| Clone Name | rbags6n18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY325266.1| Hordeum vulgare cytosolic heat shock protein 90 (HSP90) mRNA, complete cds Length = 2553 Score = 200 bits (101), Expect = 7e-49 Identities = 124/133 (93%), Gaps = 2/133 (1%) Strand = Plus / Minus Query: 1 aactagacggtgcagggcatggacatacgacgacgcgcagccttggcgcttagtcgacct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2219 aactagacggtgcagggcatggacatacgacgacgcgcagccttggcgcttagtcgacct 2160 Query: 61 cctccatcttgctctcaccggcatcatcctccaggggcgnnnnnnnnnggtgtcgttctc 120 ||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2159 cctccatcttgctctcaccggcatcatcctccaggggcg--gcatgtcggtgtcgttctc 2102 Query: 121 aggcgcctcatcg 133 ||||||||||||| Sbjct: 2101 aggcgcctcatcg 2089
>emb|X98582.1|TAX98582 T.aestivum mRNA for HSP80-2 protein Length = 2378 Score = 129 bits (65), Expect = 2e-27 Identities = 115/133 (86%), Gaps = 2/133 (1%) Strand = Plus / Minus Query: 1 aactagacggtgcagggcatggacatacgacgacgcgcagccttggcgcttagtcgacct 60 |||||| |||||||||||||| |||| ||||||| |||| ||||||||||||||||||| Sbjct: 2231 aactaggcggtgcagggcatgaacatccgacgacaggcagacttggcgcttagtcgacct 2172 Query: 61 cctccatcttgctctcaccggcatcatcctccaggggcgnnnnnnnnnggtgtcgttctc 120 ||||||||||||||||||| || || ||||||||||||| |||||||||||| Sbjct: 2171 cctccatcttgctctcaccagcgtcgtcctccaggggcg--gcatgtcggtgtcgttctc 2114 Query: 121 aggcgcctcatcg 133 ||||||||||||| Sbjct: 2113 aggcgcctcatcg 2101
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 79.8 bits (40), Expect = 2e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 44 tggcgcttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 ||||||||||||||||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 18460303 tggcgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 18460358 Score = 67.9 bits (34), Expect = 7e-09 Identities = 46/50 (92%) Strand = Plus / Plus Query: 50 ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 ||||||||||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 18482614 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 18482663 Score = 67.9 bits (34), Expect = 7e-09 Identities = 46/50 (92%) Strand = Plus / Plus Query: 50 ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 ||||||||||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 18471155 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 18471204
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 79.8 bits (40), Expect = 2e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 44 tggcgcttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 ||||||||||||||||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 122177 tggcgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 122232 Score = 67.9 bits (34), Expect = 7e-09 Identities = 46/50 (92%) Strand = Plus / Plus Query: 50 ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 ||||||||||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 144488 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 144537 Score = 67.9 bits (34), Expect = 7e-09 Identities = 46/50 (92%) Strand = Plus / Plus Query: 50 ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 ||||||||||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 133029 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 133078
>dbj|AB111810.1| Oryza sativa (japonica cultivar-group) Hsp90 mRNA for heat shock protein 90, complete cds Length = 2408 Score = 79.8 bits (40), Expect = 2e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 44 tggcgcttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 ||||||||||||||||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 2211 tggcgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 2156
>emb|Z15018.1|OSHSP82G O.sativa hsp82 gene for heat shock protein 82 Length = 704 Score = 79.8 bits (40), Expect = 2e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 44 tggcgcttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 ||||||||||||||||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 271 tggcgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 216
>dbj|AK064780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B06, full insert sequence Length = 2410 Score = 79.8 bits (40), Expect = 2e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 44 tggcgcttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 ||||||||||||||||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 2232 tggcgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 2177
>gb|BT016606.1| Zea mays clone Contig439 mRNA sequence Length = 867 Score = 69.9 bits (35), Expect = 2e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 48 gcttagtcgacctcctccatcttgctctcaccggcatcatcctccag 94 ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 536 gcttagtcgacctcctccatcttgctctcgccagcgtcatcctccag 490
>gb|BT024184.1| Zea mays clone EL01N0315D01 mRNA sequence Length = 1740 Score = 69.9 bits (35), Expect = 2e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 48 gcttagtcgacctcctccatcttgctctcaccggcatcatcctccag 94 ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 1480 gcttagtcgacctcctccatcttgctctcgccagcgtcatcctccag 1434
>gb|AY110769.1| Zea mays CL1264_4 mRNA sequence Length = 864 Score = 69.9 bits (35), Expect = 2e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 48 gcttagtcgacctcctccatcttgctctcaccggcatcatcctccag 94 ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 534 gcttagtcgacctcctccatcttgctctcgccagcgtcatcctccag 488
>gb|AY105939.1| Zea mays PCO150588 mRNA sequence Length = 1101 Score = 69.9 bits (35), Expect = 2e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 48 gcttagtcgacctcctccatcttgctctcaccggcatcatcctccag 94 |||||||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 896 gcttagtcgacctcctccatcttgctttcgccggcgtcatcctccag 850
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 67.9 bits (34), Expect = 7e-09 Identities = 46/50 (92%) Strand = Plus / Plus Query: 50 ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 ||||||||||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 10620 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 10669
>dbj|AK061896.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G11, full insert sequence Length = 2440 Score = 67.9 bits (34), Expect = 7e-09 Identities = 46/50 (92%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 ||||||||||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 2224 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 2175
>dbj|D29709.1|RICYK21 Oryza sativa mRNA, partial homologous to heat shock protein 82 gene Length = 371 Score = 67.9 bits (34), Expect = 7e-09 Identities = 46/50 (92%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 ||||||||||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 198 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 149
>dbj|AK121906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105K15, full insert sequence Length = 1278 Score = 67.9 bits (34), Expect = 7e-09 Identities = 46/50 (92%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 ||||||||||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 1064 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 1015
>dbj|AK119663.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-B04, full insert sequence Length = 1538 Score = 67.9 bits (34), Expect = 7e-09 Identities = 46/50 (92%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 ||||||||||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 1355 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 1306
>emb|Z11920.1|OSHSP82A O.sativa gene for heat shock protein 82 HSP82 Length = 5310 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 47 cgcttagtcgacctcctccatcttgctctcaccggcatcatcctc 91 |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 4934 cgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctc 4890
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 47 cgcttagtcgacctcctccatcttgctctcaccggcatcatcctc 91 |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 24712197 cgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctc 24712241
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 47 cgcttagtcgacctcctccatcttgctctcaccggcatcatcctc 91 |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 12998 cgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctc 13042
>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A06 Length = 92836 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 47 cgcttagtcgacctcctccatcttgctctcaccggcatcatcctc 91 |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 84501 cgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctc 84545
>dbj|AK102426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093F17, full insert sequence Length = 3149 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 47 cgcttagtcgacctcctccatcttgctctcaccggcatcatcctc 91 |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 2912 cgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctc 2868
>gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRNA, complete cds Length = 2397 Score = 65.9 bits (33), Expect = 3e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 51 tagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 |||||||||||||||||||||||||| ||||| || |||||||| |||| Sbjct: 2211 tagtcgacctcctccatcttgctctcgccggcgtcctcctccagcggcg 2163
>gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence Length = 2179 Score = 63.9 bits (32), Expect = 1e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 51 tagtcgacctcctccatcttgctctcaccggcatcatcctccag 94 |||||||||||||||||||||||||| || || ||||||||||| Sbjct: 2033 tagtcgacctcctccatcttgctctcgccagcgtcatcctccag 1990
>gb|AY109427.1| Zea mays CL1264_2 mRNA sequence Length = 1267 Score = 63.9 bits (32), Expect = 1e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 51 tagtcgacctcctccatcttgctctcaccggcatcatcctccag 94 |||||||||||||||||||||||||| || || ||||||||||| Sbjct: 1016 tagtcgacctcctccatcttgctctcgccagcgtcatcctccag 973
>dbj|D21284.1|RICAD167 Oryza sativa AD167 mRNA for heat shock protein 82, partial sequence Length = 474 Score = 61.9 bits (31), Expect = 4e-07 Identities = 45/50 (90%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99 ||||||||||||||||||||||||||| |||| || |||||||| |||| Sbjct: 270 ttagtcgacctcctccatcttgctctcgncggcgtcgtcctccagcggcg 221
>ref|XM_483191.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2100 Score = 60.0 bits (30), Expect = 2e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgctctcaccggcatcatcctc 91 ||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 2100 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctc 2059
>gb|AY103538.1| Zea mays PCO150589 mRNA sequence Length = 2534 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttgctctcacc 79 ||||||||||||||||||||||||| ||||| Sbjct: 2280 cttagtcgacctcctccatcttgctttcacc 2250
>emb|X67711.2|OSHSC70A O.sativa hsp70 gene for heat shock protein 70 Length = 4791 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Minus Query: 43 ttggcgcttagtcgacctcctccatcttg 71 |||||||||||||||||||||| |||||| Sbjct: 4581 ttggcgcttagtcgacctcctcgatcttg 4553
>gb|S59780.1|S59780 Zea mays heat shock protein HSP82 (hsp82) gene, complete cds Length = 3468 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 52 agtcgacctcctccatcttgctctc 76 ||||||||||||||||||||||||| Sbjct: 2970 agtcgacctcctccatcttgctctc 2946
>emb|Z15024.1|OSHSP82MR O.sativa (Taichung Native One) hsp82 mRNA for heat shock protein 82 Length = 368 Score = 50.1 bits (25), Expect = 0.002 Identities = 40/45 (88%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgctctcaccggcatcatcctccag 94 ||||||||||||||||||||| |||| ||||| || |||||||| Sbjct: 220 ttagtcgacctcctccatcttcgtctcgccggcgtcgtcctccag 176
>ref|NM_124642.2| Arabidopsis thaliana HSP81-1 (HEAT SHOCK PROTEIN 81-1); ATP binding / unfolded protein binding AT5G52640 (HSP81-1) mRNA, complete cds Length = 2440 Score = 48.1 bits (24), Expect = 0.007 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttgctctc 76 |||||||||| ||||||||||||||||| Sbjct: 2227 cttagtcgacttcctccatcttgctctc 2200
>emb|Y07613.1|ATHSP90A A.thaliana hsp90A gene Length = 3413 Score = 48.1 bits (24), Expect = 0.007 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttgctctc 76 |||||||||| ||||||||||||||||| Sbjct: 3216 cttagtcgacttcctccatcttgctctc 3189
>gb|AY128296.1| Arabidopsis thaliana AT5g52640/F6N7_13 mRNA, complete cds Length = 2441 Score = 48.1 bits (24), Expect = 0.007 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttgctctc 76 |||||||||| ||||||||||||||||| Sbjct: 2227 cttagtcgacttcctccatcttgctctc 2200
>dbj|AB025606.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F6N7 Length = 74282 Score = 48.1 bits (24), Expect = 0.007 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttgctctc 76 |||||||||| ||||||||||||||||| Sbjct: 34486 cttagtcgacttcctccatcttgctctc 34459
>dbj|D00710.1|ATHHSP81 Arabidopsis thaliana HSP81-1 gene for 81kDa heat-shock protein, complete cds Length = 3213 Score = 48.1 bits (24), Expect = 0.007 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttgctctc 76 |||||||||| ||||||||||||||||| Sbjct: 3056 cttagtcgacttcctccatcttgctctc 3029
>gb|M62984.1|ATHHSP83 A.thaliana heat shock protein 83 mRNA, complete cds Length = 2390 Score = 48.1 bits (24), Expect = 0.007 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttgctctc 76 |||||||||| ||||||||||||||||| Sbjct: 2188 cttagtcgacttcctccatcttgctctc 2161
>gb|AY344115.1| Toxoplasma gondii heat shock protein 90 mRNA, complete cds Length = 2933 Score = 46.1 bits (23), Expect = 0.026 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 gcttagtcgacctcctccatctt 70 ||||||||||||||||||||||| Sbjct: 2261 gcttagtcgacctcctccatctt 2239
>gb|AY292370.1| Toxoplasma gondii HSP90 mRNA, complete cds Length = 2966 Score = 46.1 bits (23), Expect = 0.026 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 gcttagtcgacctcctccatctt 70 ||||||||||||||||||||||| Sbjct: 2279 gcttagtcgacctcctccatctt 2257
>gb|BT001091.1| Arabidopsis thaliana At5g52640/F6N7_13 mRNA, complete cds Length = 2118 Score = 46.1 bits (23), Expect = 0.026 Identities = 26/27 (96%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgctctc 76 ||||||||| ||||||||||||||||| Sbjct: 2118 ttagtcgacttcctccatcttgctctc 2092
>gb|AF521007.1| Hevea brasiliensis heat shock protein mRNA, complete cds Length = 2405 Score = 46.1 bits (23), Expect = 0.026 Identities = 26/27 (96%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgctctc 76 ||||||||| ||||||||||||||||| Sbjct: 2217 ttagtcgacttcctccatcttgctctc 2191
>gb|AF421541.1| Crypthecodinium cohnii Hsp90 mRNA, complete cds Length = 2540 Score = 46.1 bits (23), Expect = 0.026 Identities = 23/23 (100%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttg 71 ||||||||||||||||||||||| Sbjct: 2196 cttagtcgacctcctccatcttg 2174
>gb|AF042329.1|AF042329 Eimeria tenella heat shock protein 90 (hsp90) mRNA, complete cds Length = 2505 Score = 46.1 bits (23), Expect = 0.026 Identities = 23/23 (100%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttg 71 ||||||||||||||||||||||| Sbjct: 2253 cttagtcgacctcctccatcttg 2231
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 44.1 bits (22), Expect = 0.10 Identities = 25/26 (96%) Strand = Plus / Minus Query: 46 gcgcttagtcgacctcctccatcttg 71 ||||||||||||||||||| |||||| Sbjct: 135642 gcgcttagtcgacctcctcgatcttg 135617
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.10 Identities = 25/26 (96%) Strand = Plus / Minus Query: 46 gcgcttagtcgacctcctccatcttg 71 ||||||||||||||||||| |||||| Sbjct: 28177087 gcgcttagtcgacctcctcgatcttg 28177062
>dbj|AK119710.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-E11, full insert sequence Length = 529 Score = 44.1 bits (22), Expect = 0.10 Identities = 25/26 (96%) Strand = Plus / Minus Query: 46 gcgcttagtcgacctcctccatcttg 71 ||||||||||||||||||| |||||| Sbjct: 318 gcgcttagtcgacctcctcgatcttg 293
>dbj|AK119255.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-H02, full insert sequence Length = 2311 Score = 44.1 bits (22), Expect = 0.10 Identities = 25/26 (96%) Strand = Plus / Minus Query: 46 gcgcttagtcgacctcctccatcttg 71 ||||||||||||||||||| |||||| Sbjct: 2128 gcgcttagtcgacctcctcgatcttg 2103
>dbj|AK065431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021C17, full insert sequence Length = 2380 Score = 44.1 bits (22), Expect = 0.10 Identities = 25/26 (96%) Strand = Plus / Minus Query: 46 gcgcttagtcgacctcctccatcttg 71 ||||||||||||||||||| |||||| Sbjct: 2026 gcgcttagtcgacctcctcgatcttg 2001
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.10 Identities = 25/26 (96%) Strand = Plus / Minus Query: 46 gcgcttagtcgacctcctccatcttg 71 ||||||||||||||||||| |||||| Sbjct: 28161965 gcgcttagtcgacctcctcgatcttg 28161940
>ref|XM_470993.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2112 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 agtcgacctcctccatcttgctctc 76 |||| |||||||||||||||||||| Sbjct: 2110 agtccacctcctccatcttgctctc 2086
>gb|AY519499.1| Nicotiana tabacum heat shock protein 90 (OINtHsp90) mRNA, complete cds Length = 2306 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttgct 73 ||||||| ||||||||||||||||| Sbjct: 2141 cttagtcaacctcctccatcttgct 2117
>gb|AY310789.1| Nicotiana benthamiana clone 10-186 unknown mRNA Length = 2317 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttgct 73 ||||||| ||||||||||||||||| Sbjct: 2146 cttagtcaacctcctccatcttgct 2122
>gb|DQ059998.1| Volvox carteri f. nagariensis heat-shock inducible Hsp70 (hsp70A) gene, complete cds Length = 6449 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 cgcttagtcgacctcctccatcttg 71 |||||||||||||||||| |||||| Sbjct: 5697 cgcttagtcgacctcctcgatcttg 5673
>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06, complete sequence Length = 143730 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 agtcgacctcctccatcttgctctc 76 |||| |||||||||||||||||||| Sbjct: 7230 agtccacctcctccatcttgctctc 7206
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 agtcgacctcctccatcttgctctc 76 |||| |||||||||||||||||||| Sbjct: 476262 agtccacctcctccatcttgctctc 476238
>dbj|AK110745.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-F12, full insert sequence Length = 2441 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 cgcttagtcgacctcctccat 67 ||||||||||||||||||||| Sbjct: 2237 cgcttagtcgacctcctccat 2217
>dbj|AK105370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-C06, full insert sequence Length = 375 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 agtcgacctcctccatcttgctctc 76 |||| |||||||||||||||||||| Sbjct: 120 agtccacctcctccatcttgctctc 96
>dbj|AK063751.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-G12, full insert sequence Length = 530 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 agtcgacctcctccatcttgctctc 76 |||| |||||||||||||||||||| Sbjct: 307 agtccacctcctccatcttgctctc 283
>dbj|AK063698.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-G05, full insert sequence Length = 520 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 agtcgacctcctccatcttgctctc 76 |||| |||||||||||||||||||| Sbjct: 285 agtccacctcctccatcttgctctc 261
>dbj|AK063629.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-F05, full insert sequence Length = 561 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 agtcgacctcctccatcttgctctc 76 |||| |||||||||||||||||||| Sbjct: 306 agtccacctcctccatcttgctctc 282
>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13, complete sequence Length = 130249 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 agtcgacctcctccatcttgctctc 76 |||| |||||||||||||||||||| Sbjct: 115014 agtccacctcctccatcttgctctc 114990
>ref|NM_124985.3| Arabidopsis thaliana HSP81-2; ATP binding / unfolded protein binding AT5G56030 (HSP81-2) mRNA, complete cds Length = 2408 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgct 73 ||||||||| |||||||||||||| Sbjct: 2191 ttagtcgacttcctccatcttgct 2168
>ref|NM_124982.2| Arabidopsis thaliana ATP binding / unfolded protein binding AT5G56000 mRNA, complete cds Length = 2336 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgct 73 ||||||||| |||||||||||||| Sbjct: 2185 ttagtcgacttcctccatcttgct 2162
>gb|AY456093.1| Phytophthora nicotianae heat shock protein 70 (Hsp70a) gene, complete cds Length = 4220 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 gcttagtcgacctcctccatcttg 71 ||||||||||||||||| |||||| Sbjct: 412 gcttagtcgacctcctcaatcttg 435
>gb|BT000717.1| Arabidopsis thaliana clone RAFL09-76-I24 (R19621) putative heat shock protein 81-2 (HSP81-2) (At5g56030) mRNA, complete cds Length = 2384 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgct 73 ||||||||| |||||||||||||| Sbjct: 2189 ttagtcgacttcctccatcttgct 2166
>gb|BC008189.1| Mus musculus, clone IMAGE:3584589, mRNA, partial cds Length = 1728 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 gcttagtcgacctcctccatcttg 71 ||||||||||| |||||||||||| Sbjct: 1478 gcttagtcgacttcctccatcttg 1455
>emb|Y11828.1|ATHSP814 A.thaliana hsp81.4 gene Length = 2507 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgct 73 ||||||||| |||||||||||||| Sbjct: 2489 ttagtcgacttcctccatcttgct 2466
>gb|AY257488.1| Lycopersicon esculentum HSC2-like mRNA, partial sequence Length = 804 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 gcttagtcgacctcctccatcttg 71 ||||||||||||||||| |||||| Sbjct: 613 gcttagtcgacctcctcgatcttg 590
>emb|AL110469.1|SPAC926 S.pombe chromosome I cosmid c926 Length = 23193 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 tcgacctcctccatcttgctctca 77 ||||| |||||||||||||||||| Sbjct: 4861 tcgacttcctccatcttgctctca 4884
>gb|AY128805.1| Arabidopsis thaliana heat shock protein 81-2 (At5g56030) mRNA, complete cds Length = 2261 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgct 73 ||||||||| |||||||||||||| Sbjct: 2100 ttagtcgacttcctccatcttgct 2077
>gb|AY062750.1| Arabidopsis thaliana HEAT SHOCK PROTEIN 81-2 (HSP81-2) (MDA7.7) mRNA, complete cds Length = 2382 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgct 73 ||||||||| |||||||||||||| Sbjct: 2186 ttagtcgacttcctccatcttgct 2163
>gb|S77849.1| HSP81-3=heat-shock Protein [Arabidopsis thaliana=thale-cress, Genomic, 3094 nt] Length = 3094 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgct 73 ||||||||| |||||||||||||| Sbjct: 2833 ttagtcgacttcctccatcttgct 2810
>ref|NM_001019786.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC926.04c), partial mRNA Length = 2115 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 tcgacctcctccatcttgctctca 77 ||||| |||||||||||||||||| Sbjct: 2111 tcgacttcctccatcttgctctca 2088
>gb|BT002535.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 2302 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgct 73 ||||||||| |||||||||||||| Sbjct: 2189 ttagtcgacttcctccatcttgct 2166
>dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDA7 Length = 82033 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgct 73 ||||||||| |||||||||||||| Sbjct: 23753 ttagtcgacttcctccatcttgct 23730 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 ttagtcgacctcctccatcttgct 73 ||||||||| |||||||||||||| Sbjct: 11922 ttagtcgacttcctccatcttgct 11945
>dbj|AK110411.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-H01, full insert sequence Length = 2819 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gcttagtcgacctcctccat 67 |||||||||||||||||||| Sbjct: 2200 gcttagtcgacctcctccat 2181
>gb|BT001944.1| Arabidopsis thaliana clone C105057 putative heat-shock protein HSP81-2 (At5g56030) mRNA, complete cds Length = 2131 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 ttagtcgacctcctccatcttgct 73 ||||||||| |||||||||||||| Sbjct: 2100 ttagtcgacttcctccatcttgct 2077
>gb|AY610240.1| Sus scrofa clone rdbla0126_h3.y1.abd, mRNA sequence Length = 561 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ggcatcatcctccaggggcg 99 |||||||||||||||||||| Sbjct: 251 ggcatcatcctccaggggcg 232
>gb|L35550.1|YSPHSP90X Schizosaccharomyces pombe heat shock protein 90 (Hsp90) gene, complete cds Length = 2535 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 tcgacctcctccatcttgctctca 77 ||||| |||||||||||||||||| Sbjct: 2516 tcgacttcctccatcttgctctca 2493
>gb|AY830127.1| Medicago sativa heat shock protein 70 (HSP70-1) mRNA, complete cds Length = 2302 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttg 71 |||||||||||||||| |||||| Sbjct: 2055 cttagtcgacctcctcaatcttg 2033
>gb|AY372071.1| Nicotiana tabacum heat shock protein 70-3 (HSP70-3) gene, complete cds Length = 3208 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttg 71 |||||||||||||||| |||||| Sbjct: 3012 cttagtcgacctcctcaatcttg 2990
>gb|AC146757.19| Medicago truncatula clone mth2-16n21, complete sequence Length = 135915 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 49 cttagtcgacctcctccatcttg 71 |||||||||||||||| |||||| Sbjct: 118328 cttagtcgacctcctcaatcttg 118350
>gb|AC147536.12| Medicago truncatula clone mth2-9l3, complete sequence Length = 111486 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 49 cttagtcgacctcctccatcttg 71 |||||||||||||||| |||||| Sbjct: 93896 cttagtcgacctcctcaatcttg 93918
>gb|AY253326.1| Nicotiana tabacum heat shock protein 70 (Hsp70) mRNA, complete cds Length = 2259 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttg 71 |||||||||||||||| |||||| Sbjct: 2050 cttagtcgacctcctcaatcttg 2028
>gb|AF479058.1| Sandersonia aurantiaca 70 kDa heat shock protein mRNA, complete cds Length = 1241 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttg 71 |||||||||||||||| |||||| Sbjct: 1077 cttagtcgacctcctcaatcttg 1055
>emb|Z30176.1|TRMHSP70 T.repens (Huia) mRNA for heat shock protein 70 Length = 554 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttg 71 |||||||||||||||| |||||| Sbjct: 398 cttagtcgacctcctcaatcttg 376
>gb|U41653.1|SBU41653 Sorghum bicolor heat shock protein 70 (hsp70) pseudogene Length = 3305 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 49 cttagtcgacctcctccatcttg 71 |||||||||||||||| |||||| Sbjct: 3123 cttagtcgacctcctcaatcttg 3101 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 697,864 Number of Sequences: 3902068 Number of extensions: 697864 Number of successful extensions: 44821 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44593 Number of HSP's gapped (non-prelim): 228 length of query: 133 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 112 effective length of database: 17,151,101,840 effective search space: 1920923406080 effective search space used: 1920923406080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)