ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6m23 |
|---|---|
| Clone Library Name | barley_pub |
>MPPB_ARATH (Q42290) Probable mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 531 Score = 160 bits (404), Expect = 5e-39 Identities = 76/112 (67%), Positives = 97/112 (86%) Frame = -1 Query: 719 AFAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPE 540 ++AIM E++KL+YRV++ DV RARNQLKSS+ LH+DG++ + EDIGRQ L YGRRIP E Sbjct: 420 SYAIMYEVTKLAYRVSDADVTRARNQLKSSLLLHMDGTSPIAEDIGRQLLTYGRRIPTAE 479 Query: 539 LFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 384 LFARIDAVD ST++RVAN++I+D+DIAI+A+GPI+ LPDYN FRRRTY RY Sbjct: 480 LFARIDAVDASTVKRVANKYIYDKDIAISAIGPIQDLPDYNKFRRRTYWNRY 531
>MPPB_MOUSE (Q9CXT8) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52) Length = 489 Score = 115 bits (288), Expect = 1e-25 Identities = 57/98 (58%), Positives = 72/98 (73%) Frame = -1 Query: 710 IMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFA 531 + E +L VTE +V RA+N LK+++ L LDGST + EDIGRQ L Y RRIPIPEL A Sbjct: 381 VQNEWKRLCTDVTESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEA 440 Query: 530 RIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYN 417 RIDAVD T+RRV ++I D+ AIAA+GPI+ LPD+N Sbjct: 441 RIDAVDAETVRRVCTKYIHDKSPAIAALGPIERLPDFN 478
>MPPB_HUMAN (O75439) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52) Length = 489 Score = 114 bits (286), Expect = 2e-25 Identities = 59/108 (54%), Positives = 75/108 (69%) Frame = -1 Query: 710 IMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFA 531 + +E +L VTE +V RARN LK+++ L LDGST + EDIGRQ L Y RRIPIPEL A Sbjct: 381 VQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEA 440 Query: 530 RIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLR 387 RIDAV+ TIR V ++I+++ AIAA+GPIK LPD+ R LR Sbjct: 441 RIDAVNAETIREVCTKYIYNRSPAIAAVGPIKQLPDFKQIRSNMCWLR 488
>MPPB_BOVIN (Q3SZ71) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 490 Score = 110 bits (276), Expect = 3e-24 Identities = 54/98 (55%), Positives = 72/98 (73%) Frame = -1 Query: 710 IMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFA 531 + +E +L VTE +V RA+N LK+++ L LDGST + EDIGRQ L Y RRIPIPEL A Sbjct: 382 VQKEWMRLCTSVTESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEA 441 Query: 530 RIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYN 417 RIDAV+ IR V ++I+D+ A+AA+GPI+ LPD+N Sbjct: 442 RIDAVNAEIIREVCTKYIYDKSPAVAAVGPIEQLPDFN 479
>MPPB_RAT (Q03346) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52) Length = 489 Score = 110 bits (275), Expect = 4e-24 Identities = 54/99 (54%), Positives = 72/99 (72%) Frame = -1 Query: 713 AIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELF 534 A+ +E +L V+E +V RA+N LK+++ L LDGST + EDIGRQ L Y RRIPIPEL Sbjct: 380 AVQKEWMRLCTAVSESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELE 439 Query: 533 ARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYN 417 ARIDAVD +R V ++I+ + AIAA+GPI+ LPD+N Sbjct: 440 ARIDAVDAEMVREVCTKYIYGKSPAIAALGPIERLPDFN 478
>MPPB_PONPY (Q5REK3) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 489 Score = 110 bits (275), Expect = 4e-24 Identities = 55/97 (56%), Positives = 72/97 (74%) Frame = -1 Query: 710 IMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFA 531 + +E +L VTE +V RARN LK+++ L LDGST + EDIGRQ L Y RRIPIPEL A Sbjct: 381 VQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEA 440 Query: 530 RIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDY 420 RIDAV+ TIR V ++I+++ AIAA+GPI+ LPD+ Sbjct: 441 RIDAVNAETIREVCTKYIYNRSPAIAAVGPIEQLPDF 477
>MPPB_BLAEM (Q00302) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (BeMPP1) Length = 465 Score = 101 bits (252), Expect = 2e-21 Identities = 51/108 (47%), Positives = 74/108 (68%) Frame = -1 Query: 707 MQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFAR 528 ++E +L+ +E +V A+ QLK+S+ L LDG+T V E+IGRQ L YGRR+ E+ Sbjct: 358 VREWMRLATAPSEGEVAIAKQQLKTSLLLALDGTTPVAEEIGRQMLAYGRRLSPFEIDRL 417 Query: 527 IDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 384 +DAV ++RVAN FI+D+D+AI A+GP++ LPDYN R +LRY Sbjct: 418 VDAVTVEDVKRVANEFIYDRDLAIVAVGPVECLPDYNRIRSAMNLLRY 465
>UQCR1_HUMAN (P31930) Ubiquinol-cytochrome-c reductase complex core protein I,| mitochondrial precursor (EC 1.10.2.2) Length = 480 Score = 101 bits (251), Expect = 3e-21 Identities = 49/111 (44%), Positives = 71/111 (63%) Frame = -1 Query: 716 FAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPEL 537 F + + +L TE +V R +N L++++ HLDG+T V EDIGR L YGRRIP+ E Sbjct: 370 FVLQGQWMRLCTSATESEVARGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEW 429 Query: 536 FARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 384 +RI VD S +R + +++I+DQ A+A GPI+ LPDYN R + LR+ Sbjct: 430 ESRIAEVDASVVREICSKYIYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 480
>UQCR1_BOVIN (P31800) Ubiquinol-cytochrome-c reductase complex core protein I,| mitochondrial precursor (EC 1.10.2.2) Length = 480 Score = 100 bits (248), Expect = 6e-21 Identities = 48/111 (43%), Positives = 70/111 (63%) Frame = -1 Query: 716 FAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPEL 537 F + + +L TE +V+R +N L++++ HLDG+T V EDIGR L YGRRIP+ E Sbjct: 370 FVLQGQWMRLCTSATESEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEW 429 Query: 536 FARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 384 +RI VD +R V +++ +DQ A+A GPI+ LPDYN R + LR+ Sbjct: 430 ESRIAEVDARVVREVCSKYFYDQCPAVAGFGPIEQLPDYNRIRSGMFWLRF 480
>UQCR1_MOUSE (Q9CZ13) Ubiquinol-cytochrome-c reductase complex core protein I,| mitochondrial precursor (EC 1.10.2.2) Length = 480 Score = 96.7 bits (239), Expect = 6e-20 Identities = 47/111 (42%), Positives = 69/111 (62%) Frame = -1 Query: 716 FAIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPEL 537 F + + +L TE +V R +N L++++ HLDG+T V EDIGR L YGRRIP+ E Sbjct: 370 FFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEW 429 Query: 536 FARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 384 +RI VD +R + +++ +DQ A+A GPI+ LPDYN R + LR+ Sbjct: 430 ESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 480
>MPPB_NEUCR (P11913) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (Ubiquinol-cytochrome-c reductase complex core protein I) (EC 1.10.2.2) Length = 476 Score = 85.1 bits (209), Expect = 2e-16 Identities = 48/96 (50%), Positives = 66/96 (68%) Frame = -1 Query: 707 MQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFAR 528 ++E ++L V+E +V RA+ QLK+SI L LDG+TAV EDIGRQ + GRR+ E+ Sbjct: 369 LREWTRLCSNVSEAEVERAKAQLKASILLSLDGTTAVAEDIGRQIVTTGRRMSPAEIERI 428 Query: 527 IDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDY 420 IDAV + AN+ I+DQDIAI+A+G I+ L DY Sbjct: 429 IDAVSAKDVMDFANKKIWDQDIAISAVGSIEGLFDY 464
>MPPB_LENED (Q9Y8B5) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 466 Score = 84.7 bits (208), Expect = 3e-16 Identities = 44/108 (40%), Positives = 69/108 (63%) Frame = -1 Query: 707 MQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFAR 528 ++E +++S TE +V RA++QLK+ + L LDG+TAV EDIGRQ + G+R+ ++ Sbjct: 359 LKEWTRMSIAPTEGEVERAKSQLKAGLLLSLDGTTAVAEDIGRQIVTSGKRMTPAQIENA 418 Query: 527 IDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 384 +DAV I+RVA ++++D+D A+AA G I L DY R + Y Sbjct: 419 VDAVSVDDIKRVAQKYLWDKDFALAAFGNIDGLKDYGRIRNDMSSMLY 466
>MPPB_SCHPO (Q9P7X1) Probable mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP) Length = 457 Score = 79.7 bits (195), Expect = 8e-15 Identities = 45/108 (41%), Positives = 68/108 (62%) Frame = -1 Query: 707 MQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFAR 528 +Q ++L+ T +V RA+ QL++S+ L LD +TA+ EDIGRQ L GRR+ E+ R Sbjct: 351 LQNWARLTV-ATRAEVERAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRRMSPQEVDLR 409 Query: 527 IDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 384 I + + RVA+ I+D+DIA++A+G I+ L DYN R M R+ Sbjct: 410 IGQITEKDVARVASEMIWDKDIAVSAVGSIEGLLDYNRIRSSISMNRW 457
>MPPB_YEAST (P10507) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP) Length = 462 Score = 69.7 bits (169), Expect = 8e-12 Identities = 35/104 (33%), Positives = 68/104 (65%), Gaps = 1/104 (0%) Frame = -1 Query: 710 IMQEMSKL-SYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELF 534 I++E ++ S ++++ +V RA+ QLK+++ L LDGSTA+VEDIGRQ + G+R+ E+F Sbjct: 356 ILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVF 415 Query: 533 ARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRR 402 ++D + I AN + ++ +++ A+G T+P+ ++ + Sbjct: 416 EQVDKITKDDIIMWANYRLQNKPVSMVALGNTSTVPNVSYIEEK 459
>UQCR1_EUGGR (P43264) Ubiquinol-cytochrome-c reductase complex core protein I,| mitochondrial precursor (EC 1.10.2.2) Length = 494 Score = 69.3 bits (168), Expect = 1e-11 Identities = 32/80 (40%), Positives = 51/80 (63%) Frame = -1 Query: 707 MQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFAR 528 M+E+ ++S ++EE+ RA+NQLK L LDG+T + +DIGRQ L +G R+P+ F + Sbjct: 369 MRELIRVSRNISEEEFERAKNQLKLQTMLQLDGTTNIADDIGRQVLSFGARVPLASFFEQ 428 Query: 527 IDAVDPSTIRRVANRFIFDQ 468 +DA+ + RV R + Q Sbjct: 429 LDAISREDLIRVGPRVLLRQ 448
>MPPA_YEAST (P11914) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 482 Score = 67.8 bits (164), Expect = 3e-11 Identities = 34/79 (43%), Positives = 55/79 (69%) Frame = -1 Query: 680 RVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTI 501 R+TE++V RA+NQLKSS+ ++L+ +ED+GRQ L++GR+IP+ E+ ++I+ + P I Sbjct: 361 RLTEDEVSRAKNQLKSSLLMNLESKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDI 420 Query: 500 RRVANRFIFDQDIAIAAMG 444 RVA IF ++ A G Sbjct: 421 SRVA-EMIFTGNVNNAGNG 438
>UQCR1_YEAST (P07256) Ubiquinol-cytochrome-c reductase complex core protein I,| mitochondrial precursor (EC 1.10.2.2) Length = 457 Score = 58.9 bits (141), Expect = 1e-08 Identities = 38/112 (33%), Positives = 66/112 (58%), Gaps = 4/112 (3%) Frame = -1 Query: 707 MQEMSKLSYRVTEEDVIRARNQLKSSI-QLHLDGSTAVVED---IGRQQLIYGRRIPIPE 540 +++ ++L+ VT+ +V RA++ LK + QL+ G+ V D +G + LI G ++ + E Sbjct: 348 LKQWNRLTISVTDTEVERAKSLLKLQLGQLYESGNP--VNDANLLGAEVLIKGSKLSLGE 405 Query: 539 LFARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRRTYMLRY 384 F +IDA+ ++ A + ++DQDIAIA G I+ L DY R M+R+ Sbjct: 406 AFKKIDAITVKDVKAWAGKRLWDQDIAIAGTGQIEGLLDYMRIRSDMSMMRW 457
>MPPA_NEUCR (P23955) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 577 Score = 58.5 bits (140), Expect = 2e-08 Identities = 27/65 (41%), Positives = 45/65 (69%) Frame = -1 Query: 671 EEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIRRV 492 E +V RA+NQL+SS+ ++L+ +ED+GRQ ++GR+IP+ E+ RI+ + +RRV Sbjct: 465 ELEVSRAKNQLRSSLLMNLESRMVELEDLGRQVQVHGRKIPVREMTRRINELTVKDLRRV 524 Query: 491 ANRFI 477 A R + Sbjct: 525 AKRVV 529
>MPPA_SCHPO (O94745) Probable mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 494 Score = 55.8 bits (133), Expect = 1e-07 Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 1/79 (1%) Frame = -1 Query: 710 IMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQ-QLIYGRRIPIPELF 534 I++E+ VT E+ RA+NQLKSS+ ++L+ +ED+GRQ Q G I E+ Sbjct: 377 IIRELCNTVLSVTSEETERAKNQLKSSLLMNLESRMISLEDLGRQIQTQNGLYITPKEMI 436 Query: 533 ARIDAVDPSTIRRVANRFI 477 +IDA+ PS + RVA R + Sbjct: 437 EKIDALTPSDLSRVARRVL 455
>MPPA_BLAEM (P97997) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 474 Score = 55.1 bits (131), Expect = 2e-07 Identities = 32/93 (34%), Positives = 49/93 (52%) Frame = -1 Query: 701 EMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARID 522 E ++ +++E+V RA+NQLKSS+ ++L+ VEDIGRQ L +R+ EL I Sbjct: 353 EFVHMARNLSDEEVARAKNQLKSSLLMNLESQVITVEDIGRQVLAQNQRLEPLELVNNIS 412 Query: 521 AVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPD 423 AV + RVA + +A + L D Sbjct: 413 AVTRDDLVRVAEALVAKPPTMVAVGEDLTKLTD 445
>YMT1_CAEEL (P98080) Hypothetical protein F56D2.1 in chromosome III| Length = 471 Score = 54.7 bits (130), Expect = 3e-07 Identities = 27/98 (27%), Positives = 52/98 (53%) Frame = -1 Query: 713 AIMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELF 534 ++ E L+ TEE+V A+NQ ++++ +L+ +T ++ L G + EL Sbjct: 362 SVAHEWKHLASAATEEEVAMAKNQFRTNLYQNLETNTQKAGFNAKELLYTGNLRQLSELE 421 Query: 533 ARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDY 420 A+I VD +R +R ++D+D+A +G + P+Y Sbjct: 422 AQIQKVDAGAVREAISRHVYDRDLAAVGVGRTEAFPNY 459
>MPPA_SOLTU (P29677) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) Length = 504 Score = 54.3 bits (129), Expect = 4e-07 Identities = 30/87 (34%), Positives = 45/87 (51%) Frame = -1 Query: 677 VTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIR 498 V + + RA+ KS+I ++L+ EDIGRQ L YG R P+ IDAV I Sbjct: 410 VDQVQLNRAKQATKSAILMNLESRMVASEDIGRQLLTYGERNPVEHFLKAIDAVSAKDIA 469 Query: 497 RVANRFIFDQDIAIAAMGPIKTLPDYN 417 V + I + +A+ G + +LP Y+ Sbjct: 470 SVVQKLI-SSPLTMASYGDVLSLPSYD 495
>MPPA_PONPY (Q5R513) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 525 Score = 50.8 bits (120), Expect = 4e-06 Identities = 32/97 (32%), Positives = 52/97 (53%) Frame = -1 Query: 710 IMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFA 531 I +E +S V ++ RA+ QL S + ++L+ + ED+GRQ L R EL Sbjct: 408 ITKEFILMSGTVDAVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCT 467 Query: 530 RIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDY 420 I V P ++RVA++ + + A+AA+G + LP Y Sbjct: 468 LIRNVKPEDVKRVASKMLRGKP-AVAALGDLTDLPTY 503
>Y5738_STRCO (O86835) Hypothetical zinc protease SCO5738 (EC 3.4.99.-)| Length = 459 Score = 50.4 bits (119), Expect = 5e-06 Identities = 25/81 (30%), Positives = 52/81 (64%) Frame = -1 Query: 677 VTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIR 498 +T++++ RA QL+ S L L+ + A++ IG+ +L +G ++ + ++ ARI +V P +R Sbjct: 368 LTDDEIGRAVGQLQGSTVLGLEDTGALMNRIGKSELCWGEQMSVDDMLARIASVTPDDVR 427 Query: 497 RVANRFIFDQDIAIAAMGPIK 435 VA R + + +++ +GP+K Sbjct: 428 AVA-RDVLGRRPSLSVIGPLK 447
>MPPA_RAT (P20069) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (P-55) Length = 524 Score = 50.4 bits (119), Expect = 5e-06 Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 1/98 (1%) Frame = -1 Query: 710 IMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQL-IYGRRIPIPELF 534 I +E + V ++ RA+ QL S + ++L+ + ED+GRQ L + R++P EL Sbjct: 407 ITKEFILMGRTVDLVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLP-HELC 465 Query: 533 ARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDY 420 I V P I+RVA++ + + A+AA+G + LP Y Sbjct: 466 TLIRNVKPEDIKRVASKMLRGKP-AVAALGDLTDLPTY 502
>MPPA_MOUSE (Q9DC61) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (P-55) Length = 524 Score = 50.4 bits (119), Expect = 5e-06 Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 1/98 (1%) Frame = -1 Query: 710 IMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQL-IYGRRIPIPELF 534 I +E + V ++ RA+ QL S + ++L+ + ED+GRQ L + R++P EL Sbjct: 407 ITKEFILMGRTVDLVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLP-HELC 465 Query: 533 ARIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDY 420 I V P I+RVA++ + + A+AA+G + LP Y Sbjct: 466 TLIRNVKPEDIKRVASKMLRGKP-AVAALGDLTDLPTY 502
>MPPA_HUMAN (Q10713) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (P-55) Length = 525 Score = 49.3 bits (116), Expect = 1e-05 Identities = 31/97 (31%), Positives = 51/97 (52%) Frame = -1 Query: 710 IMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFA 531 I +E + V ++ RA+ QL S + ++L+ + ED+GRQ L R EL Sbjct: 408 ITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCT 467 Query: 530 RIDAVDPSTIRRVANRFIFDQDIAIAAMGPIKTLPDY 420 I V P ++RVA++ + + A+AA+G + LP Y Sbjct: 468 LIRNVKPEDVKRVASKMLRGKP-AVAALGDLTDLPTY 503
>Y293_RICCN (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-)| Length = 412 Score = 48.9 bits (115), Expect = 2e-05 Identities = 27/90 (30%), Positives = 52/90 (57%) Frame = -1 Query: 710 IMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFA 531 I E+ K++ +V+ E+++RA+ QL+S++Q+ + +T E+IG+ ++G+ I E+ Sbjct: 318 IKNEIIKMTEQVSTEEILRAKTQLRSNLQMAQEKNTYKSEEIGKNYSVFGQYISPEEIME 377 Query: 530 RIDAVDPSTIRRVANRFIFDQDIAIAAMGP 441 I ++ I AN+ IF A +GP Sbjct: 378 IIMSIKADDIINTANK-IFSGTTTSAIIGP 406
>Y219_RICPR (O05945) Hypothetical zinc protease RP219 (EC 3.4.99.-)| Length = 412 Score = 48.5 bits (114), Expect = 2e-05 Identities = 28/90 (31%), Positives = 51/90 (56%) Frame = -1 Query: 710 IMQEMSKLSYRVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFA 531 I E+ K++ V+ E++IRA+ QL+S++Q+ + +T E+IG+ ++G+ I E+ Sbjct: 318 IKNEIIKITETVSTEEIIRAKMQLRSNLQMAQEQNTYKSEEIGKNYSVFGKYILPEEIIE 377 Query: 530 RIDAVDPSTIRRVANRFIFDQDIAIAAMGP 441 I + I AN+ IF +A +GP Sbjct: 378 IITNIRADDIINTANK-IFSGTTTLAIIGP 406
>MPPA2_ARATH (O04308) Probable mitochondrial-processing peptidase alpha subunit| 2, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 2) Length = 499 Score = 48.5 bits (114), Expect = 2e-05 Identities = 25/93 (26%), Positives = 48/93 (51%) Frame = -1 Query: 680 RVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTI 501 +V ++ + RA+ KS+I ++L+ EDIGRQ L YG R P+ + +D + I Sbjct: 406 KVNQKHLDRAKAATKSAILMNLESRMIAAEDIGRQILTYGERKPVDQFLKTVDQLTLKDI 465 Query: 500 RRVANRFIFDQDIAIAAMGPIKTLPDYNWFRRR 402 ++ + + + +A G + +P Y+ +R Sbjct: 466 ADFTSK-VITKPLTMATFGDVLNVPSYDSVSKR 497
>MPPA1_ARATH (Q9ZU25) Probable mitochondrial-processing peptidase alpha subunit| 1, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 1) Length = 503 Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 2/90 (2%) Frame = -1 Query: 680 RVTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTI 501 +V + + RA+ KS++ ++L+ EDIGRQ L YG R P+ + + +VD T+ Sbjct: 410 KVNQAHLDRAKAATKSAVLMNLESRMIAAEDIGRQILTYGERKPVDQF---LKSVDQLTL 466 Query: 500 RRVAN--RFIFDQDIAIAAMGPIKTLPDYN 417 + +A+ + + + + + G + +P Y+ Sbjct: 467 KDIADFTSKVISKPLTMGSFGDVLAVPSYD 496
>UQCR2_RAT (P32551) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 452 Score = 41.2 bits (95), Expect = 0.003 Identities = 20/67 (29%), Positives = 38/67 (56%) Frame = -1 Query: 677 VTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIR 498 ++ DV A+N+LK+ + ++ S + +IG Q L G +P P + +IDAV + + Sbjct: 365 LSSADVQAAKNKLKAGYLMSVETSEGFLSEIGSQALATGSYMPPPTVLQQIDAVADADVV 424 Query: 497 RVANRFI 477 + A +F+ Sbjct: 425 KAAKKFV 431
>UQCR2_MOUSE (Q9DB77) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 453 Score = 37.7 bits (86), Expect = 0.036 Identities = 22/84 (26%), Positives = 45/84 (53%) Frame = -1 Query: 677 VTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIR 498 ++ DV A+N+LK+ + ++ S + +IG Q L G +P + +ID+V + + Sbjct: 366 LSSADVQAAKNKLKAGYLMSVETSEGFLSEIGSQALAAGSYMPPSTVLQQIDSVADADVV 425 Query: 497 RVANRFIFDQDIAIAAMGPIKTLP 426 + A +F+ + ++AA G + P Sbjct: 426 KAAKKFVSGKK-SMAASGNLGHTP 448
>Y855_MYCLE (O32965) Hypothetical zinc protease ML0855 (EC 3.4.99.-)| Length = 445 Score = 37.4 bits (85), Expect = 0.047 Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 3/87 (3%) Frame = -1 Query: 677 VTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIR 498 +TE + A+ L+ I L L+ S + + +GR +L YG+ I +ID V + Sbjct: 352 ITEAECRIAKGSLRGGIILGLEDSNSWMSRLGRSELNYGKYRGIEHTLQQIDEVTVEQVN 411 Query: 497 RVANRFIFDQDIAIAAMGPI---KTLP 426 +A++ + ++ A +GP KTLP Sbjct: 412 ALAHQ-LLNKRYGAAVLGPYASKKTLP 437
>Y2805_MYCBO (P0A5S9) Hypothetical zinc protease Mb2805c (EC 3.4.99.-)| Length = 438 Score = 35.8 bits (81), Expect = 0.14 Identities = 21/79 (26%), Positives = 39/79 (49%) Frame = -1 Query: 677 VTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIR 498 +TE + A+ L+ + L L+ S++ + +GR +L YG+ I +I+ V + Sbjct: 345 ITEAECGIAKGSLRGGLVLGLEDSSSRMSRLGRSELNYGKHRSIEHTLRQIEQVTVEEVN 404 Query: 497 RVANRFIFDQDIAIAAMGP 441 VA R + + A +GP Sbjct: 405 AVA-RHLLSRRYGAAVLGP 422
>Y2782_MYCTU (P0A5S8) Hypothetical zinc protease Rv2782c/MT2852 (EC 3.4.99.-)| Length = 438 Score = 35.8 bits (81), Expect = 0.14 Identities = 21/79 (26%), Positives = 39/79 (49%) Frame = -1 Query: 677 VTEEDVIRARNQLKSSIQLHLDGSTAVVEDIGRQQLIYGRRIPIPELFARIDAVDPSTIR 498 +TE + A+ L+ + L L+ S++ + +GR +L YG+ I +I+ V + Sbjct: 345 ITEAECGIAKGSLRGGLVLGLEDSSSRMSRLGRSELNYGKHRSIEHTLRQIEQVTVEEVN 404 Query: 497 RVANRFIFDQDIAIAAMGP 441 VA R + + A +GP Sbjct: 405 AVA-RHLLSRRYGAAVLGP 422
>SPG21_XENLA (Q5FVD6) Maspardin (Spastic paraplegia 21 autosomal recessive Mast| syndrome protein homolog) Length = 310 Score = 30.4 bits (67), Expect = 5.7 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -1 Query: 449 MGPIKTLPDYNWFRRRTYMLRY*IQPAVYHVYSL 348 MG IK PDYNWFR + R + V+SL Sbjct: 1 MGAIKISPDYNWFRSTVPLKRIIVDDDDSKVWSL 34
>TR95_MOUSE (Q6PGF3) Thyroid hormone receptor-associated protein complex 95 kDa| component (Trap95) (Thyroid hormone receptor-associated protein 5) (Vitamin D3 receptor-interacting protein complex component DRIP92) Length = 828 Score = 30.0 bits (66), Expect = 7.5 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = -1 Query: 284 YVPKWRNFLSLRFPCPCLPFANPQSCQ*W*ANSTDVFYDDDELSRYFSI 138 YV +W + + CP LP A SC+ A +TD+ DD +L+ I Sbjct: 5 YVCEWEKWAKSTY-CPSLPLACAWSCRNLTAFTTDLRNDDQDLTHMIHI 52
>YNS2_YEAST (P53877) Hypothetical 61.8 kDa Trp-Asp repeats-containing protein| in NPR1-RPS3 intergenic region Length = 555 Score = 30.0 bits (66), Expect = 7.5 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 14/73 (19%) Frame = +3 Query: 471 VKDEAVCNTPDSAGINCIYSRK--KLGNRNST------------AIDELLTSNILNNSSG 608 +K A+ N SAG+N + + L RNS A+ +L+ N+LN++ Sbjct: 289 LKGNAIVNLLQSAGVNTVQKGRVFSLVQRNSLTGGENEDLDALYAMGQLVCENVLNSNVS 348 Query: 609 AIKV*LDGRFQLI 647 +++ +DG LI Sbjct: 349 CLEISMDGTLLLI 361
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 29.6 bits (65), Expect = 9.7 Identities = 22/66 (33%), Positives = 29/66 (43%) Frame = +3 Query: 270 PLRHIICAWMWPYNILMPKQAIILPLQTVNMVHCWLNLVTEHVGPASEPVVVWKSLNWSH 449 PL H+I A+ P NI + P Q + V EH P+SEPV+ + L S Sbjct: 15 PLSHLINAFHSPKNISVSVNTSASPKQH-------RDTVAEHEAPSSEPVLNLRDLGLSE 67 Query: 450 GSDGNI 467 G I Sbjct: 68 LKIGQI 73
>SPG21_PONPY (Q5RES2) Maspardin (Spastic paraplegia 21 autosomal recessive Mast| syndrome protein homolog) Length = 308 Score = 29.6 bits (65), Expect = 9.7 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -1 Query: 449 MGPIKTLPDYNWFR 408 MG IK PDYNWFR Sbjct: 1 MGEIKVSPDYNWFR 14
>SPG21_MOUSE (Q9CQC8) Maspardin (Spastic paraplegia 21 autosomal recessive Mast| syndrome protein homolog) (Acid cluster protein 33) Length = 308 Score = 29.6 bits (65), Expect = 9.7 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -1 Query: 449 MGPIKTLPDYNWFR 408 MG IK PDYNWFR Sbjct: 1 MGEIKVSPDYNWFR 14
>SPG21_HUMAN (Q9NZD8) Maspardin (Spastic paraplegia 21 autosomal recessive Mast| syndrome protein) (Acid cluster protein 33) Length = 308 Score = 29.6 bits (65), Expect = 9.7 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -1 Query: 449 MGPIKTLPDYNWFR 408 MG IK PDYNWFR Sbjct: 1 MGEIKVSPDYNWFR 14
>SPG21_BOVIN (Q8MJJ1) Maspardin (Spastic paraplegia 21 autosomal recessive Mast| syndrome protein homolog) Length = 308 Score = 29.6 bits (65), Expect = 9.7 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -1 Query: 449 MGPIKTLPDYNWFR 408 MG IK PDYNWFR Sbjct: 1 MGEIKVSPDYNWFR 14
>OR10A_DROME (Q9VYZ1) Putative odorant receptor 10a| Length = 406 Score = 29.6 bits (65), Expect = 9.7 Identities = 23/56 (41%), Positives = 28/56 (50%) Frame = +2 Query: 311 YTDAKTSNHLAFADCKHGTLLVESSNGACRSCV*TSCSLEES*LVPWQRWQYPGQR 478 YT A S L + C GTL+ ESS G CR+ SC PWQ ++ P QR Sbjct: 318 YTVAALSQLLVY--CYGGTLVAESSTGLCRAMF--SC--------PWQLFK-PKQR 360
>SPG21_RAT (Q5XIC4) Maspardin (Spastic paraplegia 21 autosomal recessive Mast| syndrome protein homolog) Length = 261 Score = 29.6 bits (65), Expect = 9.7 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -1 Query: 449 MGPIKTLPDYNWFR 408 MG IK PDYNWFR Sbjct: 1 MGEIKVSPDYNWFR 14 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,253,932 Number of Sequences: 219361 Number of extensions: 2241265 Number of successful extensions: 5846 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 5640 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5839 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7366267610 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
