Clone Information

BLAST Search Result

Clone Name	rbags7c02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	DRP1C_ARATH (Q8LF21) Dynamin-related protein 1C (Dynamin-like pr...	144	1e-34
2	DRP1A_ARATH (P42697) Dynamin-related protein 1A (Dynamin-like pr...	125	9e-29
3	DRP1E_ARATH (Q9FNX5) Dynamin-related protein 1E (Dynamin-like pr...	124	2e-28
4	DRP1B_ARATH (Q84XF3) Dynamin-related protein 1B (Dynamin-like pr...	120	2e-27
5	DRP1D_ARATH (Q8S3C9) Dynamin-related protein 1D (Dynamin-like pr...	115	7e-26
6	DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related pr...	53	4e-07
7	DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related pr...	53	6e-07
8	DYN2_RAT (P39052) Dynamin-2 (EC 3.6.5.5)	39	0.008
9	DYN2_MOUSE (P39054) Dynamin-2 (EC 3.6.5.5) (Dynamin UDNM)	39	0.008
10	DYN2_HUMAN (P50570) Dynamin-2 (EC 3.6.5.5)	39	0.011
11	DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular)...	38	0.019
12	DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5)	37	0.025
13	DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (...	37	0.042
14	DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)	36	0.071
15	DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain)...	35	0.093
16	DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)	35	0.093
17	DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like pr...	35	0.16
18	YB68_SCHPO (Q09748) Dynamin-like protein C12C2.08	35	0.16
19	COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor	35	0.16
20	DRP3B_ARATH (Q8LFT2) Dynamin-related protein 3B (Dynamin-like pr...	34	0.27
21	DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)	33	0.35
22	SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)	33	0.35
23	WOX3A_MAIZE (Q70UV1) WUSCHEL-related homeobox 3A (Narrow sheath ...	33	0.60
24	VPS1_YEAST (P21576) Vacuolar sorting protein 1	33	0.60
25	COEA1_HUMAN (Q05707) Collagen alpha-1(XIV) chain precursor (Undu...	32	0.79
26	WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel s...	32	1.0
27	CUTL2_MOUSE (P70298) Homeobox protein cut-like 2 (Homeobox prote...	32	1.3
28	CN044_MOUSE (Q8CB59) Protein C14orf44 homolog	32	1.3
29	MAN1_YEAST (P22855) Alpha-mannosidase (EC 3.2.1.24) (Alpha-D-man...	32	1.3
30	PHLPP_RAT (Q9WTR8) PH domain leucine-rich repeat protein phospha...	32	1.3
31	WOX3B_MAIZE (Q6S3I3) WUSCHEL-related homeobox 3B (Narrow sheath ...	31	1.8
32	SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (S...	31	2.3
33	EXOF_RHIME (Q02728) Exopolysaccharide production protein exoF pr...	31	2.3
34	COEA1_CHICK (P32018) Collagen alpha-1(XIV) chain precursor (Undu...	30	3.0
35	K0182_HUMAN (Q14687) Protein KIAA0182 (Fragment)	30	3.0
36	DOCK4_MOUSE (P59764) Dedicator of cytokinesis protein 4	30	3.0
37	DOCK4_HUMAN (Q8N1I0) Dedicator of cytokinesis protein 4	30	3.0
38	SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Sp...	30	3.9
39	K0179_HUMAN (Q14684) Protein KIAA0179	30	3.9
40	SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains prote...	30	3.9
41	CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-ch...	30	3.9
42	OVO_DROME (P51521) Protein ovo (Protein shaven baby)	30	3.9
43	IF140_HUMAN (Q96RY7) Intraflagellar transport 140 homolog (WD an...	30	3.9
44	DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)	30	3.9
45	PDX1_NEUCR (Q9C1K6) Probable pyridoxin biosynthesis protein pdx-1	30	5.1
46	DNM1L_RAT (O35303) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-...	29	6.7
47	DNM1L_MOUSE (Q8K1M6) Dynamin-1-like protein (EC 3.6.5.5) (Dynami...	29	6.7
48	DNM1L_HUMAN (O00429) Dynamin-1-like protein (EC 3.6.5.5) (Dynami...	29	6.7
49	DHE4_CHLSO (P28998) NADP-specific glutamate dehydrogenase (EC 1....	29	8.7
50	GAS3_YEAST (Q03655) Glycolipid-anchored surface protein 3 precursor	29	8.7
51	YKP4_KLULA (P05470) Hypothetical killer plasmid pGKL-2 protein 4...	29	8.7
52	NEBU_HUMAN (P20929) Nebulin	29	8.7

>DRP1C_ARATH (Q8LF21) Dynamin-related protein 1C (Dynamin-like protein C)|
           (Dynamin-like protein 5) (Dynamin-like protein DLP1)
          Length = 614

 Score =  144 bits (364), Expect = 1e-34
 Identities = 68/91 (74%), Positives = 83/91 (91%)
 Frame = -2

Query: 515 RRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDE 336
           R+IGSNVS+YINMVCDTLRN++PKAVV+CQV+EAKR+LLN FYA VG KEK++L AMLDE
Sbjct: 524 RKIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAMLDE 583

Query: 335 DPALMEKRDSLVKKLELYKSARNEIDSVAWK 243
           DP LME+R +L K+LELYK AR++ID+VAWK
Sbjct: 584 DPQLMERRGTLAKRLELYKQARDDIDAVAWK 614

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>DRP1A_ARATH (P42697) Dynamin-related protein 1A (Dynamin-like protein A)|
           (Dynamin-like protein 1)
          Length = 610

 Score =  125 bits (313), Expect = 9e-29
 Identities = 55/90 (61%), Positives = 81/90 (90%)
 Frame = -2

Query: 515 RRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDE 336
           RRIGSNV SY+NMVC  LRN+IPK++V+CQV+EAKR+LL+ F+A +G+ + K+LS++L+E
Sbjct: 519 RRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDHFFAELGTMDMKRLSSLLNE 578

Query: 335 DPALMEKRDSLVKKLELYKSARNEIDSVAW 246
           DPA+ME+R ++ K+LELY++A++EID+VAW
Sbjct: 579 DPAIMERRSAISKRLELYRAAQSEIDAVAW 608

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>DRP1E_ARATH (Q9FNX5) Dynamin-related protein 1E (Dynamin-like protein E)|
           (Dynamin-like protein 4) (Dynamin-like protein DLP2)
          Length = 624

 Score =  124 bits (311), Expect = 2e-28
 Identities = 59/90 (65%), Positives = 73/90 (81%)
 Frame = -2

Query: 515 RRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDE 336
           RRI SNVS+Y+NMV DTLRNTIPKA V+CQV++AK  LLN FY+ +  +E KQL  +LDE
Sbjct: 533 RRIASNVSAYVNMVSDTLRNTIPKACVYCQVRQAKLALLNYFYSQISKREGKQLGQLLDE 592

Query: 335 DPALMEKRDSLVKKLELYKSARNEIDSVAW 246
           DPALM++R    K+LELYK AR+EID+VAW
Sbjct: 593 DPALMDRRLECAKRLELYKKARDEIDAVAW 622

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>DRP1B_ARATH (Q84XF3) Dynamin-related protein 1B (Dynamin-like protein B)|
          Length = 610

 Score =  120 bits (302), Expect = 2e-27
 Identities = 54/90 (60%), Positives = 76/90 (84%)
 Frame = -2

Query: 515 RRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDE 336
           RRIGSNV SY+NMVC  LRN+IPK++V+CQV+EAKR+LL+ F+  +G KE  +LS +LDE
Sbjct: 519 RRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLDE 578

Query: 335 DPALMEKRDSLVKKLELYKSARNEIDSVAW 246
           DPA+ ++R S+ K+LELY+SA+ +I++VAW
Sbjct: 579 DPAVQQRRTSIAKRLELYRSAQTDIEAVAW 608

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>DRP1D_ARATH (Q8S3C9) Dynamin-related protein 1D (Dynamin-like protein D)|
           (Dynamin-like protein DLP3)
          Length = 612

 Score =  115 bits (288), Expect = 7e-26
 Identities = 54/90 (60%), Positives = 70/90 (77%)
 Frame = -2

Query: 515 RRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDE 336
           R+I SNV++YI MV +TL NTIPKAVVHCQV++AK +LLN FYA +   + K+L  +LDE
Sbjct: 521 RKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQLLDE 580

Query: 335 DPALMEKRDSLVKKLELYKSARNEIDSVAW 246
           +PALME+R    K+LELYK AR+EID+  W
Sbjct: 581 NPALMERRMQCAKRLELYKKARDEIDAAVW 610

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>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)|
           (Dynamin-like protein 3)
          Length = 920

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 23/85 (27%), Positives = 48/85 (56%)
 Frame = -2

Query: 515 RRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDE 336
           R +   V  Y+  V ++L   +PKAVV CQV+++K ++LN+ Y+ + +   +++ +++ E
Sbjct: 738 RWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSISAIGNERIESLIQE 797

Query: 335 DPALMEKRDSLVKKLELYKSARNEI 261
           D  +  +RD   K+  L      ++
Sbjct: 798 DQNVKRRRDRYQKQSSLLSKLTRQL 822

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>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)|
           (Dynamin-like protein 6)
          Length = 914

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 23/85 (27%), Positives = 48/85 (56%)
 Frame = -2

Query: 515 RRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDE 336
           R +   V  Y+  V ++L   +PKAVV CQV++AK ++LN+ Y+ + +   +++ +++ E
Sbjct: 731 RWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAIGNERIESLIQE 790

Query: 335 DPALMEKRDSLVKKLELYKSARNEI 261
           D  +  +R+   K+  L      ++
Sbjct: 791 DQNVKRRRERYQKQSSLLSKLTRQL 815

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>DYN2_RAT (P39052) Dynamin-2 (EC 3.6.5.5)|
          Length = 870

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 18/83 (21%), Positives = 44/83 (53%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 318
           V SY+ ++  ++R+ +PK ++H  +   K  + +   A++ S   +  S++++E     +
Sbjct: 660 VDSYVAIINKSIRDLMPKTIMHLMINNTKAFIHHELLAYLYSSADQ--SSLMEESAEQAQ 717

Query: 317 KRDSLVKKLELYKSARNEIDSVA 249
           +RD +++     K A N I  ++
Sbjct: 718 RRDDMLRMYHALKEALNIIGDIS 740

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>DYN2_MOUSE (P39054) Dynamin-2 (EC 3.6.5.5) (Dynamin UDNM)|
          Length = 870

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 18/83 (21%), Positives = 44/83 (53%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 318
           V SY+ ++  ++R+ +PK ++H  +   K  + +   A++ S   +  S++++E     +
Sbjct: 660 VDSYVAIINKSIRDLMPKTIMHLMINNTKAFIHHELLAYLYSSADQ--SSLMEESAEQAQ 717

Query: 317 KRDSLVKKLELYKSARNEIDSVA 249
           +RD +++     K A N I  ++
Sbjct: 718 RRDDMLRMYHALKEALNIIGDIS 740

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>DYN2_HUMAN (P50570) Dynamin-2 (EC 3.6.5.5)|
          Length = 870

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 18/83 (21%), Positives = 44/83 (53%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 318
           V SY+ ++  ++R+ +PK ++H  +   K  + +   A++ S   +  S++++E     +
Sbjct: 660 VDSYVAIINKSIRDLMPKTIMHLMINNTKAFIHHELLAYLYSSADQ--SSLMEESADQAQ 717

Query: 317 KRDSLVKKLELYKSARNEIDSVA 249
           +RD +++     K A N I  ++
Sbjct: 718 RRDDMLRMYHALKEALNIIGDIS 740

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>DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)|
          Length = 859

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 18/83 (21%), Positives = 43/83 (51%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 318
           V SY++++   +R+ IPK ++H  +   K  + +   A + S E +  + +++E     +
Sbjct: 656 VDSYMSIINKCIRDLIPKTIMHLMINNVKDFINSELLAQLYSSEDQ--NTLMEESAEQAQ 713

Query: 317 KRDSLVKKLELYKSARNEIDSVA 249
           +RD +++  +  K A   I  ++
Sbjct: 714 RRDEMLRMYQALKEALGIIGDIS 736

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>DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5)|
          Length = 830

 Score = 37.4 bits (85), Expect = 0.025
 Identities = 20/82 (24%), Positives = 41/82 (50%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 318
           V SY+ ++  T+++ +PKAV+H  V +    + +   AH+   +     A+++E     +
Sbjct: 660 VDSYMRIITKTIKDLVPKAVMHLIVNQTGEFMKDELLAHL--YQCGDTDALMEESQIEAQ 717

Query: 317 KRDSLVKKLELYKSARNEIDSV 252
           KR+ +++     K A   I  V
Sbjct: 718 KREEMLRMYHACKEALRIISEV 739

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>DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)|
          Length = 848

 Score = 36.6 bits (83), Expect = 0.042
 Identities = 17/75 (22%), Positives = 40/75 (53%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 318
           V SY++++   +R+ IPK ++H  +   K  + +   A + S E +  + +++E     +
Sbjct: 656 VDSYMSIINKCIRDLIPKTIMHLMINNVKDFINSELLAQLYSSEDQ--NTLMEESVEQAQ 713

Query: 317 KRDSLVKKLELYKSA 273
           +RD +++  +  K A
Sbjct: 714 RRDEMLRMYQALKEA 728

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>DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)|
          Length = 864

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 18/82 (21%), Positives = 43/82 (52%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 318
           V SY+ +V  T+R+ +PK ++H  +   K  + +   A++ S   +  + +++E     +
Sbjct: 666 VDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYSCGDQ--NTLMEESAEQAQ 723

Query: 317 KRDSLVKKLELYKSARNEIDSV 252
           +RD +++     K A + I ++
Sbjct: 724 RRDEMLRMYHALKEALSIIGNI 745

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>DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain) (B-dynamin)|
          Length = 851

 Score = 35.4 bits (80), Expect = 0.093
 Identities = 18/82 (21%), Positives = 42/82 (51%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 318
           V SY+ +V  T+R+ +PK ++H  +   K  + +   A++ S   +  + +++E     +
Sbjct: 666 VDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYSCGDQ--NTLMEESAEQAQ 723

Query: 317 KRDSLVKKLELYKSARNEIDSV 252
           +RD +++     K A + I  +
Sbjct: 724 RRDEMLRMYHALKEALSIIGDI 745

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>DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)|
          Length = 867

 Score = 35.4 bits (80), Expect = 0.093
 Identities = 18/82 (21%), Positives = 42/82 (51%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 318
           V SY+ +V  T+R+ +PK ++H  +   K  + +   A++ S   +  + +++E     +
Sbjct: 666 VDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYSCGDQ--NTLMEESAEQAQ 723

Query: 317 KRDSLVKKLELYKSARNEIDSV 252
           +RD +++     K A + I  +
Sbjct: 724 RRDEMLRMYHALKEALSIIGDI 745

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>DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like protein 2)|
           (Dynamin-like protein 2a)
          Length = 808

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 21/80 (26%), Positives = 37/80 (46%)
 Frame = -2

Query: 491 SYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKR 312
           SY ++V   + +++PKA++H  V   KR L N F   +    +     ML E   +  KR
Sbjct: 679 SYYDIVRKNIEDSVPKAIMHFLVNHTKRELHNVFIKKL--YRENLFEEMLQEPDEIAVKR 736

Query: 311 DSLVKKLELYKSARNEIDSV 252
               + L + + A   +D +
Sbjct: 737 KRTQETLHVLQQAYRTLDEL 756

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>YB68_SCHPO (Q09748) Dynamin-like protein C12C2.08|
          Length = 781

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 19/82 (23%), Positives = 40/82 (48%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 318
           ++SY N+    + + +PK ++H  V  +K  + NR  + +  ++      +L ED  +  
Sbjct: 701 ITSYFNLTRKIIIDQVPKVIMHLLVNASKDAIQNRLVSKLYRED--FFDTLLIEDENVKS 758

Query: 317 KRDSLVKKLELYKSARNEIDSV 252
           +R+   + L +Y  A   I +V
Sbjct: 759 EREKCERLLSVYNQANKIISTV 780

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>COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor|
          Length = 1797

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +2

Query: 182  RYYKRSICSSHEQS--IRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRG 334
            R   R +C    QS   R   I++  PS+S S+RT   P    G P SP T G
Sbjct: 1618 RAVARQVCEQLIQSHMARYTAILNQIPSQSSSIRTIQGPPGEPGRPGSPGTPG 1670

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>DRP3B_ARATH (Q8LFT2) Dynamin-related protein 3B (Dynamin-like protein 2b)|
          Length = 780

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 21/82 (25%), Positives = 38/82 (46%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 318
           + SY ++V   + + +PKA++H  V   KR L N F   +    +  +  +L E   L  
Sbjct: 661 LKSYYDIVRKNVEDLVPKAIMHFLVNYTKRELHNVFIEKL--YRENLIEELLKEPDELAI 718

Query: 317 KRDSLVKKLELYKSARNEIDSV 252
           KR    + L + + A   +D +
Sbjct: 719 KRKRTQETLRILQQANRTLDEL 740

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>DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)|
          Length = 877

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 20/83 (24%), Positives = 40/83 (48%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 318
           V SY+ +V  T R+ +PKA++   +  AK  +     AH+ +   +  + M++E      
Sbjct: 657 VDSYMKIVTKTTRDMVPKAIMMLIINNAKDFINGELLAHLYASGDQ--AQMMEESAESAT 714

Query: 317 KRDSLVKKLELYKSARNEIDSVA 249
           +R+ +++     K A   I  V+
Sbjct: 715 RREEMLRMYRACKDALQIIGDVS 737

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>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)|
          Length = 303

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = +2

Query: 155 KAYAKRMERRYYKRSICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRG 334
           + Y  R + R   R    S  +S    + +S   SRSRS        SSR +P+  ++R 
Sbjct: 193 REYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRS 252

Query: 335 PRPASRS 355
           P P S+S
Sbjct: 253 PGPRSKS 259

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>WOX3A_MAIZE (Q70UV1) WUSCHEL-related homeobox 3A (Narrow sheath protein 1)|
          Length = 262

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 23/88 (26%), Positives = 38/88 (43%)
 Frame = +2

Query: 167 KRMERRYYKRSICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPA 346
           K  ER+  +R +C+ H+Q     Q             T  APASS  + ++  +     +
Sbjct: 61  KARERQRLRRRLCARHQQQYAQQQA------------TAAAPASSPNSSATVPSLAAGGS 108

Query: 347 SRSAAFSLCFLHAHRNG*AGFFLPPSLG 430
           S     ++  LH H++  A  F+P  LG
Sbjct: 109 SAGVHPAVMQLHHHQHPYATNFMPHQLG 136

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>VPS1_YEAST (P21576) Vacuolar sorting protein 1|
          Length = 704

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRN----LLNRFYAHVGSKEKKQLSAMLDEDP 330
           +SSY ++V  T+ + IPKA++   + ++K +    LL + Y       K+ +  +  E+ 
Sbjct: 625 ISSYFSIVKRTIADIIPKALMLKLIVKSKTDIQKVLLEKLYG------KQDIEELTKEND 678

Query: 329 ALMEKRDSLVKKLELYKSARNEIDSV 252
             +++R    K +E+ ++A   + SV
Sbjct: 679 ITIQRRKECKKMVEILRNASQIVSSV 704

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>COEA1_HUMAN (Q05707) Collagen alpha-1(XIV) chain precursor (Undulin)|
          Length = 1796

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +2

Query: 182  RYYKRSICSSHEQS--IRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRG 334
            R   R +C    QS   R   I++  PS S S+RT   P    G P SP   G
Sbjct: 1617 RSVARQVCEQLIQSHMARYTAILNQIPSHSSSIRTVQGPPGEPGRPGSPGAPG 1669

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>WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel sister|
            chromatids)
          Length = 1741

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
 Frame = +3

Query: 174  WSVATTNVLSVPATNSPSDQIRSFPCNRVDLVPCGLVQLQLLHE--------GIPLLHQR 329
            + + +  ++  P+    S++       R  LVP   V + L H         G  LL QR
Sbjct: 1412 YRLCSRQIMLHPSDGGGSNKEHPGVAMRELLVPVLKVLINLTHTFNEAQPSLGAELLGQR 1471

Query: 330  GVLVQHRAQLLFLFASYMRIETVEQVSFCLLHLAVHDC 443
            G +V+   +LL L A+Y+  + V ++S  +L L ++ C
Sbjct: 1472 GDVVETSFRLLLLSANYIPDQCVFELSILVLTLLINLC 1509

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>CUTL2_MOUSE (P70298) Homeobox protein cut-like 2 (Homeobox protein Cux-2)|
            (Cut-like 2)
          Length = 1426

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 21/50 (42%), Positives = 23/50 (46%)
 Frame = +2

Query: 197  SICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPA 346
            S C S E    S  +IS     S  L TC +PA S   P SPS  G  PA
Sbjct: 1326 SSCCSLEGPPNSPSVIS-----SPDLTTCVSPAPSSSAPISPSLPGAPPA 1370

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>CN044_MOUSE (Q8CB59) Protein C14orf44 homolog|
          Length = 589

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
 Frame = +2

Query: 149 VYKAYAKRMERRYYKRSICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPST 328
           +YKA+ KR   R   R       ++ R+   +    + S + R+C A  +  G  S   T
Sbjct: 377 LYKAFQKRAAERRETR-------ETTRNKPFLLRTANLSHTPRSCDAATAGGGKKSPQPT 429

Query: 329 RGPRPASRS----AAFSLCFLHAH 388
             P P SRS    A+FS   L  H
Sbjct: 430 ATPLPRSRSLSGLASFSANTLPVH 453

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>MAN1_YEAST (P22855) Alpha-mannosidase (EC 3.2.1.24) (Alpha-D-mannoside|
           mannohydrolase)
          Length = 1083

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
 Frame = +3

Query: 171 EWSVATTNVLSVPATNSPSDQIRSF-----PCNRVDLVPCGLVQLQLLHEGIPLLH 323
           EW  A T+VL   +   PS QI         C   D++P   +++   +E +P+LH
Sbjct: 592 EWIAAKTSVLYPDSYKYPSKQINELWENVLLCQFHDVLPGSCIEMVYKYEAVPMLH 647

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>PHLPP_RAT (Q9WTR8) PH domain leucine-rich repeat protein phosphatase (EC|
           3.1.3.16) (Pleckstrin homology domain-containing family
           E protein 1) (Suprachiasmatic nucleus circadian
           oscillatory protein)
          Length = 1696

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 260 RSRSLRTCTAPASSRGNPSSPSTR-GPRPASRSAAFSLC 373
           R R  R  +A ASS  +PSS S+  G  PAS SA+ SLC
Sbjct: 104 RGRLKRNLSAAASSSSSPSSASSAAGGLPASCSASASLC 142

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>WOX3B_MAIZE (Q6S3I3) WUSCHEL-related homeobox 3B (Narrow sheath protein 2)|
          Length = 265

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
 Frame = +2

Query: 167 KRMERRYYKRSICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPA 346
           K  ER+  +R +C+ H+Q          Q ++ +   T  APASS   P+S +T    PA
Sbjct: 61  KARERQRLRRRLCARHQQ----------QYAQQQQQATAAAPASS---PNSSATLLAPPA 107

Query: 347 SRSAAF-----SLCFLHAHRNG*AGFFLPPSLG 430
           +  ++      ++  LH H +  A  F  P LG
Sbjct: 108 AGGSSAPCVHPAVMQLHHHHHPYATSFSMPHLG 140

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>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2)
          Length = 659

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 23/58 (39%), Positives = 26/58 (44%)
 Frame = +2

Query: 182 RYYKRSICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPASRS 355
           RY +      H  S RS    S+ PSRSRSL        SR +  SPS    R  SRS
Sbjct: 463 RYRRGGRGLRHHSSSRSRSSWSLSPSRSRSL------TRSRSHSPSPSQSRSRSRSRS 514

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>EXOF_RHIME (Q02728) Exopolysaccharide production protein exoF precursor|
          Length = 421

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
 Frame = -2

Query: 461 RNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQ---LSAMLD-------EDPALMEKR 312
           R+TIP       V +A++ LL+   A + S++K+Q   L A+ D       E  AL +K 
Sbjct: 203 RDTIPMPEELKNVPDAEK-LLDSETALMESRDKRQKRQLDALADLRSLLQSEIEALAKKA 261

Query: 311 DSLVKKLELYKSARNEIDSVAWK 243
           ++  ++LEL    R+++DS+A K
Sbjct: 262 ETQARQLELATEDRDKVDSLAEK 284

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>COEA1_CHICK (P32018) Collagen alpha-1(XIV) chain precursor (Undulin)|
          Length = 1888

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = +2

Query: 182  RYYKRSICSSHEQS--IRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRG 334
            R   R +C    Q    R + I++  PS+S S RT   P    G P +P  +G
Sbjct: 1627 RAVARQVCEQLIQGHMARYNSILNQIPSQSVSTRTIAGPPGEPGRPGAPGPQG 1679

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>K0182_HUMAN (Q14687) Protein KIAA0182 (Fragment)|
          Length = 1157

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = -1

Query: 489 LHQHGLRYIEEHDSESSRALPSEGGKKKPAQPFLC--ACRKQREKAAERDAGRGPRVDGE 316
           LH  G+RY  E    S  AL SE      A+        R++RE+  ER+  R    + E
Sbjct: 239 LHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADRERE 298

Query: 315 EGFPREEAGAVQVRKERDR 259
           +   RE     +  KER+R
Sbjct: 299 KEREREREKEREQEKERER 317

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>DOCK4_MOUSE (P59764) Dedicator of cytokinesis protein 4|
          Length = 1978

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +2

Query: 218  QSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRP 343
            QS  SD++ +MQPS S S  + T  AS     S+PS+    P
Sbjct: 1669 QSESSDEVFNMQPSPSTSSLSSTHSASPNVTSSAPSSARASP 1710

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>DOCK4_HUMAN (Q8N1I0) Dedicator of cytokinesis protein 4|
          Length = 1966

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +2

Query: 218  QSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRP 343
            QS  SD++ +MQPS S S  + T  AS     S+PS+    P
Sbjct: 1660 QSESSDEVFNMQPSPSTSSLSSTHSASPNVTSSAPSSARASP 1701

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>SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Splicing factor|
           9G8)
          Length = 238

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +2

Query: 179 RRYYKRSICSSHEQSIRSDQIISMQPSRSRSL-RTCTAPASSRGNPSSPSTRGPRPASRS 355
           RR    S+  S   SI+  +     PSRSRS  R+ + P SSR    SPS +  R  S S
Sbjct: 169 RRSRSASLRRSRSGSIKGSRYFQ-SPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSGS 227

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>K0179_HUMAN (Q14684) Protein KIAA0179|
          Length = 758

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
 Frame = -1

Query: 462 EEHDSESSRALPSEGGKKKPAQPFLCACRKQREKAA---ERDAGRGPRVDGEEGFPREEA 292
           EE  SE   A+P    +K+P +    A R+  E A    E  +  GP     +G      
Sbjct: 456 EESGSEHPPAVPMHNKRKRPRKKSPRAHREMLESAVLPPEDMSQSGPSGSHPQGPRGSPT 515

Query: 291 GAVQVRKERDRLGCMEMI*SDLMDCSW 211
           G  Q+ K + +LG + +  S L   +W
Sbjct: 516 GGAQLLKRKRKLGVVPVNGSGLSTPAW 542

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>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +2

Query: 245  SMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPASRSAAF 364
            S  P+ S S R   +P   RG P +PS+ GP PAS  ++F
Sbjct: 942  STPPAPSSSGRLTPSP---RGGPFNPSSGGPLPASSPSSF 978

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>CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-channel|
           [Contains: Glutamic acid-rich protein (GARP);
           Cyclic-nucleotide-gated cation channel 4 (CNG channel 4)
           (CNG-4) (Cyclic nucleotide-gated cation channel
           modulatory subunit)]
          Length = 1394

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = -1

Query: 462 EEHDSESSRALPSEGGKKKPAQPFLCACRKQREKAAERDAGRGPRVDGEEGFPREEAGAV 283
           EE + E  R    E G+KK  +       K+ E+  E++   G   + EEG  +EE    
Sbjct: 383 EEKEEEEGREKEEEEGEKKEEE----GREKEEEEGGEKEDEEGREKEEEEGRGKEEEEGG 438

Query: 282 QVRKERDR 259
           +  +E  R
Sbjct: 439 EKEEEEGR 446

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>OVO_DROME (P51521) Protein ovo (Protein shaven baby)|
          Length = 1351

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/51 (35%), Positives = 21/51 (41%)
 Frame = +2

Query: 269 SLRTCTAPASSRGNPSSPSTRGPRPASRSAAFSLCFLHAHRNG*AGFFLPP 421
           SLR  + P  +   PS P  R P PA R +              AGF LPP
Sbjct: 318 SLRLRSTPPPADQRPSPPPPRDPAPAVRCSVIQRAPQSQLPTSRAGFLLPP 368

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>IF140_HUMAN (Q96RY7) Intraflagellar transport 140 homolog (WD and|
            tetratricopeptide repeats protein 2)
          Length = 1462

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 15/73 (20%), Positives = 34/73 (46%)
 Frame = -2

Query: 461  RNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELY 282
            R  + + +  C +++   +L  + Y   G+K K   + +   D   +    S+ ++ E+Y
Sbjct: 1188 RRELLEQIADCCMRQGSYHLATKKYTQAGNKLKAMRALLKSGDTEKITFFASVSRQKEIY 1247

Query: 281  KSARNEIDSVAWK 243
              A N + S+ W+
Sbjct: 1248 IMAANYLQSLDWR 1260

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>DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)|
          Length = 691

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQ-LSAMLDEDPALM 321
           + SY  +V   +++++PKAV+H  V   K +L +     VG   K   L  +L E   + 
Sbjct: 606 IKSYFLIVRKNIQDSVPKAVMHFLVNHVKDSLQSEL---VGQLYKPALLDDLLTESEDMA 662

Query: 320 EKRDSLVKKLELYKSARNEIDSV 252
           ++R+     L+  + A   I  +
Sbjct: 663 QRRNEAADMLKALQKASQVIAEI 685

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>PDX1_NEUCR (Q9C1K6) Probable pyridoxin biosynthesis protein pdx-1|
          Length = 308

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = -1

Query: 501 ECIILHQHGLRYIEEHDSESSRALPSEGGKKKPAQPFLCACRKQREKAAERDAGRGP-RV 325
           EC IL Q G+ YI+E +  +         K +   PF+C CR   E       G    R 
Sbjct: 95  ECRILEQLGVDYIDESEVLTPADDTYHVQKDQFKAPFVCGCRNLGEALRRIKEGAAMIRT 154

Query: 324 DGEEG 310
            GE G
Sbjct: 155 KGEAG 159

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>DNM1L_RAT (O35303) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-like protein)|
          Length = 755

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQ-LSAMLDEDPALM 321
           + SY  +V   +++++PKAV+H  V   K  L +     VG   K   L  +L E   + 
Sbjct: 670 IKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSEL---VGQLYKSSLLDDLLTESEDMA 726

Query: 320 EKRDSLVKKLELYKSARNEIDSV 252
           ++R      L+  + A   I  +
Sbjct: 727 QRRKEAADMLKALQGASQIIAEI 749

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>DNM1L_MOUSE (Q8K1M6) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-related|
           protein 1) (Dynamin family member proline-rich
           carboxyl-terminal domain less) (Dymple)
          Length = 742

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQ-LSAMLDEDPALM 321
           + SY  +V   +++++PKAV+H  V   K  L +     VG   K   L  +L E   + 
Sbjct: 657 IKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSEL---VGQLYKSSLLDDLLTESEDMA 713

Query: 320 EKRDSLVKKLELYKSARNEIDSV 252
           ++R      L+  + A   I  +
Sbjct: 714 QRRKEAADMLKALQGASQIIAEI 736

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>DNM1L_HUMAN (O00429) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-like protein)|
           (Dnm1p/Vps1p-like protein) (DVLP) (Dynamin family member
           proline-rich carboxyl-terminal domain less) (Dymple)
           (Dynamin-related protein 1) (Dynamin-like protein 4)
           (Dynamin-li
          Length = 736

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQ-LSAMLDEDPALM 321
           + SY  +V   +++++PKAV+H  V   K  L +     VG   K   L  +L E   + 
Sbjct: 651 IKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSEL---VGQLYKSSLLDDLLTESEDMA 707

Query: 320 EKRDSLVKKLELYKSARNEIDSV 252
           ++R      L+  + A   I  +
Sbjct: 708 QRRKEAADMLKALQGASQIIAEI 730

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>DHE4_CHLSO (P28998) NADP-specific glutamate dehydrogenase (EC 1.4.1.4)|
           (NADP-GDH) (Fragment)
          Length = 523

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = -1

Query: 444 SSRALPSEGGKKKPAQPFLCACRK----QREKAAERDAGRGPRVDGEEG 310
           SS +L    G + PA P   AC +    +R+ AA+R   R PR+D   G
Sbjct: 5   SSPSLSWPPGLRSPALPRAVACARGRSAKRDVAAKRLRSRSPRMDATTG 53

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>GAS3_YEAST (Q03655) Glycolipid-anchored surface protein 3 precursor|
          Length = 524

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +2

Query: 245 SMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPASRS 355
           S   S SRSL + T+P+SS G+ SS  +     +S+S
Sbjct: 460 STSQSSSRSLTSSTSPSSSTGSSSSTGSSSASSSSKS 496

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>YKP4_KLULA (P05470) Hypothetical killer plasmid pGKL-2 protein 4 (EC 3.6.1.-)|
           (Hypothetical killer plasmid pGKL-2 helicase)
          Length = 597

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 17/82 (20%), Positives = 43/82 (52%)
 Frame = -2

Query: 497 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 318
           +S+ +N + D   N   K V+  ++   K+N+  + ++   + EK+  S  +D    +++
Sbjct: 88  LSNSLNSI-DNFSNEYEKVVLDSRLNSLKKNITIKSFSKFYNCEKRGESDNVDYGLIILD 146

Query: 317 KRDSLVKKLELYKSARNEIDSV 252
           +  +L +    YK  +N++D++
Sbjct: 147 EVHNLRESAYRYKLIKNKLDTM 168

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>NEBU_HUMAN (P20929) Nebulin|
          Length = 6669

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
 Frame = -2

Query: 416  AKRNLLN---RFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELYKSARNE 264
            AK N LN   R Y     K+K Q+  M D    ++ +++ +     LYK A  E
Sbjct: 2954 AKNNALNMNKRLYTEAWDKDKTQIHIMPDTPEIMLARQNKINYSETLYKLANEE 3007


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,913,950
Number of Sequences: 219361
Number of extensions: 1476617
Number of successful extensions: 6347
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 5853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6275
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result