ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6n18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY325266.1| Hordeum vulgare cytosolic heat shock protein 90 (... 200 7e-49
2emb|X98582.1|TAX98582 T.aestivum mRNA for HSP80-2 protein 129 2e-27
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 80 2e-12
4dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic D... 80 2e-12
5dbj|AB111810.1| Oryza sativa (japonica cultivar-group) Hsp90 mRN... 80 2e-12
6emb|Z15018.1|OSHSP82G O.sativa hsp82 gene for heat shock protein 82 80 2e-12
7dbj|AK064780.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 2e-12
8gb|BT016606.1| Zea mays clone Contig439 mRNA sequence 70 2e-09
9gb|BT024184.1| Zea mays clone EL01N0315D01 mRNA sequence 70 2e-09
10gb|AY110769.1| Zea mays CL1264_4 mRNA sequence 70 2e-09
11gb|AY105939.1| Zea mays PCO150588 mRNA sequence 70 2e-09
12gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome... 68 7e-09
13dbj|AK061896.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 7e-09
14dbj|D29709.1|RICYK21 Oryza sativa mRNA, partial homologous to he... 68 7e-09
15dbj|AK121906.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 7e-09
16dbj|AK119663.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 7e-09
17emb|Z11920.1|OSHSP82A O.sativa gene for heat shock protein 82 HSP82 66 3e-08
18dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 66 3e-08
19dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic D... 66 3e-08
20dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic D... 66 3e-08
21dbj|AK102426.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 3e-08
22gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRN... 66 3e-08
23gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence 64 1e-07
24gb|AY109427.1| Zea mays CL1264_2 mRNA sequence 64 1e-07
25dbj|D21284.1|RICAD167 Oryza sativa AD167 mRNA for heat shock pro... 62 4e-07
26ref|XM_483191.1| Oryza sativa (japonica cultivar-group), mRNA 60 2e-06
27gb|AY103538.1| Zea mays PCO150589 mRNA sequence 54 1e-04
28emb|X67711.2|OSHSC70A O.sativa hsp70 gene for heat shock protein 70 50 0.002
29gb|S59780.1|S59780 Zea mays heat shock protein HSP82 (hsp82) gen... 50 0.002
30emb|Z15024.1|OSHSP82MR O.sativa (Taichung Native One) hsp82 mRNA... 50 0.002
31ref|NM_124642.2| Arabidopsis thaliana HSP81-1 (HEAT SHOCK PROTEI... 48 0.007
32emb|Y07613.1|ATHSP90A A.thaliana hsp90A gene 48 0.007
33gb|AY128296.1| Arabidopsis thaliana AT5g52640/F6N7_13 mRNA, comp... 48 0.007
34dbj|AB025606.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 48 0.007
35dbj|D00710.1|ATHHSP81 Arabidopsis thaliana HSP81-1 gene for 81kD... 48 0.007
36gb|M62984.1|ATHHSP83 A.thaliana heat shock protein 83 mRNA, comp... 48 0.007
37gb|AY344115.1| Toxoplasma gondii heat shock protein 90 mRNA, com... 46 0.026
38gb|AY292370.1| Toxoplasma gondii HSP90 mRNA, complete cds 46 0.026
39gb|BT001091.1| Arabidopsis thaliana At5g52640/F6N7_13 mRNA, comp... 46 0.026
40gb|AF521007.1| Hevea brasiliensis heat shock protein mRNA, compl... 46 0.026
41gb|AF421541.1| Crypthecodinium cohnii Hsp90 mRNA, complete cds 46 0.026
42gb|AF042329.1|AF042329 Eimeria tenella heat shock protein 90 (hs... 46 0.026
43gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.10
44dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.10
45dbj|AK119710.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.10
46dbj|AK119255.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.10
47dbj|AK065431.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.10
48gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.10
49ref|XM_470993.1| Oryza sativa (japonica cultivar-group), predic... 42 0.40
50gb|AY519499.1| Nicotiana tabacum heat shock protein 90 (OINtHsp9... 42 0.40
51gb|AY310789.1| Nicotiana benthamiana clone 10-186 unknown mRNA 42 0.40
52gb|DQ059998.1| Volvox carteri f. nagariensis heat-shock inducibl... 42 0.40
53emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4,... 42 0.40
54dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.40
55dbj|AK110745.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.40
56dbj|AK105370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.40
57dbj|AK063751.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.40
58dbj|AK063698.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.40
59dbj|AK063629.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.40
60emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4,... 42 0.40
61ref|NM_124985.3| Arabidopsis thaliana HSP81-2; ATP binding / unf... 40 1.6
62ref|NM_124982.2| Arabidopsis thaliana ATP binding / unfolded pro... 40 1.6
63gb|AY456093.1| Phytophthora nicotianae heat shock protein 70 (Hs... 40 1.6
64gb|BT000717.1| Arabidopsis thaliana clone RAFL09-76-I24 (R19621)... 40 1.6
65gb|BC008189.1| Mus musculus, clone IMAGE:3584589, mRNA, partial cds 40 1.6
66emb|Y11828.1|ATHSP814 A.thaliana hsp81.4 gene 40 1.6
67gb|AY257488.1| Lycopersicon esculentum HSC2-like mRNA, partial s... 40 1.6
68emb|AL110469.1|SPAC926 S.pombe chromosome I cosmid c926 40 1.6
69gb|AY128805.1| Arabidopsis thaliana heat shock protein 81-2 (At5... 40 1.6
70gb|AY062750.1| Arabidopsis thaliana HEAT SHOCK PROTEIN 81-2 (HSP... 40 1.6
71gb|S77849.1| HSP81-3=heat-shock Protein [Arabidopsis thaliana=th... 40 1.6
72ref|NM_001019786.1| Schizosaccharomyces pombe 972h- hypothetical... 40 1.6
73gb|BT002535.1| Arabidopsis thaliana Unknown protein mRNA, comple... 40 1.6
74dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 1.6
75dbj|AK110411.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.6
76gb|BT001944.1| Arabidopsis thaliana clone C105057 putative heat-... 40 1.6
77gb|AY610240.1| Sus scrofa clone rdbla0126_h3.y1.abd, mRNA sequence 40 1.6
78gb|L35550.1|YSPHSP90X Schizosaccharomyces pombe heat shock prote... 40 1.6
79gb|AY830127.1| Medicago sativa heat shock protein 70 (HSP70-1) m... 38 6.3
80gb|AY372071.1| Nicotiana tabacum heat shock protein 70-3 (HSP70-... 38 6.3
81gb|AC146757.19| Medicago truncatula clone mth2-16n21, complete s... 38 6.3
82gb|AC147536.12| Medicago truncatula clone mth2-9l3, complete seq... 38 6.3
83gb|AY253326.1| Nicotiana tabacum heat shock protein 70 (Hsp70) m... 38 6.3
84gb|AF479058.1| Sandersonia aurantiaca 70 kDa heat shock protein ... 38 6.3
85emb|Z30176.1|TRMHSP70 T.repens (Huia) mRNA for heat shock protei... 38 6.3
86gb|U41653.1|SBU41653 Sorghum bicolor heat shock protein 70 (hsp7... 38 6.3

>gb|AY325266.1| Hordeum vulgare cytosolic heat shock protein 90 (HSP90) mRNA,
            complete cds
          Length = 2553

 Score =  200 bits (101), Expect = 7e-49
 Identities = 124/133 (93%), Gaps = 2/133 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    aactagacggtgcagggcatggacatacgacgacgcgcagccttggcgcttagtcgacct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2219 aactagacggtgcagggcatggacatacgacgacgcgcagccttggcgcttagtcgacct 2160

                                                                        
Query: 61   cctccatcttgctctcaccggcatcatcctccaggggcgnnnnnnnnnggtgtcgttctc 120
            |||||||||||||||||||||||||||||||||||||||         ||||||||||||
Sbjct: 2159 cctccatcttgctctcaccggcatcatcctccaggggcg--gcatgtcggtgtcgttctc 2102

                         
Query: 121  aggcgcctcatcg 133
            |||||||||||||
Sbjct: 2101 aggcgcctcatcg 2089



to top

>emb|X98582.1|TAX98582 T.aestivum mRNA for HSP80-2 protein
          Length = 2378

 Score =  129 bits (65), Expect = 2e-27
 Identities = 115/133 (86%), Gaps = 2/133 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    aactagacggtgcagggcatggacatacgacgacgcgcagccttggcgcttagtcgacct 60
            |||||| |||||||||||||| |||| |||||||  |||| |||||||||||||||||||
Sbjct: 2231 aactaggcggtgcagggcatgaacatccgacgacaggcagacttggcgcttagtcgacct 2172

                                                                        
Query: 61   cctccatcttgctctcaccggcatcatcctccaggggcgnnnnnnnnnggtgtcgttctc 120
            ||||||||||||||||||| || || |||||||||||||         ||||||||||||
Sbjct: 2171 cctccatcttgctctcaccagcgtcgtcctccaggggcg--gcatgtcggtgtcgttctc 2114

                         
Query: 121  aggcgcctcatcg 133
            |||||||||||||
Sbjct: 2113 aggcgcctcatcg 2101



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 44       tggcgcttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
                ||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||
Sbjct: 18460303 tggcgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 18460358



 Score = 67.9 bits (34), Expect = 7e-09
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                  
Query: 50       ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
                ||||||||||||||||||||||||||| ||||| || |||||||| ||||
Sbjct: 18482614 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 18482663



 Score = 67.9 bits (34), Expect = 7e-09
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                  
Query: 50       ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
                ||||||||||||||||||||||||||| ||||| || |||||||| ||||
Sbjct: 18471155 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 18471204



to top

>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0463D04
          Length = 145828

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                      
Query: 44     tggcgcttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
              ||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||
Sbjct: 122177 tggcgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 122232



 Score = 67.9 bits (34), Expect = 7e-09
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                
Query: 50     ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
              ||||||||||||||||||||||||||| ||||| || |||||||| ||||
Sbjct: 144488 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 144537



 Score = 67.9 bits (34), Expect = 7e-09
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                
Query: 50     ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
              ||||||||||||||||||||||||||| ||||| || |||||||| ||||
Sbjct: 133029 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 133078



to top

>dbj|AB111810.1| Oryza sativa (japonica cultivar-group) Hsp90 mRNA for heat shock
            protein 90, complete cds
          Length = 2408

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                    
Query: 44   tggcgcttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
            ||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||
Sbjct: 2211 tggcgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 2156



to top

>emb|Z15018.1|OSHSP82G O.sativa hsp82 gene for heat shock protein 82
          Length = 704

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 44  tggcgcttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
           ||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||
Sbjct: 271 tggcgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 216



to top

>dbj|AK064780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B06, full
            insert sequence
          Length = 2410

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                    
Query: 44   tggcgcttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
            ||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||
Sbjct: 2232 tggcgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 2177



to top

>gb|BT016606.1| Zea mays clone Contig439 mRNA sequence
          Length = 867

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                          
Query: 48  gcttagtcgacctcctccatcttgctctcaccggcatcatcctccag 94
           ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 536 gcttagtcgacctcctccatcttgctctcgccagcgtcatcctccag 490



to top

>gb|BT024184.1| Zea mays clone EL01N0315D01 mRNA sequence
          Length = 1740

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 48   gcttagtcgacctcctccatcttgctctcaccggcatcatcctccag 94
            ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 1480 gcttagtcgacctcctccatcttgctctcgccagcgtcatcctccag 1434



to top

>gb|AY110769.1| Zea mays CL1264_4 mRNA sequence
          Length = 864

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                          
Query: 48  gcttagtcgacctcctccatcttgctctcaccggcatcatcctccag 94
           ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 534 gcttagtcgacctcctccatcttgctctcgccagcgtcatcctccag 488



to top

>gb|AY105939.1| Zea mays PCO150588 mRNA sequence
          Length = 1101

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                          
Query: 48  gcttagtcgacctcctccatcttgctctcaccggcatcatcctccag 94
           |||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 896 gcttagtcgacctcctccatcttgctttcgccggcgtcatcctccag 850



to top

>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0087J09, complete sequence
          Length = 153351

 Score = 67.9 bits (34), Expect = 7e-09
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 50    ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
             ||||||||||||||||||||||||||| ||||| || |||||||| ||||
Sbjct: 10620 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 10669



to top

>dbj|AK061896.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G11, full
            insert sequence
          Length = 2440

 Score = 67.9 bits (34), Expect = 7e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 50   ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
            ||||||||||||||||||||||||||| ||||| || |||||||| ||||
Sbjct: 2224 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 2175



to top

>dbj|D29709.1|RICYK21 Oryza sativa mRNA, partial homologous to heat shock protein 82 gene
          Length = 371

 Score = 67.9 bits (34), Expect = 7e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 50  ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
           ||||||||||||||||||||||||||| ||||| || |||||||| ||||
Sbjct: 198 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 149



to top

>dbj|AK121906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105K15, full
            insert sequence
          Length = 1278

 Score = 67.9 bits (34), Expect = 7e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 50   ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
            ||||||||||||||||||||||||||| ||||| || |||||||| ||||
Sbjct: 1064 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 1015



to top

>dbj|AK119663.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-B04, full
            insert sequence
          Length = 1538

 Score = 67.9 bits (34), Expect = 7e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 50   ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
            ||||||||||||||||||||||||||| ||||| || |||||||| ||||
Sbjct: 1355 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcg 1306



to top

>emb|Z11920.1|OSHSP82A O.sativa gene for heat shock protein 82 HSP82
          Length = 5310

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 47   cgcttagtcgacctcctccatcttgctctcaccggcatcatcctc 91
            |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 4934 cgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctc 4890



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                             
Query: 47       cgcttagtcgacctcctccatcttgctctcaccggcatcatcctc 91
                |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 24712197 cgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctc 24712241



to top

>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1345_D02
          Length = 159613

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                          
Query: 47    cgcttagtcgacctcctccatcttgctctcaccggcatcatcctc 91
             |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 12998 cgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctc 13042



to top

>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_A06
          Length = 92836

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                          
Query: 47    cgcttagtcgacctcctccatcttgctctcaccggcatcatcctc 91
             |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 84501 cgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctc 84545



to top

>dbj|AK102426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093F17, full
            insert sequence
          Length = 3149

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 47   cgcttagtcgacctcctccatcttgctctcaccggcatcatcctc 91
            |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 2912 cgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctc 2868



to top

>gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRNA, complete cds
          Length = 2397

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 51   tagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
            |||||||||||||||||||||||||| ||||| || |||||||| ||||
Sbjct: 2211 tagtcgacctcctccatcttgctctcgccggcgtcctcctccagcggcg 2163



to top

>gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence
          Length = 2179

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 51   tagtcgacctcctccatcttgctctcaccggcatcatcctccag 94
            |||||||||||||||||||||||||| || || |||||||||||
Sbjct: 2033 tagtcgacctcctccatcttgctctcgccagcgtcatcctccag 1990



to top

>gb|AY109427.1| Zea mays CL1264_2 mRNA sequence
          Length = 1267

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 51   tagtcgacctcctccatcttgctctcaccggcatcatcctccag 94
            |||||||||||||||||||||||||| || || |||||||||||
Sbjct: 1016 tagtcgacctcctccatcttgctctcgccagcgtcatcctccag 973



to top

>dbj|D21284.1|RICAD167 Oryza sativa AD167 mRNA for heat shock protein 82, partial sequence
          Length = 474

 Score = 61.9 bits (31), Expect = 4e-07
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 50  ttagtcgacctcctccatcttgctctcaccggcatcatcctccaggggcg 99
           |||||||||||||||||||||||||||  |||| || |||||||| ||||
Sbjct: 270 ttagtcgacctcctccatcttgctctcgncggcgtcgtcctccagcggcg 221



to top

>ref|XM_483191.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2100

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 50   ttagtcgacctcctccatcttgctctcaccggcatcatcctc 91
            ||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 2100 ttagtcgacctcctccatcttgctctcgccggcgtcgtcctc 2059



to top

>gb|AY103538.1| Zea mays PCO150589 mRNA sequence
          Length = 2534

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 49   cttagtcgacctcctccatcttgctctcacc 79
            ||||||||||||||||||||||||| |||||
Sbjct: 2280 cttagtcgacctcctccatcttgctttcacc 2250



to top

>emb|X67711.2|OSHSC70A O.sativa hsp70 gene for heat shock protein 70
          Length = 4791

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 43   ttggcgcttagtcgacctcctccatcttg 71
            |||||||||||||||||||||| ||||||
Sbjct: 4581 ttggcgcttagtcgacctcctcgatcttg 4553



to top

>gb|S59780.1|S59780 Zea mays heat shock protein HSP82 (hsp82) gene, complete cds
          Length = 3468

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 52   agtcgacctcctccatcttgctctc 76
            |||||||||||||||||||||||||
Sbjct: 2970 agtcgacctcctccatcttgctctc 2946



to top

>emb|Z15024.1|OSHSP82MR O.sativa (Taichung Native One) hsp82 mRNA for heat shock protein 82
          Length = 368

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 50  ttagtcgacctcctccatcttgctctcaccggcatcatcctccag 94
           |||||||||||||||||||||  |||| ||||| || ||||||||
Sbjct: 220 ttagtcgacctcctccatcttcgtctcgccggcgtcgtcctccag 176



to top

>ref|NM_124642.2| Arabidopsis thaliana HSP81-1 (HEAT SHOCK PROTEIN 81-1); ATP binding /
            unfolded protein binding AT5G52640 (HSP81-1) mRNA,
            complete cds
          Length = 2440

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 49   cttagtcgacctcctccatcttgctctc 76
            |||||||||| |||||||||||||||||
Sbjct: 2227 cttagtcgacttcctccatcttgctctc 2200



to top

>emb|Y07613.1|ATHSP90A A.thaliana hsp90A gene
          Length = 3413

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 49   cttagtcgacctcctccatcttgctctc 76
            |||||||||| |||||||||||||||||
Sbjct: 3216 cttagtcgacttcctccatcttgctctc 3189



to top

>gb|AY128296.1| Arabidopsis thaliana AT5g52640/F6N7_13 mRNA, complete cds
          Length = 2441

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 49   cttagtcgacctcctccatcttgctctc 76
            |||||||||| |||||||||||||||||
Sbjct: 2227 cttagtcgacttcctccatcttgctctc 2200



to top

>dbj|AB025606.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F6N7
          Length = 74282

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 49    cttagtcgacctcctccatcttgctctc 76
             |||||||||| |||||||||||||||||
Sbjct: 34486 cttagtcgacttcctccatcttgctctc 34459



to top

>dbj|D00710.1|ATHHSP81 Arabidopsis thaliana HSP81-1 gene for 81kDa heat-shock protein,
            complete cds
          Length = 3213

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 49   cttagtcgacctcctccatcttgctctc 76
            |||||||||| |||||||||||||||||
Sbjct: 3056 cttagtcgacttcctccatcttgctctc 3029



to top

>gb|M62984.1|ATHHSP83 A.thaliana heat shock protein 83 mRNA, complete cds
          Length = 2390

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 49   cttagtcgacctcctccatcttgctctc 76
            |||||||||| |||||||||||||||||
Sbjct: 2188 cttagtcgacttcctccatcttgctctc 2161



to top

>gb|AY344115.1| Toxoplasma gondii heat shock protein 90 mRNA, complete cds
          Length = 2933

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 48   gcttagtcgacctcctccatctt 70
            |||||||||||||||||||||||
Sbjct: 2261 gcttagtcgacctcctccatctt 2239



to top

>gb|AY292370.1| Toxoplasma gondii HSP90 mRNA, complete cds
          Length = 2966

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 48   gcttagtcgacctcctccatctt 70
            |||||||||||||||||||||||
Sbjct: 2279 gcttagtcgacctcctccatctt 2257



to top

>gb|BT001091.1| Arabidopsis thaliana At5g52640/F6N7_13 mRNA, complete cds
          Length = 2118

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 50   ttagtcgacctcctccatcttgctctc 76
            ||||||||| |||||||||||||||||
Sbjct: 2118 ttagtcgacttcctccatcttgctctc 2092



to top

>gb|AF521007.1| Hevea brasiliensis heat shock protein mRNA, complete cds
          Length = 2405

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 50   ttagtcgacctcctccatcttgctctc 76
            ||||||||| |||||||||||||||||
Sbjct: 2217 ttagtcgacttcctccatcttgctctc 2191



to top

>gb|AF421541.1| Crypthecodinium cohnii Hsp90 mRNA, complete cds
          Length = 2540

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 49   cttagtcgacctcctccatcttg 71
            |||||||||||||||||||||||
Sbjct: 2196 cttagtcgacctcctccatcttg 2174



to top

>gb|AF042329.1|AF042329 Eimeria tenella heat shock protein 90 (hsp90) mRNA, complete cds
          Length = 2505

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 49   cttagtcgacctcctccatcttg 71
            |||||||||||||||||||||||
Sbjct: 2253 cttagtcgacctcctccatcttg 2231



to top

>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16
              map C481S, complete sequence
          Length = 179668

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 46     gcgcttagtcgacctcctccatcttg 71
              ||||||||||||||||||| ||||||
Sbjct: 135642 gcgcttagtcgacctcctcgatcttg 135617



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 46       gcgcttagtcgacctcctccatcttg 71
                ||||||||||||||||||| ||||||
Sbjct: 28177087 gcgcttagtcgacctcctcgatcttg 28177062



to top

>dbj|AK119710.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-E11, full
           insert sequence
          Length = 529

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 46  gcgcttagtcgacctcctccatcttg 71
           ||||||||||||||||||| ||||||
Sbjct: 318 gcgcttagtcgacctcctcgatcttg 293



to top

>dbj|AK119255.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-H02, full
            insert sequence
          Length = 2311

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 46   gcgcttagtcgacctcctccatcttg 71
            ||||||||||||||||||| ||||||
Sbjct: 2128 gcgcttagtcgacctcctcgatcttg 2103



to top

>dbj|AK065431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021C17, full
            insert sequence
          Length = 2380

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 46   gcgcttagtcgacctcctccatcttg 71
            ||||||||||||||||||| ||||||
Sbjct: 2026 gcgcttagtcgacctcctcgatcttg 2001



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 46       gcgcttagtcgacctcctccatcttg 71
                ||||||||||||||||||| ||||||
Sbjct: 28161965 gcgcttagtcgacctcctcgatcttg 28161940



to top

>ref|XM_470993.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2112

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 52   agtcgacctcctccatcttgctctc 76
            |||| ||||||||||||||||||||
Sbjct: 2110 agtccacctcctccatcttgctctc 2086



to top

>gb|AY519499.1| Nicotiana tabacum heat shock protein 90 (OINtHsp90) mRNA, complete
            cds
          Length = 2306

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 49   cttagtcgacctcctccatcttgct 73
            ||||||| |||||||||||||||||
Sbjct: 2141 cttagtcaacctcctccatcttgct 2117



to top

>gb|AY310789.1| Nicotiana benthamiana clone 10-186 unknown mRNA
          Length = 2317

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 49   cttagtcgacctcctccatcttgct 73
            ||||||| |||||||||||||||||
Sbjct: 2146 cttagtcaacctcctccatcttgct 2122



to top

>gb|DQ059998.1| Volvox carteri f. nagariensis heat-shock inducible Hsp70 (hsp70A)
            gene, complete cds
          Length = 6449

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 47   cgcttagtcgacctcctccatcttg 71
            |||||||||||||||||| ||||||
Sbjct: 5697 cgcttagtcgacctcctcgatcttg 5673



to top

>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06,
            complete sequence
          Length = 143730

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 52   agtcgacctcctccatcttgctctc 76
            |||| ||||||||||||||||||||
Sbjct: 7230 agtccacctcctccatcttgctctc 7206



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 52     agtcgacctcctccatcttgctctc 76
              |||| ||||||||||||||||||||
Sbjct: 476262 agtccacctcctccatcttgctctc 476238



to top

>dbj|AK110745.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-F12, full
            insert sequence
          Length = 2441

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 47   cgcttagtcgacctcctccat 67
            |||||||||||||||||||||
Sbjct: 2237 cgcttagtcgacctcctccat 2217



to top

>dbj|AK105370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-C06, full
           insert sequence
          Length = 375

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 52  agtcgacctcctccatcttgctctc 76
           |||| ||||||||||||||||||||
Sbjct: 120 agtccacctcctccatcttgctctc 96



to top

>dbj|AK063751.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-G12, full
           insert sequence
          Length = 530

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 52  agtcgacctcctccatcttgctctc 76
           |||| ||||||||||||||||||||
Sbjct: 307 agtccacctcctccatcttgctctc 283



to top

>dbj|AK063698.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-G05, full
           insert sequence
          Length = 520

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 52  agtcgacctcctccatcttgctctc 76
           |||| ||||||||||||||||||||
Sbjct: 285 agtccacctcctccatcttgctctc 261



to top

>dbj|AK063629.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-F05, full
           insert sequence
          Length = 561

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 52  agtcgacctcctccatcttgctctc 76
           |||| ||||||||||||||||||||
Sbjct: 306 agtccacctcctccatcttgctctc 282



to top

>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13,
              complete sequence
          Length = 130249

 Score = 42.1 bits (21), Expect = 0.40
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 52     agtcgacctcctccatcttgctctc 76
              |||| ||||||||||||||||||||
Sbjct: 115014 agtccacctcctccatcttgctctc 114990



to top

>ref|NM_124985.3| Arabidopsis thaliana HSP81-2; ATP binding / unfolded protein binding
            AT5G56030 (HSP81-2) mRNA, complete cds
          Length = 2408

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 50   ttagtcgacctcctccatcttgct 73
            ||||||||| ||||||||||||||
Sbjct: 2191 ttagtcgacttcctccatcttgct 2168



to top

>ref|NM_124982.2| Arabidopsis thaliana ATP binding / unfolded protein binding AT5G56000
            mRNA, complete cds
          Length = 2336

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 50   ttagtcgacctcctccatcttgct 73
            ||||||||| ||||||||||||||
Sbjct: 2185 ttagtcgacttcctccatcttgct 2162



to top

>gb|AY456093.1| Phytophthora nicotianae heat shock protein 70 (Hsp70a) gene,
           complete cds
          Length = 4220

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 48  gcttagtcgacctcctccatcttg 71
           ||||||||||||||||| ||||||
Sbjct: 412 gcttagtcgacctcctcaatcttg 435



to top

>gb|BT000717.1| Arabidopsis thaliana clone RAFL09-76-I24 (R19621) putative heat shock
            protein 81-2 (HSP81-2) (At5g56030) mRNA, complete cds
          Length = 2384

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 50   ttagtcgacctcctccatcttgct 73
            ||||||||| ||||||||||||||
Sbjct: 2189 ttagtcgacttcctccatcttgct 2166



to top

>gb|BC008189.1| Mus musculus, clone IMAGE:3584589, mRNA, partial cds
          Length = 1728

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 48   gcttagtcgacctcctccatcttg 71
            ||||||||||| ||||||||||||
Sbjct: 1478 gcttagtcgacttcctccatcttg 1455



to top

>emb|Y11828.1|ATHSP814 A.thaliana hsp81.4 gene
          Length = 2507

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 50   ttagtcgacctcctccatcttgct 73
            ||||||||| ||||||||||||||
Sbjct: 2489 ttagtcgacttcctccatcttgct 2466



to top

>gb|AY257488.1| Lycopersicon esculentum HSC2-like mRNA, partial sequence
          Length = 804

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 48  gcttagtcgacctcctccatcttg 71
           ||||||||||||||||| ||||||
Sbjct: 613 gcttagtcgacctcctcgatcttg 590



to top

>emb|AL110469.1|SPAC926 S.pombe chromosome I cosmid c926
          Length = 23193

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 54   tcgacctcctccatcttgctctca 77
            ||||| ||||||||||||||||||
Sbjct: 4861 tcgacttcctccatcttgctctca 4884



to top

>gb|AY128805.1| Arabidopsis thaliana heat shock protein 81-2 (At5g56030) mRNA,
            complete cds
          Length = 2261

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 50   ttagtcgacctcctccatcttgct 73
            ||||||||| ||||||||||||||
Sbjct: 2100 ttagtcgacttcctccatcttgct 2077



to top

>gb|AY062750.1| Arabidopsis thaliana HEAT SHOCK PROTEIN 81-2 (HSP81-2) (MDA7.7) mRNA,
            complete cds
          Length = 2382

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 50   ttagtcgacctcctccatcttgct 73
            ||||||||| ||||||||||||||
Sbjct: 2186 ttagtcgacttcctccatcttgct 2163



to top

>gb|S77849.1| HSP81-3=heat-shock Protein [Arabidopsis thaliana=thale-cress,
            Genomic, 3094 nt]
          Length = 3094

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 50   ttagtcgacctcctccatcttgct 73
            ||||||||| ||||||||||||||
Sbjct: 2833 ttagtcgacttcctccatcttgct 2810



to top

>ref|NM_001019786.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC926.04c),
            partial mRNA
          Length = 2115

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 54   tcgacctcctccatcttgctctca 77
            ||||| ||||||||||||||||||
Sbjct: 2111 tcgacttcctccatcttgctctca 2088



to top

>gb|BT002535.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 2302

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 50   ttagtcgacctcctccatcttgct 73
            ||||||||| ||||||||||||||
Sbjct: 2189 ttagtcgacttcctccatcttgct 2166



to top

>dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDA7
          Length = 82033

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 50    ttagtcgacctcctccatcttgct 73
             ||||||||| ||||||||||||||
Sbjct: 23753 ttagtcgacttcctccatcttgct 23730



 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 50    ttagtcgacctcctccatcttgct 73
             ||||||||| ||||||||||||||
Sbjct: 11922 ttagtcgacttcctccatcttgct 11945



to top

>dbj|AK110411.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-H01, full
            insert sequence
          Length = 2819

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 48   gcttagtcgacctcctccat 67
            ||||||||||||||||||||
Sbjct: 2200 gcttagtcgacctcctccat 2181



to top

>gb|BT001944.1| Arabidopsis thaliana clone C105057 putative heat-shock protein
            HSP81-2 (At5g56030) mRNA, complete cds
          Length = 2131

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 50   ttagtcgacctcctccatcttgct 73
            ||||||||| ||||||||||||||
Sbjct: 2100 ttagtcgacttcctccatcttgct 2077



to top

>gb|AY610240.1| Sus scrofa clone rdbla0126_h3.y1.abd, mRNA sequence
          Length = 561

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 80  ggcatcatcctccaggggcg 99
           ||||||||||||||||||||
Sbjct: 251 ggcatcatcctccaggggcg 232



to top

>gb|L35550.1|YSPHSP90X Schizosaccharomyces pombe heat shock protein 90 (Hsp90) gene,
            complete cds
          Length = 2535

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 54   tcgacctcctccatcttgctctca 77
            ||||| ||||||||||||||||||
Sbjct: 2516 tcgacttcctccatcttgctctca 2493



to top

>gb|AY830127.1| Medicago sativa heat shock protein 70 (HSP70-1) mRNA, complete cds
          Length = 2302

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 49   cttagtcgacctcctccatcttg 71
            |||||||||||||||| ||||||
Sbjct: 2055 cttagtcgacctcctcaatcttg 2033



to top

>gb|AY372071.1| Nicotiana tabacum heat shock protein 70-3 (HSP70-3) gene, complete
            cds
          Length = 3208

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 49   cttagtcgacctcctccatcttg 71
            |||||||||||||||| ||||||
Sbjct: 3012 cttagtcgacctcctcaatcttg 2990



to top

>gb|AC146757.19| Medicago truncatula clone mth2-16n21, complete sequence
          Length = 135915

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 49     cttagtcgacctcctccatcttg 71
              |||||||||||||||| ||||||
Sbjct: 118328 cttagtcgacctcctcaatcttg 118350



to top

>gb|AC147536.12| Medicago truncatula clone mth2-9l3, complete sequence
          Length = 111486

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 49    cttagtcgacctcctccatcttg 71
             |||||||||||||||| ||||||
Sbjct: 93896 cttagtcgacctcctcaatcttg 93918



to top

>gb|AY253326.1| Nicotiana tabacum heat shock protein 70 (Hsp70) mRNA, complete cds
          Length = 2259

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 49   cttagtcgacctcctccatcttg 71
            |||||||||||||||| ||||||
Sbjct: 2050 cttagtcgacctcctcaatcttg 2028



to top

>gb|AF479058.1| Sandersonia aurantiaca 70 kDa heat shock protein mRNA, complete cds
          Length = 1241

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 49   cttagtcgacctcctccatcttg 71
            |||||||||||||||| ||||||
Sbjct: 1077 cttagtcgacctcctcaatcttg 1055



to top

>emb|Z30176.1|TRMHSP70 T.repens (Huia) mRNA for heat shock protein 70
          Length = 554

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 49  cttagtcgacctcctccatcttg 71
           |||||||||||||||| ||||||
Sbjct: 398 cttagtcgacctcctcaatcttg 376



to top

>gb|U41653.1|SBU41653 Sorghum bicolor heat shock protein 70 (hsp70) pseudogene
          Length = 3305

 Score = 38.2 bits (19), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 49   cttagtcgacctcctccatcttg 71
            |||||||||||||||| ||||||
Sbjct: 3123 cttagtcgacctcctcaatcttg 3101


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 697,864
Number of Sequences: 3902068
Number of extensions: 697864
Number of successful extensions: 44821
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44593
Number of HSP's gapped (non-prelim): 228
length of query: 133
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 112
effective length of database: 17,151,101,840
effective search space: 1920923406080
effective search space used: 1920923406080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top