| Clone Name | rbags7b18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009295.1| Triticum aestivum clone wlm1.pk0005.d6:fis, full insert mRNA sequence Length = 1948 Score = 878 bits (443), Expect = 0.0 Identities = 578/618 (93%), Gaps = 5/618 (0%) Strand = Plus / Minus Query: 59 gtagtacaacaaaaatgtacaatttaactaggaccaatcaacatgggcaccgatgcagca 118 ||||||||||||| ||||||||||| |||||||| |||||||||||||||||| |||||| Sbjct: 1815 gtagtacaacaaagatgtacaatttcactaggacgaatcaacatgggcaccgacgcagca 1756 Query: 119 attcagaacatttcaacagacaggatcagcacccaccggagatactatacacgttcctcg 178 ||||| |||||||||| | |||||||||||||||| |||||||||||||||||||||||| Sbjct: 1755 attcaaaacatttcaaaa-acaggatcagcacccagcggagatactatacacgttcctcg 1697 Query: 179 atccattcggactaccaacacaacacatttcaacgaccggctaacactggcgaacgacta 238 |||||||| ||||||||||||| |||||| || ||||||||||||||| || |||||| Sbjct: 1696 atccattcagactaccaacacagcacattccagtgaccggctaacactgtaga-cgacta 1638 Query: 239 ccaacacagg-aaaaatgccttggtgcaagaga--ttagctgcaccttcgtacttcagaa 295 || ||||||| ||||||| | | |||||||||| |||||||||||||||| ||||||| Sbjct: 1637 ccgacacagggaaaaatgtcatcgtgcaagagagattagctgcaccttcgtcattcagaa 1578 Query: 296 ctccgcttcaggaggagcacggtaatacgcggggacggtagcagggaagaacatttgcct 355 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1577 ctccgcttcgggaggagcccggtaatacgcggggacggtagcagggaagaacatttgcct 1518 Query: 356 cacaccttcagctttgataattgggaagatgataccacatgcgcccgagatcaacctcgc 415 |||||||||||||||||| ||||||||||||||||||||||| || || ||||| ||||| Sbjct: 1517 cacaccttcagctttgatgattgggaagatgataccacatgcacctgaaatcaatctcgc 1458 Query: 416 tccagtccacattcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagat 475 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 1457 tccagtccacattcgtttaggtgaaggaagggggagcatcagtcgtccaacaccaaagat 1398 Query: 476 agcaacagcaaagaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtag 535 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1397 agcaacagcaaagaagtgtgcaaccaaactcaatggccgaggattaagaccggagagtag 1338 Query: 536 agcaatgggcccatttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcg 595 |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 1337 agcaatgggcccatttgaacagacacctccaaggctcaagtaatcaaagcaagcttggcg 1278 Query: 596 catctcgtccctagccttgtcaggcgaggcactgaagactttgtatagagcaccagccaa 655 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1277 catctcatccctagccttgtcaggcgaggaactgaagactttgtatagagcaccagccaa 1218 Query: 656 ggtgtttattgtagaagc 673 ||||||||||||||||| Sbjct: 1217 tgtgtttattgtagaagc 1200
>ref|XM_470613.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1569 Score = 327 bits (165), Expect = 3e-86 Identities = 318/369 (86%) Strand = Plus / Minus Query: 305 aggaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttc 364 |||||| || |||||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 1557 aggaggggcccggtaatatgcagggactgtagcagggaagaacatttgcctcacaccttc 1498 Query: 365 agctttgataattgggaagatgataccacatgcgcccgagatcaacctcgctccagtcca 424 ||||||||| ||||||||||||||||||||||| || || | || ||||| || |||| Sbjct: 1497 agctttgatgattgggaagatgataccacatgcaccggaaaccagtctcgcgccgatcca 1438 Query: 425 cattcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaacagc 484 ||| |||||||||||||| | ||||||||| || |||||||| || ||||||||||||| Sbjct: 1437 catgcgtttaggtgaagggacggggagcattaggcgtccaacgccatagatagcaacagc 1378 Query: 485 aaagaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtagagcaatggg 544 ||||||||| || || ||||||| ||||||||||| || |||||||| |||||||| || Sbjct: 1377 aaagaagtgggctactaaactcagaggccgaggattgaggccagagagaagagcaatagg 1318 Query: 545 cccatttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcgcatctcgtc 604 ||||||||| |||| ||||||||||| |||||||||||||| |||| |||||||| | Sbjct: 1317 cccatttgagaagactcctccaaggctcaagtaatcaaagcaagcttctcgcatctcatt 1258 Query: 605 cctagccttgtcaggcgaggcactgaagactttgtatagagcaccagccaaggtgtttat 664 | |||||| ||||| ||||||| |||||| ||||| ||||||||||||| ||||| || Sbjct: 1257 cttagcctggtcagttgaggcacagaagaccttgtacagagcaccagccagtgtgttgat 1198 Query: 665 tgtagaagc 673 ||||||||| Sbjct: 1197 tgtagaagc 1189
>dbj|AK073426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045D18, full insert sequence Length = 2164 Score = 327 bits (165), Expect = 3e-86 Identities = 318/369 (86%) Strand = Plus / Minus Query: 305 aggaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttc 364 |||||| || |||||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 1633 aggaggggcccggtaatatgcagggactgtagcagggaagaacatttgcctcacaccttc 1574 Query: 365 agctttgataattgggaagatgataccacatgcgcccgagatcaacctcgctccagtcca 424 ||||||||| ||||||||||||||||||||||| || || | || ||||| || |||| Sbjct: 1573 agctttgatgattgggaagatgataccacatgcaccggaaaccagtctcgcgccgatcca 1514 Query: 425 cattcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaacagc 484 ||| |||||||||||||| | ||||||||| || |||||||| || ||||||||||||| Sbjct: 1513 catgcgtttaggtgaagggacggggagcattaggcgtccaacgccatagatagcaacagc 1454 Query: 485 aaagaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtagagcaatggg 544 ||||||||| || || ||||||| ||||||||||| || |||||||| |||||||| || Sbjct: 1453 aaagaagtgggctactaaactcagaggccgaggattgaggccagagagaagagcaatagg 1394 Query: 545 cccatttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcgcatctcgtc 604 ||||||||| |||| ||||||||||| |||||||||||||| |||| |||||||| | Sbjct: 1393 cccatttgagaagactcctccaaggctcaagtaatcaaagcaagcttctcgcatctcatt 1334 Query: 605 cctagccttgtcaggcgaggcactgaagactttgtatagagcaccagccaaggtgtttat 664 | |||||| ||||| ||||||| |||||| ||||| ||||||||||||| ||||| || Sbjct: 1333 cttagcctggtcagttgaggcacagaagaccttgtacagagcaccagccagtgtgttgat 1274 Query: 665 tgtagaagc 673 ||||||||| Sbjct: 1273 tgtagaagc 1265
>dbj|AK068401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149F23, full insert sequence Length = 3149 Score = 311 bits (157), Expect = 2e-81 Identities = 316/369 (85%) Strand = Plus / Minus Query: 305 aggaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttc 364 |||||| || |||||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 2867 aggaggggcccggtaatatgcagggactgtagcagggaagaacatttgcctcacaccttc 2808 Query: 365 agctttgataattgggaagatgataccacatgcgcccgagatcaacctcgctccagtcca 424 |||||| || ||||||||||||||||||||||| || || | || ||||| || |||| Sbjct: 2807 agctttaatgattgggaagatgataccacatgcaccggaaaccagtctcgcgccgatcca 2748 Query: 425 cattcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaacagc 484 ||| |||||||||||||| | ||||||||| || |||||||| || ||||||||||||| Sbjct: 2747 catgcgtttaggtgaagggacggggagcattaggcgtccaacgccatagatagcaacagc 2688 Query: 485 aaagaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtagagcaatggg 544 ||||||||| || || ||||||| ||||||||||| || |||||||| |||||||| || Sbjct: 2687 aaagaagtgggctactaaactcagaggccgaggattgaggccagagagaagagcaatagg 2628 Query: 545 cccatttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcgcatctcgtc 604 ||||||||| |||| ||||||||||| |||||||||||||| |||| |||||||| | Sbjct: 2627 cccatttgagaagactcctccaaggctcaagtaatcaaagcaagcttctcgcatctcatt 2568 Query: 605 cctagccttgtcaggcgaggcactgaagactttgtatagagcaccagccaaggtgtttat 664 | |||||| ||||| ||||||| |||||| ||||| |||||||| |||| ||||| || Sbjct: 2567 cttagcctggtcagttgaggcacagaagaccttgtacagagcaccggccagtgtgttgat 2508 Query: 665 tgtagaagc 673 ||||||||| Sbjct: 2507 tgtagaagc 2499
>ref|XM_470614.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1815 Score = 307 bits (155), Expect = 3e-80 Identities = 314/367 (85%) Strand = Plus / Minus Query: 307 gaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttcag 366 |||||||||| ||||| || ||||| || || ||||||||||| |||||||||||||||| Sbjct: 1579 gaggagcacgataataggcagggacagtggcggggaagaacatatgcctcacaccttcag 1520 Query: 367 ctttgataattgggaagatgataccacatgcgcccgagatcaacctcgctccagtccaca 426 ||||||| || ||||| || ||||||||||| | || |||| || | || |||||| Sbjct: 1519 ctttgatgatggggaaaattataccacatgcactggaaatcagtcttacgccgatccaca 1460 Query: 427 ttcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaacagcaa 486 | |||||||||||||| ||||| ||||| || || || ||||| ||||||| ||||||| Sbjct: 1459 tgcgtttaggtgaagggaggggaagcattaggcgaccgacaccatagatagcgacagcaa 1400 Query: 487 agaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtagagcaatgggcc 546 |||| ||||| || ||||||||||| |||||||| |||||||| || |||||||| |||| Sbjct: 1399 agaaatgtgccactaaactcaatggtcgaggattcagaccagacagaagagcaataggcc 1340 Query: 547 catttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcgcatctcgtccc 606 |||||||| |||||||||||||||| |||||||||||||| |||||||||||||| | || Sbjct: 1339 catttgaaaagacacctccaaggctcaagtaatcaaagcaggcttggcgcatctcattcc 1280 Query: 607 tagccttgtcaggcgaggcactgaagactttgtatagagcaccagccaaggtgtttattg 666 |||||| ||||| ||||||||||| || ||||||||||||||||| || |||||||| | Sbjct: 1279 tagcctgatcaggtgaggcactgaaaaccttgtatagagcaccagctaatgtgtttatgg 1220 Query: 667 tagaagc 673 ||||||| Sbjct: 1219 tagaagc 1213
>dbj|AK061945.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E03, full insert sequence Length = 1273 Score = 307 bits (155), Expect = 3e-80 Identities = 314/367 (85%) Strand = Plus / Minus Query: 307 gaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttcag 366 |||||||||| ||||| || ||||| || || ||||||||||| |||||||||||||||| Sbjct: 989 gaggagcacgataataggcagggacagtggcggggaagaacatatgcctcacaccttcag 930 Query: 367 ctttgataattgggaagatgataccacatgcgcccgagatcaacctcgctccagtccaca 426 ||||||| || ||||| || ||||||||||| | || |||| || | || |||||| Sbjct: 929 ctttgatgatggggaaaattataccacatgcactggaaatcagtcttacgccgatccaca 870 Query: 427 ttcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaacagcaa 486 | |||||||||||||| ||||| ||||| || || || ||||| ||||||| ||||||| Sbjct: 869 tgcgtttaggtgaagggaggggaagcattaggcgaccgacaccatagatagcgacagcaa 810 Query: 487 agaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtagagcaatgggcc 546 |||| ||||| || ||||||||||| |||||||| |||||||| || |||||||| |||| Sbjct: 809 agaaatgtgccactaaactcaatggtcgaggattcagaccagacagaagagcaataggcc 750 Query: 547 catttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcgcatctcgtccc 606 |||||||| |||||||||||||||| |||||||||||||| |||||||||||||| | || Sbjct: 749 catttgaaaagacacctccaaggctcaagtaatcaaagcaggcttggcgcatctcattcc 690 Query: 607 tagccttgtcaggcgaggcactgaagactttgtatagagcaccagccaaggtgtttattg 666 |||||| ||||| ||||||||||| || ||||||||||||||||| || |||||||| | Sbjct: 689 tagcctgatcaggtgaggcactgaaaaccttgtatagagcaccagctaatgtgtttatgg 630 Query: 667 tagaagc 673 ||||||| Sbjct: 629 tagaagc 623
>dbj|AK065032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H02, full insert sequence Length = 2034 Score = 307 bits (155), Expect = 3e-80 Identities = 314/367 (85%) Strand = Plus / Minus Query: 307 gaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttcag 366 |||||||||| ||||| || ||||| || || ||||||||||| |||||||||||||||| Sbjct: 1744 gaggagcacgataataggcagggacagtggcggggaagaacatatgcctcacaccttcag 1685 Query: 367 ctttgataattgggaagatgataccacatgcgcccgagatcaacctcgctccagtccaca 426 ||||||| || ||||| || ||||||||||| | || |||| || | || |||||| Sbjct: 1684 ctttgatgatggggaaaattataccacatgcactggaaatcagtcttacgccgatccaca 1625 Query: 427 ttcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaacagcaa 486 | |||||||||||||| ||||| ||||| || || || ||||| ||||||| ||||||| Sbjct: 1624 tgcgtttaggtgaagggaggggaagcattaggcgaccgacaccatagatagcgacagcaa 1565 Query: 487 agaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtagagcaatgggcc 546 |||| ||||| || ||||||||||| |||||||| |||||||| || |||||||| |||| Sbjct: 1564 agaaatgtgccactaaactcaatggtcgaggattcagaccagacagaagagcaataggcc 1505 Query: 547 catttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcgcatctcgtccc 606 |||||||| |||||||||||||||| |||||||||||||| |||||||||||||| | || Sbjct: 1504 catttgaaaagacacctccaaggctcaagtaatcaaagcaggcttggcgcatctcattcc 1445 Query: 607 tagccttgtcaggcgaggcactgaagactttgtatagagcaccagccaaggtgtttattg 666 |||||| ||||| ||||||||||| || ||||||||||||||||| || |||||||| | Sbjct: 1444 tagcctgatcaggtgaggcactgaaaaccttgtatagagcaccagctaatgtgtttatgg 1385 Query: 667 tagaagc 673 ||||||| Sbjct: 1384 tagaagc 1378
>dbj|AK098895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P20, full insert sequence Length = 2011 Score = 299 bits (151), Expect = 6e-78 Identities = 313/367 (85%) Strand = Plus / Minus Query: 307 gaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttcag 366 |||||||||| ||||| || ||||| || || |||||| |||| |||||||||||||||| Sbjct: 1743 gaggagcacgataataggcagggacagtggcggggaaggacatatgcctcacaccttcag 1684 Query: 367 ctttgataattgggaagatgataccacatgcgcccgagatcaacctcgctccagtccaca 426 ||||||| || ||||| || ||||||||||| | || |||| || | || |||||| Sbjct: 1683 ctttgatgatggggaaaattataccacatgcactggaaatcagtcttacgccgatccaca 1624 Query: 427 ttcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaacagcaa 486 | |||||||||||||| ||||| ||||| || || || ||||| ||||||| ||||||| Sbjct: 1623 tgcgtttaggtgaagggaggggaagcattaggcgaccgacaccatagatagcgacagcaa 1564 Query: 487 agaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtagagcaatgggcc 546 |||| ||||| || ||||||||||| |||||||| |||||||| || |||||||| |||| Sbjct: 1563 agaaatgtgccactaaactcaatggtcgaggattcagaccagacagaagagcaataggcc 1504 Query: 547 catttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcgcatctcgtccc 606 |||||||| |||||||||||||||| |||||||||||||| |||||||||||||| | || Sbjct: 1503 catttgaaaagacacctccaaggctcaagtaatcaaagcaggcttggcgcatctcattcc 1444 Query: 607 tagccttgtcaggcgaggcactgaagactttgtatagagcaccagccaaggtgtttattg 666 |||||| ||||| ||||||||||| || ||||||||||||||||| || |||||||| | Sbjct: 1443 tagcctgatcaggtgaggcactgaaaaccttgtatagagcaccagctaatgtgtttatgg 1384 Query: 667 tagaagc 673 ||||||| Sbjct: 1383 tagaagc 1377
>gb|AY108670.1| Zea mays PCO148652 mRNA sequence Length = 627 Score = 299 bits (151), Expect = 6e-78 Identities = 307/359 (85%) Strand = Plus / Minus Query: 315 cggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttcagctttgata 374 |||||||| ||||| || ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 440 cggtaatatgcgggtactgtagcagggaagaacatctgtctcacgccttcagctttgatg 381 Query: 375 attgggaagatgataccacatgcgcccgagatcaacctcgctccagtccacattcgttta 434 || |||| |||||| || ||||| || || |||| || |||||| |||||||||||||| Sbjct: 380 atagggaggatgatgccgcatgcaccagaaatcagtctagctccaatccacattcgttta 321 Query: 435 ggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaacagcaaagaagtgt 494 ||||||||||| |||||||||| || || |||||| |||||||||||||||||||||| Sbjct: 320 ggtgaaggaagagggagcatcaagcggccgacaccgtagatagcaacagcaaagaagtgc 261 Query: 495 gcaaccaaactcaatggccgaggattaagaccagagagtagagcaatgggcccatttgaa 554 ||||| ||||||| ||||||||| ||||| |||||||||| ||| || ||||| || || Sbjct: 260 gcaactaaactcagtggccgagggttaaggccagagagtaaagcgataggcccgttcgag 201 Query: 555 cagacacctccaaggcttaagtaatcaaagcatgcttggcgcatctcgtccctagccttg 614 |||| ||||| ||||| ||||||||||| || || ||||||||||| | |||||| | Sbjct: 200 aagacgcctccgaggctcaagtaatcaaaacaagcctggcgcatctcattcctagcttga 141 Query: 615 tcaggcgaggcactgaagactttgtatagagcaccagccaaggtgtttattgtagaagc 673 |||||||||||||||||||| ||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 140 tcaggcgaggcactgaagaccttgtacagagcaccggccaatgtgtttattgtggaagc 82
>gb|AY104774.1| Zea mays PCO148653 mRNA sequence Length = 1228 Score = 289 bits (146), Expect = 6e-75 Identities = 299/350 (85%) Strand = Plus / Minus Query: 315 cggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttcagctttgata 374 |||||||| ||||| || || |||||||||||||| || ||||| |||||||||||||| Sbjct: 908 cggtaatatgcgggcacagtggcagggaagaacatctgtctcacgccttcagctttgatg 849 Query: 375 attgggaagatgataccacatgcgcccgagatcaacctcgctccagtccacattcgttta 434 || |||| |||||| || ||||| || || |||| ||| |||||| ||||||| |||||| Sbjct: 848 atcgggaggatgatgccgcatgcaccagaaatcagcctggctccaatccacatccgttta 789 Query: 435 ggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaacagcaaagaagtgt 494 || |||||||| |||||||||| || ||||||||| ||||||| ||||| ||||||||| Sbjct: 788 ggcgaaggaagagggagcatcaagcgaccaacaccgtagatagcgacagcgaagaagtgt 729 Query: 495 gcaaccaaactcaatggccgaggattaagaccagagagtagagcaatgggcccatttgaa 554 ||||| ||||||| |||||||||||||||||| ||||||| ||||| |||||||| || Sbjct: 728 gcaactaaactcagtggccgaggattaagacccgagagtaaggcaataggcccattcgag 669 Query: 555 cagacacctccaaggcttaagtaatcaaagcatgcttggcgcatctcgtccctagccttg 614 |||| ||||| ||||| ||||||||||| || || ||||||||||||| |||||| | Sbjct: 668 aagacgcctccgaggctcaagtaatcaaaacaggcctggcgcatctcgttcctagcttga 609 Query: 615 tcaggcgaggcactgaagactttgtatagagcaccagccaaggtgtttat 664 ||||||||||| |||||||| ||||| |||||||| ||||| |||||||| Sbjct: 608 tcaggcgaggcgctgaagaccttgtacagagcaccggccaacgtgtttat 559
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 256 bits (129), Expect = 8e-65 Identities = 222/253 (87%) Strand = Plus / Plus Query: 421 tccacattcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaa 480 ||||||| |||||||||||||| ||||| ||||| || || || ||||| ||||||| | Sbjct: 6927854 tccacatgcgtttaggtgaagggaggggaagcattaggcgaccgacaccatagatagcga 6927913 Query: 481 cagcaaagaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtagagcaa 540 |||||||||| ||||| || ||||||||||| |||||||| |||||||| || ||||||| Sbjct: 6927914 cagcaaagaaatgtgccactaaactcaatggtcgaggattcagaccagacagaagagcaa 6927973 Query: 541 tgggcccatttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcgcatct 600 | |||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 6927974 taggcccatttgaaaagacacctccaaggctcaagtaatcaaagcaggcttggcgcatct 6928033 Query: 601 cgtccctagccttgtcaggcgaggcactgaagactttgtatagagcaccagccaaggtgt 660 | | |||||||| ||||| ||||||||||| || ||||||||||||||||| || |||| Sbjct: 6928034 cattcctagcctgatcaggtgaggcactgaaaaccttgtatagagcaccagctaatgtgt 6928093 Query: 661 ttattgtagaagc 673 |||| |||||||| Sbjct: 6928094 ttatggtagaagc 6928106 Score = 216 bits (109), Expect = 7e-53 Identities = 217/253 (85%) Strand = Plus / Plus Query: 421 tccacattcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaa 480 ||||||| |||||||||||||| | ||||||||| || |||||||| || ||||||||| Sbjct: 6922869 tccacatgcgtttaggtgaagggacggggagcattaggcgtccaacgccatagatagcaa 6922928 Query: 481 cagcaaagaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtagagcaa 540 ||||||||||||| || || ||||||| ||||||||||| || |||||||| ||||||| Sbjct: 6922929 cagcaaagaagtgggctactaaactcagaggccgaggattgaggccagagagaagagcaa 6922988 Query: 541 tgggcccatttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcgcatct 600 | ||||||||||| |||| ||||||||||| |||||||||||||| |||| ||||||| Sbjct: 6922989 taggcccatttgagaagactcctccaaggctcaagtaatcaaagcaagcttctcgcatct 6923048 Query: 601 cgtccctagccttgtcaggcgaggcactgaagactttgtatagagcaccagccaaggtgt 660 | | | |||||| ||||| ||||||| |||||| ||||| ||||||||||||| |||| Sbjct: 6923049 cattcttagcctggtcagttgaggcacagaagaccttgtacagagcaccagccagtgtgt 6923108 Query: 661 ttattgtagaagc 673 | ||||||||||| Sbjct: 6923109 tgattgtagaagc 6923121 Score = 137 bits (69), Expect = 5e-29 Identities = 87/93 (93%) Strand = Plus / Plus Query: 305 aggaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttc 364 |||||| || |||||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 6922589 aggaggggcccggtaatatgcagggactgtagcagggaagaacatttgcctcacaccttc 6922648 Query: 365 agctttgataattgggaagatgataccacatgc 397 ||||||||| ||||||||||||||||||||||| Sbjct: 6922649 agctttgatgattgggaagatgataccacatgc 6922681 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 307 gaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttcag 366 |||||||||| ||||| || ||||| || || ||||||||||| |||||||||||||||| Sbjct: 6927558 gaggagcacgataataggcagggacagtggcggggaagaacatatgcctcacaccttcag 6927617 Query: 367 ctttgataattgggaagatgataccacatgc 397 ||||||| || ||||| || ||||||||||| Sbjct: 6927618 ctttgatgatggggaaaattataccacatgc 6927648
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 256 bits (129), Expect = 8e-65 Identities = 222/253 (87%) Strand = Plus / Plus Query: 421 tccacattcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaa 480 ||||||| |||||||||||||| ||||| ||||| || || || ||||| ||||||| | Sbjct: 6925749 tccacatgcgtttaggtgaagggaggggaagcattaggcgaccgacaccatagatagcga 6925808 Query: 481 cagcaaagaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtagagcaa 540 |||||||||| ||||| || ||||||||||| |||||||| |||||||| || ||||||| Sbjct: 6925809 cagcaaagaaatgtgccactaaactcaatggtcgaggattcagaccagacagaagagcaa 6925868 Query: 541 tgggcccatttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcgcatct 600 | |||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 6925869 taggcccatttgaaaagacacctccaaggctcaagtaatcaaagcaggcttggcgcatct 6925928 Query: 601 cgtccctagccttgtcaggcgaggcactgaagactttgtatagagcaccagccaaggtgt 660 | | |||||||| ||||| ||||||||||| || ||||||||||||||||| || |||| Sbjct: 6925929 cattcctagcctgatcaggtgaggcactgaaaaccttgtatagagcaccagctaatgtgt 6925988 Query: 661 ttattgtagaagc 673 |||| |||||||| Sbjct: 6925989 ttatggtagaagc 6926001 Score = 216 bits (109), Expect = 7e-53 Identities = 217/253 (85%) Strand = Plus / Plus Query: 421 tccacattcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaa 480 ||||||| |||||||||||||| | ||||||||| || |||||||| || ||||||||| Sbjct: 6920764 tccacatgcgtttaggtgaagggacggggagcattaggcgtccaacgccatagatagcaa 6920823 Query: 481 cagcaaagaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtagagcaa 540 ||||||||||||| || || ||||||| ||||||||||| || |||||||| ||||||| Sbjct: 6920824 cagcaaagaagtgggctactaaactcagaggccgaggattgaggccagagagaagagcaa 6920883 Query: 541 tgggcccatttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcgcatct 600 | ||||||||||| |||| ||||||||||| |||||||||||||| |||| ||||||| Sbjct: 6920884 taggcccatttgagaagactcctccaaggctcaagtaatcaaagcaagcttctcgcatct 6920943 Query: 601 cgtccctagccttgtcaggcgaggcactgaagactttgtatagagcaccagccaaggtgt 660 | | | |||||| ||||| ||||||| |||||| ||||| ||||||||||||| |||| Sbjct: 6920944 cattcttagcctggtcagttgaggcacagaagaccttgtacagagcaccagccagtgtgt 6921003 Query: 661 ttattgtagaagc 673 | ||||||||||| Sbjct: 6921004 tgattgtagaagc 6921016 Score = 137 bits (69), Expect = 5e-29 Identities = 87/93 (93%) Strand = Plus / Plus Query: 305 aggaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttc 364 |||||| || |||||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 6920484 aggaggggcccggtaatatgcagggactgtagcagggaagaacatttgcctcacaccttc 6920543 Query: 365 agctttgataattgggaagatgataccacatgc 397 ||||||||| ||||||||||||||||||||||| Sbjct: 6920544 agctttgatgattgggaagatgataccacatgc 6920576 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 307 gaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttcag 366 |||||||||| ||||| || ||||| || || ||||||||||| |||||||||||||||| Sbjct: 6925453 gaggagcacgataataggcagggacagtggcggggaagaacatatgcctcacaccttcag 6925512 Query: 367 ctttgataattgggaagatgataccacatgc 397 ||||||| || ||||| || ||||||||||| Sbjct: 6925513 ctttgatgatggggaaaattataccacatgc 6925543
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11, complete sequence Length = 166072 Score = 256 bits (129), Expect = 8e-65 Identities = 222/253 (87%) Strand = Plus / Plus Query: 421 tccacattcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaa 480 ||||||| |||||||||||||| ||||| ||||| || || || ||||| ||||||| | Sbjct: 94451 tccacatgcgtttaggtgaagggaggggaagcattaggcgaccgacaccatagatagcga 94510 Query: 481 cagcaaagaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtagagcaa 540 |||||||||| ||||| || ||||||||||| |||||||| |||||||| || ||||||| Sbjct: 94511 cagcaaagaaatgtgccactaaactcaatggtcgaggattcagaccagacagaagagcaa 94570 Query: 541 tgggcccatttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcgcatct 600 | |||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 94571 taggcccatttgaaaagacacctccaaggctcaagtaatcaaagcaggcttggcgcatct 94630 Query: 601 cgtccctagccttgtcaggcgaggcactgaagactttgtatagagcaccagccaaggtgt 660 | | |||||||| ||||| ||||||||||| || ||||||||||||||||| || |||| Sbjct: 94631 cattcctagcctgatcaggtgaggcactgaaaaccttgtatagagcaccagctaatgtgt 94690 Query: 661 ttattgtagaagc 673 |||| |||||||| Sbjct: 94691 ttatggtagaagc 94703 Score = 216 bits (109), Expect = 7e-53 Identities = 217/253 (85%) Strand = Plus / Plus Query: 421 tccacattcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaa 480 ||||||| |||||||||||||| | ||||||||| || |||||||| || ||||||||| Sbjct: 89466 tccacatgcgtttaggtgaagggacggggagcattaggcgtccaacgccatagatagcaa 89525 Query: 481 cagcaaagaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtagagcaa 540 ||||||||||||| || || ||||||| ||||||||||| || |||||||| ||||||| Sbjct: 89526 cagcaaagaagtgggctactaaactcagaggccgaggattgaggccagagagaagagcaa 89585 Query: 541 tgggcccatttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcgcatct 600 | ||||||||||| |||| ||||||||||| |||||||||||||| |||| ||||||| Sbjct: 89586 taggcccatttgagaagactcctccaaggctcaagtaatcaaagcaagcttctcgcatct 89645 Query: 601 cgtccctagccttgtcaggcgaggcactgaagactttgtatagagcaccagccaaggtgt 660 | | | |||||| ||||| ||||||| |||||| ||||| ||||||||||||| |||| Sbjct: 89646 cattcttagcctggtcagttgaggcacagaagaccttgtacagagcaccagccagtgtgt 89705 Query: 661 ttattgtagaagc 673 | ||||||||||| Sbjct: 89706 tgattgtagaagc 89718 Score = 137 bits (69), Expect = 5e-29 Identities = 87/93 (93%) Strand = Plus / Plus Query: 305 aggaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttc 364 |||||| || |||||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 89186 aggaggggcccggtaatatgcagggactgtagcagggaagaacatttgcctcacaccttc 89245 Query: 365 agctttgataattgggaagatgataccacatgc 397 ||||||||| ||||||||||||||||||||||| Sbjct: 89246 agctttgatgattgggaagatgataccacatgc 89278 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 307 gaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttcag 366 |||||||||| ||||| || ||||| || || ||||||||||| |||||||||||||||| Sbjct: 94155 gaggagcacgataataggcagggacagtggcggggaagaacatatgcctcacaccttcag 94214 Query: 367 ctttgataattgggaagatgataccacatgc 397 ||||||| || ||||| || ||||||||||| Sbjct: 94215 ctttgatgatggggaaaattataccacatgc 94245
>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12, complete sequence Length = 120392 Score = 216 bits (109), Expect = 7e-53 Identities = 217/253 (85%) Strand = Plus / Plus Query: 421 tccacattcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaa 480 ||||||| |||||||||||||| | ||||||||| || |||||||| || ||||||||| Sbjct: 118802 tccacatgcgtttaggtgaagggacggggagcattaggcgtccaacgccatagatagcaa 118861 Query: 481 cagcaaagaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtagagcaa 540 ||||||||||||| || || ||||||| ||||||||||| || |||||||| ||||||| Sbjct: 118862 cagcaaagaagtgggctactaaactcagaggccgaggattgaggccagagagaagagcaa 118921 Query: 541 tgggcccatttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcgcatct 600 | ||||||||||| |||| ||||||||||| |||||||||||||| |||| ||||||| Sbjct: 118922 taggcccatttgagaagactcctccaaggctcaagtaatcaaagcaagcttctcgcatct 118981 Query: 601 cgtccctagccttgtcaggcgaggcactgaagactttgtatagagcaccagccaaggtgt 660 | | | |||||| ||||| ||||||| |||||| ||||| ||||||||||||| |||| Sbjct: 118982 cattcttagcctggtcagttgaggcacagaagaccttgtacagagcaccagccagtgtgt 119041 Query: 661 ttattgtagaagc 673 | ||||||||||| Sbjct: 119042 tgattgtagaagc 119054 Score = 137 bits (69), Expect = 5e-29 Identities = 87/93 (93%) Strand = Plus / Plus Query: 305 aggaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacaccttc 364 |||||| || |||||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 118522 aggaggggcccggtaatatgcagggactgtagcagggaagaacatttgcctcacaccttc 118581 Query: 365 agctttgataattgggaagatgataccacatgc 397 ||||||||| ||||||||||||||||||||||| Sbjct: 118582 agctttgatgattgggaagatgataccacatgc 118614
>gb|AC124214.8| Medicago truncatula clone mth2-36a23, complete sequence Length = 118803 Score = 91.7 bits (46), Expect = 3e-15 Identities = 145/178 (81%) Strand = Plus / Minus Query: 421 tccacattcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaa 480 ||||||||||||| || ||||||| || | || || || ||||||||||| | ||| | Sbjct: 95947 tccacattcgttttggagaaggaaatggtatcaagaggcggccaacaccgaatacagcca 95888 Query: 481 cagcaaagaagtgtgcaaccaaactcaatggccgaggattaagaccagagagtagagcaa 540 | || ||||| ||| |||||| |||||||| || ||||| ||||| ||||||||||| | Sbjct: 95887 ccgcgaagaaatgtagaaccaagctcaatggacgcggattcagaccggagagtagagcta 95828 Query: 541 tgggcccatttgaacagacacctccaaggcttaagtaatcaaagcatgcttggcgcat 598 | ||||||| ||| || |||||||| ||||| || |||||||| |||||| ||||||| Sbjct: 95827 ttggcccatctgagcaaacacctccgaggctcaaataatcaaaacatgctcggcgcat 95770
>gb|AF316320.1|AF316320 Nicotiana tabacum JD1 (JD1) mRNA, complete cds Length = 1961 Score = 89.7 bits (45), Expect = 1e-14 Identities = 156/193 (80%) Strand = Plus / Plus Query: 301 cttcaggaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacac 360 |||||||||||| | |||||| || || || ||||| ||||||||||| |||||||| | Sbjct: 185 cttcaggaggagacctgtaatatgcaggaacagtagcggggaagaacatctgcctcactc 244 Query: 361 cttcagctttgataattgggaagatgataccacatgcgcccgagatcaacctcgctccag 420 |||| || ||||| || ||||| || || ||| |||| |||||||||| || |||||| Sbjct: 245 cttctgccttgatgatagggaaaataattccagatgcacccgagatcagccgggctccaa 304 Query: 421 tccacattcgtttaggtgaaggaagggggagcatcagccgtccaacaccgaagatagcaa 480 ||||||| ||||| ||||| || | || |||| || || |||||||| ||||||| | Sbjct: 305 tccacatacgtttgggtgatgggaaaggcagcagcaagcggccaacaccatagatagcca 364 Query: 481 cagcaaagaagtg 493 ||||||||||||| Sbjct: 365 cagcaaagaagtg 377
>ref|NM_119938.3| Arabidopsis thaliana oxidoreductase AT4G37760 mRNA, complete cds Length = 2028 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 338 agggaagaacatttgcctcacaccttcagctttgataattgggaagatgat 388 ||||||||||||||||||||||||||| ||||| || ||||| || ||||| Sbjct: 1716 agggaagaacatttgcctcacaccttctgcttttattattggaaatatgat 1666
>gb|BT001057.1| Arabidopsis thaliana At4g37760/T28I19_40 mRNA, complete cds Length = 1578 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 338 agggaagaacatttgcctcacaccttcagctttgataattgggaagatgat 388 ||||||||||||||||||||||||||| ||||| || ||||| || ||||| Sbjct: 1518 agggaagaacatttgcctcacaccttctgcttttattattggaaatatgat 1468
>emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 88 Length = 198493 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 338 agggaagaacatttgcctcacaccttcagctttgataattgggaagatgat 388 ||||||||||||||||||||||||||| ||||| || ||||| || ||||| Sbjct: 48799 agggaagaacatttgcctcacaccttctgcttttattattggaaatatgat 48749
>emb|AL035709.1|ATT28I19 Arabidopsis thaliana DNA chromosome 4, BAC clone T28I19 (ESSA project) Length = 110766 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 338 agggaagaacatttgcctcacaccttcagctttgataattgggaagatgat 388 ||||||||||||||||||||||||||| ||||| || ||||| || ||||| Sbjct: 45096 agggaagaacatttgcctcacaccttctgcttttattattggaaatatgat 45046
>gb|AY072019.1| Arabidopsis thaliana AT4g37760/T28I19_40 mRNA, complete cds Length = 1837 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 338 agggaagaacatttgcctcacaccttcagctttgataattgggaagatgat 388 ||||||||||||||||||||||||||| ||||| || ||||| || ||||| Sbjct: 1606 agggaagaacatttgcctcacaccttctgcttttattattggaaatatgat 1556
>emb|BX827194.1|CNS0A48X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2018 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 338 agggaagaacatttgcctcacaccttcagctttgataattgggaagatgat 388 ||||||||||||||||||||||||||| ||||| || ||||| || ||||| Sbjct: 1716 agggaagaacatttgcctcacaccttctgcttttattattggaaatatgat 1666
>gb|AY084818.1| Arabidopsis thaliana clone 118648 mRNA, complete sequence Length = 1836 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 338 agggaagaacatttgcctcacaccttcagctttgataattgggaagatgat 388 ||||||||||||||||||||||||||| ||||| || ||||| || ||||| Sbjct: 1598 agggaagaacatttgcctcacaccttctgcttttattattggaaatatgat 1548
>gb|AY995182.1| Datura innoxia squalene monooxygenase mRNA, complete cds Length = 1990 Score = 56.0 bits (28), Expect = 2e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 301 cttcaggaggagcacggtaatacgcggggacggtagcagggaagaacatttgcctcacac 360 ||||||||||||| | ||||| ||||| | |||||| ||||||||||| ||||| || | Sbjct: 1650 cttcaggaggagccctataatatgcgggaatggtagctgggaagaacatctgcctaaccc 1591 Query: 361 cttcagctttgataattgggaagatgat 388 |||| || ||||| || ||||| ||||| Sbjct: 1590 cttctgccttgatgatagggaaaatgat 1563
>gb|BT013842.1| Lycopersicon esculentum clone 132799F, mRNA sequence Length = 1978 Score = 52.0 bits (26), Expect = 0.002 Identities = 137/174 (78%) Strand = Plus / Minus Query: 317 gtaatacgcggggacggtagcagggaagaacatttgcctcacaccttcagctttgataat 376 |||||| ||||| || ||||||||||||||||| || || || ||||| || ||||| || Sbjct: 1750 gtaatatgcgggaacagtagcagggaagaacatctgtctgaccccttctgccttgatgat 1691 Query: 377 tgggaagatgataccacatgcgcccgagatcaacctcgctccagtccacattcgtttagg 436 ||||| ||||| || |||| | ||| || | || |||||| |||| || ||||| || Sbjct: 1690 agggaaaatgattgcagatgcactcgatattagccgggctccaatccatatacgtttcgg 1631 Query: 437 tgaaggaagggggagcatcagccgtccaacaccgaagatagcaacagcaaagaa 490 ||| || | || |||| || || |||||||| |||||||| ||||||||||| Sbjct: 1630 tgatgggaaaggaagcagcaagcggccaacaccaaagatagccacagcaaagaa 1577 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 567 aggcttaagtaatcaaagcatgcttggcgcatctcgtccctagc 610 ||||| || |||||||||||||||| |||||||| | |||||| Sbjct: 1500 aggctcaaataatcaaagcatgcttcacgcatctccttcctagc 1457
>gb|AC011737.10| Homo sapiens BAC clone RP11-33N4 from 2, complete sequence Length = 176709 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 gcaattcagaacatttcaacag 137 |||||||||||||||||||||| Sbjct: 12843 gcaattcagaacatttcaacag 12864
>emb|AL583743.3|CNS07EFW Human chromosome 14 DNA sequence BAC R-236M11 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 166462 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 gatttatagaatttagaaagca 23 |||||||||||||||||||||| Sbjct: 128853 gatttatagaatttagaaagca 128874
>emb|AL583742.2|CNS07EFV Human chromosome 14 DNA sequence BAC R-318A9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 175584 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2 gatttatagaatttagaaagca 23 |||||||||||||||||||||| Sbjct: 116337 gatttatagaatttagaaagca 116316
>emb|BX539332.13| Zebrafish DNA sequence from clone RP71-23D18 in linkage group 22, complete sequence Length = 176625 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 accaacacaacacatttcaac 212 ||||||||||||||||||||| Sbjct: 26866 accaacacaacacatttcaac 26886
>emb|AL021488.1|CEY45F10A Caenorhabditis elegans YAC Y45F10A, complete sequence Length = 26343 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 acaacaaaaatgtacaattta 84 ||||||||||||||||||||| Sbjct: 12755 acaacaaaaatgtacaattta 12775 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 caacaaaaatgtacaattta 84 |||||||||||||||||||| Sbjct: 9836 caacaaaaatgtacaattta 9817
>gb|AC123060.4| Mus musculus chromosome 6 clone RP23-214M22, complete sequence Length = 210248 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 catttgaacagacacctcca 566 |||||||||||||||||||| Sbjct: 193711 catttgaacagacacctcca 193730
>gb|AC150430.3| Branchiostoma floridae clone CH302-99K22, complete sequence Length = 131908 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 tagtagtacaacaaaaatgt 76 |||||||||||||||||||| Sbjct: 95196 tagtagtacaacaaaaatgt 95177
>gb|AC132352.3| Mus musculus BAC clone RP24-97D9 from chromosome 6, complete sequence Length = 168117 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 catttgaacagacacctcca 566 |||||||||||||||||||| Sbjct: 159108 catttgaacagacacctcca 159089
>gb|BT013525.1| Lycopersicon esculentum clone 132243F, mRNA sequence Length = 1986 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 515 aggattaagaccagagagtagagc 538 ||||| |||||||||||||||||| Sbjct: 1414 aggatcaagaccagagagtagagc 1391
>gb|AC124662.10| Mus musculus chromosome 9, clone RP24-409K22, complete sequence Length = 235471 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 gaacagacacctccaaggct 571 |||||||||||||||||||| Sbjct: 221576 gaacagacacctccaaggct 221557
>gb|AC102637.7| Mus musculus chromosome 6, clone RP23-216B9, complete sequence Length = 196356 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 catttgaacagacacctcca 566 |||||||||||||||||||| Sbjct: 122274 catttgaacagacacctcca 122293
>gb|AF167426.1| Lycopersicon esculentum 1-aminocyclopropane-1-carboxylate synthase (ACS7B) and putative squalene epoxidase (ERG) genes, complete cds Length = 13830 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 515 aggattaagaccagagagtagagc 538 ||||| |||||||||||||||||| Sbjct: 9876 aggatcaagaccagagagtagagc 9899
>gb|AC158753.8| Mus musculus chromosome 5, clone RP23-301E24, complete sequence Length = 190368 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 gtacaacaaaaatgtacaat 81 |||||||||||||||||||| Sbjct: 145984 gtacaacaaaaatgtacaat 146003
>emb|BX470178.13| Zebrafish DNA sequence from clone CH211-285K18, complete sequence Length = 166954 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 aacaaaaatgtacaatttaa 85 |||||||||||||||||||| Sbjct: 34293 aacaaaaatgtacaatttaa 34312
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 accaacacaggaaaaatgcc 257 |||||||||||||||||||| Sbjct: 32663470 accaacacaggaaaaatgcc 32663451
>gb|AC108846.15| Mus musculus chromosome 9, clone RP23-12I4, complete sequence Length = 212729 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tgcctcacaccttcagcttt 370 |||||||||||||||||||| Sbjct: 114151 tgcctcacaccttcagcttt 114132
>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695H10 Length = 136883 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 accaacacaggaaaaatgcc 257 |||||||||||||||||||| Sbjct: 126265 accaacacaggaaaaatgcc 126246
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 accaacacaggaaaaatgcc 257 |||||||||||||||||||| Sbjct: 26265 accaacacaggaaaaatgcc 26246
>gb|AC162937.6| Mus musculus BAC clone RP23-120I8 from chromosome 9, complete sequence Length = 207210 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 gaacagacacctccaaggct 571 |||||||||||||||||||| Sbjct: 63966 gaacagacacctccaaggct 63947
>gb|AC153498.17| Mus musculus 10 BAC RP23-353P23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192394 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 agaatttagaaagcacagct 28 |||||||||||||||||||| Sbjct: 105397 agaatttagaaagcacagct 105416
>emb|AL512414.2|CNS07EFC Human chromosome 14 DNA sequence BAC R-663F5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 158357 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 accttcagctttgataattg 378 |||||||||||||||||||| Sbjct: 114929 accttcagctttgataattg 114948
>emb|AL355099.5|CNS05TCI Human chromosome 14 DNA sequence BAC R-1A16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 155827 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 accttcagctttgataattg 378 |||||||||||||||||||| Sbjct: 13966 accttcagctttgataattg 13985
>gb|M30316.1|CAVXDHB C.vicina xanthine dehydrogenase (Xdh) gene allele 1, exons 2-4 Length = 8062 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 attcagaacatttcaacagacagg 142 |||||||| ||||||||||||||| Sbjct: 6942 attcagaaaatttcaacagacagg 6919 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,251,759 Number of Sequences: 3902068 Number of extensions: 5251759 Number of successful extensions: 97078 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96895 Number of HSP's gapped (non-prelim): 175 length of query: 673 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 650 effective length of database: 17,143,297,704 effective search space: 11143143507600 effective search space used: 11143143507600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)