length = 1212 Score = 226 bits (114), Expect = 6e-56 Identities = 296/357 (82%) Strand = Plus / Minus Query: 182 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 241 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 1171 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 1112 Query: 242 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 301 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 1111 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 1052 Query: 302 ccttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagcccagc 361 |||||||||| || || |||| ||||||||| ||||| ||| |||| || || ||||||| Sbjct: 1051 ccttgatccagaagtaggtgaacctcagcccgtccttgagcttcattgtgggtgcccagc 992 Query: 362 caagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggccag 421 ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||| Sbjct: 991 caagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcgggtccag 932 Query: 422 ggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagncatctcgt 481 ||||||||||||||||||||| | | | |||||||| || | || |||| |||||||| Sbjct: 931 ggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagccatctcgt 872 Query: 482 tcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagactttg 538 ||||||| ||||||||||| || || ||||| || ||||| ||||| || ||||||| Sbjct: 871 tcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgactttg 815
>dbj|AK104822.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-B04, full insert sequence Length = 1587 Score = 226 bits (114), Expect = 6e-56 Identities = 296/357 (82%) Strand = Plus / Minus Query: 182 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 241 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 1256 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 1197 Query: 242 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 301 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 1196 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 1137 Query: 302 ccttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagcccagc 361 |||||||||| || || |||| ||||||||| ||||| ||| |||| || || ||||||| Sbjct: 1136 ccttgatccagaagtaggtgaacctcagcccgtccttgagcttcattgtgggtgcccagc 1077 Query: 362 caagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggccag 421 ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||| Sbjct: 1076 caagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcgggtccag 1017 Query: 422 ggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagncatctcgt 481 ||||||||||||||||||||| | | | |||||||| || | || |||| |||||||| Sbjct: 1016 ggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagccatctcgt 957 Query: 482 tcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagactttg 538 ||||||| ||||||||||| || || ||||| || ||||| ||||| || ||||||| Sbjct: 956 tcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgactttg 900
>dbj|AK069385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012D14, full insert sequence Length = 1592 Score = 226 bits (114), Expect = 6e-56 Identities = 296/357 (82%) Strand = Plus / Minus Query: 182 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 241 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 1261 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 1202 Query: 242 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 301 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 1201 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 1142 Query: 302 ccttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagcccagc 361 |||||||||| || || |||| ||||||||| ||||| ||| |||| || || ||||||| Sbjct: 1141 ccttgatccagaagtaggtgaacctcagcccgtccttgagcttcattgtgggtgcccagc 1082 Query: 362 caagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggccag 421 ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||| Sbjct: 1081 caagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcgggtccag 1022 Query: 422 ggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagncatctcgt 481 ||||||||||||||||||||| | | | |||||||| || | || |||| |||||||| Sbjct: 1021 ggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagccatctcgt 962 Query: 482 tcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagactttg 538 ||||||| ||||||||||| || || ||||| || ||||| ||||| || ||||||| Sbjct: 961 tcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgactttg 905
>gb|AY104279.1| Zea mays PCO103545 mRNA sequence Length = 1547 Score = 214 bits (108), Expect = 2e-52 Identities = 215/251 (85%) Strand = Plus / Minus Query: 286 tccttctccagctgctccttgatccaaaaatacgtgatcctcagcccatccttcagcctc 345 |||||||| | |||||| |||||||| || || |||| || |||||||||||| ||| || Sbjct: 1150 tccttctcgatctgctctttgatccagaagtaggtgaaccgcagcccatccttgagcttc 1091 Query: 346 atggttggagcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacgg 405 || || || ||||||||||||||||||||||| || |||||||||||||| || || ||| Sbjct: 1090 atcgtcggggcccagccaagcttctccttgataagggtgttgtcagagttgcgcccgcgg 1031 Query: 406 acgccctcggggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggact 465 || || || |||||||||||||||||||||||||||| | | | ||| |||||||| || Sbjct: 1030 accccttccgggccagggatgtggtggatgggcagcttcctatcctcaaagcccagcacg 971 Query: 466 atctcagncatctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcgg 525 ||||||| ||||||||||||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 970 atctcagccatctcgttcatgctcaccatctcatcgcttccgatgttcactggctcgcgg 911 Query: 526 aaatcagactt 536 || || ||||| Sbjct: 910 aagtctgactt 900 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 183 ctccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtgg 235 ||||||||| || ||||||||||||||||| ||||| || || ||||| |||| Sbjct: 1253 ctccttgccgtcggcggcgcggagggagcccagctgcacgggcgcctgggtgg 1201
>gb|BT016578.1| Zea mays clone Contig411 mRNA sequence Length = 1538 Score = 202 bits (102), Expect = 9e-49 Identities = 200/233 (85%) Strand = Plus / Minus Query: 304 ttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagcccagcca 363 |||||||| || || |||| || |||||||||||| ||| |||| || || ||||||||| Sbjct: 1130 ttgatccagaagtaggtgaaccgcagcccatccttgagcttcatcgtcggggcccagcca 1071 Query: 364 agcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggccaggg 423 |||||||||||||| || |||||||||||||| || || ||||| || || ||||||||| Sbjct: 1070 agcttctccttgataagggtgttgtcagagttgcgcccgcggaccccttccgggccaggg 1011 Query: 424 atgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagncatctcgttc 483 ||||||||||||||||||| | | | ||| |||||||| || ||||||| |||||||||| Sbjct: 1010 atgtggtggatgggcagcttcctatcctcaaagcccagcacgatctcagccatctcgttc 951 Query: 484 atgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagactt 536 ||||||||||| ||||| || |||||||| || ||||||||||| || ||||| Sbjct: 950 atgctcaccatctcatcgcttccgatgttcactggctcgcggaagtctgactt 898 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 183 ctccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtgg 235 ||||||||| || |||| |||||||||||| ||||| || || ||||| |||| Sbjct: 1251 ctccttgccgtcggcggggcggagggagcccagctgcacgggcgcctgggtgg 1199
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence Length = 112721 Score = 176 bits (89), Expect = 5e-41 Identities = 160/184 (86%) Strand = Plus / Minus Query: 355 gcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcg 414 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 68168 gcccagccaagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcg 68109 Query: 415 gggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagnc 474 || ||||||||||||||||||||||||| | | | |||||||| || | || |||| | Sbjct: 68108 ggtccagggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagcc 68049 Query: 475 atctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagac 534 |||||||||||||| ||||||||||| || || ||||| || ||||| ||||| || ||| Sbjct: 68048 atctcgttcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgac 67989 Query: 535 tttg 538 |||| Sbjct: 67988 tttg 67985 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Minus Query: 182 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 241 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 68474 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 68415 Query: 242 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 301 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 68414 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 68355 Query: 302 ccttgatccaaaaatacgtgatcctcagcccatcct 337 |||||||||| || || |||| ||||||||| |||| Sbjct: 68354 ccttgatccagaagtaggtgaacctcagcccgtcct 68319
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 176 bits (89), Expect = 5e-41 Identities = 160/184 (86%) Strand = Plus / Minus Query: 355 gcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcg 414 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 14128530 gcccagccaagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcg 14128471 Query: 415 gggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagnc 474 || ||||||||||||||||||||||||| | | | |||||||| || | || |||| | Sbjct: 14128470 ggtccagggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagcc 14128411 Query: 475 atctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagac 534 |||||||||||||| ||||||||||| || || ||||| || ||||| ||||| || ||| Sbjct: 14128410 atctcgttcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgac 14128351 Query: 535 tttg 538 |||| Sbjct: 14128350 tttg 14128347 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Minus Query: 182 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 241 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 14128836 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 14128777 Query: 242 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 301 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 14128776 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 14128717 Query: 302 ccttgatccaaaaatacgtgatcctcagcccatcct 337 |||||||||| || || |||| ||||||||| |||| Sbjct: 14128716 ccttgatccagaagtaggtgaacctcagcccgtcct 14128681
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 176 bits (89), Expect = 5e-41 Identities = 160/184 (86%) Strand = Plus / Minus Query: 355 gcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcg 414 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 603 gcccagccaagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcg 544 Query: 415 gggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagnc 474 || ||||||||||||||||||||||||| | | | |||||||| || | || |||| | Sbjct: 543 ggtccagggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagcc 484 Query: 475 atctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagac 534 |||||||||||||| ||||||||||| || || ||||| || ||||| ||||| || ||| Sbjct: 483 atctcgttcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgac 424 Query: 535 tttg 538 |||| Sbjct: 423 tttg 420 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Minus Query: 182 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 241 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 909 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 850 Query: 242 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 301 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 849 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 790 Query: 302 ccttgatccaaaaatacgtgatcctcagcccatcct 337 |||||||||| || || |||| ||||||||| |||| Sbjct: 789 ccttgatccagaagtaggtgaacctcagcccgtcct 754
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 176 bits (89), Expect = 5e-41 Identities = 160/184 (86%) Strand = Plus / Minus Query: 355 gcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcg 414 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 14136772 gcccagccaagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcg 14136713 Query: 415 gggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagnc 474 || ||||||||||||||||||||||||| | | | |||||||| || | || |||| | Sbjct: 14136712 ggtccagggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagcc 14136653 Query: 475 atctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagac 534 |||||||||||||| ||||||||||| || || ||||| || ||||| ||||| || ||| Sbjct: 14136652 atctcgttcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgac 14136593 Query: 535 tttg 538 |||| Sbjct: 14136592 tttg 14136589 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Minus Query: 182 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 241 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 14137078 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 14137019 Query: 242 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 301 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 14137018 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 14136959 Query: 302 ccttgatccaaaaatacgtgatcctcagcccatcct 337 |||||||||| || || |||| ||||||||| |||| Sbjct: 14136958 ccttgatccagaagtaggtgaacctcagcccgtcct 14136923
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 161 bits (81), Expect = 3e-36 Identities = 152/176 (86%) Strand = Plus / Minus Query: 363 aagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggccagg 422 |||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 144651 aagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcgggtccagg 144592 Query: 423 gatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagncatctcgtt 482 |||||||||||||||||||| | | | |||||||| || | || |||| ||||||||| Sbjct: 144591 gatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagccatctcgtt 144532 Query: 483 catgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagactttg 538 |||||| ||||||||||| || || ||||| || ||||| ||||| || ||||||| Sbjct: 144531 catgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgactttg 144476
>gb|BT013590.1| Lycopersicon esculentum clone 132353F, mRNA sequence Length = 1880 Score = 147 bits (74), Expect = 5e-32 Identities = 184/221 (83%) Strand = Plus / Minus Query: 301 tccttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagcccag 360 ||||| ||||| |||||||| ||||||| ||||||||||| | |||| | ||||||||| Sbjct: 1199 tcctttatccagaaatacgtaatcctcaacccatccttcaacttcatattaggagcccag 1140 Query: 361 ccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggcca 420 |||||||| ||||||||||| |||||||||||||| || ||||| || ||||| || || Sbjct: 1139 ccaagcttttccttgatgagagtgttgtcagagtttcgaccacgcacaccctctggtcct 1080 Query: 421 gggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagncatctcg 480 || ||||| ||||| || || | |||| || |||| ||||||||||| | |||||| Sbjct: 1079 ggaatgtgatggatcggaaggttcttgccatcaaagctgaggactatctctgccatctca 1020 Query: 481 ttcatgctcaccatttcatcactcccgatgtttacaggctc 521 |||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 1019 ttcatgcttaccatctcatcacttccgatgttcacaggctc 979
>gb|DQ268848.1| Solanum tuberosum clone 155B09 NAD-dependent epimerase/dehydratase family protein-like protein mRNA, complete cds Length = 1521 Score = 137 bits (69), Expect = 4e-29 Identities = 203/248 (81%) Strand = Plus / Minus Query: 280 gatttttccttctccagctgctccttgatccaaaaatacgtgatcctcagcccatccttc 339 ||||| || ||||| | ||||||||||||||| || || || || ||||| ||||||||| Sbjct: 1055 gatttctctttctcgatctgctccttgatccagaagtatgtaattctcagaccatccttc 996 Query: 340 agcctcatggttggagcccagccaagcttctccttgatgagtgtgttgtcagagttacgg 399 | ||||| ||||||||||| ||||||||||| || || ||||||||||| ||||| || Sbjct: 995 aatctcattgttggagcccaaccaagcttctcttttatcagtgtgttgtctgagttgcga 936 Query: 400 ccacggacgccctcggggccagggatgtggtggatgggcagctgcttgttctcgaagccc 459 ||||||||||| || ||||| || ||||| |||| | |||| ||||| ||| |||| Sbjct: 935 ccacggacgccttctgggcctggaatgtgttggacagcaagcttcttgtcctcaaagctg 876 Query: 460 aggactatctcagncatctcgttcatgctcaccatttcatcactcccgatgtttacaggc 519 || || ||||||| |||||| |||||||| ||||| |||||||| || ||||| || ||| Sbjct: 875 agaaccatctcagccatctcattcatgctgaccatctcatcacttcctatgttcactggc 816 Query: 520 tcgcggaa 527 || ||||| Sbjct: 815 tctcggaa 808
>gb|DQ207722.1| Zea mays cultivar B73 IDP512 marker Length = 527 Score = 111 bits (56), Expect = 2e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 355 gcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcg 414 ||||||||||||||||||||||| || |||||||||||||| || || ||||| || || Sbjct: 371 gcccagccaagcttctccttgataagggtgttgtcagagttgcgcccgcggaccccttcc 430 Query: 415 gggccagggatgtggtggatgggcagct 442 |||||||||||||||||||||||||||| Sbjct: 431 gggccagggatgtggtggatgggcagct 458 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 183 ctccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtgg 235 ||||||||| || ||||||||||||||||| ||||| || || ||||| |||| Sbjct: 107 ctccttgccgtcggcggcgcggagggagcccagctgcacgggcgcctgggtgg 159 Score = 40.1 bits (20), Expect = 7.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 286 tccttctccagctgctccttgatccaaaaatacgtgatcctcagcccatcct 337 |||||||| | |||||| |||||||| || || |||| || ||||||||||| Sbjct: 210 tccttctcgatctgctctttgatccagaagtaggtgaaccgcagcccatcct 261
>ref|NM_122767.2| Arabidopsis thaliana GDP-mannose 3,5-epimerase/ catalytic AT5G28840 mRNA, complete cds Length = 1611 Score = 105 bits (53), Expect = 2e-19 Identities = 165/203 (81%) Strand = Plus / Minus Query: 352 ggagcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccc 411 |||||||| |||||||| || ||||| || ||||||| |||||||| ||||| || || Sbjct: 1140 ggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccacgaacacct 1081 Query: 412 tcggggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctca 471 || |||||||| |||||||| || || |||| ||| | ||| |||| || || |||||| Sbjct: 1080 tccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaaccatctca 1021 Query: 472 gncatctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatca 531 | |||||| |||||||||||||| ||||| || |||||||| || ||||| |||||||| Sbjct: 1020 gccatctcattcatgctcaccatctcatcgcttccgatgttcaccggctcacggaaatct 961 Query: 532 gactttgngagcctgaggacacc 554 || |||| | |||||| ||||| Sbjct: 960 gattttgtcaacctgagtacacc 938
>gb|AY116953.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1134 Score = 105 bits (53), Expect = 2e-19 Identities = 165/203 (81%) Strand = Plus / Minus Query: 352 ggagcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccc 411 |||||||| |||||||| || ||||| || ||||||| |||||||| ||||| || || Sbjct: 962 ggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccacgaacacct 903 Query: 412 tcggggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctca 471 || |||||||| |||||||| || || |||| ||| | ||| |||| || || |||||| Sbjct: 902 tccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaaccatctca 843 Query: 472 gncatctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatca 531 | |||||| |||||||||||||| ||||| || |||||||| || ||||| |||||||| Sbjct: 842 gccatctcattcatgctcaccatctcatcgcttccgatgttcaccggctcacggaaatct 783 Query: 532 gactttgngagcctgaggacacc 554 || |||| | |||||| ||||| Sbjct: 782 gattttgtcaacctgagtacacc 760
>gb|AY057694.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1404 Score = 105 bits (53), Expect = 2e-19 Identities = 165/203 (81%) Strand = Plus / Minus Query: 352 ggagcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccc 411 |||||||| |||||||| || ||||| || ||||||| |||||||| ||||| || || Sbjct: 1025 ggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccacgaacacct 966 Query: 412 tcggggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctca 471 || |||||||| |||||||| || || |||| ||| | ||| |||| || || |||||| Sbjct: 965 tccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaaccatctca 906 Query: 472 gncatctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatca 531 | |||||| |||||||||||||| ||||| || |||||||| || ||||| |||||||| Sbjct: 905 gccatctcattcatgctcaccatctcatcgcttccgatgttcaccggctcacggaaatct 846 Query: 532 gactttgngagcctgaggacacc 554 || |||| | |||||| ||||| Sbjct: 845 gattttgtcaacctgagtacacc 823
>gb|AY057660.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1452 Score = 105 bits (53), Expect = 2e-19 Identities = 165/203 (81%) Strand = Plus / Minus Query: 352 ggagcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccc 411 |||||||| |||||||| || ||||| || ||||||| |||||||| ||||| || || Sbjct: 1025 ggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccacgaacacct 966 Query: 412 tcggggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctca 471 || |||||||| |||||||| || || |||| ||| | ||| |||| || || |||||| Sbjct: 965 tccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaaccatctca 906 Query: 472 gncatctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatca 531 | |||||| |||||||||||||| ||||| || |||||||| || ||||| |||||||| Sbjct: 905 gccatctcattcatgctcaccatctcatcgcttccgatgttcaccggctcacggaaatct 846 Query: 532 gactttgngagcctgaggacacc 554 || |||| | |||||| ||||| Sbjct: 845 gattttgtcaacctgagtacacc 823
>gb|AF272706.1|F7P1 Arabidopsis thaliana BAC F7P1 Length = 110714 Score = 103 bits (52), Expect = 6e-19 Identities = 147/179 (82%) Strand = Plus / Plus Query: 352 ggagcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccc 411 |||||||| |||||||| || ||||| || ||||||| |||||||| ||||| || || Sbjct: 18922 ggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccacgaacacct 18981 Query: 412 tcggggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctca 471 || |||||||| |||||||| || || |||| ||| | ||| |||| || || |||||| Sbjct: 18982 tccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaaccatctca 19041 Query: 472 gncatctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatc 530 | |||||| |||||||||||||| ||||| || |||||||| || ||||| |||||||| Sbjct: 19042 gccatctcattcatgctcaccatctcatcgcttccgatgttcaccggctcacggaaatc 19100
>dbj|AK118786.1| Arabidopsis thaliana mRNA, clone: RAFL21-11-O14 Length = 550 Score = 103 bits (52), Expect = 6e-19 Identities = 147/179 (82%) Strand = Plus / Plus Query: 352 ggagcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccc 411 |||||||| |||||||| || ||||| || ||||||| |||||||| ||||| || || Sbjct: 7 ggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccacgaacacct 66 Query: 412 tcggggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctca 471 || |||||||| |||||||| || || |||| ||| | ||| |||| || || |||||| Sbjct: 67 tccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaaccatctca 126 Query: 472 gncatctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatc 530 | |||||| |||||||||||||| ||||| || |||||||| || ||||| |||||||| Sbjct: 127 gccatctcattcatgctcaccatctcatcgcttccgatgttcaccggctcacggaaatc 185
>gb|DQ207723.1| Zea mays cultivar inbred line Mo17 IDP512 marker Length = 473 Score = 99.6 bits (50), Expect = 9e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 355 gcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcg 414 ||||||||||||||||||||||| || |||||||||||||| || || ||||| || || Sbjct: 379 gcccagccaagcttctccttgataagggtgttgtcagagttgcgcccgcggaccccttcc 438 Query: 415 gggccagggatgtggtggatgg 436 |||||||||||||||||||||| Sbjct: 439 gggccagggatgtggtggatgg 460 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 183 ctccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtgg 235 ||||||||| || ||||||||||||||||| ||||| || || ||||| |||| Sbjct: 115 ctccttgccgtcggcggcgcggagggagcccagctgcacgggcgcctgggtgg 167 Score = 40.1 bits (20), Expect = 7.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 286 tccttctccagctgctccttgatccaaaaatacgtgatcctcagcccatcct 337 |||||||| | |||||| |||||||| || || |||| || ||||||||||| Sbjct: 218 tccttctcgatctgctctttgatccagaagtaggtgaaccgcagcccatcct 269
>ref|XM_322466.1| Neurospora crassa OR74A hypothetical protein (NCU00381.1) partial mRNA Length = 3465 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 aacatcctcttgcgccaagcag 55 |||||||||||||||||||||| Sbjct: 3161 aacatcctcttgcgccaagcag 3182
>ref|XM_952174.1| Neurospora crassa OR74A hypothetical protein (NCU00381.1) partial mRNA Length = 3465 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 aacatcctcttgcgccaagcag 55 |||||||||||||||||||||| Sbjct: 3161 aacatcctcttgcgccaagcag 3182
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 taaatggtgtgacaactgacaa 148 |||||||||||||||||||||| Sbjct: 6185581 taaatggtgtgacaactgacaa 6185560
>gb|AC099781.2| Homo sapiens chromosome 3 clone RP11-791E14, complete sequence Length = 200704 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 acatttaaaatgtttaacatta 31 |||||||||||||||||||||| Sbjct: 79419 acatttaaaatgtttaacatta 79440
>emb|BX569778.15| Zebrafish DNA sequence from clone DKEY-21J8 in linkage group 1, complete sequence Length = 255895 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 7 tgtacatttaaaatgtttaacattaa 32 |||||||||||||||||||| ||||| Sbjct: 32752 tgtacatttaaaatgtttaagattaa 32777
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 taaatggtgtgacaactgacaa 148 |||||||||||||||||||||| Sbjct: 6184794 taaatggtgtgacaactgacaa 6184773
>gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0090D11, complete sequence Length = 115403 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 taaatggtgtgacaactgacaa 148 |||||||||||||||||||||| Sbjct: 24192 taaatggtgtgacaactgacaa 24171
>emb|CT486003.10| Mouse DNA sequence from clone RP23-415F11 on chromosome 14, complete sequence Length = 181037 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 491 ccatttcatcactcccgatgtttaca 516 ||||||||||||||| |||||||||| Sbjct: 92740 ccatttcatcactcctgatgtttaca 92765
>ref|XM_714481.1| Candida albicans SC5314 hypothetical protein (CaO19_9547), mRNA Length = 2130 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 ccttctccagctgctccttga 307 ||||||||||||||||||||| Sbjct: 1538 ccttctccagctgctccttga 1518
>ref|XM_714352.1| Candida albicans SC5314 hypothetical protein (CaO19_1995), mRNA Length = 2130 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 ccttctccagctgctccttga 307 ||||||||||||||||||||| Sbjct: 1538 ccttctccagctgctccttga 1518
>ref|XM_848981.1| PREDICTED: Canis familiaris similar to NACHT, LRR and PYD containing protein 10 (LOC611323), mRNA Length = 2061 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 287 ccttctccagctgctccttgatcca 311 ||||||||| ||||||||||||||| Sbjct: 1108 ccttctccatctgctccttgatcca 1084
>emb|CR654217.2|CNS0F3RJ Tetraodon nigroviridis full-length cDNA Length = 1435 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ttccttctccagctgctcctt 305 ||||||||||||||||||||| Sbjct: 146 ttccttctccagctgctcctt 126
>emb|CR645237.2|CNS0EWU3 Tetraodon nigroviridis full-length cDNA Length = 1432 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ttccttctccagctgctcctt 305 ||||||||||||||||||||| Sbjct: 139 ttccttctccagctgctcctt 119
>emb|CR394544.15| Zebrafish DNA sequence from clone DKEY-117I6 in linkage group 7, complete sequence Length = 194826 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ttacatgtacatttaaaatgt 22 ||||||||||||||||||||| Sbjct: 160622 ttacatgtacatttaaaatgt 160642
>ref|XM_499876.1| Yarrowia lipolytica CLIB122, YALI0A08448g predicted mRNA Length = 993 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 tccttctccagctgctccttg 306 ||||||||||||||||||||| Sbjct: 785 tccttctccagctgctccttg 765
>ref|XM_793921.1| PREDICTED: Strongylocentrotus purpuratus similar to SLIT-ROBO Rho GTPase activating protein 3 (LOC594484), mRNA Length = 1425 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 ccttctccagctgctccttga 307 ||||||||||||||||||||| Sbjct: 34 ccttctccagctgctccttga 14
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 cttcggatttttccttctcca 295 ||||||||||||||||||||| Sbjct: 845570 cttcggatttttccttctcca 845550
>gb|AC134698.10| Homo sapiens chromosome 8, clone RP11-359P18, complete sequence Length = 173305 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 418 ccagggatgtggtggatgggc 438 ||||||||||||||||||||| Sbjct: 131613 ccagggatgtggtggatgggc 131633
>emb|BX470095.12| Zebrafish DNA sequence from clone DKEY-162H1 in linkage group 24, complete sequence Length = 209513 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atgtacatttaaaatgtttaa 26 ||||||||||||||||||||| Sbjct: 186453 atgtacatttaaaatgtttaa 186433
>emb|BX119966.7| Zebrafish DNA sequence from clone CH211-266N15, complete sequence Length = 182813 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ttacatgtacatttaaaatgt 22 ||||||||||||||||||||| Sbjct: 6421 ttacatgtacatttaaaatgt 6401
>emb|BX296566.5| Zebrafish DNA sequence from clone CH211-196F4 in linkage group 11, complete sequence Length = 128109 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 taaaatgtttaacattaataa 35 ||||||||||||||||||||| Sbjct: 90447 taaaatgtttaacattaataa 90467
>emb|BX004786.8| Zebrafish DNA sequence from clone DKEY-1P6 in linkage group 24, complete sequence Length = 178232 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atgtacatttaaaatgtttaa 26 ||||||||||||||||||||| Sbjct: 143982 atgtacatttaaaatgtttaa 143962
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 tccttctccagctgctccttg 306 ||||||||||||||||||||| Sbjct: 843264 tccttctccagctgctccttg 843244
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 tccttctccagctgctcctt 305 |||||||||||||||||||| Sbjct: 554200 tccttctccagctgctcctt 554181
>gb|AC110880.10| Mus musculus chromosome 7, clone RP24-456G3, complete sequence Length = 162685 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 tgtacatttaaaatgtttaacatt 30 |||| ||||||||||||||||||| Sbjct: 143859 tgtaaatttaaaatgtttaacatt 143882
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 ctccagctgctccttgatcc 310 |||||||||||||||||||| Sbjct: 2729798 ctccagctgctccttgatcc 2729817
>gb|AC119971.8| Mus musculus chromosome 16, clone RP24-480D8, complete sequence Length = 166093 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tacatttaaaatgtttaaca 28 |||||||||||||||||||| Sbjct: 154802 tacatttaaaatgtttaaca 154783
>gb|AY292762.1| Pronolagus saundersiae MGF gene, partial intron sequence Length = 678 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 tgacaactgacaaacaactg 155 |||||||||||||||||||| Sbjct: 449 tgacaactgacaaacaactg 468
>gb|BC056813.1| Danio rerio transcription elongation regulator 1 (CA150), mRNA (cDNA clone MGC:63740 IMAGE:2639923), complete cds Length = 3833 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 gatgagtgtgttgtcagagt 394 |||||||||||||||||||| Sbjct: 3176 gatgagtgtgttgtcagagt 3195
>ref|NM_153346.2| Homo sapiens chromosome X open reading frame 20 (CXorf20), mRNA Length = 4700 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 catttaaaatgtttaacatt 30 |||||||||||||||||||| Sbjct: 4519 catttaaaatgtttaacatt 4500
>emb|CR388416.6| Zebrafish DNA sequence from clone DKEY-165B20 in linkage group 14, complete sequence Length = 207245 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atgtacatttaaaatgttta 25 |||||||||||||||||||| Sbjct: 59820 atgtacatttaaaatgttta 59839
>gb|AY231957.1| Drosophila yakuba clone yak-em_Tm2 mRNA sequence Length = 638 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ccttctccagctgctccttg 306 |||||||||||||||||||| Sbjct: 106 ccttctccagctgctccttg 87
>emb|CR696040.2|CNS0G00K Tetraodon nigroviridis full-length cDNA Length = 1345 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 tccttctccagctgctcctt 305 |||||||||||||||||||| Sbjct: 296 tccttctccagctgctcctt 277
>gb|AC073068.8| Homo sapiens BAC clone RP11-159I18 from 7, complete sequence Length = 171058 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tcccgtttacaacagcacaaaaag 83 |||| ||||||||||||||||||| Sbjct: 92025 tcccatttacaacagcacaaaaag 92048
>gb|AC108423.10| Mus musculus chromosome 16, clone RP23-443N12, complete sequence Length = 192819 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tacatttaaaatgtttaaca 28 |||||||||||||||||||| Sbjct: 82929 tacatttaaaatgtttaaca 82910
>gb|AC152067.21| Medicago truncatula clone mth2-22g24, complete sequence Length = 86972 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 acaaaaagctacaaatctca 95 |||||||||||||||||||| Sbjct: 17085 acaaaaagctacaaatctca 17066
>emb|AL355333.18| Human DNA sequence from clone RP11-575N15 on chromosome 10, complete sequence Length = 180545 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 catcctcttgcgccaagcag 55 |||||||||||||||||||| Sbjct: 163581 catcctcttgcgccaagcag 163600
>emb|AL049597.29|HSJ612B15 Human DNA sequence from clone RP4-612B15 on chromosome 1p22.2-31.1 Contains the 3' end of a novel gene, the SH3GLB1 gene for SH3-domain GRB2-like endophilin B1, a ribosomal protein L17 (RPL17) pseudogene and a CpG island, complete sequence Length = 127820 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 108 aagttcagactgaatcaagtaaatggtg 135 |||||||||||||| | ||||||||||| Sbjct: 121457 aagttcagactgaagctagtaaatggtg 121430
>emb|AL096763.14|HSJ1129A6 Human DNA sequence from clone RP5-1129A6 on chromosome Xp22.11-22.2 Contains the 3'end of the SCML2 gene for sex comb on midleg-like 2 (Drosophila), a novel protein (MGC33653) and one CpG island, complete sequence Length = 109018 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 catttaaaatgtttaacatt 30 |||||||||||||||||||| Sbjct: 1852 catttaaaatgtttaacatt 1871
>emb|AL034395.6|HS243L18 Human DNA sequence from clone RP1-243L18 on chromosome 1p36.11-36.23 Contains the 5' end of a novel gene (KIAA1026) and a CpG island, complete sequence Length = 110654 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ttccttctccagctgctcct 304 |||||||||||||||||||| Sbjct: 17316 ttccttctccagctgctcct 17335
>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4 Length = 293050 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 aagttcagactgaatcaagt 127 |||||||||||||||||||| Sbjct: 176965 aagttcagactgaatcaagt 176984
>gb|BC037301.2| Homo sapiens chromosome X open reading frame 20, mRNA (cDNA clone MGC:33653 IMAGE:4827886), complete cds Length = 4700 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 catttaaaatgtttaacatt 30 |||||||||||||||||||| Sbjct: 4519 catttaaaatgtttaacatt 4500
>emb|CR407555.9| Zebrafish DNA sequence from clone DKEY-260H8 in linkage group 5, complete sequence Length = 156095 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 tgacaactgacaaacaactg 155 |||||||||||||||||||| Sbjct: 11748 tgacaactgacaaacaactg 11767
>emb|BX571813.8| Zebrafish DNA sequence from clone DKEY-14O6 in linkage group 3, complete sequence Length = 233901 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atgtacatttaaaatgttta 25 |||||||||||||||||||| Sbjct: 204393 atgtacatttaaaatgttta 204374
>dbj|AB248956.1| Canis familiaris TLR7 mRNA for Toll-like receptor 7 protein, complete cds Length = 4244 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 cagccaagcttctccttgatgagt 381 |||||||||||||||||| ||||| Sbjct: 3293 cagccaagcttctccttggtgagt 3270
>emb|BX569781.7| Zebrafish DNA sequence from clone DKEY-72L18 in linkage group 17, complete sequence Length = 170138 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tgtgacaactgacaaacaac 153 |||||||||||||||||||| Sbjct: 10326 tgtgacaactgacaaacaac 10345
>ref|NM_169645.2| Drosophila melanogaster Tropomyosin 2 CG4843-RC, transcript variant C (Tm2), mRNA Length = 1015 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ccttctccagctgctccttg 306 |||||||||||||||||||| Sbjct: 359 ccttctccagctgctccttg 340
>ref|NM_169644.1| Drosophila melanogaster Tropomyosin 2 CG4843-RB, transcript variant B (Tm2), mRNA Length = 1514 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ccttctccagctgctccttg 306 |||||||||||||||||||| Sbjct: 356 ccttctccagctgctccttg 337
>ref|NM_079637.4| Drosophila melanogaster Tropomyosin 2 CG4843-RA, transcript variant A (Tm2), mRNA Length = 1517 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ccttctccagctgctccttg 306 |||||||||||||||||||| Sbjct: 359 ccttctccagctgctccttg 340
>gb|AY071087.1| Drosophila melanogaster RE15528 full length cDNA Length = 1244 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ccttctccagctgctccttg 306 |||||||||||||||||||| Sbjct: 359 ccttctccagctgctccttg 340
>ref|XM_696925.1| PREDICTED: Danio rerio hypothetical protein LOC554766 (LOC554766), mRNA Length = 3807 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 gatgagtgtgttgtcagagt 394 |||||||||||||||||||| Sbjct: 3167 gatgagtgtgttgtcagagt 3186
>gb|AC007648.6|AC007648 Drosophila melanogaster, chromosome 3R, region 88E-88F, BAC clone BACR13A02, complete sequence Length = 166141 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ccttctccagctgctccttg 306 |||||||||||||||||||| Sbjct: 71708 ccttctccagctgctccttg 71689
>ref|NM_198357.1| Danio rerio transcription elongation regulator 1 (CA150) (tcerg1), mRNA Length = 3833 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 gatgagtgtgttgtcagagt 394 |||||||||||||||||||| Sbjct: 3176 gatgagtgtgttgtcagagt 3195
>emb|BX649341.3| Zebrafish DNA sequence from clone DKEY-199K11 in linkage group 22, complete sequence Length = 148057 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atgtacatttaaaatgttta 25 |||||||||||||||||||| Sbjct: 125837 atgtacatttaaaatgttta 125856
>emb|BX649570.7| Zebrafish DNA sequence from clone CH211-13L22 in linkage group 21, complete sequence Length = 157398 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tttaaaatgtttaacattaa 32 |||||||||||||||||||| Sbjct: 61827 tttaaaatgtttaacattaa 61846
>dbj|BS000112.1| Pan troglodytes chromosome 22 clone:RP43-076J24, map 22, complete sequences Length = 169786 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 taaaatgtttaacattaata 34 |||||||||||||||||||| Sbjct: 36322 taaaatgtttaacattaata 36341
>emb|BX004995.15| Zebrafish DNA sequence from clone CH211-179G4 in linkage group 20, complete sequence Length = 156160 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tttaaaatgtttaacattaa 32 |||||||||||||||||||| Sbjct: 135879 tttaaaatgtttaacattaa 135860
>emb|BX088547.12| Zebrafish DNA sequence from clone DKEY-238O14, complete sequence Length = 256446 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atgtacatttaaaatgttta 25 |||||||||||||||||||| Sbjct: 163596 atgtacatttaaaatgttta 163615
>dbj|AB012248.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXI22 Length = 80115 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 tttacatgtacatttaaaatgttt 24 ||||||||||||||||||| |||| Sbjct: 32884 tttacatgtacatttaaaaagttt 32907
>gb|AC005040.2|AC005040 Homo sapiens BAC clone RP11-519H15 from 2, complete sequence Length = 189949 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 cctcagcccatccttcagcc 343 |||||||||||||||||||| Sbjct: 140533 cctcagcccatccttcagcc 140514
>emb|CT025748.16| Zebrafish DNA sequence from clone CH73-166N24 in linkage group 5, complete sequence Length = 117231 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atgtacatttaaaatgttta 25 |||||||||||||||||||| Sbjct: 5596 atgtacatttaaaatgttta 5615
>emb|CR354430.16| Zebrafish DNA sequence from clone CH211-218P2 in linkage group 25, complete sequence Length = 197231 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tacatttaaaatgtttaaca 28 |||||||||||||||||||| Sbjct: 16111 tacatttaaaatgtttaaca 16130
>gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46 of 118 of the complete sequence Length = 236375 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ccttctccagctgctccttg 306 |||||||||||||||||||| Sbjct: 116140 ccttctccagctgctccttg 116121
>emb|AL845528.4| Mouse DNA sequence from clone RP23-25P15 on chromosome 2, complete sequence Length = 196976 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tacatgtacatttaaaatgt 22 |||||||||||||||||||| Sbjct: 74240 tacatgtacatttaaaatgt 74221
>gb|K03277.1|DROTROPI2 D. melanogaster tropomyosin I gene, exons 2-5, complete cds Length = 3599 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ccttctccagctgctccttg 306 |||||||||||||||||||| Sbjct: 808 ccttctccagctgctccttg 789
>gb|K02622.1|DROTRO14 D.melanogaster gene for tropomyosin isoforms 127 and 129, exons 1 and 2 Length = 893 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ccttctccagctgctccttg 306 |||||||||||||||||||| Sbjct: 210 ccttctccagctgctccttg 191 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,012,257 Number of Sequences: 3902068 Number of extensions: 5012257 Number of successful extensions: 115769 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115364 Number of HSP's gapped (non-prelim): 394 length of query: 558 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 535 effective length of database: 17,143,297,704 effective search space: 9171664271640 effective search space used: 9171664271640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
