ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7c02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009416.1| Triticum aestivum clone wlmk1.pk0006.c8:fis, full... 684 0.0
2ref|XM_469531.1| Oryza sativa (japonica cultivar-group), mRNA 280 4e-72
3gb|AY109633.1| Zea mays CL692_1 mRNA sequence 232 9e-58
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 165 2e-37
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
6gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 geno... 165 2e-37
7gb|BC059804.1| Danio rerio solute carrier family 6 (neurotransmi... 44 0.45
8gb|AC149720.2| Bos taurus BAC CH240-248M14 (Children's Hospital ... 44 0.45
9gb|DQ356948.1| Crocodilepox virus, complete genome 44 0.45
10gb|AY644517.2| Bos taurus T cell receptor gamma (TCRG) gene, par... 44 0.45
11emb|CR391912.8| Zebrafish DNA sequence from clone CH211-254P10 i... 44 0.45
12ref|NM_199736.1| Danio rerio solute carrier family 6 (neurotrans... 44 0.45
13gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete... 42 1.8
14ref|NM_001016374.2| Xenopus tropicalis hypothetical protein LOC5... 42 1.8
15gb|BC083363.1| Danio rerio zgc:103407, mRNA (cDNA clone MGC:1034... 42 1.8
16ref|NM_001004014.1| Danio rerio zgc:103407 (zgc:103407), mRNA 42 1.8
17gb|AC120529.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
18ref|XM_870526.1| PREDICTED: Bos taurus similar to T-cell surface... 42 1.8
19gb|AC150855.6| Bos taurus BAC CH240-472P12 (Children's Hospital... 42 1.8
20gb|AC150650.5| Bos taurus BAC CH240-447L3 (Children's Hospital ... 42 1.8
21ref|XM_871629.1| PREDICTED: Bos taurus hypothetical LOC527084, t... 42 1.8
22ref|XM_605473.2| PREDICTED: Bos taurus hypothetical LOC527084, t... 42 1.8
23gb|BC077652.1| Xenopus tropicalis cDNA clone IMAGE:7025807, part... 42 1.8
24gb|AC091252.3| Bos taurus clone RP42-324C24, complete sequence 42 1.8
25gb|DP000008.1| Bos taurus target 1 genomic scaffold 42 1.8
26gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genom... 42 1.8
27gb|AY038865.1|AY038861S05 Mus musculus protein tyrosine phosphat... 42 1.8
28gb|BC105473.1| Bos taurus cDNA clone IMAGE:7988010, with apparen... 42 1.8
29emb|AJ579374.1|DRE579374 Danio rerio mRNA for mothers against de... 42 1.8
30emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chrom... 42 1.8
31emb|CR761261.2| Xenopus tropicalis finished cDNA, clone TEgg142n01 42 1.8
32gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 ... 42 1.8
33emb|AL954341.14| Mouse DNA sequence from clone RP23-213D14 on ch... 42 1.8
34gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 7.0
35gb|DQ205538.1| Bos taurus prion protein (PRNP) and prion-like pr... 40 7.0
36ref|NM_001035415.1| Bos taurus enoyl Coenzyme A hydratase domain... 40 7.0
37ref|XM_467718.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.0
38gb|BT021498.1| Bos taurus enoyl Coenzyme A hydratase domain cont... 40 7.0
39gb|AC150574.2| Bos taurus BAC CH240-237H4 (Children's Hospital ... 40 7.0
40gb|AC150515.3| Bos taurus BAC CH240-118E9 (Children's Hospital ... 40 7.0
41gb|AC151060.4| Bos taurus BAC CH240-293H4 (Children's Hospital ... 40 7.0
42gb|AC150871.4| Bos taurus BAC CH240-316E7 (Children's Hospital ... 40 7.0
43gb|AC149778.2| Bos taurus BAC CH240-9E7 (Children's Hospital Oa... 40 7.0
44gb|AC150548.2| Bos taurus BAC CH240-72J19 (Children's Hospital ... 40 7.0
45gb|AY944236.1| Bos taurus prion preproprotein (PRNP) and prion-l... 40 7.0
46gb|AC091728.2| Bos taurus clone RP42-99M11, complete sequence 40 7.0
47gb|AC090976.2| Bos taurus clone RP42-400M23, complete sequence 40 7.0
48gb|AC146269.3| Pan troglodytes BAC clone RP43-29B18 from 7, comp... 40 7.0
49gb|AC136621.2| Homo sapiens chromosome 16 clone RP11-481F24, com... 40 7.0
50gb|AC026802.9| Homo sapiens chromosome 16 clone CTD-2545G24, com... 40 7.0
51gb|AY154895.1| Bos taurus alpha-S1 casein gene and alpha-S1 case... 40 7.0
52gb|AF252492.1| Bos taurus clone MNB-80 microsatellite sequence 40 7.0
53emb|AL445563.1|MPULM01 Mycoplasma pulmonis (strain UAB CTIP) com... 40 7.0
54emb|AL138972.1|DMBR25B3 Drosophila melanogaster BAC clone BACR25B3 40 7.0
55emb|AL662921.10| Mouse DNA sequence from clone RP23-397K10 on ch... 40 7.0
56emb|BX950184.7| Zebrafish DNA sequence from clone CH211-103O12 i... 40 7.0
57emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on ch... 40 7.0
58gb|AC007602.6| Homo sapiens chromosome 16 clone RP11-2D4, comple... 40 7.0
59gb|AC151605.2| Emiliania huxleyi clone JGIACCU-13A3, complete se... 40 7.0
60gb|AC104140.5| Drosophila melanogaster X BAC RP98-9H13 (Roswell ... 40 7.0
61ref|NM_166946.1| Drosophila melanogaster egghead CG9659-RB, tran... 40 7.0
62dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 40 7.0
63gb|U21218.1|DMU21218 Drosophila melanogaster zeste-white 4 gene,... 40 7.0
64ref|NM_080313.2| Drosophila melanogaster egghead CG9659-RC, tran... 40 7.0
65gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.0
66gb|AC074044.8| Homo sapiens 3q BAC RP11-484K9 (Roswell Park Canc... 40 7.0
67gb|AC008948.8| Homo sapiens chromosome 5 clone CTD-2333K2, compl... 40 7.0
68gb|BC105549.1| Bos taurus enoyl Coenzyme A hydratase domain cont... 40 7.0
69gb|U15731.2|BTU15731 Bos taurus somatotropin receptor gene, exon... 40 7.0
70gb|AC134864.5| Mus musculus BAC clone RP24-132O18 from chromosom... 40 7.0
71gb|AC025972.6|AC025972 Homo sapiens chromosome 11, clone RP11-6K... 40 7.0
72dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
73dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
74dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
75gb|AF233288.1| Drosophila melanogaster WDS (wds) and egghead (eg... 40 7.0
76dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
77dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
78dbj|AK107872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
79dbj|AK071385.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
80gb|AY325816.1| Zea mays BAC clone Z013I05, complete sequence 40 7.0
81gb|AF464738.1| Zea mays cultivar B73 putative gag protein, putat... 40 7.0
82emb|AL928816.2| Zebrafish DNA sequence from clone BUSM1-265N4, c... 40 7.0
83tpe|BN000291.1|BTA000291 TPA: TPA_exp: Bos taurus prp gene for p... 40 7.0
84gb|AE003424.2| Drosophila melanogaster chromosome X, section 8 o... 40 7.0
85emb|AJ298878.1|BTA298878 Bos taurus prp gene for prion protein 40 7.0
86gb|U15602.1|DMU15602 Drosophila melanogaster (zeste-white 4) mRN... 40 7.0
87emb|AL831725.5| Mouse DNA sequence from clone RP23-106P7 on chro... 40 7.0
88emb|AJ421481.1| Bos taurus X-inactivation center region, Jpx and... 40 7.0 
>gb|BT009416.1| Triticum aestivum clone wlmk1.pk0006.c8:fis, full insert mRNA
            sequence
          Length = 1869

 Score =  684 bits (345), Expect = 0.0
 Identities = 470/511 (91%), Gaps = 13/511 (2%)
 Strand = Plus / Minus

                                                                        
Query: 4    ttgaataaagaatacatcatctgcatcaatataatcgatacggatcatacaggaggccaa 63
            ||||| ||||||||||||||||| || |||||   ||||||| |||||||||||||||||
Sbjct: 1867 ttgaacaaagaatacatcatctgtattaatat---cgatacgaatcatacaggaggccaa 1811

                                                                        
Query: 64   aggatggttggcccaaggaagcaactgcgtctgtccatgtctcgtctaggcggtagccac 123
            |||||||     |||| |||||||| | ||||||||||||||||     | |||||||||
Sbjct: 1810 aggatgg-----ccaaagaagcaacggtgtctgtccatgtctcg-----gtggtagccac 1761

                                                                        
Query: 124  aaaacaacactcggcaacaaagaccgtgtacaaagcatatgcaaaacgaatggagcgtcg 183
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || 
Sbjct: 1760 aaaacaacactcggcaacaaagcccgtgtacaaagcatatgcaaaacgaatggagcatct 1701

                                                                        
Query: 184  ctactacaaacgttctatctgttccagccacgaacagtccatcagatcagatcagatcat 243
            |||||||| | |||||||||||||||||| | |||  || ||| ||||||||||||||||
Sbjct: 1700 ctactacacatgttctatctgttccagccgcaaacgctctatcggatcagatcagatcat 1641

                                                                        
Query: 244  ttccatgcaaccgagtcgatctcgttccttgcggacttgtacagctccagcttcttcacg 303
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1640 ttccatgcaaccgagtcgatctcgttcctcgcggacttgtacagctccagcttcttcacg 1581

                                                                        
Query: 304  agggaatccctcttctccatcaacgcggggtcctcgtccagcatcgcgctcagctgcttt 363
            ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || 
Sbjct: 1580 agggaatccctcttctccatcaacgcgggatcctcgtccagcatcgcgctcagctgtttc 1521

                                                                        
Query: 364  ttctctttgcttcctacatgcgcatagaaacggttgagcaggtttctttttgcctccttc 423
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1520 ttctctttgcttcctacatgcgcatagaaacggttgagcaagtttctttttgcctccttc 1461

                                                                        
Query: 424  acttggcagtgcacgactgctttcggaatcgtgttcctcaatgtatcgcaaaccatgttg 483
            |||||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1460 acttggcaatgcacaacggctttcggaattgtgttcctcaatgtatcgcaaaccatgttg 1401

                                           
Query: 484  atgtaagatgatacattcgatccgattcttc 514
            |||||||||||||||||||||||||||||||
Sbjct: 1400 atgtaagatgatacattcgatccgattcttc 1370
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>ref|XM_469531.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2114

 Score =  280 bits (141), Expect = 4e-72
 Identities = 243/277 (87%)
 Strand = Plus / Minus

                                                                        
Query: 238  gatcatttccatgcaaccgagtcgatctcgttccttgcggacttgtacagctccagcttc 297
            ||||||||||| || || ||||||||||||||||  || || ||||||||||| ||| ||
Sbjct: 1838 gatcatttccacgcgactgagtcgatctcgttccgggcagatttgtacagctctagcctc 1779

                                                                        
Query: 298  ttcacgagggaatccctcttctccatcaacgcggggtcctcgtccagcatcgcgctcagc 357
            || || | ||||||||||||||||||||| ||||| ||||| |||| ||||||||| |||
Sbjct: 1778 ttgactaaggaatccctcttctccatcaaagcgggatcctcatccaacatcgcgctgagc 1719

                                                                        
Query: 358  tgctttttctctttgcttcctacatgcgcatagaaacggttgagcaggtttctttttgcc 417
            || || ||||| |||||||| ||||| |||||||||||||| |||| |||||||||||||
Sbjct: 1718 tgtttcttctccttgcttcccacatgagcatagaaacggttaagcaagtttctttttgcc 1659

                                                                        
Query: 418  tccttcacttggcagtgcacgactgctttcggaatcgtgttcctcaatgtatcgcaaacc 477
            ||||||||||| |||||||| || ||||| ||||| |||||||||||||| || ||||||
Sbjct: 1658 tccttcacttgacagtgcaccacagcttttggaatggtgttcctcaatgtctcacaaacc 1599

                                                 
Query: 478  atgttgatgtaagatgatacattcgatccgattcttc 514
            ||||| ||||||||||||||||| || ||||||||||
Sbjct: 1598 atgttaatgtaagatgatacatttgacccgattcttc 1562
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>gb|AY109633.1| Zea mays CL692_1 mRNA sequence
          Length = 2155

 Score =  232 bits (117), Expect = 9e-58
 Identities = 235/276 (85%)
 Strand = Plus / Minus

                                                                        
Query: 239  atcatttccatgcaaccgagtcgatctcgttccttgcggacttgtacagctccagcttct 298
            ||||||||||||| |||||||||||||| |||||||| || ||||||||||| ||| |||
Sbjct: 1919 atcatttccatgcgaccgagtcgatctcattccttgcagatttgtacagctctagcctct 1860

                                                                        
Query: 299  tcacgagggaatccctcttctccatcaacgcggggtcctcgtccagcatcgcgctcagct 358
            | || | || |||||||||||||||||| ||    ||||| |||| ||||||||||||||
Sbjct: 1859 tgaccaaggcatccctcttctccatcaaagcnnnntcctcatccaacatcgcgctcagct 1800

                                                                        
Query: 359  gctttttctctttgcttcctacatgcgcatagaaacggttgagcaggtttctttttgcct 418
            | || ||||| |||||||| ||||| |||||||||||||| ||||  |||| ||| | ||
Sbjct: 1799 gnttcttctccttgcttcccacatgagcatagaaacggttaagcaaatttcatttcggct 1740

                                                                        
Query: 419  ccttcacttggcagtgcacgactgctttcggaatcgtgttcctcaatgtatcgcaaacca 478
            | ||||||||||| |||||||  |||||||||| |||||||||||  || || || ||||
Sbjct: 1739 ctttcacttggcaatgcacgatggctttcggaaccgtgttcctcagagtctcacagacca 1680

                                                
Query: 479  tgttgatgtaagatgatacattcgatccgattcttc 514
            |||| || |||||||| |||||||||||||||||||
Sbjct: 1679 tgttaatataagatgacacattcgatccgattcttc 1644
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  165 bits (83), Expect = 2e-37
 Identities = 119/131 (90%)
 Strand = Plus / Minus

                                                                            
Query: 370      ttgcttcctacatgcgcatagaaacggttgagcaggtttctttttgcctccttcacttgg 429
                |||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||||| 
Sbjct: 28556951 ttgcttcccacatgagcatagaaacggttaagcaagtttctttttgcctccttcacttga 28556892

                                                                            
Query: 430      cagtgcacgactgctttcggaatcgtgttcctcaatgtatcgcaaaccatgttgatgtaa 489
                |||||||| || ||||| ||||| |||||||||||||| || ||||||||||| ||||||
Sbjct: 28556891 cagtgcaccacagcttttggaatggtgttcctcaatgtctcacaaaccatgttaatgtaa 28556832

                           
Query: 490      gatgatacatt 500
                |||||||||||
Sbjct: 28556831 gatgatacatt 28556821



 Score =  107 bits (54), Expect = 4e-20
 Identities = 105/122 (86%)
 Strand = Plus / Minus

                                                                            
Query: 238      gatcatttccatgcaaccgagtcgatctcgttccttgcggacttgtacagctccagcttc 297
                ||||||||||| || || ||||||||||||||||  || || ||||||||||| ||| ||
Sbjct: 28557330 gatcatttccacgcgactgagtcgatctcgttccgggcagatttgtacagctctagcctc 28557271

                                                                            
Query: 298      ttcacgagggaatccctcttctccatcaacgcggggtcctcgtccagcatcgcgctcagc 357
                || || | ||||||||||||||||||||| ||||| ||||| |||| ||||||||| |||
Sbjct: 28557270 ttgactaaggaatccctcttctccatcaaagcgggatcctcatccaacatcgcgctgagc 28557211

                  
Query: 358      tg 359
                ||
Sbjct: 28557210 tg 28557209



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 222      ccatcagatcagatcagatca 242
                |||||||||||||||||||||
Sbjct: 31779359 ccatcagatcagatcagatca 31779379



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 223      catcagatcagatcagatcat 243
                |||||||||||||||||||||
Sbjct: 16917438 catcagatcagatcagatcat 16917458



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 224     atcagatcagatcagatcat 243
               ||||||||||||||||||||
Sbjct: 4739217 atcagatcagatcagatcat 4739198
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  165 bits (83), Expect = 2e-37
 Identities = 119/131 (90%)
 Strand = Plus / Minus

                                                                            
Query: 370      ttgcttcctacatgcgcatagaaacggttgagcaggtttctttttgcctccttcacttgg 429
                |||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||||| 
Sbjct: 28648275 ttgcttcccacatgagcatagaaacggttaagcaagtttctttttgcctccttcacttga 28648216

                                                                            
Query: 430      cagtgcacgactgctttcggaatcgtgttcctcaatgtatcgcaaaccatgttgatgtaa 489
                |||||||| || ||||| ||||| |||||||||||||| || ||||||||||| ||||||
Sbjct: 28648215 cagtgcaccacagcttttggaatggtgttcctcaatgtctcacaaaccatgttaatgtaa 28648156

                           
Query: 490      gatgatacatt 500
                |||||||||||
Sbjct: 28648155 gatgatacatt 28648145



 Score =  107 bits (54), Expect = 4e-20
 Identities = 105/122 (86%)
 Strand = Plus / Minus

                                                                            
Query: 238      gatcatttccatgcaaccgagtcgatctcgttccttgcggacttgtacagctccagcttc 297
                ||||||||||| || || ||||||||||||||||  || || ||||||||||| ||| ||
Sbjct: 28648654 gatcatttccacgcgactgagtcgatctcgttccgggcagatttgtacagctctagcctc 28648595

                                                                            
Query: 298      ttcacgagggaatccctcttctccatcaacgcggggtcctcgtccagcatcgcgctcagc 357
                || || | ||||||||||||||||||||| ||||| ||||| |||| ||||||||| |||
Sbjct: 28648594 ttgactaaggaatccctcttctccatcaaagcgggatcctcatccaacatcgcgctgagc 28648535

                  
Query: 358      tg 359
                ||
Sbjct: 28648534 tg 28648533



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 222      ccatcagatcagatcagatca 242
                |||||||||||||||||||||
Sbjct: 31869875 ccatcagatcagatcagatca 31869895



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 223      catcagatcagatcagatcat 243
                |||||||||||||||||||||
Sbjct: 16911011 catcagatcagatcagatcat 16911031



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 224     atcagatcagatcagatcat 243
               ||||||||||||||||||||
Sbjct: 4739332 atcagatcagatcagatcat 4739313
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>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete
              sequence
          Length = 158839

 Score =  165 bits (83), Expect = 2e-37
 Identities = 119/131 (90%)
 Strand = Plus / Plus

                                                                          
Query: 370    ttgcttcctacatgcgcatagaaacggttgagcaggtttctttttgcctccttcacttgg 429
              |||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||||| 
Sbjct: 141945 ttgcttcccacatgagcatagaaacggttaagcaagtttctttttgcctccttcacttga 142004

                                                                          
Query: 430    cagtgcacgactgctttcggaatcgtgttcctcaatgtatcgcaaaccatgttgatgtaa 489
              |||||||| || ||||| ||||| |||||||||||||| || ||||||||||| ||||||
Sbjct: 142005 cagtgcaccacagcttttggaatggtgttcctcaatgtctcacaaaccatgttaatgtaa 142064

                         
Query: 490    gatgatacatt 500
              |||||||||||
Sbjct: 142065 gatgatacatt 142075



 Score =  107 bits (54), Expect = 4e-20
 Identities = 105/122 (86%)
 Strand = Plus / Plus

                                                                          
Query: 238    gatcatttccatgcaaccgagtcgatctcgttccttgcggacttgtacagctccagcttc 297
              ||||||||||| || || ||||||||||||||||  || || ||||||||||| ||| ||
Sbjct: 141566 gatcatttccacgcgactgagtcgatctcgttccgggcagatttgtacagctctagcctc 141625

                                                                          
Query: 298    ttcacgagggaatccctcttctccatcaacgcggggtcctcgtccagcatcgcgctcagc 357
              || || | ||||||||||||||||||||| ||||| ||||| |||| ||||||||| |||
Sbjct: 141626 ttgactaaggaatccctcttctccatcaaagcgggatcctcatccaacatcgcgctgagc 141685

                
Query: 358    tg 359
              ||
Sbjct: 141686 tg 141687
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>gb|BC059804.1| Danio rerio solute carrier family 6 (neurotransmitter transporter),
           member 19, mRNA (cDNA clone MGC:66050 IMAGE:6795026),
           complete cds
          Length = 2580

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 303 gagggaatccctcttctccatc 324
           ||||||||||||||||||||||
Sbjct: 267 gagggaatccctcttctccatc 288
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>gb|AC149720.2| Bos taurus BAC CH240-248M14 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 180339

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 221   tccatcagatcagatcagatca 242
             ||||||||||||||||||||||
Sbjct: 36826 tccatcagatcagatcagatca 36805



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 31285 catcagatcagatcagatca 31304
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>gb|DQ356948.1| Crocodilepox virus, complete genome
          Length = 190054

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 336    ctcgtccagcatcgcgctcagc 357
              ||||||||||||||||||||||
Sbjct: 130263 ctcgtccagcatcgcgctcagc 130242
to top
>gb|AY644517.2| Bos taurus T cell receptor gamma (TCRG) gene, partial sequence
          Length = 243699

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 224    atcagatcagatcagatcattt 245
              ||||||||||||||||||||||
Sbjct: 148900 atcagatcagatcagatcattt 148921
to top
>emb|CR391912.8| Zebrafish DNA sequence from clone CH211-254P10 in linkage group 16,
              complete sequence
          Length = 151269

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 303    gagggaatccctcttctccatc 324
              ||||||||||||||||||||||
Sbjct: 147020 gagggaatccctcttctccatc 146999
to top
>ref|NM_199736.1| Danio rerio solute carrier family 6 (neurotransmitter transporter),
           member 19 (slc6a19), mRNA
          Length = 2580

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 303 gagggaatccctcttctccatc 324
           ||||||||||||||||||||||
Sbjct: 267 gagggaatccctcttctccatc 288
to top
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence
          Length = 181148

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 406   tttctttttgcctccttcacttggc 430
             ||||||||||| |||||||||||||
Sbjct: 65397 tttctttttgcgtccttcacttggc 65421
to top
>ref|NM_001016374.2| Xenopus tropicalis hypothetical protein LOC549128 (LOC549128), mRNA
          Length = 547

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 403 aggtttctttttgcctccttc 423
           |||||||||||||||||||||
Sbjct: 39  aggtttctttttgcctccttc 19
to top
>gb|BC083363.1| Danio rerio zgc:103407, mRNA (cDNA clone MGC:103407 IMAGE:7232411),
           complete cds
          Length = 1998

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 291 cagcttcttcacgagggaatc 311
           |||||||||||||||||||||
Sbjct: 276 cagcttcttcacgagggaatc 256
to top
>ref|NM_001004014.1| Danio rerio zgc:103407 (zgc:103407), mRNA
          Length = 1978

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 291 cagcttcttcacgagggaatc 311
           |||||||||||||||||||||
Sbjct: 283 cagcttcttcacgagggaatc 263
to top
>gb|AC120529.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0039N21, complete sequence
          Length = 151732

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 223   catcagatcagatcagatcat 243
             |||||||||||||||||||||
Sbjct: 60442 catcagatcagatcagatcat 60462
to top
>ref|XM_870526.1| PREDICTED: Bos taurus similar to T-cell surface glycoprotein CD1b
           precursor (CD1b antigen) (LOC618200), partial mRNA
          Length = 1027

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 222 ccatcagatcagatcagatca 242
           |||||||||||||||||||||
Sbjct: 708 ccatcagatcagatcagatca 688
to top
>gb|AC150855.6| Bos taurus  BAC CH240-472P12 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 168955

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 222    ccatcagatcagatcagatca 242
              |||||||||||||||||||||
Sbjct: 145702 ccatcagatcagatcagatca 145722
to top
>gb|AC150650.5| Bos taurus  BAC CH240-447L3 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 148126

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 222   ccatcagatcagatcagatca 242
             |||||||||||||||||||||
Sbjct: 82150 ccatcagatcagatcagatca 82170



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 32229 catcagatcagatcagatca 32210
to top
>ref|XM_871629.1| PREDICTED: Bos taurus hypothetical LOC527084, transcript variant 3
           (LOC527084), mRNA
          Length = 1534

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 tgtacagctccagcttcttca 301
           |||||||||||||||||||||
Sbjct: 297 tgtacagctccagcttcttca 277
to top
>ref|XM_605473.2| PREDICTED: Bos taurus hypothetical LOC527084, transcript variant 1
           (LOC527084), mRNA
          Length = 2784

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 tgtacagctccagcttcttca 301
           |||||||||||||||||||||
Sbjct: 298 tgtacagctccagcttcttca 278
to top
>gb|BC077652.1| Xenopus tropicalis cDNA clone IMAGE:7025807, partial cds
          Length = 570

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 403 aggtttctttttgcctccttc 423
           |||||||||||||||||||||
Sbjct: 78  aggtttctttttgcctccttc 58
to top
>gb|AC091252.3| Bos taurus clone RP42-324C24, complete sequence
          Length = 183383

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 222   ccatcagatcagatcagatca 242
             |||||||||||||||||||||
Sbjct: 77639 ccatcagatcagatcagatca 77619
to top
>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 222     ccatcagatcagatcagatca 242
               |||||||||||||||||||||
Sbjct: 1597855 ccatcagatcagatcagatca 1597835



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 223     catcagatcagatcagatca 242
               ||||||||||||||||||||
Sbjct: 1211990 catcagatcagatcagatca 1211971



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    catcagatcagatcagatca 242
              ||||||||||||||||||||
Sbjct: 345898 catcagatcagatcagatca 345879
to top
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete
              sequence
          Length = 134496

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 222    ccatcagatcagatcagatca 242
              |||||||||||||||||||||
Sbjct: 104585 ccatcagatcagatcagatca 104605
to top
>gb|AY038865.1|AY038861S05 Mus musculus protein tyrosine phosphatase receptor-like protein J
             (Ptprj) gene, intron 1
          Length = 13896

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 196   ttctatctgttccagccacga 216
             |||||||||||||||||||||
Sbjct: 10328 ttctatctgttccagccacga 10308
to top
>gb|BC105473.1| Bos taurus cDNA clone IMAGE:7988010, with apparent retained intron
          Length = 2329

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 222  ccatcagatcagatcagatca 242
            |||||||||||||||||||||
Sbjct: 1996 ccatcagatcagatcagatca 1976
to top
>emb|AJ579374.1|DRE579374 Danio rerio mRNA for mothers against decapentaplegic homolog 8
           protein (sma8 gene)
          Length = 1978

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 291 cagcttcttcacgagggaatc 311
           |||||||||||||||||||||
Sbjct: 283 cagcttcttcacgagggaatc 263
to top
>emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chromosome X, complete
             sequence
          Length = 223392

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 309   atccctcttctccatcaacgc 329
             |||||||||||||||||||||
Sbjct: 95628 atccctcttctccatcaacgc 95648
to top
>emb|CR761261.2| Xenopus tropicalis finished cDNA, clone TEgg142n01
          Length = 547

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 403 aggtttctttttgcctccttc 423
           |||||||||||||||||||||
Sbjct: 39  aggtttctttttgcctccttc 19
to top
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete
             sequence
          Length = 308317

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 406   tttctttttgcctccttcacttggc 430
             ||||||||||| |||||||||||||
Sbjct: 65100 tttctttttgcgtccttcacttggc 65124
to top
>emb|AL954341.14| Mouse DNA sequence from clone RP23-213D14 on chromosome 2, complete
              sequence
          Length = 178273

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 196    ttctatctgttccagccacga 216
              |||||||||||||||||||||
Sbjct: 159400 ttctatctgttccagccacga 159420
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 329     cggggtcctcgtccagcatc 348
               ||||||||||||||||||||
Sbjct: 2097949 cggggtcctcgtccagcatc 2097968
to top
>gb|DQ205538.1| Bos taurus prion protein (PRNP) and prion-like protein doppel (PRND)
             genes, complete cds; PRNT (PRNT) gene, exons 1 and 2; and
             putative protein gene, complete cds
          Length = 104027

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 72471 catcagatcagatcagatca 72490
to top
>ref|NM_001035415.1| Bos taurus enoyl Coenzyme A hydratase domain containing 1 isoform 2
           (ECHDC1), mRNA
          Length = 2343

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 catcagatcagatcagatca 242
           ||||||||||||||||||||
Sbjct: 950 catcagatcagatcagatca 969
to top
>ref|XM_467718.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1727

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  atcagatcagatcagatcat 243
            ||||||||||||||||||||
Sbjct: 1450 atcagatcagatcagatcat 1431
to top
>gb|BT021498.1| Bos taurus enoyl Coenzyme A hydratase domain containing 1 (ECHDC1),
           mRNA, complete cds
          Length = 2343

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 catcagatcagatcagatca 242
           ||||||||||||||||||||
Sbjct: 950 catcagatcagatcagatca 969
to top
>gb|AC150574.2| Bos taurus  BAC CH240-237H4 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 142758

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 60722 catcagatcagatcagatca 60741



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 44957 catcagatcagatcagatca 44976
to top
>gb|AC150515.3| Bos taurus  BAC CH240-118E9 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 171213

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 98855 catcagatcagatcagatca 98836
to top
>gb|AC151060.4| Bos taurus  BAC CH240-293H4 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 160650

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 69603 catcagatcagatcagatca 69584
to top
>gb|AC150871.4| Bos taurus  BAC CH240-316E7 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 167244

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    catcagatcagatcagatca 242
              ||||||||||||||||||||
Sbjct: 105424 catcagatcagatcagatca 105443
to top
>gb|AC149778.2| Bos taurus  BAC CH240-9E7 (Children's Hospital Oakland Research Institute
              Bovine BAC Library (male)) complete sequence
          Length = 138869

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    catcagatcagatcagatca 242
              ||||||||||||||||||||
Sbjct: 114655 catcagatcagatcagatca 114636
to top
>gb|AC150548.2| Bos taurus  BAC CH240-72J19 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 176133

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 92729 catcagatcagatcagatca 92710
to top
>gb|AY944236.1| Bos taurus prion preproprotein (PRNP) and prion-like protein doppel
             preproprotein (PRND) genes, complete cds; and RASSF2 gene,
             complete sequence
          Length = 207929

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 84738 catcagatcagatcagatca 84757
to top
>gb|AC091728.2| Bos taurus clone RP42-99M11, complete sequence
          Length = 162743

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    catcagatcagatcagatca 242
              ||||||||||||||||||||
Sbjct: 114823 catcagatcagatcagatca 114804
to top
>gb|AC090976.2| Bos taurus clone RP42-400M23, complete sequence
          Length = 159952

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    catcagatcagatcagatca 242
              ||||||||||||||||||||
Sbjct: 123040 catcagatcagatcagatca 123021
to top
>gb|AC146269.3| Pan troglodytes BAC clone RP43-29B18 from 7, complete sequence
          Length = 178898

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 52072 catcagatcagatcagatca 52091
to top
>gb|AC136621.2| Homo sapiens chromosome 16 clone RP11-481F24, complete sequence
          Length = 186021

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 451   atcgtgttcctcaatgtatc 470
             ||||||||||||||||||||
Sbjct: 83069 atcgtgttcctcaatgtatc 83050
to top
>gb|AC026802.9| Homo sapiens chromosome 16 clone CTD-2545G24, complete sequence
          Length = 188923

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 451   atcgtgttcctcaatgtatc 470
             ||||||||||||||||||||
Sbjct: 65142 atcgtgttcctcaatgtatc 65161
to top
>gb|AY154895.1| Bos taurus alpha-S1 casein gene and alpha-S1 casein-beta casein
             intergenic spacer region, partial sequence
          Length = 19620

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 12994 catcagatcagatcagatca 13013



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 223  catcagatcagatcagatca 242
            ||||||||||||||||||||
Sbjct: 9721 catcagatcagatcagatca 9740
to top
>gb|AF252492.1| Bos taurus clone MNB-80 microsatellite sequence
          Length = 341

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 catcagatcagatcagatca 242
           ||||||||||||||||||||
Sbjct: 59  catcagatcagatcagatca 40
to top
>emb|AL445563.1|MPULM01 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 1/3
          Length = 327650

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    catcatctgcatcaatataa 37
             ||||||||||||||||||||
Sbjct: 78965 catcatctgcatcaatataa 78984
to top
>emb|AL138972.1|DMBR25B3 Drosophila melanogaster BAC clone BACR25B3
          Length = 154329

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    atcagatcagatcagatcat 243
              ||||||||||||||||||||
Sbjct: 147398 atcagatcagatcagatcat 147417
to top
>emb|AL662921.10| Mouse DNA sequence from clone RP23-397K10 on chromosome 11 Contains a CpG
              island, complete sequence
          Length = 141754

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 398    tgagcaggtttctttttgcc 417
              ||||||||||||||||||||
Sbjct: 127432 tgagcaggtttctttttgcc 127413
to top
>emb|BX950184.7| Zebrafish DNA sequence from clone CH211-103O12 in linkage group 12,
             complete sequence
          Length = 150475

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 94858 catcagatcagatcagatca 94877
to top
>emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on chromosome 13 Contains part
              of the gene for a novel protein similar to axonemal dynein
              heavy polypeptide (DNAH), complete sequence
          Length = 127451

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 354    cagctgctttttctctttgcttcc 377
              ||||| ||||||||||||||||||
Sbjct: 105357 cagcttctttttctctttgcttcc 105334
to top
>gb|AC007602.6| Homo sapiens chromosome 16 clone RP11-2D4, complete sequence
          Length = 167094

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 451    atcgtgttcctcaatgtatc 470
              ||||||||||||||||||||
Sbjct: 131569 atcgtgttcctcaatgtatc 131588
to top
>gb|AC151605.2| Emiliania huxleyi clone JGIACCU-13A3, complete sequence
          Length = 36153

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 337   tcgtccagcatcgcgctcag 356
             ||||||||||||||||||||
Sbjct: 33038 tcgtccagcatcgcgctcag 33057
to top
>gb|AC104140.5| Drosophila melanogaster X BAC RP98-9H13 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 191342

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    atcagatcagatcagatcat 243
              ||||||||||||||||||||
Sbjct: 102610 atcagatcagatcagatcat 102629
to top
>ref|NM_166946.1| Drosophila melanogaster egghead CG9659-RB, transcript variant B
            (egh), mRNA
          Length = 2795

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  atcagatcagatcagatcat 243
            ||||||||||||||||||||
Sbjct: 2400 atcagatcagatcagatcat 2419
to top
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 224     atcagatcagatcagatcat 243
               ||||||||||||||||||||
Sbjct: 1938130 atcagatcagatcagatcat 1938111
to top
>gb|U21218.1|DMU21218 Drosophila melanogaster zeste-white 4 gene, complete cds
          Length = 4484

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  atcagatcagatcagatcat 243
            ||||||||||||||||||||
Sbjct: 4345 atcagatcagatcagatcat 4364
to top
>ref|NM_080313.2| Drosophila melanogaster egghead CG9659-RC, transcript variant C
            (egh), mRNA
          Length = 3575

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  atcagatcagatcagatcat 243
            ||||||||||||||||||||
Sbjct: 3180 atcagatcagatcagatcat 3199
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>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0019D17, from chromosome 3, complete sequence
          Length = 129658

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   atcagatcagatcagatcat 243
             ||||||||||||||||||||
Sbjct: 96238 atcagatcagatcagatcat 96257
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>gb|AC074044.8| Homo sapiens 3q BAC RP11-484K9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 194006

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 352    ctcagctgctttttctcttt 371
              ||||||||||||||||||||
Sbjct: 140189 ctcagctgctttttctcttt 140208
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>gb|AC008948.8| Homo sapiens chromosome 5 clone CTD-2333K2, complete sequence
          Length = 176656

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 219   agtccatcagatcagatcagatca 242
             |||| |||||||||||||||||||
Sbjct: 49549 agtcaatcagatcagatcagatca 49526
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>gb|BC105549.1| Bos taurus enoyl Coenzyme A hydratase domain containing 1 isoform
           2, mRNA (cDNA clone MGC:129066 IMAGE:8121607), complete
           cds
          Length = 2194

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 catcagatcagatcagatca 242
           ||||||||||||||||||||
Sbjct: 951 catcagatcagatcagatca 970
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>gb|U15731.2|BTU15731 Bos taurus somatotropin receptor gene, exon 1 and liver-specific
             promoter region
          Length = 25688

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 23986 catcagatcagatcagatca 23967
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>gb|AC134864.5| Mus musculus BAC clone RP24-132O18 from chromosome 15, complete
             sequence
          Length = 149797

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   ttgcctccttcacttggcag 432
             ||||||||||||||||||||
Sbjct: 92938 ttgcctccttcacttggcag 92919
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>gb|AC025972.6|AC025972 Homo sapiens chromosome 11, clone RP11-6K5, complete sequence
          Length = 165962

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   atcagatcagatcagatcat 243
             ||||||||||||||||||||
Sbjct: 87536 atcagatcagatcagatcat 87517
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 224      atcagatcagatcagatcat 243
                ||||||||||||||||||||
Sbjct: 31019851 atcagatcagatcagatcat 31019832
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 222      ccatcagatcagatcagatc 241
                ||||||||||||||||||||
Sbjct: 31163804 ccatcagatcagatcagatc 31163823
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>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0014K08
          Length = 177263

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   ccatcagatcagatcagatc 241
             ||||||||||||||||||||
Sbjct: 90149 ccatcagatcagatcagatc 90168
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>gb|AF233288.1| Drosophila melanogaster WDS (wds) and egghead (egh) genes, complete cds
          Length = 18142

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   atcagatcagatcagatcat 243
             ||||||||||||||||||||
Sbjct: 16078 atcagatcagatcagatcat 16097
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>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0516G10
          Length = 148937

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   atcagatcagatcagatcat 243
             ||||||||||||||||||||
Sbjct: 74807 atcagatcagatcagatcat 74788
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>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0585G03
          Length = 173649

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  atcagatcagatcagatcat 243
            ||||||||||||||||||||
Sbjct: 9075 atcagatcagatcagatcat 9056
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>dbj|AK107872.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-C09, full
           insert sequence
          Length = 474

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 ccatcagatcagatcagatc 241
           ||||||||||||||||||||
Sbjct: 377 ccatcagatcagatcagatc 358
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>dbj|AK071385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092C13, full
            insert sequence
          Length = 1726

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  atcagatcagatcagatcat 243
            ||||||||||||||||||||
Sbjct: 1449 atcagatcagatcagatcat 1430
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>gb|AY325816.1| Zea mays BAC clone Z013I05, complete sequence
          Length = 152337

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    atcagatcagatcagatcat 243
              ||||||||||||||||||||
Sbjct: 119917 atcagatcagatcagatcat 119898
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>gb|AF464738.1| Zea mays cultivar B73 putative gag protein, putative gag-pol precursor,
             putative transposase, putative copia-type pol polyprotein,
             putative copia-like retrotransposon Hopscotch polyprotein,
             putative gag protein, putative prpol, putative prpol,
             putative pol protein, putative pol protein, putative gag
             protein, and teosinte branched1 protein genes, complete
             cds
          Length = 130843

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   atcagatcagatcagatcat 243
             ||||||||||||||||||||
Sbjct: 31799 atcagatcagatcagatcat 31780
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>emb|AL928816.2| Zebrafish DNA sequence from clone BUSM1-265N4, complete sequence
          Length = 98918

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 36009 catcagatcagatcagatca 35990
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>tpe|BN000291.1|BTA000291 TPA: TPA_exp: Bos taurus prp gene for prion protein
          Length = 78056

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 72473 catcagatcagatcagatca 72492
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>gb|AE003424.2| Drosophila melanogaster chromosome X, section 8 of 74 of the complete
              sequence
          Length = 274777

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    atcagatcagatcagatcat 243
              ||||||||||||||||||||
Sbjct: 239078 atcagatcagatcagatcat 239097
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>emb|AJ298878.1|BTA298878 Bos taurus prp gene for prion protein
          Length = 78056

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 72473 catcagatcagatcagatca 72492
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>gb|U15602.1|DMU15602 Drosophila melanogaster (zeste-white 4) mRNA, complete cds
          Length = 3500

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  atcagatcagatcagatcat 243
            ||||||||||||||||||||
Sbjct: 3104 atcagatcagatcagatcat 3123
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>emb|AL831725.5| Mouse DNA sequence from clone RP23-106P7 on chromosome X, complete
             sequence
          Length = 174712

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 353   tcagctgctttttctctttgcttc 376
             |||||| |||||||||||||||||
Sbjct: 36278 tcagcttctttttctctttgcttc 36255
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>emb|AJ421481.1| Bos taurus X-inactivation center region, Jpx and Xist genes
          Length = 233345

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   catcagatcagatcagatca 242
             ||||||||||||||||||||
Sbjct: 26544 catcagatcagatcagatca 26563


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,287,465
Number of Sequences: 3902068
Number of extensions: 4287465
Number of successful extensions: 85685
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85001
Number of HSP's gapped (non-prelim): 585
length of query: 516
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 493
effective length of database: 17,143,297,704
effective search space: 8451645768072
effective search space used: 8451645768072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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