| Clone Name | rbags7b21 |
|---|---|
| Clone Library Name | barley_pub |
>RL23_TRYCR (Q94776) 60S ribosomal protein L23 (L17) (TCEST082)| Length = 141 Score = 31.2 bits (69), Expect = 1.4 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%) Frame = -1 Query: 468 LTAASIKTGRPQIARR---AIDLAERRLL--KDGWPEYYDGKLGKYVGKQARKFQTWSIA 304 + AS+K G+P++ R+ A+ + +R+ KDG Y++ G V Q R + IA Sbjct: 59 IVMASVKKGKPELRRKVLNAVIIRQRKSWRRKDGTVIYFEDNAGVIVNSQGRDGRVSGIA 118 Query: 303 G 301 G Sbjct: 119 G 119
>JMT_BRARP (Q9SBK6) Jasmonate O-methyltransferase (EC 2.1.1.141)| (S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase) (Floral nectary-specific protein 1) Length = 392 Score = 29.6 bits (65), Expect = 4.2 Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 6/77 (7%) Frame = +2 Query: 83 KIFRWESQNKG*AEKCYAKNSCFQS------RRCSPXXLVYQFVHEADLLKTGFIALSSS 244 ++ R NKG E YAKNS QS RR L + +++L G L S Sbjct: 2 EVMRILHMNKGNGETSYAKNSIVQSNIISLGRRVMDEALKKLMIRNSEILSFGIADLGCS 61 Query: 245 KAIIPRCEGSSSNILAT 295 P S SNI+ T Sbjct: 62 SG--PNSLLSISNIVET 76
>RNY1_ASHGO (Q75BW5) Ribonuclease T2-like precursor (EC 3.1.27.1) (RNase| T2-like) Length = 292 Score = 29.6 bits (65), Expect = 4.2 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = +1 Query: 331 CLLANIFSKFTIVILRPAILQQPPLS*VNCSSCNLRXSSFDACCREQP 474 CLL++ F +F P + P S S+C + D CC E P Sbjct: 18 CLLSHAFQEFITKFPMPMMYNFPSCSSTIPSTCRNETAIADTCCFEYP 65
>PEPQ_LACHE (O84913) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 368 Score = 29.3 bits (64), Expect = 5.5 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = -1 Query: 459 ASIKTGRPQIARRAIDLAERRLL-KDGWPEYYDGKLGKYVGKQARKF 322 A+I+ +P I +D R ++ K G+ EY+ +LG +GK ++ Sbjct: 261 AAIEAAKPGITAEELDSVARDIITKAGYGEYFIHRLGHGIGKNVHEY 307
>Y4WG_RHISN (P55685) Hypothetical 19.4 kDa protein y4wG| Length = 181 Score = 29.3 bits (64), Expect = 5.5 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = -1 Query: 342 GKQARKFQTWSIAGYLVAKMLLEDPSHLGMIAL 244 GK+ RKF+ ++ AG+ V L D S+ GM+++ Sbjct: 111 GKEERKFKPFAAAGFSVRAGLAADGSNSGMLSI 143
>MURG_HELHP (Q7U322) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 350 Score = 29.3 bits (64), Expect = 5.5 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Frame = +2 Query: 191 FVHEADLLKTGF--IALSSSKAIIPRCEGSSSNILATKYPAIDQ 316 F+HE + +K I +KAI EG S N + T YP D+ Sbjct: 118 FIHEQNAIKGKLNEILTPFAKAIFGSFEGKSKNFIHTSYPVRDE 161
>LPHN1_RAT (O88917) Latrophilin-1 precursor (Calcium-independent| alpha-latrotoxin receptor 1) (CIRL-1) Length = 1515 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -3 Query: 244 GRGQGNEASFEKVRLMDKLIHKXXRGATSGLK 149 GR + A+FEK+ ++ +L+H RGA+ G K Sbjct: 1314 GRNLADAAAFEKM-IISELVHNNLRGASGGAK 1344
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 28.5 bits (62), Expect = 9.4 Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 11/93 (11%) Frame = +3 Query: 60 SRGIQKKIKFSVGKVKTRDEQRNATRRIRVFNPDVAPLXLLCISLSMRR-----TFSKLA 224 SRG+QK FS G+ + R R A APL + L RR + S L+ Sbjct: 2127 SRGLQKSSSFSQGEAEPRGRHRRAG----------APLEIPVARLGARRLQESPSLSALS 2176 Query: 225 SLPCP------LPRLSYQDVKDPPATSWRPNTQ 305 P +P+LS +P A + R + Q Sbjct: 2177 ETQPPSPARPSVPKLSITKSPEPSAVTSRDSPQ 2209
>LPHN1_MOUSE (Q80TR1) Latrophilin-1 (Calcium-independent alpha-latrotoxin receptor| 1) (Lectomedin-2) (Fragment) Length = 1406 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -3 Query: 244 GRGQGNEASFEKVRLMDKLIHKXXRGATSGLK 149 GR + A+FEK+ ++ +L+H RGA+ G K Sbjct: 1205 GRNLADAAAFEKM-IISELVHNNLRGASGGAK 1235
>VL1_HPV26 (P36735) Major capsid protein L1| Length = 503 Score = 28.5 bits (62), Expect = 9.4 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Frame = +2 Query: 137 KNSCFQSRRCSPXXLVYQFVHEADLLKTG-----FIALSSSKAIIP 259 KN+ Q C P L+ + + D++ TG F AL ++K+ +P Sbjct: 175 KNTQTQRGDCPPLELISSIIEDGDMIDTGFGAMDFTALQATKSDVP 220
>PMPC_CHLMU (Q9PJY1) Probable outer membrane protein pmpC precursor| (Polymorphic membrane protein C) Length = 1460 Score = 28.5 bits (62), Expect = 9.4 Identities = 20/62 (32%), Positives = 26/62 (41%) Frame = -2 Query: 197 GQTDTQEX*GSNVWIENTNSSRSISLLIPCFDFPNGKFYFLLNSSAVQYLSSFIELEKKQ 18 G TD+ E +N NT S +S P PN FL S+V S I+ E + Sbjct: 308 GNTDSNESNPNNSASNNTGSENELSSSTPSAQLPNPATPFL---SSVSTNSQPIDTEPEN 364 Query: 17 LW 12 W Sbjct: 365 AW 366
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 28.5 bits (62), Expect = 9.4 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = +2 Query: 62 PRNSEENKIFRWESQNKG*AEKCYAKNSCFQSRRCSP 172 PR E+ +I WE + K K AK CF C P Sbjct: 926 PRTGEKRRILGWEERKK--IAKGAAKGLCFLHHNCIP 960
>MG44_TARMA (P40653) SRY-related protein MG44 (Fragment)| Length = 72 Score = 28.5 bits (62), Expect = 9.4 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = -1 Query: 441 RPQIARRAIDLAERRLLKDGWPEYYDGKLGKYVGKQARKFQ 319 RP A ERR + D WP+ ++ ++ K +G+ ++ Q Sbjct: 3 RPMNAFMVWSQNERRKIMDQWPDMHNAEISKSLGRSSQLLQ 43 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,760,061 Number of Sequences: 219361 Number of extensions: 1394519 Number of successful extensions: 3952 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3861 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3951 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)