| Clone Name | rbags7b18 |
|---|---|
| Clone Library Name | barley_pub |
>ERG1_PANGI (O48651) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 539 Score = 219 bits (559), Expect = 5e-57 Identities = 105/123 (85%), Positives = 112/123 (91%) Frame = -1 Query: 673 ASTINTLAGALYKVFSASPDKARDEMRQACFDYLSLGGVCSNGPIALLSGLNPRPLSLVA 494 ASTINTLAGALYKVF ASPDKAR EMR ACFDYLSLGG+CS GPIALLSGLNPRP+SL Sbjct: 415 ASTINTLAGALYKVFCASPDKARQEMRNACFDYLSLGGICSQGPIALLSGLNPRPISLFL 474 Query: 493 HFFAVAIFGVGRLMLPLPSPKRMWTGARLISGACGIIFPIIKAEGVRQMFFPATVPAYYR 314 HFFAVAI+GVGRL++P PSPKRMW GARLI GA GIIFPIIK+EG+RQMFFPA VPAYYR Sbjct: 475 HFFAVAIYGVGRLLIPFPSPKRMWLGARLILGASGIIFPIIKSEGLRQMFFPAIVPAYYR 534 Query: 313 APP 305 APP Sbjct: 535 APP 537
>ERG11_ARATH (O65404) Squalene monooxygenase 1,1 (EC 1.14.99.7) (Squalene| epoxidase 1,1) (SE 1,1) Length = 516 Score = 120 bits (302), Expect = 3e-27 Identities = 56/121 (46%), Positives = 80/121 (66%) Frame = -1 Query: 673 ASTINTLAGALYKVFSASPDKARDEMRQACFDYLSLGGVCSNGPIALLSGLNPRPLSLVA 494 ++T+NTL A +V AS D+A++ MRQ C+DYLS GG ++G +ALL G+NPRP+SL+ Sbjct: 389 SATVNTLGNAFSQVLVASTDEAKEAMRQGCYDYLSSGGFRTSGMMALLGGMNPRPISLIY 448 Query: 493 HFFAVAIFGVGRLMLPLPSPKRMWTGARLISGACGIIFPIIKAEGVRQMFFPATVPAYYR 314 H A+ + +G L+ P PSP R+W RL A ++ P +KAEGV QM FP AY + Sbjct: 449 HLCAITLSSIGHLLSPFPSPLRIWHSLRLFGLAMKMLVPHLKAEGVSQMLFPVNAAAYSK 508 Query: 313 A 311 + Sbjct: 509 S 509
>ERG12_BRANA (O65726) Squalene monooxygenase 1,2 (EC 1.14.99.7) (Squalene| epoxidase 1,2) (SE 1,2) Length = 518 Score = 117 bits (293), Expect = 3e-26 Identities = 52/121 (42%), Positives = 82/121 (67%) Frame = -1 Query: 673 ASTINTLAGALYKVFSASPDKARDEMRQACFDYLSLGGVCSNGPIALLSGLNPRPLSLVA 494 ++T+NTL + ++V AS D+A++ MRQ CFDYLS GG ++G +AL+ G+NPRPLSL Sbjct: 391 SATVNTLGNSFWQVLIASTDEAKEAMRQGCFDYLSSGGFRTSGLMALIGGMNPRPLSLFY 450 Query: 493 HFFAVAIFGVGRLMLPLPSPKRMWTGARLISGACGIIFPIIKAEGVRQMFFPATVPAYYR 314 H F +++ +G+L+ P P+P R+W RL+ + ++ P +KAEG+ QM P AY + Sbjct: 451 HLFVISLSSIGQLLSPFPTPLRVWHSLRLLDLSLKMLVPHLKAEGIGQMLSPTNAAAYRK 510 Query: 313 A 311 + Sbjct: 511 S 511
>ERG12_ARATH (O65402) Squalene monooxygenase 1,2 (EC 1.14.99.7) (Squalene| epoxidase 1,2) (SE 1,2) Length = 517 Score = 117 bits (292), Expect = 4e-26 Identities = 55/121 (45%), Positives = 80/121 (66%) Frame = -1 Query: 673 ASTINTLAGALYKVFSASPDKARDEMRQACFDYLSLGGVCSNGPIALLSGLNPRPLSLVA 494 ++T+NTL A +V S D+A++ MRQ +DYL GG ++G +ALL G+NPRPLSLV Sbjct: 390 SATVNTLGNAFSQVLIGSTDEAKEAMRQGVYDYLCSGGFRTSGMMALLGGMNPRPLSLVY 449 Query: 493 HFFAVAIFGVGRLMLPLPSPKRMWTGARLISGACGIIFPIIKAEGVRQMFFPATVPAYYR 314 H A+ + +G+L+ P PSP R+W +L A ++ P +KAEGV QM FPA AY++ Sbjct: 450 HLCAITLSSIGQLLSPFPSPLRIWHSLKLFGLAMKMLVPNLKAEGVSQMLFPANAAAYHK 509 Query: 313 A 311 + Sbjct: 510 S 510
>ERG11_BRANA (O65727) Squalene monooxygenase 1,1 (EC 1.14.99.7) (Squalene| epoxidase 1,1) (SE 1,1) Length = 506 Score = 104 bits (259), Expect = 3e-22 Identities = 53/121 (43%), Positives = 73/121 (60%) Frame = -1 Query: 673 ASTINTLAGALYKVFSASPDKARDEMRQACFDYLSLGGVCSNGPIALLSGLNPRPLSLVA 494 ++T+NTL A +V AS D+A++ MRQ CFDYLS GG ++G +ALL G+NPRPLSL+ Sbjct: 390 SATVNTLGNAFSQVLIASTDEAKEAMRQGCFDYLSSGGFRTSGMMALLGGMNPRPLSLIF 449 Query: 493 HFFAVAIFGVGRLMLPLPSPKRMWTGARLISGACGIIFPIIKAEGVRQMFFPATVPAYYR 314 H + + +G+L+ P PSP +W RL AEGV QM PA AY + Sbjct: 450 HLCGITLSSIGQLLSPFPSPLGIWHSLRLFG-----------AEGVSQMLSPAYAAAYRK 498 Query: 313 A 311 + Sbjct: 499 S 499
>ERG13_ARATH (O65403) Squalene monooxygenase 2 (EC 1.14.99.7) (Squalene| epoxidase 2) (SE 2) Length = 516 Score = 100 bits (249), Expect = 4e-21 Identities = 46/120 (38%), Positives = 73/120 (60%) Frame = -1 Query: 673 ASTINTLAGALYKVFSASPDKARDEMRQACFDYLSLGGVCSNGPIALLSGLNPRPLSLVA 494 ++T+NTLA +V A+ D+AR+ MRQ CF+YL+ G + G + +L G+NP PL+LV Sbjct: 389 SATVNTLASIFSQVLVATTDEAREGMRQGCFNYLARGDFKTRGLMTILGGMNPHPLTLVL 448 Query: 493 HFFAVAIFGVGRLMLPLPSPKRMWTGARLISGACGIIFPIIKAEGVRQMFFPATVPAYYR 314 H A+ + +G L+ P PSP+R W R+++ A ++ + EG ++M P AY R Sbjct: 449 HLVAITLTSMGHLLSPFPSPRRFWHSLRILAWALQMLGAHLVDEGFKEMLIPTNAAAYRR 508
>ERG1_HUMAN (Q14534) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 574 Score = 89.0 bits (219), Expect = 1e-17 Identities = 46/104 (44%), Positives = 67/104 (64%), Gaps = 3/104 (2%) Frame = -1 Query: 664 INTLAGALYKVFSASPDKARDEMRQACFDYLSLGGVCSNGPIALLSGLNPRPLSLVAHFF 485 +N LA ALY++FSA+ D ++R+ACF Y LGG C GP+ LLS L+P PL+L+ HFF Sbjct: 466 VNILAQALYELFSATDDSLH-QLRKACFLYFKLGGECVAGPVGLLSVLSPNPLALIGHFF 524 Query: 484 AVAIFGVGRLMLPLP---SPKRMWTGARLISGACGIIFPIIKAE 362 AVAI+ V P P+ + + + ++ AC +IFP+I +E Sbjct: 525 AVAIYAVYFCFKSEPWITKPRALLSSSAVLYKACSVIFPLIYSE 568
>ERG1_RAT (P52020) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 573 Score = 87.8 bits (216), Expect = 3e-17 Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 3/104 (2%) Frame = -1 Query: 664 INTLAGALYKVFSASPDKARDEMRQACFDYLSLGGVCSNGPIALLSGLNPRPLSLVAHFF 485 +N LA ALY++FSA+ D R ++R+ACF Y LGG C GP+ LLS L+P PL L+ HFF Sbjct: 465 VNVLAQALYELFSATDDSLR-QLRKACFLYFKLGGECLTGPVGLLSILSPDPLLLIRHFF 523 Query: 484 AVAIFGVGRLMLPLP---SPKRMWTGARLISGACGIIFPIIKAE 362 +VA++ P P+ +++ ++ AC IIFP+I +E Sbjct: 524 SVAVYATYFCFKSEPWATKPRALFSSGAILYKACSIIFPLIYSE 567
>ERG1_MOUSE (P52019) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 572 Score = 85.9 bits (211), Expect = 1e-16 Identities = 44/104 (42%), Positives = 65/104 (62%), Gaps = 3/104 (2%) Frame = -1 Query: 664 INTLAGALYKVFSASPDKARDEMRQACFDYLSLGGVCSNGPIALLSGLNPRPLSLVAHFF 485 +N LA ALY++FSA+ D ++R+ACF Y LGG C GP+ LLS L+P PL L+ HFF Sbjct: 464 VNVLAQALYELFSATDDSLH-QLRKACFLYFKLGGECVTGPVGLLSILSPHPLVLIRHFF 522 Query: 484 AVAIFGVGRLMLPLP---SPKRMWTGARLISGACGIIFPIIKAE 362 +VAI+ P P+ +++ ++ AC I+FP+I +E Sbjct: 523 SVAIYATYFCFKSEPWATKPRALFSSGAVLYKACSILFPLIYSE 566
>ERG1_CANAL (Q92206) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 496 Score = 65.5 bits (158), Expect = 1e-10 Identities = 33/69 (47%), Positives = 43/69 (62%) Frame = -1 Query: 670 STINTLAGALYKVFSASPDKARDEMRQACFDYLSLGGVCSNGPIALLSGLNPRPLSLVAH 491 + INTL+ +LY +F+A R +R CF Y GG C NGPI LLSG+ P P+ L H Sbjct: 389 AVINTLSISLYSLFAADKKPLRI-LRNGCFKYFQRGGECVNGPIGLLSGMLPFPMLLFNH 447 Query: 490 FFAVAIFGV 464 FF+VA + V Sbjct: 448 FFSVAFYSV 456
>ERG1_SCHPO (Q9C1W3) Probable squalene monooxygenase (EC 1.14.99.7) (Squalene| epoxidase) (SE) Length = 457 Score = 65.1 bits (157), Expect = 2e-10 Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 3/104 (2%) Frame = -1 Query: 664 INTLAGALYKVFSASPDKARDEMRQACFDYLSLGGVCSNGPIALLSGLNPRPLSLVAHFF 485 IN L+ ALYK+F+ ++ + C DY GG C GPI LL GL+ P L+ HF+ Sbjct: 352 INVLSIALYKLFTPK-NRYMKALESGCIDYFKRGGNCVEGPIRLLGGLDHSPSHLIGHFY 410 Query: 484 AVAIFGVGRLMLPLPS---PKRMWTGARLISGACGIIFPIIKAE 362 AV ++G+ + +L P+ P R+ + A +I P I +E Sbjct: 411 AVCLYGIYQYVLSGPALLMPVRIIESLLIFLQASLVIIPYILSE 454
>ERG1_YEAST (P32476) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 496 Score = 61.6 bits (148), Expect = 2e-09 Identities = 30/69 (43%), Positives = 42/69 (60%) Frame = -1 Query: 670 STINTLAGALYKVFSASPDKARDEMRQACFDYLSLGGVCSNGPIALLSGLNPRPLSLVAH 491 S IN L+ ALY +F+A D + +++ CF Y GG C N P+ LSG+ P+PL L Sbjct: 389 SVINVLSVALYSLFAADSDNLK-ALQKGCFKYFQRGGDCVNKPVEFLSGVLPKPLQLTRV 447 Query: 490 FFAVAIFGV 464 FFAVA + + Sbjct: 448 FFAVAFYTI 456
>ERG1_CANGA (O13306) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 489 Score = 55.5 bits (132), Expect = 1e-07 Identities = 27/69 (39%), Positives = 42/69 (60%) Frame = -1 Query: 670 STINTLAGALYKVFSASPDKARDEMRQACFDYLSLGGVCSNGPIALLSGLNPRPLSLVAH 491 + +N L+ +LY +F+A K +++ CF Y GG C N P+A L+G+ P+PL L Sbjct: 382 AVVNVLSISLYSLFAAD-SKNLKALQKGCFKYFQRGGDCVNLPVAFLAGVLPKPLLLTRV 440 Query: 490 FFAVAIFGV 464 FFAVA + + Sbjct: 441 FFAVAFYTI 449
>ERG1_ASHGO (Q75F69) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 497 Score = 50.8 bits (120), Expect = 4e-06 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 3/104 (2%) Frame = -1 Query: 673 ASTINTLAGALYKVFSASPDKARDEMRQACFDYLSLGGVCSNGPIALLSGLNPRPLSLVA 494 A INTL+ ALY +F+A + ++++ CF+YL G PI+ LSG+ P P L Sbjct: 389 ACVINTLSIALYSLFAADSYYLK-KLQKGCFEYLGRGEDWVRQPISFLSGVLPSPYLLTK 447 Query: 493 HFFAVAIFGV---GRLMLPLPSPKRMWTGARLISGACGIIFPII 371 FF VA++ V R PL ++ G +I A + P + Sbjct: 448 VFFTVALYSVLINFRGRTPLGFLLAIYEGFAIIFTAAKVFTPFL 491
>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)| Length = 1518 Score = 32.7 bits (73), Expect = 1.0 Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 2/96 (2%) Frame = +3 Query: 288 LQNSASGGAR*YAGTVAGKNICLTPSALIIGKM--IPHAPEINLAPVHIRLGEGRGSISR 461 L SA G A A VA + + +A I G + P NL PV + G G GS+ Sbjct: 626 LMQSAGGAAAAAAAAVAAQRMVCFSNARINGVKPEVIGGPLGNLRPVGVGGGNGSGSVQC 685 Query: 462 PTPKIATAKKCATKLNGRGLRPESRAMGPFEQTPPR 569 P+P +++ + L P++ + QTPPR Sbjct: 686 PSPHPSSSSSSSQ------LSPQTPS-----QTPPR 710
>DSBB_RALSO (Q8XZM2) Disulfide bond formation protein B (Disulfide| oxidoreductase) Length = 159 Score = 30.0 bits (66), Expect = 6.6 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = -1 Query: 532 LSGLNPRPLSLVAHFFAVAIFGVGRLMLPLPSPKRM-WTGARLISGACGI 386 + GL P PL ++ F V I GV L+ L S R+ W G ++SG GI Sbjct: 29 VEGLQPCPLCVLQRFAFVGI-GVFSLLAALSSATRLLWHGLGMLSGLGGI 77
>CB010_HUMAN (Q7Z570) Protein C2orf10| Length = 1209 Score = 30.0 bits (66), Expect = 6.6 Identities = 15/50 (30%), Positives = 23/50 (46%) Frame = +1 Query: 16 RKHSSRAVDKGHHRSSTTKMYNLTRTNQHGHRCSNSEHFNRQDQHPPEIL 165 R ++AV +G++ + QH H S+ E NRQ+ P E L Sbjct: 747 RMSQNQAVKRGYNSVMNESERFYRKRRQHSHSYSSDESLNRQNHLPEEFL 796
>IPPD_MOUSE (Q60829) Dopamine- and cAMP-regulated neuronal phosphoprotein| (DARPP-32) Length = 194 Score = 29.6 bits (65), Expect = 8.7 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +3 Query: 501 KLNGRGLRPESRAMGPFEQTPPRLK*SKHAWRISSLA 611 + +G G P+S+ P TPP LK +H IS+L+ Sbjct: 56 RTSGEGHHPKSKRPNPCAYTPPSLKAVQHLQTISNLS 92 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,520,265 Number of Sequences: 219361 Number of extensions: 2130802 Number of successful extensions: 5379 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 5198 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5368 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)