ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6n07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009432.1| Triticum aestivum clone wlmk1.pk0037.b8:fis, full... 519 e-144
2ref|XM_464729.1| Oryza sativa (japonica cultivar-group), mRNA 133 8e-28
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
4dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
5dbj|AK101100.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 8e-28
6gb|AF081923.1|AF081923 Oryza sativa protein phosphatase 2A 55 kD... 123 7e-25
7gb|AF081922.1|AF081922 Oryza sativa protein phosphatase 2A 55 kD... 123 7e-25
8gb|AY107787.1| Zea mays PCO092262 mRNA sequence 119 1e-23
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 113 7e-22
10dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic D... 113 7e-22
11dbj|AK111862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 7e-22
12dbj|AK111494.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 7e-22
13gb|AY111072.1| Zea mays CL5330_1 mRNA sequence 80 1e-11
14gb|AF196288.1|AF196288 Medicago sativa subsp. x varia Ser/Thr sp... 78 4e-11
15gb|BT014615.1| Lycopersicon esculentum clone 134101F, mRNA sequence 74 6e-10
16gb|AC172859.1| Brassica rapa subsp. pekinensis clone KBrB023K01,... 72 2e-09
17ref|NM_179350.1| Arabidopsis thaliana ATB BETA; nucleotide bindi... 70 1e-08
18ref|NM_101634.2| Arabidopsis thaliana ATB BETA; nucleotide bindi... 70 1e-08
19gb|BT000645.1| Arabidopsis thaliana hypothetical protein (At1g1... 70 1e-08
20gb|AY045665.1| Arabidopsis thaliana At1g17720/F11A6_14 mRNA, com... 70 1e-08
21gb|AF370519.1|AF370519 Arabidopsis thaliana type 2A protein seri... 70 1e-08
22emb|BX815433.1|CNS0AATQ Arabidopsis thaliana Full-length cDNA Co... 70 1e-08
23gb|AC034257.3|AC034257 Arabidopsis thaliana chromosome I BAC F11... 70 1e-08
24gb|BT002183.1| Arabidopsis thaliana type 2A protein serine/threo... 70 1e-08
25gb|U40161.1|ATU40161 Arabidopsis thaliana type 2A protein serine... 70 1e-08
26gb|U18129.1|ATU18129 Arabidopsis thaliana 55 kDa B regulatory su... 66 2e-07
27ref|NM_202274.1| Arabidopsis thaliana ATB ALPHA; nucleotide bind... 66 2e-07
28ref|NM_104047.2| Arabidopsis thaliana ATB ALPHA; nucleotide bind... 66 2e-07
29gb|BT000109.1| Arabidopsis thaliana type 2A protein serine/threo... 66 2e-07
30gb|AY120756.1| Arabidopsis thaliana type 2A protein serine/threo... 66 2e-07
31gb|AC025294.14|AC025294 Arabidopsis thaliana chromosome 1 BAC F1... 66 2e-07
32emb|BX816494.1|CNS0AAKJ Arabidopsis thaliana Full-length cDNA Co... 66 2e-07
33gb|AF196289.1|AF196289 Medicago sativa subsp. x varia Ser/Thr sp... 60 9e-06
34ref|XM_463396.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
35gb|BT018248.1| Zea mays clone EL01N0563E09.c mRNA sequence 52 0.002
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
37dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
38dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
39emb|AL031798.1|SPCC576 S.pombe chromosome III cosmid c576 44 0.55
40ref|NM_001023423.1| Schizosaccharomyces pombe 972h- hypothetical... 44 0.55
41gb|AY107929.1| Zea mays PCO096026 mRNA sequence 44 0.55
42emb|AJ937769.1| Uncultured epsilon proteobacterium fosmid clone ... 44 0.55
43gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome 42 2.2
44emb|AJ347812.1|SPY347812 Streptococcus pyogenes partial sfbI gen... 42 2.2
45emb|AJ347839.1|SPY347839 Streptococcus pyogenes sfbI gene for fi... 42 2.2
46emb|AJ347838.1|SPY347838 Streptococcus pyogenes sfbI gene for fi... 42 2.2
47emb|AJ347837.1|SPY347837 Streptococcus pyogenes sfbI gene for fi... 42 2.2
48emb|AJ347836.1|SPY347836 Streptococcus pyogenes sfbI gene for fi... 42 2.2
49emb|AJ347835.1|SPY347835 Streptococcus pyogenes sfbI gene for fi... 42 2.2
50emb|AJ347813.1|SPY347813 Streptococcus pyogenes partial sfbI gen... 42 2.2
51emb|AJ347811.1|SPY347811 Streptococcus pyogenes partial sfbI gen... 42 2.2
52emb|AJ347810.1|SPY347810 Streptococcus pyogenes partial sfbI gen... 42 2.2
53emb|AJ347809.1|SPY347809 Streptococcus pyogenes partial sfbI gen... 42 2.2
54emb|AJ347808.1|SPY347808 Streptococcus pyogenes partial sfbI gen... 42 2.2
55gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
56gb|AC118346.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
57gb|AC119420.12| Mus musculus strain 129S6/SvEvTac clone rp22-121... 42 2.2
58emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chro... 42 2.2
59emb|AL611937.6| Mouse DNA sequence from clone RP23-221M24 on chr... 42 2.2
60emb|BX511227.7| Zebrafish DNA sequence from clone DKEY-100E19 in... 42 2.2
61dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome 42 2.2
62dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
63dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
64dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
65dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
66dbj|AP005892.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
67gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
68gb|AE014828.1| Plasmodium falciparum 3D7 chromosome 14 section 1... 40 8.6
69gb|AC167711.1| Medicago truncatula chromosome 7 BAC clone mth2-1... 40 8.6
70gb|AC125543.3| Mus musculus BAC clone RP23-360H5 from chromosome... 40 8.6
71gb|AC122847.4| Mus musculus BAC clone RP23-163F2 from 6, complet... 40 8.6
72gb|AC165350.3| Mus musculus BAC clone RP23-249A17 from chromosom... 40 8.6
73gb|AC142284.1| Pan troglodytes BAC clone RP43-163P11 from 7, com... 40 8.6
74emb|AL035251.11|HS705O1 Human DNA sequence from clone RP4-705O1 ... 40 8.6
75emb|AL138659.1|ATT16L24 Arabidopsis thaliana DNA chromosome 3, B... 40 8.6
76emb|AL671560.7| Mouse DNA sequence from clone RP23-149A5 on chro... 40 8.6
77gb|AC023385.10| Homo sapiens chromosome 8, clone RP11-675P19, co... 40 8.6
78gb|AC024109.18| Homo sapiens 3 BAC RP11-32F4 (Roswell Park Cance... 40 8.6
79gb|AC079200.6| Homo sapiens chromosome 8, clone RP11-1058B24, co... 40 8.6
80gb|AC007923.7| Homo sapiens chromosome 17, clone RP11-805L22, co... 40 8.6
81gb|AC080009.13| Homo sapiens 3q BAC RP11-460M17 (Roswell Park Ca... 40 8.6
82gb|AC004886.1| Homo sapiens PAC clone RP4-784G16 from 7, complet... 40 8.6
83gb|AY958432.1| Homo sapiens methionine sulfoxide reductase gene,... 40 8.6
84gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome... 40 8.6
85gb|AC006423.7|AC006423 Arabidopsis thaliana chromosome I BAC F28... 40 8.6
86gb|AC134462.5| Mus musculus BAC clone RP23-391L12 from chromosom... 40 8.6
87gb|AC174768.1| Gasterosteus aculeatus clone VMRC28-49C14, comple... 40 8.6
88gb|AC130824.4| Mus musculus BAC clone RP23-349B5 from 12, comple... 40 8.6 
>gb|BT009432.1| Triticum aestivum clone wlmk1.pk0037.b8:fis, full insert mRNA
            sequence
          Length = 2324

 Score =  519 bits (262), Expect = e-144
 Identities = 305/318 (95%), Gaps = 1/318 (0%)
 Strand = Plus / Minus

                                                                        
Query: 317  gtgcgattagaatttgtgtttcacatttactaaagaatcagaaggaaatagtctgctatg 376
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1901 gtgcgattagaatttgtgtttcacatttactaaagaatcagaaggaaatagtctgctatg 1842

                                                                        
Query: 377  cttggagttggaggatatccatcccctgggtgccaaccgcctcttccgacccccaatcac 436
            |||||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||
Sbjct: 1841 cttggagttgaaggatatccatcccgtgggtgccaaccgcctctttcgacccc-aatcac 1783

                                                                        
Query: 437  agaattgatgacaatgttctgcaccatttctctggttgcatgtgcaaggccgaagctttc 496
             ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 1782 ggaattgacgacaatgtcctgcaccatttccctggttgcatgtgcaaggcccaagctttc 1723

                                                                        
Query: 497  acgttgcacaaaccaaaaacagtgaatcttctctagcacattccctatgcataatacatg 556
            || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1722 acattgaacaaaccaaaaacagtgaatcttctctagcacattccctatgcataatacatg 1663

                                                                        
Query: 557  tacaagctatttccagcagcacacgcaatggagttctcagttgggtgccacgcaagatgg 616
            ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1662 tacaagctattcccagcagcacacgcaatggaattctcagttgggtgccacgcaagatgg 1603

                              
Query: 617  agtaactttgttgagaag 634
            ||||||||||||||||||
Sbjct: 1602 agtaactttgttgagaag 1585



 Score =  343 bits (173), Expect = 4e-91
 Identities = 213/225 (94%), Gaps = 6/225 (2%)
 Strand = Plus / Minus

                                                                        
Query: 92   ctacaagtcataatttatgtccacagnatgtttcaccgttggtgacagcagatggttaaa 151
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 2144 ctacaagtcataatttatgtccacag-atgtttcaccgttggtgacagcagatggttaac 2086

                                                                        
Query: 152  cctggctaggcggcattacattacacttgatgaagagaaaagaaaatttcttacatccac 211
            |||||||||||| |||||||||||| ||||     ||| ||| |||||||||||||||||
Sbjct: 2085 cctggctaggcgacattacattacatttga-----agagaagcaaatttcttacatccac 2031

                                                                        
Query: 212  cgtaagcagatatttcctgggaccaagtgaaattagaatcagccttgctatcttctgctc 271
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2030 cgtaagcagatatttcctgtgaccaagtgaaattagaatcagccttgctatcttctgctc 1971

                                                         
Query: 272  tgtcctccaactgctggtgttttggctacacatgcagctacaatc 316
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1970 tgtcctccaactgctggtgttttggctacacatgcagctacaatc 1926



 Score =  121 bits (61), Expect = 3e-24
 Identities = 71/73 (97%), Gaps = 1/73 (1%)
 Strand = Plus / Minus

                                                                        
Query: 4    agccgatcacatgcagcaggnagttgagtcacacctgcaaacttattgtaagtttcgacc 63
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 2230 agccgatcacatgcagcagg-agttgagtcacacctgcaaacttattgtaagtttggacc 2172

                         
Query: 64   accaacaaataga 76
            |||||||||||||
Sbjct: 2171 accaacaaataga 2159
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>ref|XM_464729.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2237

 Score =  133 bits (67), Expect = 8e-28
 Identities = 85/91 (93%)
 Strand = Plus / Minus

                                                                        
Query: 540  cctatgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttg 599
            |||||||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||||
Sbjct: 1754 cctatgcatagtacatgtacaagctatttgcagcagcacacgcgatggaattctcagttg 1695

                                           
Query: 600  ggtgccacgcaagatggagtaactttgttga 630
            ||||||| ||||||||||| |||||||||||
Sbjct: 1694 ggtgccatgcaagatggagcaactttgttga 1664
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  133 bits (67), Expect = 8e-28
 Identities = 85/91 (93%)
 Strand = Plus / Plus

                                                                           
Query: 540     cctatgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttg 599
               |||||||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||||
Sbjct: 6963647 cctatgcatagtacatgtacaagctatttgcagcagcacacgcgatggaattctcagttg 6963706

                                              
Query: 600     ggtgccacgcaagatggagtaactttgttga 630
               ||||||| ||||||||||| |||||||||||
Sbjct: 6963707 ggtgccatgcaagatggagcaactttgttga 6963737
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>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0470A03
          Length = 133167

 Score =  133 bits (67), Expect = 8e-28
 Identities = 85/91 (93%)
 Strand = Plus / Plus

                                                                         
Query: 540   cctatgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttg 599
             |||||||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||||
Sbjct: 57269 cctatgcatagtacatgtacaagctatttgcagcagcacacgcgatggaattctcagttg 57328

                                            
Query: 600   ggtgccacgcaagatggagtaactttgttga 630
             ||||||| ||||||||||| |||||||||||
Sbjct: 57329 ggtgccatgcaagatggagcaactttgttga 57359
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>dbj|AK101100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025A11, full
            insert sequence
          Length = 2238

 Score =  133 bits (67), Expect = 8e-28
 Identities = 85/91 (93%)
 Strand = Plus / Minus

                                                                        
Query: 540  cctatgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttg 599
            |||||||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||||
Sbjct: 1754 cctatgcatagtacatgtacaagctatttgcagcagcacacgcgatggaattctcagttg 1695

                                           
Query: 600  ggtgccacgcaagatggagtaactttgttga 630
            ||||||| ||||||||||| |||||||||||
Sbjct: 1694 ggtgccatgcaagatggagcaactttgttga 1664
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>gb|AF081923.1|AF081923 Oryza sativa protein phosphatase 2A 55 kDa B regulatory subunit mRNA,
            complete cds
          Length = 2132

 Score =  123 bits (62), Expect = 7e-25
 Identities = 80/86 (93%)
 Strand = Plus / Minus

                                                                        
Query: 545  gcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggtgc 604
            ||||| |||||||||||||||||| ||||||||||||| ||||| |||||||||||||||
Sbjct: 1580 gcatagtacatgtacaagctatttgcagcagcacacgcgatggaattctcagttgggtgc 1521

                                      
Query: 605  cacgcaagatggagtaactttgttga 630
            || ||||||||||| |||||||||||
Sbjct: 1520 catgcaagatggagcaactttgttga 1495
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>gb|AF081922.1|AF081922 Oryza sativa protein phosphatase 2A 55 kDa B regulatory subunit gene,
            complete cds
          Length = 9386

 Score =  123 bits (62), Expect = 7e-25
 Identities = 80/86 (93%)
 Strand = Plus / Minus

                                                                        
Query: 545  gcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggtgc 604
            ||||| |||||||||||||||||| ||||||||||||| ||||| |||||||||||||||
Sbjct: 8413 gcatagtacatgtacaagctatttgcagcagcacacgcgatggaattctcagttgggtgc 8354

                                      
Query: 605  cacgcaagatggagtaactttgttga 630
            || ||||||||||| |||||||||||
Sbjct: 8353 catgcaagatggagcaactttgttga 8328
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>gb|AY107787.1| Zea mays PCO092262 mRNA sequence
          Length = 727

 Score =  119 bits (60), Expect = 1e-23
 Identities = 97/108 (89%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                       
Query: 526 tctctagcacattccc-tatgcataatacatgtacaagctatttccagcagcacacgcaa 584
           |||||||||| ||||| ||||| || |||||||||||||| ||| | ||||| ||||| |
Sbjct: 210 tctctagcacgttcccctatgcgtagtacatgtacaagctgtttgcggcagcgcacgcga 151

                                                           
Query: 585 tggagttctcagttgggtgccacgcaagatggagtaactttgttgaga 632
           |||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 150 tggagttctcagttgggtgccacgcaagatggagcagctttgttgaga 103
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  113 bits (57), Expect = 7e-22
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                            
Query: 507      aaccaaaaacagtgaatcttctctagcacattccctatgcataatacatgtacaagctat 566
                ||||||||||| | ||| ||||| ||||| ||| ||| ||||||||||| ||||| ||||
Sbjct: 21314012 aaccaaaaacaataaattttctcaagcaccttctctacgcataatacatatacaaactat 21313953

                                                                            
Query: 567      ttccagcagcacacgcaatggagttctcagttgggtgccacgcaagatggagtaactttg 626
                || |||||||||| || || || ||||||||||||||||| ||||||||||| |||||||
Sbjct: 21313952 ttgcagcagcacatgcgatagaattctcagttgggtgccatgcaagatggagcaactttg 21313893

                 
Query: 627      t 627
                |
Sbjct: 21313892 t 21313892



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                           
Query: 438      gaattgatgacaatgttctgcaccatttctctggttgcatgtg 480
                ||||||| |||||  | ||||||||| ||||||||||||||||
Sbjct: 21314078 gaattgacgacaacatcctgcaccatatctctggttgcatgtg 21314036



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 177      cttgatgaagagaaaagaaaa 197
                |||||||||||||||||||||
Sbjct: 23774265 cttgatgaagagaaaagaaaa 23774245
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>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0656E03
          Length = 181786

 Score =  113 bits (57), Expect = 7e-22
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                          
Query: 507    aaccaaaaacagtgaatcttctctagcacattccctatgcataatacatgtacaagctat 566
              ||||||||||| | ||| ||||| ||||| ||| ||| ||||||||||| ||||| ||||
Sbjct: 109388 aaccaaaaacaataaattttctcaagcaccttctctacgcataatacatatacaaactat 109329

                                                                          
Query: 567    ttccagcagcacacgcaatggagttctcagttgggtgccacgcaagatggagtaactttg 626
              || |||||||||| || || || ||||||||||||||||| ||||||||||| |||||||
Sbjct: 109328 ttgcagcagcacatgcgatagaattctcagttgggtgccatgcaagatggagcaactttg 109269

               
Query: 627    t 627
              |
Sbjct: 109268 t 109268



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 438    gaattgatgacaatgttctgcaccatttctctggttgcatgtg 480
              ||||||| |||||  | ||||||||| ||||||||||||||||
Sbjct: 109454 gaattgacgacaacatcctgcaccatatctctggttgcatgtg 109412
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>dbj|AK111862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024L19, full
           insert sequence
          Length = 961

 Score =  113 bits (57), Expect = 7e-22
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                       
Query: 507 aaccaaaaacagtgaatcttctctagcacattccctatgcataatacatgtacaagctat 566
           ||||||||||| | ||| ||||| ||||| ||| ||| ||||||||||| ||||| ||||
Sbjct: 513 aaccaaaaacaataaattttctcaagcaccttctctacgcataatacatatacaaactat 454

                                                                       
Query: 567 ttccagcagcacacgcaatggagttctcagttgggtgccacgcaagatggagtaactttg 626
           || |||||||||| || || || ||||||||||||||||| ||||||||||| |||||||
Sbjct: 453 ttgcagcagcacatgcgatagaattctcagttgggtgccatgcaagatggagcaactttg 394

            
Query: 627 t 627
           |
Sbjct: 393 t 393



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 438 gaattgatgacaatgttctgcaccatttctctggttgcatgtg 480
           ||||||| |||||  | ||||||||| ||||||||||||||||
Sbjct: 579 gaattgacgacaacatcctgcaccatatctctggttgcatgtg 537
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>dbj|AK111494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D03, full
           insert sequence
          Length = 2264

 Score =  113 bits (57), Expect = 7e-22
 Identities = 105/121 (86%)
 Strand = Plus / Plus

                                                                       
Query: 507 aaccaaaaacagtgaatcttctctagcacattccctatgcataatacatgtacaagctat 566
           ||||||||||| | ||| ||||| ||||| ||| ||| ||||||||||| ||||| ||||
Sbjct: 434 aaccaaaaacaataaattttctcaagcaccttctctacgcataatacatatacaaactat 493

                                                                       
Query: 567 ttccagcagcacacgcaatggagttctcagttgggtgccacgcaagatggagtaactttg 626
           || |||||||||| || || || ||||||||||||||||| ||||||||||| |||||||
Sbjct: 494 ttgcagcagcacatgcgatagaattctcagttgggtgccatgcaagatggagcaactttg 553

            
Query: 627 t 627
           |
Sbjct: 554 t 554



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 455 ctgcaccatttctctggttgcatgtg 480
           ||||||||| ||||||||||||||||
Sbjct: 385 ctgcaccatatctctggttgcatgtg 410
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>gb|AY111072.1| Zea mays CL5330_1 mRNA sequence
          Length = 796

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 535 cattccctatgcataatacatgtacaagctatttccagcagcacacgcaatggagttctc 594
           ||||| ||| ||||||||||| |||||||||||| |||||||||| ||||| || |||||
Sbjct: 256 cattctctacgcataatacatatacaagctatttgcagcagcacatgcaatagaattctc 197

                                                   
Query: 595 agttgggtgccacgcaagatggagtaactttgttgagaag 634
            || |||||||| || || ||||| | ||| |||||||||
Sbjct: 196 ggtcgggtgccatgcgaggtggagcagcttcgttgagaag 157



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 447 acaatgttctgcaccatttctctggttgca 476
           ||||||| ||||||||| ||||||||||||
Sbjct: 347 acaatgtcctgcaccatctctctggttgca 318
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>gb|AF196288.1|AF196288 Medicago sativa subsp. x varia Ser/Thr specific protein phosphatase
            2A B regulatory subunit alpha isoform mRNA, complete cds
          Length = 2396

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                        
Query: 543  atgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggt 602
            ||||||| |||||||| ||||||||| |||||||||| ||||| ||||| ||| ||||||
Sbjct: 1840 atgcatagtacatgtataagctatttgcagcagcacaagcaattgagttttcacttgggt 1781

                                       
Query: 603  gccacgcaagatggagtaactttgttg 629
            |||| || |  || |||||||||||||
Sbjct: 1780 gccatgctaagtgtagtaactttgttg 1754
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>gb|BT014615.1| Lycopersicon esculentum clone 134101F, mRNA sequence
          Length = 2298

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 542  tatgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttggg 601
            ||||||||||||||||||||||| ||| |||||||||| ||||| || || |||||||| 
Sbjct: 1954 tatgcataatacatgtacaagctgtttgcagcagcacatgcaattgaattttcagttgga 1895

                 
Query: 602  tgcca 606
            |||||
Sbjct: 1894 tgcca 1890
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>gb|AC172859.1| Brassica rapa subsp. pekinensis clone KBrB023K01, complete sequence
          Length = 102061

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                         
Query: 543   atgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggt 602
             |||||||||||||||||||||| ||| | || ||||| ||||| |||||||| |||||||
Sbjct: 80144 atgcataatacatgtacaagctgtttgctgctgcacaagcaattgagttctctgttgggt 80203

                 
Query: 603   gcca 606
             ||||
Sbjct: 80204 gcca 80207
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>ref|NM_179350.1| Arabidopsis thaliana ATB BETA; nucleotide binding AT1G17720 (ATB
            BETA) transcript variant AT1G17720.2 mRNA, complete cds
          Length = 2512

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                        
Query: 543  atgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggt 602
            ||||||| |||||||||||||| ||| | || ||||| ||||| |||||||| |||||||
Sbjct: 1769 atgcatagtacatgtacaagctgtttgctgctgcacaagcaattgagttctctgttgggt 1710

                                       
Query: 603  gccacgcaagatggagtaactttgttg 629
            |||| || | ||| || ||||||||||
Sbjct: 1709 gccaagccatatgcagcaactttgttg 1683
to top
>ref|NM_101634.2| Arabidopsis thaliana ATB BETA; nucleotide binding AT1G17720 (ATB
            BETA) transcript variant AT1G17720.1 mRNA, complete cds
          Length = 2515

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                        
Query: 543  atgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggt 602
            ||||||| |||||||||||||| ||| | || ||||| ||||| |||||||| |||||||
Sbjct: 1772 atgcatagtacatgtacaagctgtttgctgctgcacaagcaattgagttctctgttgggt 1713

                                       
Query: 603  gccacgcaagatggagtaactttgttg 629
            |||| || | ||| || ||||||||||
Sbjct: 1712 gccaagccatatgcagcaactttgttg 1686
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>gb|BT000645.1| Arabidopsis thaliana hypothetical protein  (At1g17720/F11A6_14) mRNA,
            complete cds
          Length = 1506

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                        
Query: 543  atgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggt 602
            ||||||| |||||||||||||| ||| | || ||||| ||||| |||||||| |||||||
Sbjct: 1504 atgcatagtacatgtacaagctgtttgctgctgcacaagcaattgagttctctgttgggt 1445

                                       
Query: 603  gccacgcaagatggagtaactttgttg 629
            |||| || | ||| || ||||||||||
Sbjct: 1444 gccaagccatatgcagcaactttgttg 1418
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>gb|AY045665.1| Arabidopsis thaliana At1g17720/F11A6_14 mRNA, complete cds
          Length = 2416

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                        
Query: 543  atgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggt 602
            ||||||| |||||||||||||| ||| | || ||||| ||||| |||||||| |||||||
Sbjct: 1769 atgcatagtacatgtacaagctgtttgctgctgcacaagcaattgagttctctgttgggt 1710

                                       
Query: 603  gccacgcaagatggagtaactttgttg 629
            |||| || | ||| || ||||||||||
Sbjct: 1709 gccaagccatatgcagcaactttgttg 1683
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>gb|AF370519.1|AF370519 Arabidopsis thaliana type 2A protein serine/threonine phosphatase
            55kDa B regulatory subunit (F11A6.6) mRNA, complete cds
          Length = 2290

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                        
Query: 543  atgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggt 602
            ||||||| |||||||||||||| ||| | || ||||| ||||| |||||||| |||||||
Sbjct: 1769 atgcatagtacatgtacaagctgtttgctgctgcacaagcaattgagttctctgttgggt 1710

                                       
Query: 603  gccacgcaagatggagtaactttgttg 629
            |||| || | ||| || ||||||||||
Sbjct: 1709 gccaagccatatgcagcaactttgttg 1683
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>emb|BX815433.1|CNS0AATQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS5ZF01 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2266

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                        
Query: 543  atgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggt 602
            ||||||| |||||||||||||| ||| | || ||||| ||||| |||||||| |||||||
Sbjct: 1768 atgcatagtacatgtacaagctgtttgctgctgcacaagcaattgagttctctgttgggt 1709

                                       
Query: 603  gccacgcaagatggagtaactttgttg 629
            |||| || | ||| || ||||||||||
Sbjct: 1708 gccaagccatatgcagcaactttgttg 1682
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>gb|AC034257.3|AC034257 Arabidopsis thaliana chromosome I BAC F11A6 genomic sequence, complete
             sequence
          Length = 98950

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Plus

                                                                         
Query: 543   atgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggt 602
             ||||||| |||||||||||||| ||| | || ||||| ||||| |||||||| |||||||
Sbjct: 73712 atgcatagtacatgtacaagctgtttgctgctgcacaagcaattgagttctctgttgggt 73771

                                        
Query: 603   gccacgcaagatggagtaactttgttg 629
             |||| || | ||| || ||||||||||
Sbjct: 73772 gccaagccatatgcagcaactttgttg 73798
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>gb|BT002183.1| Arabidopsis thaliana type 2A protein serine/threonine phosphatase
            55kDa B regulatory subunit (At1g17720) mRNA, complete cds
          Length = 1827

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                        
Query: 543  atgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggt 602
            ||||||| |||||||||||||| ||| | || ||||| ||||| |||||||| |||||||
Sbjct: 1501 atgcatagtacatgtacaagctgtttgctgctgcacaagcaattgagttctctgttgggt 1442

                                       
Query: 603  gccacgcaagatggagtaactttgttg 629
            |||| || | ||| || ||||||||||
Sbjct: 1441 gccaagccatatgcagcaactttgttg 1415
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>gb|U40161.1|ATU40161 Arabidopsis thaliana type 2A protein serine/threonine phosphatase 55
            kDa B regulatory subunit mRNA, complete cds
          Length = 2080

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                        
Query: 543  atgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggt 602
            ||||||| |||||||||||||| ||| | || ||||| ||||| |||||||| |||||||
Sbjct: 1590 atgcatagtacatgtacaagctgtttgctgctgcacaagcaattgagttctctgttgggt 1531

                                       
Query: 603  gccacgcaagatggagtaactttgttg 629
            |||| || | ||| || ||||||||||
Sbjct: 1530 gccaagccatatgcagcaactttgttg 1504
to top
>gb|U18129.1|ATU18129 Arabidopsis thaliana 55 kDa B regulatory subunit of phosphatase 2A
            mRNA, complete cds
          Length = 2106

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                        
Query: 545  gcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggtgc 604
            ||||| |||||||||||||||||| |||| || || ||||| ||||||||  |||| |||
Sbjct: 1724 gcatagtacatgtacaagctatttgcagcggcgcaagcaattgagttctcgtttggatgc 1665

                                     
Query: 605  cacgcaagatggagtaactttgttg 629
            || |||||||| || | ||||||||
Sbjct: 1664 caagcaagatgcagcagctttgttg 1640
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>ref|NM_202274.1| Arabidopsis thaliana ATB ALPHA; nucleotide binding / protein
            phosphatase type 2A regulator AT1G51690 (ATB ALPHA)
            transcript variant AT1G51690.2 mRNA, complete cds
          Length = 2254

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                        
Query: 545  gcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggtgc 604
            ||||| |||||||||||||||||| |||| || || ||||| ||||||||  |||| |||
Sbjct: 1778 gcatagtacatgtacaagctatttgcagcggcgcaagcaattgagttctcgtttggatgc 1719

                                     
Query: 605  cacgcaagatggagtaactttgttg 629
            || |||||||| || | ||||||||
Sbjct: 1718 caagcaagatgcagcagctttgttg 1694
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>ref|NM_104047.2| Arabidopsis thaliana ATB ALPHA; nucleotide binding / protein
            phosphatase type 2A regulator AT1G51690 (ATB ALPHA)
            transcript variant AT1G51690.1 mRNA, complete cds
          Length = 2257

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                        
Query: 545  gcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggtgc 604
            ||||| |||||||||||||||||| |||| || || ||||| ||||||||  |||| |||
Sbjct: 1781 gcatagtacatgtacaagctatttgcagcggcgcaagcaattgagttctcgtttggatgc 1722

                                     
Query: 605  cacgcaagatggagtaactttgttg 629
            || |||||||| || | ||||||||
Sbjct: 1721 caagcaagatgcagcagctttgttg 1697
to top
>gb|BT000109.1| Arabidopsis thaliana type 2A protein serine/threonine phosphatase 55
            kDa B regulatory subunit (At1g51690) mRNA, complete cds
          Length = 1624

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                        
Query: 545  gcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggtgc 604
            ||||| |||||||||||||||||| |||| || || ||||| ||||||||  |||| |||
Sbjct: 1538 gcatagtacatgtacaagctatttgcagcggcgcaagcaattgagttctcgtttggatgc 1479

                                     
Query: 605  cacgcaagatggagtaactttgttg 629
            || |||||||| || | ||||||||
Sbjct: 1478 caagcaagatgcagcagctttgttg 1454
to top
>gb|AY120756.1| Arabidopsis thaliana type 2A protein serine/threonine phosphatase 55
            kDa B regulatory subunit (At1g51690) mRNA, complete cds
          Length = 2115

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                        
Query: 545  gcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggtgc 604
            ||||| |||||||||||||||||| |||| || || ||||| ||||||||  |||| |||
Sbjct: 1780 gcatagtacatgtacaagctatttgcagcggcgcaagcaattgagttctcgtttggatgc 1721

                                     
Query: 605  cacgcaagatggagtaactttgttg 629
            || |||||||| || | ||||||||
Sbjct: 1720 caagcaagatgcagcagctttgttg 1696
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>gb|AC025294.14|AC025294 Arabidopsis thaliana chromosome 1 BAC F19C24 genomic sequence, complete
             sequence
          Length = 124511

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                         
Query: 545   gcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggtgc 604
             ||||| |||||||||||||||||| |||| || || ||||| ||||||||  |||| |||
Sbjct: 75757 gcatagtacatgtacaagctatttgcagcggcgcaagcaattgagttctcgtttggatgc 75816

                                      
Query: 605   cacgcaagatggagtaactttgttg 629
             || |||||||| || | ||||||||
Sbjct: 75817 caagcaagatgcagcagctttgttg 75841
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>emb|BX816494.1|CNS0AAKJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH51ZE08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2198

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                        
Query: 545  gcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttgggtgc 604
            ||||| |||||||||||||||||| |||| || || ||||| ||||||||  |||| |||
Sbjct: 1758 gcatagtacatgtacaagctatttgcagcggcgcaagcaattgagttctcgtttggatgc 1699

                                     
Query: 605  cacgcaagatggagtaactttgttg 629
            || |||||||| || | ||||||||
Sbjct: 1698 caagcaagatgcagcagctttgttg 1674
to top
>gb|AF196289.1|AF196289 Medicago sativa subsp. x varia Ser/Thr specific protein phosphatase
            2A B regulatory subunit beta isoform mRNA, complete cds
          Length = 2194

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 542  tatgcataatacatgtacaagctatttccagcagcaca 579
            |||||||| |||||||||||||||||| ||||||||||
Sbjct: 1699 tatgcatagtacatgtacaagctatttgcagcagcaca 1662
to top
>ref|XM_463396.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1527

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                        
Query: 542  tatgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttggg 601
            |||||||| |||||||||||||| ||  |||| ||||| |||||  | || || | ||||
Sbjct: 1526 tatgcatagtacatgtacaagctgttcgcagcggcacaagcaattaaattttcggatggg 1467

                                      
Query: 602  tgccacgcaagatggagtaactttgt 627
            ||||| || |||||||| ||||||||
Sbjct: 1466 tgccatgcgagatggagcaactttgt 1441
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>gb|BT018248.1| Zea mays clone EL01N0563E09.c mRNA sequence
          Length = 1398

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                        
Query: 542  tatgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttggg 601
            |||||||| |||||||||||||||||  | |||||||| |||||    || |||| ||||
Sbjct: 1137 tatgcatagtacatgtacaagctattggctgcagcacatgcaattagattttcagatggg 1078

                                      
Query: 602  tgccacgcaagatggagtaactttgt 627
            ||||| || | |||||| ||||||||
Sbjct: 1077 tgccaggccaaatggagcaactttgt 1052
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                            
Query: 542      tatgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttggg 601
                |||||||| |||||||||||||| ||  |||| ||||| |||||  | || || | ||||
Sbjct: 23572208 tatgcatagtacatgtacaagctgttcgcagcggcacaagcaattaaattttcggatggg 23572149

                                          
Query: 602      tgccacgcaagatggagtaactttgt 627
                ||||| || |||||||| ||||||||
Sbjct: 23572148 tgccatgcgagatggagcaactttgt 23572123
to top
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0518F01
          Length = 154541

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                         
Query: 542   tatgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttggg 601
             |||||||| |||||||||||||| ||  |||| ||||| |||||  | || || | ||||
Sbjct: 34907 tatgcatagtacatgtacaagctgttcgcagcggcacaagcaattaaattttcggatggg 34848

                                       
Query: 602   tgccacgcaagatggagtaactttgt 627
             ||||| || |||||||| ||||||||
Sbjct: 34847 tgccatgcgagatggagcaactttgt 34822
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>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0025A05
          Length = 154298

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                          
Query: 542    tatgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttggg 601
              |||||||| |||||||||||||| ||  |||| ||||| |||||  | || || | ||||
Sbjct: 135513 tatgcatagtacatgtacaagctgttcgcagcggcacaagcaattaaattttcggatggg 135454

                                        
Query: 602    tgccacgcaagatggagtaactttgt 627
              ||||| || |||||||| ||||||||
Sbjct: 135453 tgccatgcgagatggagcaactttgt 135428
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>emb|AL031798.1|SPCC576 S.pombe chromosome III cosmid c576
          Length = 35566

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 176   acttgatgaagagaaaagaaaa 197
             ||||||||||||||||||||||
Sbjct: 11206 acttgatgaagagaaaagaaaa 11227
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>ref|NM_001023423.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC576.05),
            partial mRNA
          Length = 3075

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 176  acttgatgaagagaaaagaaaa 197
            ||||||||||||||||||||||
Sbjct: 2472 acttgatgaagagaaaagaaaa 2493
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>gb|AY107929.1| Zea mays PCO096026 mRNA sequence
          Length = 654

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                       
Query: 542 tatgcataatacatgtacaagctatttccagcagcacacgcaatggagttctcagttggg 601
           ||||| || |||||||||||||||||  | |||||||| |||||    || |||| ||||
Sbjct: 208 tatgcgtagtacatgtacaagctattggctgcagcacaagcaattagattttcagatggg 149

                                     
Query: 602 tgccacgcaagatggagtaactttgt 627
           ||||| || | |||||| ||||||||
Sbjct: 148 tgccaggccaaatggagcaactttgt 123
to top
>emb|AJ937769.1| Uncultured epsilon proteobacterium fosmid clone b1dcf1.3.c08
          Length = 38167

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 178  ttgatgaagagaaaagaaaatttctt 203
            |||||||||||| |||||||||||||
Sbjct: 4748 ttgatgaagagacaagaaaatttctt 4723
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>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 613    atggagtaactttgttgagaa 633
              |||||||||||||||||||||
Sbjct: 588368 atggagtaactttgttgagaa 588348
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>emb|AJ347812.1|SPY347812 Streptococcus pyogenes partial sfbI gene for fibronectin-binding
           protein I, strain NS989
          Length = 1542

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 219 agatatttcctgggaccaagtgaaa 243
           ||||||||||||||| |||||||||
Sbjct: 603 agatatttcctgggagcaagtgaaa 627
to top
>emb|AJ347839.1|SPY347839 Streptococcus pyogenes sfbI gene for fibronectin-binding protein I,
           strain NS732
          Length = 1779

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 219 agatatttcctgggaccaagtgaaa 243
           ||||||||||||||| |||||||||
Sbjct: 628 agatatttcctgggagcaagtgaaa 652
to top
>emb|AJ347838.1|SPY347838 Streptococcus pyogenes sfbI gene for fibronectin-binding protein I,
           strain NS731
          Length = 1779

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 219 agatatttcctgggaccaagtgaaa 243
           ||||||||||||||| |||||||||
Sbjct: 628 agatatttcctgggagcaagtgaaa 652
to top
>emb|AJ347837.1|SPY347837 Streptococcus pyogenes sfbI gene for fibronectin-binding protein I,
           strain NS297
          Length = 1751

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 219 agatatttcctgggaccaagtgaaa 243
           ||||||||||||||| |||||||||
Sbjct: 609 agatatttcctgggagcaagtgaaa 633
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>emb|AJ347836.1|SPY347836 Streptococcus pyogenes sfbI gene for fibronectin-binding protein I,
           strain CATHY13
          Length = 1779

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 219 agatatttcctgggaccaagtgaaa 243
           ||||||||||||||| |||||||||
Sbjct: 628 agatatttcctgggagcaagtgaaa 652
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>emb|AJ347835.1|SPY347835 Streptococcus pyogenes sfbI gene for fibronectin-binding protein I,
           strain NS192
          Length = 2044

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 219 agatatttcctgggaccaagtgaaa 243
           ||||||||||||||| |||||||||
Sbjct: 628 agatatttcctgggagcaagtgaaa 652
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>emb|AJ347813.1|SPY347813 Streptococcus pyogenes partial sfbI gene for fibronectin-binding
           protein I, strain NS244
          Length = 1611

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 219 agatatttcctgggaccaagtgaaa 243
           ||||||||||||||| |||||||||
Sbjct: 603 agatatttcctgggagcaagtgaaa 627
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>emb|AJ347811.1|SPY347811 Streptococcus pyogenes partial sfbI gene for fibronectin-binding
           protein I, strain NS755
          Length = 1611

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 219 agatatttcctgggaccaagtgaaa 243
           ||||||||||||||| |||||||||
Sbjct: 603 agatatttcctgggagcaagtgaaa 627
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>emb|AJ347810.1|SPY347810 Streptococcus pyogenes partial sfbI gene for fibronectin-binding
           protein I, strain NS730
          Length = 1623

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 219 agatatttcctgggaccaagtgaaa 243
           ||||||||||||||| |||||||||
Sbjct: 621 agatatttcctgggagcaagtgaaa 645
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>emb|AJ347809.1|SPY347809 Streptococcus pyogenes partial sfbI gene for fibronectin-binding
           protein I, strain NS495
          Length = 1617

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 219 agatatttcctgggaccaagtgaaa 243
           ||||||||||||||| |||||||||
Sbjct: 603 agatatttcctgggagcaagtgaaa 627
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>emb|AJ347808.1|SPY347808 Streptococcus pyogenes partial sfbI gene for fibronectin-binding
           protein I, strain NS179
          Length = 1803

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 219 agatatttcctgggaccaagtgaaa 243
           ||||||||||||||| |||||||||
Sbjct: 603 agatatttcctgggagcaagtgaaa 627
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>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
            OSJNBa0095P22, complete sequence
          Length = 162766

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 177  cttgatgaagagaaaagaaaa 197
            |||||||||||||||||||||
Sbjct: 4103 cttgatgaagagaaaagaaaa 4083
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>gb|AC118346.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
            OSJNBa0039F06, complete sequence
          Length = 133022

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 177  cttgatgaagagaaaagaaaa 197
            |||||||||||||||||||||
Sbjct: 2432 cttgatgaagagaaaagaaaa 2452
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>gb|AC119420.12| Mus musculus strain 129S6/SvEvTac clone rp22-121i21 map 11, complete
             sequence
          Length = 168186

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 453   ttctgcaccatttctctggtt 473
             |||||||||||||||||||||
Sbjct: 74359 ttctgcaccatttctctggtt 74379
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>emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chromosome 11 Contains the
             genes for olfactory receptor MOR135-14 and -3 , two
             olfactory receptor MOR135 pseudogenes, the gene for a
             novel olfactory receptor family MOR135 member, a zinc
             finger protein pseudogene, the 5' end of the gene for a
             novel KRAB box domain containing protein and a CpG island,
             complete sequence
          Length = 194873

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 453   ttctgcaccatttctctggtt 473
             |||||||||||||||||||||
Sbjct: 52224 ttctgcaccatttctctggtt 52204
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>emb|AL611937.6| Mouse DNA sequence from clone RP23-221M24 on chromosome 11 Contains the
             genes for olfactory receptors MOR255-2, -1 and -6, a novel
             KRAB box containing protein, a high mobility group box 1
             (Hmgb1) pseudogene and a olfactory receptor MOR255
             pseudogene, complete sequence
          Length = 109397

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 453   ttctgcaccatttctctggtt 473
             |||||||||||||||||||||
Sbjct: 31503 ttctgcaccatttctctggtt 31483
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>emb|BX511227.7| Zebrafish DNA sequence from clone DKEY-100E19 in linkage group 14,
              complete sequence
          Length = 262038

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 503    cacaaaccaaaaacagtgaatcttc 527
              |||||| ||||||||||||||||||
Sbjct: 234120 cacaaatcaaaaacagtgaatcttc 234144
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>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
          Length = 2694756

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 176    acttgatgaagagaaaagaaa 196
              |||||||||||||||||||||
Sbjct: 588762 acttgatgaagagaaaagaaa 588742
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 177      cttgatgaagagaaaagaaaa 197
                |||||||||||||||||||||
Sbjct: 24202994 cttgatgaagagaaaagaaaa 24202974
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 177     cttgatgaagagaaaagaaaa 197
               |||||||||||||||||||||
Sbjct: 3281634 cttgatgaagagaaaagaaaa 3281614
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>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0029C06
          Length = 156500

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 177    cttgatgaagagaaaagaaaa 197
              |||||||||||||||||||||
Sbjct: 122341 cttgatgaagagaaaagaaaa 122321
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>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0556B08
          Length = 136775

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 177   cttgatgaagagaaaagaaaa 197
             |||||||||||||||||||||
Sbjct: 13930 cttgatgaagagaaaagaaaa 13910
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>dbj|AP005892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0011D16
          Length = 177329

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 177    cttgatgaagagaaaagaaaa 197
              |||||||||||||||||||||
Sbjct: 157947 cttgatgaagagaaaagaaaa 157927
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 177      cttgatgaagagaaaagaaaa 197
                |||||||||||||||||||||
Sbjct: 24514663 cttgatgaagagaaaagaaaa 24514643
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>gb|AE014828.1| Plasmodium falciparum 3D7 chromosome 14 section 13 of 13 of the
             complete sequence
          Length = 273275

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   taaagaatcagaaggaaata 366
             ||||||||||||||||||||
Sbjct: 83160 taaagaatcagaaggaaata 83141
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>gb|AC167711.1| Medicago truncatula chromosome 7 BAC clone mth2-167p21, complete
            sequence
          Length = 132340

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 178  ttgatgaagagaaaagaaaa 197
            ||||||||||||||||||||
Sbjct: 4801 ttgatgaagagaaaagaaaa 4820
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>gb|AC125543.3| Mus musculus BAC clone RP23-360H5 from chromosome 12, complete sequence
          Length = 184081

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 552   acatgtacaagctatttcca 571
             ||||||||||||||||||||
Sbjct: 65564 acatgtacaagctatttcca 65545
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>gb|AC122847.4| Mus musculus BAC clone RP23-163F2 from 6, complete sequence
          Length = 193343

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 187   agaaaagaaaatttcttacatcca 210
             ||||||||||||||||| ||||||
Sbjct: 61205 agaaaagaaaatttctttcatcca 61182
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>gb|AC165350.3| Mus musculus BAC clone RP23-249A17 from chromosome 12, complete sequence
          Length = 227048

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 552    acatgtacaagctatttcca 571
              ||||||||||||||||||||
Sbjct: 186907 acatgtacaagctatttcca 186926
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>gb|AC142284.1| Pan troglodytes BAC clone RP43-163P11 from 7, complete sequence
          Length = 171686

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 341    atttactaaagaatcagaag 360
              ||||||||||||||||||||
Sbjct: 105432 atttactaaagaatcagaag 105451
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>emb|AL035251.11|HS705O1 Human DNA sequence from clone RP4-705O1 on chromosome 20q11.2 Contains
             a novel gene, complete sequence
          Length = 161888

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   gatgaagagaaaagaaaatt 199
             ||||||||||||||||||||
Sbjct: 20896 gatgaagagaaaagaaaatt 20915
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>emb|AL138659.1|ATT16L24 Arabidopsis thaliana DNA chromosome 3, BAC clone T16L24
          Length = 91851

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   atgaagagaaaagaaaattt 200
             ||||||||||||||||||||
Sbjct: 42360 atgaagagaaaagaaaattt 42341
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>emb|AL671560.7| Mouse DNA sequence from clone RP23-149A5 on chromosome 1 Contains the 3'
              end of the Nrp2 gene for neuropilin 2, complete sequence
          Length = 157987

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    atgaagagaaaagaaaattt 200
              ||||||||||||||||||||
Sbjct: 151125 atgaagagaaaagaaaattt 151106
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>gb|AC023385.10| Homo sapiens chromosome 8, clone RP11-675P19, complete sequence
          Length = 167118

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 182    tgaagagaaaagaaaatttcttac 205
              ||||||||||| ||||||||||||
Sbjct: 133841 tgaagagaaaaaaaaatttcttac 133818
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>gb|AC024109.18| Homo sapiens 3 BAC RP11-32F4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 116166

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 440   attgatgacaatgttctgcaccat 463
             ||||||| ||||||||||||||||
Sbjct: 73269 attgatggcaatgttctgcaccat 73292
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>gb|AC079200.6| Homo sapiens chromosome 8, clone RP11-1058B24, complete sequence
          Length = 117978

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 182    tgaagagaaaagaaaatttcttac 205
              ||||||||||| ||||||||||||
Sbjct: 104296 tgaagagaaaaaaaaatttcttac 104319
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>gb|AC007923.7| Homo sapiens chromosome 17, clone RP11-805L22, complete sequence
          Length = 180270

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    aatttgtgtttcacatttac 346
              ||||||||||||||||||||
Sbjct: 158575 aatttgtgtttcacatttac 158594
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>gb|AC080009.13| Homo sapiens 3q BAC RP11-460M17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163469

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    gatgaagagaaaagaaaatt 199
              ||||||||||||||||||||
Sbjct: 132009 gatgaagagaaaagaaaatt 132028
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>gb|AC004886.1| Homo sapiens PAC clone RP4-784G16 from 7, complete sequence
          Length = 143364

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 341    atttactaaagaatcagaag 360
              ||||||||||||||||||||
Sbjct: 126928 atttactaaagaatcagaag 126947
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>gb|AY958432.1| Homo sapiens methionine sulfoxide reductase gene, complete cds,
              alternatively spliced
          Length = 379048

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 182    tgaagagaaaagaaaatttcttac 205
              ||||||||||| ||||||||||||
Sbjct: 129720 tgaagagaaaaaaaaatttcttac 129697
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>gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome 14, complete sequence
          Length = 199716

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   gatgaagagaaaagaaaatt 199
             ||||||||||||||||||||
Sbjct: 35138 gatgaagagaaaagaaaatt 35157
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>gb|AC006423.7|AC006423 Arabidopsis thaliana chromosome I BAC F28H19 genomic sequence, complete
              sequence
          Length = 131692

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    gatgaagagaaaagaaaatt 199
              ||||||||||||||||||||
Sbjct: 113979 gatgaagagaaaagaaaatt 113960
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>gb|AC134462.5| Mus musculus BAC clone RP23-391L12 from chromosome 12, complete sequence
          Length = 197870

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 552    acatgtacaagctatttcca 571
              ||||||||||||||||||||
Sbjct: 145403 acatgtacaagctatttcca 145422
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>gb|AC174768.1| Gasterosteus aculeatus clone VMRC28-49C14, complete sequence
          Length = 142399

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 451    tgttctgcaccatttctctg 470
              ||||||||||||||||||||
Sbjct: 139075 tgttctgcaccatttctctg 139094
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>gb|AC130824.4| Mus musculus BAC clone RP23-349B5 from 12, complete sequence
          Length = 178133

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 552    acatgtacaagctatttcca 571
              ||||||||||||||||||||
Sbjct: 103186 acatgtacaagctatttcca 103205


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,474,525
Number of Sequences: 3902068
Number of extensions: 6474525
Number of successful extensions: 189330
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 188816
Number of HSP's gapped (non-prelim): 510
length of query: 634
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 611
effective length of database: 17,143,297,704
effective search space: 10474554897144
effective search space used: 10474554897144
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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