ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags7c05 |
|---|---|
| Clone Library Name | barley_pub |
>BI1_ORYSA (Q9MBD8) Bax inhibitor 1 (BI-1) (OsBI-1)| Length = 249 Score = 176 bits (445), Expect = 6e-44 Identities = 88/113 (77%), Positives = 94/113 (83%) Frame = -2 Query: 616 AFGCFSGAAIIAKRREYXXXXXXXXXXXXXXXXLQFATSIFGHSSGSFMFEVYFGLLIFL 437 AFGCF+ AAI+AKRREY LQFA SIFGHS+GSFMFEVYFGLLIFL Sbjct: 130 AFGCFTCAAIVAKRREYLYLGGLLSSGLSILLWLQFAASIFGHSTGSFMFEVYFGLLIFL 189 Query: 436 GYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSED 278 GYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVR+L+IMLKNA DKSE+ Sbjct: 190 GYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRILVIMLKNASDKSEE 242
>BI1_ARATH (Q9LD45) Bax inhibitor 1 (BI-1) (AtBI-1)| Length = 247 Score = 144 bits (364), Expect = 2e-34 Identities = 73/112 (65%), Positives = 85/112 (75%) Frame = -2 Query: 616 AFGCFSGAAIIAKRREYXXXXXXXXXXXXXXXXLQFATSIFGHSSGSFMFEVYFGLLIFL 437 AF CFS AA++A+RREY LQFA+SIFG S+ F FE+YFGLLIF+ Sbjct: 129 AFVCFSAAAMLARRREYLYLGGLLSSGLSMLMWLQFASSIFGGSASIFKFELYFGLLIFV 188 Query: 436 GYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSE 281 GYMV DTQEIIE+AH GDMDY+KH+LTLFTDFVAV VR+LIIMLKN+ DK E Sbjct: 189 GYMVVDTQEIIEKAHLGDMDYVKHSLTLFTDFVAVFVRILIIMLKNSADKEE 240
>BI1_RAT (P55062) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 80.1 bits (196), Expect = 5e-15 Identities = 41/112 (36%), Positives = 60/112 (53%) Frame = -2 Query: 613 FGCFSGAAIIAKRREYXXXXXXXXXXXXXXXXLQFATSIFGHSSGSFMFEVYFGLLIFLG 434 F CFS +A+ A+RR Y FG S F +Y GLL+ G Sbjct: 125 FTCFSLSALYARRRSYLFLGGILMSAMSLMFVSSLGNLFFG-SIWLFQANLYMGLLVMCG 183 Query: 433 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSED 278 ++++DTQ IIE+A HGD DYI H + LF DFV + ++++I+ N DK ++ Sbjct: 184 FVLFDTQLIIEKAEHGDKDYIWHCIDLFLDFVTLFRKLMLILAFNEKDKKKE 235
>BI1_MOUSE (Q9D2C7) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 79.7 bits (195), Expect = 6e-15 Identities = 41/112 (36%), Positives = 60/112 (53%) Frame = -2 Query: 613 FGCFSGAAIIAKRREYXXXXXXXXXXXXXXXXLQFATSIFGHSSGSFMFEVYFGLLIFLG 434 F CFS +A+ A+RR Y FG S F +Y GLL+ G Sbjct: 125 FTCFSLSALYARRRSYLFLGGILMSAMSLMLLSSLGNLFFG-SIWLFQANLYLGLLVMCG 183 Query: 433 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSED 278 ++++DTQ IIE+A HGD DYI H + LF DFV + ++++I+ N DK ++ Sbjct: 184 FVLFDTQLIIEKAEHGDKDYIWHCVDLFLDFVTLFRKLMLILAFNEKDKKKE 235
>BI1_HUMAN (P55061) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| (Transmembrane BAX inhibitor motif-containing protein 6) Length = 237 Score = 79.0 bits (193), Expect = 1e-14 Identities = 39/112 (34%), Positives = 60/112 (53%) Frame = -2 Query: 613 FGCFSGAAIIAKRREYXXXXXXXXXXXXXXXXLQFATSIFGHSSGSFMFEVYFGLLIFLG 434 F CF+ +A+ A+RR Y FG S F +Y GL++ G Sbjct: 125 FTCFTLSALYARRRSYLFLGGILMSALSLLLLSSLGNVFFG-SIWLFQANLYVGLVVMCG 183 Query: 433 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSED 278 ++++DTQ IIE+A HGD DYI H + LF DF+ V ++++I+ N DK ++ Sbjct: 184 FVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITVFRKLMMILAMNEKDKKKE 235
>BI1_PONPY (Q5R7R1) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 77.8 bits (190), Expect = 2e-14 Identities = 38/112 (33%), Positives = 60/112 (53%) Frame = -2 Query: 613 FGCFSGAAIIAKRREYXXXXXXXXXXXXXXXXLQFATSIFGHSSGSFMFEVYFGLLIFLG 434 F CF+ +A+ A+RR Y FG S F +Y GL++ G Sbjct: 125 FTCFTLSALYARRRSYLFLGGILMSALSLLLLSSLGNVFFG-SIWLFQANLYVGLVVMCG 183 Query: 433 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSED 278 ++++DTQ IIE+A HGD DYI H + LF DF+ + ++++I+ N DK ++ Sbjct: 184 FVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITLFRKLMMILAMNEKDKKKE 235
>BI1_PIG (Q66RM2) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 75.5 bits (184), Expect = 1e-13 Identities = 38/112 (33%), Positives = 61/112 (54%) Frame = -2 Query: 613 FGCFSGAAIIAKRREYXXXXXXXXXXXXXXXXLQFATSIFGHSSGSFMFEVYFGLLIFLG 434 F CF+ +A+ A+RR Y FG S F +Y GL++ G Sbjct: 125 FTCFTLSALYARRRSYLFLGGILMSAMSLMVLSSLGNLFFG-SIWLFQANLYVGLVVMCG 183 Query: 433 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSED 278 ++++DTQ IIE+A +GD DYI H + LF+DFV + ++++I+ N DK ++ Sbjct: 184 FVLFDTQLIIEKAENGDKDYIWHCVDLFSDFVTLFRKLMMILAMNEKDKKKE 235
>BI1_PAROL (Q9IA79) Probable Bax inhibitor 1 (BI-1)| Length = 237 Score = 75.1 bits (183), Expect = 2e-13 Identities = 39/112 (34%), Positives = 61/112 (54%) Frame = -2 Query: 613 FGCFSGAAIIAKRREYXXXXXXXXXXXXXXXXLQFATSIFGHSSGSFMFEVYFGLLIFLG 434 F CF+ +A+ AKRR Y + FG S F +Y GLLI G Sbjct: 125 FVCFTLSALYAKRRSYLFLGGTLMSGLSILFLMSMMNMFFG-SVMLFKAHMYLGLLIMCG 183 Query: 433 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDKSED 278 +++ DTQ IIE+A +GD DY+ H++ LF DF+ + ++++I+ N DK ++ Sbjct: 184 FVLXDTQLIIEKAENGDKDYVWHSVDLFLDFITIFRKLMVILALNDKDKKKE 235
>BI1_DROME (Q9VSH3) Probable Bax inhibitor 1 (BI-1)| Length = 245 Score = 54.3 bits (129), Expect = 3e-07 Identities = 22/63 (34%), Positives = 41/63 (65%) Frame = -2 Query: 466 EVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDK 287 ++Y G+ + ++VYDTQ I+E+ +G+ D ++HAL LF D +++ R+LII+ + K Sbjct: 176 QLYVGVFVMAAFIVYDTQNIVEKCRNGNRDVVQHALDLFFDVLSMFRRLLIILTQKEERK 235 Query: 286 SED 278 + Sbjct: 236 QNE 238
>TMBI1_HUMAN (Q969X1) Transmembrane BAX inhibitor motif-containing protein 1| (RECS1 protein homolog) Length = 311 Score = 33.9 bits (76), Expect = 0.39 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = -2 Query: 472 MFEVYFGLLIFLGYMVYDTQEIIERAHH--GDMDYIKHALTLFTDFVAVLVRVLIIM 308 M G + F ++ YDTQ ++ H DYI AL ++TD + + VL +M Sbjct: 251 MLYAALGAICFTLFLAYDTQLVLGNRKHTISPEDYITGALQIYTDIIYIFTFVLQLM 307
>TMBI1_MOUSE (Q8BJZ3) Transmembrane BAX inhibitor motif-containing protein 1| (RECS1 protein) (Responsive to centrifugal force and shear stress gene 1 protein) Length = 309 Score = 32.7 bits (73), Expect = 0.87 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Frame = -2 Query: 499 IFGHSSGSFMFEVYFGLLIFLGYMVYDTQEIIERAHH--GDMDYIKHALTLFTDFVAVLV 326 IF + M G + F ++ YDTQ ++ H DYI AL ++TD V + Sbjct: 240 IFKYIYWLHMVYAALGAICFTLFLAYDTQLVLGNRKHTISPEDYITGALQIYTDIVYIFT 299 Query: 325 RVL 317 VL Sbjct: 300 FVL 302
>TMBI4_MOUSE (Q9DA39) Transmembrane BAX inhibitor motif-containing protein 4| (Z-protein) Length = 238 Score = 32.7 bits (73), Expect = 0.87 Identities = 15/61 (24%), Positives = 33/61 (54%) Frame = -2 Query: 499 IFGHSSGSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRV 320 +F +S + G L+F G+++YDT ++ R +Y+ A++L+ D + + + + Sbjct: 171 LFFYSETMELVLASLGALLFCGFIIYDTHSLMHRL--SPEEYVIAAISLYMDIINLFLHL 228 Query: 319 L 317 L Sbjct: 229 L 229
>JHD3B_HUMAN (O94953) JmjC domain-containing histone demethylation protein 3B| (EC 1.14.11.-) (Jumonji domain-containing protein 2B) Length = 1096 Score = 32.0 bits (71), Expect = 1.5 Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Frame = +2 Query: 434 PQEDQQAKVNLKH-EAARGVAKDGRGKLQPEQDRQARREQA 553 P+E+++ L H A G +DGRGKL+P + + R++++ Sbjct: 418 PEEEEEEPQPLPHGREAEGAEEDGRGKLRPTKAKSERKKKS 458
>YN45_YEAST (P48558) Hypothetical 33.6 kDa protein in MCK1-RPS19B intergenic| region Length = 297 Score = 31.6 bits (70), Expect = 1.9 Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 3/73 (4%) Frame = -2 Query: 499 IFGHSSGSFMFEVYFGLL---IFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVL 329 +FG ++ S F + +G L +F Y+ DTQ I + + + ++ A+ L+ D V + Sbjct: 226 LFGWNTHSSKFNLLYGWLGAILFTAYLFIDTQLIFRKVYPD--EEVRCAMMLYLDIVNLF 283 Query: 328 VRVLIIMLKNAGD 290 + +L I+ + D Sbjct: 284 LSILRILANSNDD 296
>TMBI4_HUMAN (Q9HC24) Transmembrane BAX inhibitor motif-containing protein 4| (Z-protein) (S1R protein) Length = 238 Score = 31.6 bits (70), Expect = 1.9 Identities = 12/46 (26%), Positives = 28/46 (60%) Frame = -2 Query: 454 GLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVL 317 G L+F G+++YDT ++ + +Y+ A++L+ D + + + +L Sbjct: 186 GALLFCGFIIYDTHSLMHKL--SPEEYVLAAISLYLDIINLFLHLL 229
>YBHL_ECOLI (P0AAC4) Inner membrane protein ybhL| Length = 234 Score = 31.6 bits (70), Expect = 1.9 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 9/71 (12%) Frame = -2 Query: 496 FGHSSGSFMFEV-YFGLLIFLGYMVYDTQEIIERAHHGDMD--------YIKHALTLFTD 344 F S + M+ V Y G+++F+G YDTQ++ D I ALTL+ D Sbjct: 159 FWLKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLD 218 Query: 343 FVAVLVRVLII 311 F+ + + +L I Sbjct: 219 FINLFLMLLRI 229
>YBHL_ECOL6 (P0AAC5) Inner membrane protein ybhL| Length = 234 Score = 31.6 bits (70), Expect = 1.9 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 9/71 (12%) Frame = -2 Query: 496 FGHSSGSFMFEV-YFGLLIFLGYMVYDTQEIIERAHHGDMD--------YIKHALTLFTD 344 F S + M+ V Y G+++F+G YDTQ++ D I ALTL+ D Sbjct: 159 FWLKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLD 218 Query: 343 FVAVLVRVLII 311 F+ + + +L I Sbjct: 219 FINLFLMLLRI 229
>CEMA_CHAGL (Q8M9X3) Chloroplast envelope membrane protein| Length = 472 Score = 30.8 bits (68), Expect = 3.3 Identities = 15/45 (33%), Positives = 28/45 (62%) Frame = -2 Query: 439 LGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIML 305 LG +++ Q I+ A + + D I L LFTDF+A+ +++++L Sbjct: 327 LGALIH--QRTIQLAEYYNQDSINIILHLFTDFIAIFTLIVLLIL 369
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 30.4 bits (67), Expect = 4.3 Identities = 14/37 (37%), Positives = 14/37 (37%) Frame = -1 Query: 419 HAGDHREGAPWRHGLHQARPHPLHRLCCRPRPSPHHH 309 H G H AP H H PH H P HHH Sbjct: 165 HLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 201 Score = 29.3 bits (64), Expect = 9.7 Identities = 14/41 (34%), Positives = 14/41 (34%) Frame = -1 Query: 431 HGVRHAGDHREGAPWRHGLHQARPHPLHRLCCRPRPSPHHH 309 H H H AP H H PH H P HHH Sbjct: 181 HHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 221 Score = 29.3 bits (64), Expect = 9.7 Identities = 14/41 (34%), Positives = 14/41 (34%) Frame = -1 Query: 431 HGVRHAGDHREGAPWRHGLHQARPHPLHRLCCRPRPSPHHH 309 H H H AP H H PH H P HHH Sbjct: 171 HHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 211
>CITE2_HUMAN (Q99967) Cbp/p300-interacting transactivator 2 (MSG-related protein| 1) (MRG-1) (P35srj) Length = 270 Score = 30.0 bits (66), Expect = 5.7 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -1 Query: 383 HGLHQARPHPLHRLCCRPRPSPHHH 309 +GLH HP HR+ PSPHHH Sbjct: 18 NGLHH---HPAHRMGMGQFPSPHHH 39
>Y206_CHLMU (Q9PLA1) Hypothetical protein TC0206| Length = 238 Score = 30.0 bits (66), Expect = 5.7 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Frame = -2 Query: 502 SIFGHSSGSFMFEVYFGLLIFLGYMVYDTQEIIERAH----HGDMDY 374 S+F ++ Y GL+IF+G V D Q I A HGD+ Y Sbjct: 160 SLFTPMPLMYLLICYLGLIIFVGLTVVDAQSIRRVARSVGDHGDLSY 206
>CITE2_MOUSE (O35740) Cbp/p300-interacting transactivator 2 (MSG-related protein| 1) (MRG-1) Length = 269 Score = 30.0 bits (66), Expect = 5.7 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -1 Query: 383 HGLHQARPHPLHRLCCRPRPSPHHH 309 +GLH HP HR+ PSPHHH Sbjct: 18 NGLHH---HPAHRMGMGQFPSPHHH 39
>MAP4_HUMAN (P27816) Microtubule-associated protein 4 (MAP 4)| Length = 1152 Score = 29.6 bits (65), Expect = 7.4 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Frame = +2 Query: 452 AKVNLKHEAARGVAKDGRGKLQPEQDRQARREQATEVQVLPALG---DDGGAREAP 610 +K N+KH+ G K KL ++ QA+ V LPA G +GG EAP Sbjct: 1041 SKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAGGAVKTEGGGSEAP 1096
>MAP4_BOVIN (P36225) Microtubule-associated protein 4 (MAP 4)| (Microtubule-associated protein-U) (MAP-U) Length = 1072 Score = 29.6 bits (65), Expect = 7.4 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Frame = +2 Query: 452 AKVNLKHEAARGVAKDGRGKLQPEQDRQARREQATEVQVLPALG---DDGGAREAP 610 +K N+KH+ G K KL ++ QA+ V LPA G +GG EAP Sbjct: 956 SKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAGGAVKTEGGGSEAP 1011
>Y819_CHLTR (O84826) Hypothetical protein CT_819| Length = 238 Score = 29.6 bits (65), Expect = 7.4 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 4/38 (10%) Frame = -2 Query: 475 FMFEVYFGLLIFLGYMVYDTQEIIERAH----HGDMDY 374 ++ Y GL+IF+G V D Q I A HGD+ Y Sbjct: 169 YLLICYLGLIIFVGLTVVDAQSIRRVARSVGDHGDLSY 206 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,285,513 Number of Sequences: 219361 Number of extensions: 1219775 Number of successful extensions: 4006 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 3813 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3989 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
