| Clone Name | rbags6m17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK064962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A17, full insert sequence Length = 1211 Score = 841 bits (424), Expect = 0.0 Identities = 548/588 (93%), Gaps = 1/588 (0%) Strand = Plus / Minus Query: 161 tctcatcacccttacgagctcaccatgttgaactggaacctagacagctgctgtgggatg 220 |||||||||| | ||||||| |||||||||||||||||||||||||||||||| || ||| Sbjct: 793 tctcatcaccttcacgagctaaccatgttgaactggaacctagacagctgctgcggaatg 734 Query: 221 gtggaaattacaggtccataccgctgaacattgtcatagagttcaaacagtggaacagca 280 |||||||| || || ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 733 gtggaaatgactggcccatatcgctgaacgttgtcatagagttcaaacagtggaacagca 674 Query: 281 agtagcttcaagttccttggaacagcgaaatactctctttcagttagatgaacaatgaaa 340 || ||||||| |||||| |||||||| |||||||||||||||| ||| |||||||||||| Sbjct: 673 agcagcttcaggttcctcggaacagcaaaatactctctttcagataggtgaacaatgaaa 614 Query: 341 agcttcttgcattccttgggcttggttatatgtggagggcaataaggatacatcacggtc 400 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 613 agcttcttgcactccttgggcttggttatatgtggagggcagtaaggatacatcacagtc 554 Query: 401 tcaaagtttggcctccaccaaacagcaacacactcaccaacctgccagttaggtggaaat 460 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 553 tcaaagtttggcctccaccatacagcaacacactctccaacctgccagttaggtggaaag 494 Query: 461 gaaggtgagttcactgcaagtttgctgcacagctttcttttcaggccctcaatttcattt 520 ||||| |||||||||||||| || ||||| | |||||||||||| ||||||||||||||| Sbjct: 493 gaaggcgagttcactgcaagcttactgcataactttcttttcagaccctcaatttcattt 434 Query: 521 tctccaggcttcaaacgtccaccaggaagtttgcaaaatgtgtttccaatttgcaataac 580 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| | | Sbjct: 433 tctccaggcttcaaacgtccaccaggaagcttgcaaaatgtattaccaatttgcaacagc 374 Query: 581 agtatgtgggggtgattgtgctcttgcaccagtaggatagcttcaacacttgtccgcatt 640 ||||||||||| || ||||| |||||||||| |||||| ||||||||||| ||||||||| Sbjct: 373 agtatgtggggatggttgtgttcttgcaccaataggattgcttcaacactggtccgcatt 314 Query: 641 ccttctttcatgtagttgaccttcatgcgggcgaggcggtcggcgacgggaggtgtcctt 700 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 313 ccttctttcatgtagttgaccttcatgcgggcgaggcggtcggcgac-ggaggtgtcctt 255 Query: 701 ctccatcttgggctccttggtgccgaacgtgtagttggcgagcgggta 748 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 ctccatcttgggctccttggtgccgaacgtgtagttggcgagcgggta 207
>dbj|AK104757.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G07, full insert sequence Length = 1014 Score = 825 bits (416), Expect = 0.0 Identities = 540/580 (93%), Gaps = 1/580 (0%) Strand = Plus / Minus Query: 161 tctcatcacccttacgagctcaccatgttgaactggaacctagacagctgctgtgggatg 220 |||||||||| | ||||||| |||||||||||||||||||||||||||||||| || ||| Sbjct: 579 tctcatcaccttcacgagctaaccatgttgaactggaacctagacagctgctgcggaatg 520 Query: 221 gtggaaattacaggtccataccgctgaacattgtcatagagttcaaacagtggaacagca 280 |||||||| || || ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 519 gtggaaatgactggcccatatcgctgaacgttgtcatagagttcaaacagtggaacagca 460 Query: 281 agtagcttcaagttccttggaacagcgaaatactctctttcagttagatgaacaatgaaa 340 || ||||||| |||||| |||||||| |||||||||||||||| ||| |||||||||||| Sbjct: 459 agcagcttcaggttcctcggaacagcaaaatactctctttcagataggtgaacaatgaaa 400 Query: 341 agcttcttgcattccttgggcttggttatatgtggagggcaataaggatacatcacggtc 400 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 399 agcttcttgcactccttgggcttggttatatgtggagggcagtaaggatacatcacagtc 340 Query: 401 tcaaagtttggcctccaccaaacagcaacacactcaccaacctgccagttaggtggaaat 460 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 339 tcaaagtttggcctccaccatacagcaacacactctccaacctgccagttaggtggaaag 280 Query: 461 gaaggtgagttcactgcaagtttgctgcacagctttcttttcaggccctcaatttcattt 520 ||||| |||||||||||||| || ||||| | |||||||||||| ||||||||||||||| Sbjct: 279 gaaggcgagttcactgcaagcttactgcataactttcttttcagaccctcaatttcattt 220 Query: 521 tctccaggcttcaaacgtccaccaggaagtttgcaaaatgtgtttccaatttgcaataac 580 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| | | Sbjct: 219 tctccaggcttcaaacgtccaccaggaagcttgcaaaatgtattaccaatttgcaacagc 160 Query: 581 agtatgtgggggtgattgtgctcttgcaccagtaggatagcttcaacacttgtccgcatt 640 ||||||||||| || ||||| |||||||||| |||||| ||||||||||| ||||||||| Sbjct: 159 agtatgtggggatggttgtgttcttgcaccaataggattgcttcaacactggtccgcatt 100 Query: 641 ccttctttcatgtagttgaccttcatgcgggcgaggcggtcggcgacgggaggtgtcctt 700 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 99 ccttctttcatgtagttgaccttcatgcgggcgaggcggtcggcgac-ggaggtgtcctt 41 Query: 701 ctccatcttgggctccttggtgccgaacgtgtagttggcg 740 |||||||||||||||||||||||||||||||||||||||| Sbjct: 40 ctccatcttgggctccttggtgccgaacgtgtagttggcg 1
>dbj|AK060155.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F03, full insert sequence Length = 1014 Score = 825 bits (416), Expect = 0.0 Identities = 540/580 (93%), Gaps = 1/580 (0%) Strand = Plus / Minus Query: 161 tctcatcacccttacgagctcaccatgttgaactggaacctagacagctgctgtgggatg 220 |||||||||| | ||||||| |||||||||||||||||||||||||||||||| || ||| Sbjct: 579 tctcatcaccttcacgagctaaccatgttgaactggaacctagacagctgctgcggaatg 520 Query: 221 gtggaaattacaggtccataccgctgaacattgtcatagagttcaaacagtggaacagca 280 |||||||| || || ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 519 gtggaaatgactggcccatatcgctgaacgttgtcatagagttcaaacagtggaacagca 460 Query: 281 agtagcttcaagttccttggaacagcgaaatactctctttcagttagatgaacaatgaaa 340 || ||||||| |||||| |||||||| |||||||||||||||| ||| |||||||||||| Sbjct: 459 agcagcttcaggttcctcggaacagcaaaatactctctttcagataggtgaacaatgaaa 400 Query: 341 agcttcttgcattccttgggcttggttatatgtggagggcaataaggatacatcacggtc 400 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 399 agcttcttgcactccttgggcttggttatatgtggagggcagtaaggatacatcacagtc 340 Query: 401 tcaaagtttggcctccaccaaacagcaacacactcaccaacctgccagttaggtggaaat 460 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 339 tcaaagtttggcctccaccatacagcaacacactctccaacctgccagttaggtggaaag 280 Query: 461 gaaggtgagttcactgcaagtttgctgcacagctttcttttcaggccctcaatttcattt 520 ||||| |||||||||||||| || ||||| | |||||||||||| ||||||||||||||| Sbjct: 279 gaaggcgagttcactgcaagcttactgcataactttcttttcagaccctcaatttcattt 220 Query: 521 tctccaggcttcaaacgtccaccaggaagtttgcaaaatgtgtttccaatttgcaataac 580 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| | | Sbjct: 219 tctccaggcttcaaacgtccaccaggaagcttgcaaaatgtattaccaatttgcaacagc 160 Query: 581 agtatgtgggggtgattgtgctcttgcaccagtaggatagcttcaacacttgtccgcatt 640 ||||||||||| || ||||| |||||||||| |||||| ||||||||||| ||||||||| Sbjct: 159 agtatgtggggatggttgtgttcttgcaccaataggattgcttcaacactggtccgcatt 100 Query: 641 ccttctttcatgtagttgaccttcatgcgggcgaggcggtcggcgacgggaggtgtcctt 700 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 99 ccttctttcatgtagttgaccttcatgcgggcgaggcggtcggcgac-ggaggtgtcctt 41 Query: 701 ctccatcttgggctccttggtgccgaacgtgtagttggcg 740 |||||||||||||||||||||||||||||||||||||||| Sbjct: 40 ctccatcttgggctccttggtgccgaacgtgtagttggcg 1
>ref|XM_474401.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 823 bits (415), Expect = 0.0 Identities = 536/575 (93%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 174 acgagctcaccatgttgaactggaacctagacagctgctgtgggatggtggaaattacag 233 ||||||| |||||||||||||||||||||||||||||||| || ||||||||||| || | Sbjct: 607 acgagctaaccatgttgaactggaacctagacagctgctgcggaatggtggaaatgactg 548 Query: 234 gtccataccgctgaacattgtcatagagttcaaacagtggaacagcaagtagcttcaagt 293 | ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 547 gcccatatcgctgaacgttgtcatagagttcaaacagtggaacagcaagcagcttcaggt 488 Query: 294 tccttggaacagcgaaatactctctttcagttagatgaacaatgaaaagcttcttgcatt 353 |||| |||||||| |||||||||||||||| ||| ||||||||||||||||||||||| | Sbjct: 487 tcctcggaacagcaaaatactctctttcagataggtgaacaatgaaaagcttcttgcact 428 Query: 354 ccttgggcttggttatatgtggagggcaataaggatacatcacggtctcaaagtttggcc 413 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 427 ccttgggcttggttatatgtggagggcagtaaggatacatcacagtctcaaagtttggcc 368 Query: 414 tccaccaaacagcaacacactcaccaacctgccagttaggtggaaatgaaggtgagttca 473 ||||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||| Sbjct: 367 tccaccatacagcaacacactctccaacctgccagttaggtggaaaggaaggcgagttca 308 Query: 474 ctgcaagtttgctgcacagctttcttttcaggccctcaatttcattttctccaggcttca 533 ||||||| || ||||| | |||||||||||| |||||||||||||||||||||||||||| Sbjct: 307 ctgcaagcttactgcataactttcttttcagaccctcaatttcattttctccaggcttca 248 Query: 534 aacgtccaccaggaagtttgcaaaatgtgtttccaatttgcaataacagtatgtgggggt 593 |||||||||||||||| ||||||||||| || ||||||||||| | |||||||||||| | Sbjct: 247 aacgtccaccaggaagcttgcaaaatgtattaccaatttgcaacagcagtatgtggggat 188 Query: 594 gattgtgctcttgcaccagtaggatagcttcaacacttgtccgcattccttctttcatgt 653 | ||||| |||||||||| |||||| ||||||||||| |||||||||||||||||||||| Sbjct: 187 ggttgtgttcttgcaccaataggattgcttcaacactggtccgcattccttctttcatgt 128 Query: 654 agttgaccttcatgcgggcgaggcggtcggcgacgggaggtgtccttctccatcttgggc 713 ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 127 agttgaccttcatgcgggcgaagcggtcggcgac-ggaggtgtccttctccatcttgggc 69 Query: 714 tccttggtgccgaacgtgtagttggcgagcgggta 748 ||||||||||||||||||||||||||||||||||| Sbjct: 68 tccttggtgccgaacgtgtagttggcgagcgggta 34
>gb|AY104258.1| Zea mays PCO079129 mRNA sequence Length = 1187 Score = 710 bits (358), Expect = 0.0 Identities = 531/586 (90%), Gaps = 2/586 (0%) Strand = Plus / Minus Query: 163 tcatcacccttacgagctcaccatgttgaactggaacctagacagctgctgtgggatggt 222 |||||||||| | ||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 753 tcatcaccctaa-gagctaaccatgttgaactggaacctagaaagctgctgcgggatggt 695 Query: 223 ggaaattacaggtccataccgctgaacattgtcatagagttcaaacagtggaacagcaag 282 || || ||||| || |||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 694 agagatgacaggcccgtacctctgaacattgtcgtagagttcaaacagtggaacagcaag 635 Query: 283 tagcttcaagttccttggaacagcgaaatactctctttcagttagatgaacaatgaaaag 342 || |||| |||||||||||||| |||||||||||||| | ||| |||||||||||||| Sbjct: 634 cagtttcagattccttggaacagcaaaatactctctttcggataggtgaacaatgaaaag 575 Query: 343 cttcttgcattccttgggcttggttatatgtggagggcaataaggatacatcacggtctc 402 |||||||| ||||||||||| || ||||||||||| || |||||||||||||| ||||| Sbjct: 574 tttcttgcactccttgggcttagtgatatgtggaggacagtaaggatacatcacagtctc 515 Query: 403 aaagtttggcctccaccaaacagcaacacactcaccaacctgccagttaggtggaaatga 462 |||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||| || Sbjct: 514 aaagttcggcctccaccacacagcaacgcactctccaacctgccagttaggtggaaagga 455 Query: 463 aggtgagttcactgcaagtttgctgcacagctttcttttcaggccctcaatttcattttc 522 ||| |||||||| |||||||||||||| | ||||||||||| ||||| ||||||||||| Sbjct: 454 aggcgagttcacagcaagtttgctgcataactttcttttcaaaccctcgatttcattttc 395 Query: 523 tccaggcttcaaacgtccaccaggaagtttgcaaaatgtgtttccaatttgcaataacag 582 |||||||||||| |||||||||||||||||||| ||||| || || ||||||| | ||| Sbjct: 394 tccaggcttcaaccgtccaccaggaagtttgcagaatgtattaccgatttgcaggagcag 335 Query: 583 tatgtgggggtgattgtgctcttgcaccagtaggatagcttcaacacttgtccgcattcc 642 |||||| || || |||||||||||||||| |||||| |||||||||||||| |||||||| Sbjct: 334 tatgtgaggatggttgtgctcttgcaccaataggattgcttcaacacttgtacgcattcc 275 Query: 643 ttctttcatgtagttgaccttcatgcgggcgaggcggtcggcgacgggaggtgtccttct 702 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 274 ttctttcatgtagttgaccttcatgcgagcgaggcggtcggcgac-ggaggtgtccttct 216 Query: 703 ccatcttgggctccttggtgccgaacgtgtagttggcgagcgggta 748 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 ccatcttgggctccttggtgccgaacgtgtagttggcgagcgggta 170
>gb|BT018459.1| Zea mays clone EL01N0413H10.d mRNA sequence Length = 1316 Score = 662 bits (334), Expect = 0.0 Identities = 526/586 (89%), Gaps = 3/586 (0%) Strand = Plus / Minus Query: 163 tcatcacccttacgagctcaccatgttgaactggaacctagacagctgctgtgggatggt 222 |||||||||| | ||||| ||||||||||||||||||||||| |||||||| ||| |||| Sbjct: 1177 tcatcaccctaa-gagctaaccatgttgaactggaacctagaaagctgctgcggggtggt 1119 Query: 223 ggaaattacaggtccataccgctgaacattgtcatagagttcaaacagtggaacagcaag 282 || || ||||| || ||||||||||||||||| ||||| | ||||||||||||||| Sbjct: 1118 agagatgacaggcccgtaccgctgaacattgtcgtagaggggga-cagtggaacagcaag 1060 Query: 283 tagcttcaagttccttggaacagcgaaatactctctttcagttagatgaacaatgaaaag 342 || |||| |||||||||||||| |||||||||||||| | ||| |||||||||||||| Sbjct: 1059 cagtttcagattccttggaacagcaaaatactctctttcggataggtgaacaatgaaaag 1000 Query: 343 cttcttgcattccttgggcttggttatatgtggagggcaataaggatacatcacggtctc 402 |||||||| ||||||||||| || ||||||||||| || |||||||||||||| ||||| Sbjct: 999 tttcttgcactccttgggcttagtgatatgtggaggacagtaaggatacatcacagtctc 940 Query: 403 aaagtttggcctccaccaaacagcaacacactcaccaacctgccagttaggtggaaatga 462 |||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||| || Sbjct: 939 aaagttcggcctccaccacacagcaacgcactctccaacctgccagttaggtggaaagga 880 Query: 463 aggtgagttcactgcaagtttgctgcacagctttcttttcaggccctcaatttcattttc 522 ||| |||||||| |||||||||||||| | ||||||||||| ||||| ||||||||||| Sbjct: 879 aggcgagttcacagcaagtttgctgcataactttcttttcaaaccctcgatttcattttc 820 Query: 523 tccaggcttcaaacgtccaccaggaagtttgcaaaatgtgtttccaatttgcaataacag 582 |||||||||||| |||||||||||||||||||| ||||| || || ||||||| | ||| Sbjct: 819 tccaggcttcaaccgtccaccaggaagtttgcagaatgtattcccgatttgcaggagcag 760 Query: 583 tatgtgggggtgattgtgctcttgcaccagtaggatagcttcaacacttgtccgcattcc 642 |||||| || || |||||||||||||||| |||||| |||||||||||||| |||||||| Sbjct: 759 tatgtgaggatggttgtgctcttgcaccaataggattgcttcaacacttgtacgcattcc 700 Query: 643 ttctttcatgtagttgaccttcatgcgggcgaggcggtcggcgacgggaggtgtccttct 702 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 699 ttctttcatgtagttgaccttcatacgggcgaggcggtcggcgac-ggaggtgtccttct 641 Query: 703 ccatcttgggctccttggtgccgaacgtgtagttggcgagcgggta 748 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 ccatcttgggctccttggtgccgaacgtgtagttggcgagcgggta 595
>gb|BT012871.1| Lycopersicon esculentum clone 113969R, mRNA sequence Length = 1037 Score = 305 bits (154), Expect = 1e-79 Identities = 443/538 (82%), Gaps = 1/538 (0%) Strand = Plus / Minus Query: 184 catgttgaactggaacctagacagctgctgtgggatggtggaaattacaggtccataccg 243 |||||||||||||||||| || ||||| || || || ||||| || ||||||||||| | Sbjct: 788 catgttgaactggaacctggaaagctgttgaggaatcgtggatatcacaggtccatatct 729 Query: 244 ctgaacattgtcatagagttcaaacagtggaacagcaagtagcttcaagttccttggaac 303 ||||||||||||||| |||||||||| ||| || ||||| ||||||| || |||| || Sbjct: 728 ctgaacattgtcataaagttcaaacaatggcactgcaagaagcttcagattttttgggac 669 Query: 304 agcgaaatactctctttcagttagatgaacaatgaaaagcttcttgcattccttgggctt 363 ||| || ||||||||||||| ||||||||||| ||| |||||||| || |||||||| || Sbjct: 668 agcaaagtactctctttcagatagatgaacaacgaagagcttcttacactccttgggttt 609 Query: 364 ggttatatgtggagggcaataaggatacatcacggtctcaaagtttggcctccaccaaac 423 ||||| |||||||| ||||| |||||||| | ||| ||||| |||||||||||||| | Sbjct: 608 tgttatgtgtggaggacaatatggatacattatggtttcaaaatttggcctccaccagat 549 Query: 424 agcaacacactcaccaacctgccagttaggtggaaatgaaggtgagttcactgcaagttt 483 || ||||||||||| |||||||| || || ||| ||| || || |||||||||| Sbjct: 548 ggccacacactcacctacctgccaatttggctgaatgccaggagaattagctgcaagttt 489 Query: 484 gctgcacagctttcttttcaggccctcaatttcattttctccaggcttcaaacgtccacc 543 || |||| || ||||||| || |||||||| || ||||| || |||||||||||||| Sbjct: 488 actagacagtttccttttcaaaccttcaatttcgttctctcctggtttcaaacgtccacc 429 Query: 544 aggaagtttgcaaaatgtgtttccaatttgcaataacagtatgtgggggtgattgtgctc 603 ||||||||||| |||||||| ||||||||||||| || ||||| || |||||||| || Sbjct: 428 tggaagtttgcagaatgtgttcccaatttgcaatagaagaatgtgaggatgattgtgttc 369 Query: 604 ttgcaccagtaggatagcttcaacacttgtccgcattccttctttcatgtagttgacctt 663 ||| |||| ||| || ||||||| || |||| ||| || || ||| | |||||||| || Sbjct: 368 ttgtaccaatagaattccttcaacgctagtcctcatgccctccttcgtatagttgacttt 309 Query: 664 catgcgggcgaggcggtcggcgacgggaggtgtccttctccatcttgggctccttggt 721 ||| || || ||||| |||||||| |||||||||||| ||||| |||||||||||||| Sbjct: 308 catacgagcaaggcgatcggcgac-ggaggtgtccttttccattttgggctccttggt 252
>emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F12, complete sequence Length = 84361 Score = 168 bits (85), Expect = 2e-38 Identities = 92/93 (98%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 656 ttgaccttcatgcgggcgaggcggtcggcgacgggaggtgtccttctccatcttgggctc 715 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 972 ttgaccttcatgcgggcgaggcggtcggcgacgg-aggtgtccttctccatcttgggctc 1030 Query: 716 cttggtgccgaacgtgtagttggcgagcgggta 748 ||||||||||||||||||||||||||||||||| Sbjct: 1031 cttggtgccgaacgtgtagttggcgagcgggta 1063 Score = 73.8 bits (37), Expect = 7e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 607 caccagtaggatagcttcaacacttgtccgcattccttctttcatgtag 655 ||||| |||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 214 caccaataggattgcttcaacactggtccgcattccttctttcatgtag 262 Score = 63.9 bits (32), Expect = 7e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 551 ttgcaaaatgtgtttccaatttgcaataacagtatgtgggggtgattgtgctcttgcacc 610 ||||||||||| || ||||||||||| | |||||||||||| || ||||| ||||||||| Sbjct: 5 ttgcaaaatgtattaccaatttgcaacagcagtatgtggggatggttgtgttcttgcacc 64
>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete sequence Length = 115564 Score = 168 bits (85), Expect = 2e-38 Identities = 92/93 (98%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 656 ttgaccttcatgcgggcgaggcggtcggcgacgggaggtgtccttctccatcttgggctc 715 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 95919 ttgaccttcatgcgggcgaggcggtcggcgacgg-aggtgtccttctccatcttgggctc 95977 Query: 716 cttggtgccgaacgtgtagttggcgagcgggta 748 ||||||||||||||||||||||||||||||||| Sbjct: 95978 cttggtgccgaacgtgtagttggcgagcgggta 96010 Score = 161 bits (81), Expect = 4e-36 Identities = 105/113 (92%) Strand = Plus / Plus Query: 244 ctgaacattgtcatagagttcaaacagtggaacagcaagtagcttcaagttccttggaac 303 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||| ||||| Sbjct: 93575 ctgaacgttgtcatagagttcaaacagtggaacagcaagcagcttcaggttcctcggaac 93634 Query: 304 agcgaaatactctctttcagttagatgaacaatgaaaagcttcttgcattcct 356 ||| |||||||||||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 93635 agcaaaatactctctttcagataggtgaacaatgaaaagcttcttgcactcct 93687 Score = 149 bits (75), Expect = 2e-32 Identities = 87/91 (95%) Strand = Plus / Plus Query: 354 ccttgggcttggttatatgtggagggcaataaggatacatcacggtctcaaagtttggcc 413 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 93967 ccttgggcttggttatatgtggagggcagtaaggatacatcacagtctcaaagtttggcc 94026 Query: 414 tccaccaaacagcaacacactcaccaacctg 444 ||||||| |||||||||||||| |||||||| Sbjct: 94027 tccaccatacagcaacacactctccaacctg 94057 Score = 125 bits (63), Expect = 2e-25 Identities = 87/95 (91%) Strand = Plus / Plus Query: 516 cattttctccaggcttcaaacgtccaccaggaagtttgcaaaatgtgtttccaatttgca 575 |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| Sbjct: 94917 cattttctccaggcttcaaacgtccaccaggaagcttgcaaaatgtattaccaatttgca 94976 Query: 576 ataacagtatgtgggggtgattgtgctcttgcacc 610 | | |||||||||||| || ||||| ||||||||| Sbjct: 94977 acagcagtatgtggggatggttgtgttcttgcacc 95011 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 161 tctcatcacccttacgagctcaccatgttgaactggaacctagacagctgctgtgggatg 220 |||||||||| | ||||||| |||||||||||||||||||||||||||||||| || ||| Sbjct: 92897 tctcatcaccttcacgagctaaccatgttgaactggaacctagacagctgctgcggaatg 92956 Query: 221 gtggaaattacaggtccataccgctg 246 |||||||| || || ||||| ||||| Sbjct: 92957 gtggaaatgactggcccatatcgctg 92982 Score = 97.6 bits (49), Expect = 5e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 440 acctgccagttaggtggaaatgaaggtgagttcactgcaagtttgctgcacagctttctt 499 |||||||||||||||||||| ||||| |||||||||||||| || ||||| | ||||||| Sbjct: 94745 acctgccagttaggtggaaaggaaggcgagttcactgcaagcttactgcataactttctt 94804 Query: 500 ttcaggccctcaatttc 516 ||||| ||||||||||| Sbjct: 94805 ttcagaccctcaatttc 94821 Score = 73.8 bits (37), Expect = 7e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 607 caccagtaggatagcttcaacacttgtccgcattccttctttcatgtag 655 ||||| |||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 95161 caccaataggattgcttcaacactggtccgcattccttctttcatgtag 95209
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06, complete sequence Length = 148023 Score = 161 bits (81), Expect = 4e-36 Identities = 91/93 (97%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 656 ttgaccttcatgcgggcgaggcggtcggcgacgggaggtgtccttctccatcttgggctc 715 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 122510 ttgaccttcatgcgggcgaagcggtcggcgacgg-aggtgtccttctccatcttgggctc 122568 Query: 716 cttggtgccgaacgtgtagttggcgagcgggta 748 ||||||||||||||||||||||||||||||||| Sbjct: 122569 cttggtgccgaacgtgtagttggcgagcgggta 122601 Score = 161 bits (81), Expect = 4e-36 Identities = 105/113 (92%) Strand = Plus / Plus Query: 244 ctgaacattgtcatagagttcaaacagtggaacagcaagtagcttcaagttccttggaac 303 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||| ||||| Sbjct: 120168 ctgaacgttgtcatagagttcaaacagtggaacagcaagcagcttcaggttcctcggaac 120227 Query: 304 agcgaaatactctctttcagttagatgaacaatgaaaagcttcttgcattcct 356 ||| |||||||||||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 120228 agcaaaatactctctttcagataggtgaacaatgaaaagcttcttgcactcct 120280 Score = 149 bits (75), Expect = 2e-32 Identities = 87/91 (95%) Strand = Plus / Plus Query: 354 ccttgggcttggttatatgtggagggcaataaggatacatcacggtctcaaagtttggcc 413 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 120560 ccttgggcttggttatatgtggagggcagtaaggatacatcacagtctcaaagtttggcc 120619 Query: 414 tccaccaaacagcaacacactcaccaacctg 444 ||||||| |||||||||||||| |||||||| Sbjct: 120620 tccaccatacagcaacacactctccaacctg 120650 Score = 125 bits (63), Expect = 2e-25 Identities = 87/95 (91%) Strand = Plus / Plus Query: 516 cattttctccaggcttcaaacgtccaccaggaagtttgcaaaatgtgtttccaatttgca 575 |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| Sbjct: 121510 cattttctccaggcttcaaacgtccaccaggaagcttgcaaaatgtattaccaatttgca 121569 Query: 576 ataacagtatgtgggggtgattgtgctcttgcacc 610 | | |||||||||||| || ||||| ||||||||| Sbjct: 121570 acagcagtatgtggggatggttgtgttcttgcacc 121604 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 161 tctcatcacccttacgagctcaccatgttgaactggaacctagacagctgctgtgggatg 220 |||||||||| | ||||||| |||||||||||||||||||||||||||||||| || ||| Sbjct: 119488 tctcatcaccttcacgagctaaccatgttgaactggaacctagacagctgctgcggaatg 119547 Query: 221 gtggaaattacaggtccataccgctg 246 |||||||| || || ||||| ||||| Sbjct: 119548 gtggaaatgactggcccatatcgctg 119573 Score = 97.6 bits (49), Expect = 5e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 440 acctgccagttaggtggaaatgaaggtgagttcactgcaagtttgctgcacagctttctt 499 |||||||||||||||||||| ||||| |||||||||||||| || ||||| | ||||||| Sbjct: 121338 acctgccagttaggtggaaaggaaggcgagttcactgcaagcttactgcataactttctt 121397 Query: 500 ttcaggccctcaatttc 516 ||||| ||||||||||| Sbjct: 121398 ttcagaccctcaatttc 121414 Score = 73.8 bits (37), Expect = 7e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 607 caccagtaggatagcttcaacacttgtccgcattccttctttcatgtag 655 ||||| |||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 121754 caccaataggattgcttcaacactggtccgcattccttctttcatgtag 121802
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 161 bits (81), Expect = 4e-36 Identities = 91/93 (97%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 656 ttgaccttcatgcgggcgaggcggtcggcgacgggaggtgtccttctccatcttgggctc 715 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 34916397 ttgaccttcatgcgggcgaagcggtcggcgacgg-aggtgtccttctccatcttgggctc 34916455 Query: 716 cttggtgccgaacgtgtagttggcgagcgggta 748 ||||||||||||||||||||||||||||||||| Sbjct: 34916456 cttggtgccgaacgtgtagttggcgagcgggta 34916488 Score = 161 bits (81), Expect = 4e-36 Identities = 105/113 (92%) Strand = Plus / Plus Query: 244 ctgaacattgtcatagagttcaaacagtggaacagcaagtagcttcaagttccttggaac 303 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||| ||||| Sbjct: 34914055 ctgaacgttgtcatagagttcaaacagtggaacagcaagcagcttcaggttcctcggaac 34914114 Query: 304 agcgaaatactctctttcagttagatgaacaatgaaaagcttcttgcattcct 356 ||| |||||||||||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 34914115 agcaaaatactctctttcagataggtgaacaatgaaaagcttcttgcactcct 34914167 Score = 149 bits (75), Expect = 2e-32 Identities = 87/91 (95%) Strand = Plus / Plus Query: 354 ccttgggcttggttatatgtggagggcaataaggatacatcacggtctcaaagtttggcc 413 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 34914447 ccttgggcttggttatatgtggagggcagtaaggatacatcacagtctcaaagtttggcc 34914506 Query: 414 tccaccaaacagcaacacactcaccaacctg 444 ||||||| |||||||||||||| |||||||| Sbjct: 34914507 tccaccatacagcaacacactctccaacctg 34914537 Score = 125 bits (63), Expect = 2e-25 Identities = 87/95 (91%) Strand = Plus / Plus Query: 516 cattttctccaggcttcaaacgtccaccaggaagtttgcaaaatgtgtttccaatttgca 575 |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| Sbjct: 34915397 cattttctccaggcttcaaacgtccaccaggaagcttgcaaaatgtattaccaatttgca 34915456 Query: 576 ataacagtatgtgggggtgattgtgctcttgcacc 610 | | |||||||||||| || ||||| ||||||||| Sbjct: 34915457 acagcagtatgtggggatggttgtgttcttgcacc 34915491 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 161 tctcatcacccttacgagctcaccatgttgaactggaacctagacagctgctgtgggatg 220 |||||||||| | ||||||| |||||||||||||||||||||||||||||||| || ||| Sbjct: 34913375 tctcatcaccttcacgagctaaccatgttgaactggaacctagacagctgctgcggaatg 34913434 Query: 221 gtggaaattacaggtccataccgctg 246 |||||||| || || ||||| ||||| Sbjct: 34913435 gtggaaatgactggcccatatcgctg 34913460 Score = 97.6 bits (49), Expect = 5e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 440 acctgccagttaggtggaaatgaaggtgagttcactgcaagtttgctgcacagctttctt 499 |||||||||||||||||||| ||||| |||||||||||||| || ||||| | ||||||| Sbjct: 34915225 acctgccagttaggtggaaaggaaggcgagttcactgcaagcttactgcataactttctt 34915284 Query: 500 ttcaggccctcaatttc 516 ||||| ||||||||||| Sbjct: 34915285 ttcagaccctcaatttc 34915301 Score = 73.8 bits (37), Expect = 7e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 607 caccagtaggatagcttcaacacttgtccgcattccttctttcatgtag 655 ||||| |||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 34915641 caccaataggattgcttcaacactggtccgcattccttctttcatgtag 34915689
>ref|NM_118687.2| Arabidopsis thaliana unknown protein AT4G25550 mRNA, complete cds Length = 1041 Score = 151 bits (76), Expect = 4e-33 Identities = 215/260 (82%), Gaps = 1/260 (0%) Strand = Plus / Minus Query: 477 caagtttgctgcacagctttcttttcaggccctcaatttcattttctccaggcttcaaac 536 ||||||| ||| ||||||||||||||| || ||| ||||||||| |||||||||| | Sbjct: 440 caagtttactggtcagctttcttttcagaccatcagcttcattttcaccaggcttcaggc 381 Query: 537 gtccaccaggaagtttgcaaaatgtgtttccaatttgcaataacagtatgtgggggtgat 596 ||||||| ||||||||||| |||||||| |||||||| | | ||||| || || || | Sbjct: 380 gtccacctggaagtttgcagaatgtgttaccaatttgtagcagaagtatatgaggatggt 321 Query: 597 tgtgctcttgcaccagtaggatagcttcaacacttgtccgcattccttctttcatgtagt 656 |||| |||||||||||||| || ||||||| || |||| ||| || |||||||| |||| Sbjct: 320 tgtgttcttgcaccagtagaatcccttcaacgctagtcctcatgccctctttcatatagt 261 Query: 657 tgaccttcatgcgggcgaggcggtcggcgacgggaggtgtccttctccatcttgggctcc 716 ||| ||||| || ||||| ||||||||||| |||||||||||| |||| |||||| ||| Sbjct: 260 tgattttcatacgagcgagccggtcggcgac-ggaggtgtccttttccagcttgggttcc 202 Query: 717 ttggtgccgaacgtgtagtt 736 || || ||||| ||||||| Sbjct: 201 ttagttccgaagctgtagtt 182 Score = 81.8 bits (41), Expect = 3e-12 Identities = 188/237 (79%) Strand = Plus / Minus Query: 184 catgttgaactggaacctagacagctgctgtgggatggtggaaattacaggtccataccg 243 ||||||||| ||||| || || |||||||| || ||||| || || || |||||||| | Sbjct: 733 catgttgaaatggaatctggatagctgctgcggaatggttgatataaccggtccatatct 674 Query: 244 ctgaacattgtcatagagttcaaacagtggaacagcaagtagcttcaagttccttggaac 303 ||||||||||||||||||||| |||| || || || | |||||||| || | || || Sbjct: 673 ctgaacattgtcatagagttcgaacaaagggacggccaagagcttcaaatttttgggcac 614 Query: 304 agcgaaatactctctttcagttagatgaacaatgaaaagcttcttgcattccttgggctt 363 ||| || |||||| | |||| | ||||||||| | || ||||||||||||| || || Sbjct: 613 agcaaagtactctttctcagacaagtgaacaatgtagagtctcttgcattcctttggttt 554 Query: 364 ggttatatgtggagggcaataaggatacatcacggtctcaaagtttggcctccacca 420 || || || ||||||||||| || ||||||| ||| ||||||||||| | |||||| Sbjct: 553 cgtgatgtgaggagggcaatacgggtacatcatggtttcaaagtttggacgccacca 497
>emb|BX828932.1|CNS0A2IL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL52ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1001 Score = 151 bits (76), Expect = 4e-33 Identities = 215/260 (82%), Gaps = 1/260 (0%) Strand = Plus / Minus Query: 477 caagtttgctgcacagctttcttttcaggccctcaatttcattttctccaggcttcaaac 536 ||||||| ||| ||||||||||||||| || ||| ||||||||| |||||||||| | Sbjct: 421 caagtttactggtcagctttcttttcagaccatcagcttcattttcaccaggcttcaggc 362 Query: 537 gtccaccaggaagtttgcaaaatgtgtttccaatttgcaataacagtatgtgggggtgat 596 ||||||| ||||||||||| |||||||| |||||||| | | ||||| || || || | Sbjct: 361 gtccacctggaagtttgcagaatgtgttaccaatttgtagcagaagtatatgaggatggt 302 Query: 597 tgtgctcttgcaccagtaggatagcttcaacacttgtccgcattccttctttcatgtagt 656 |||| |||||||||||||| || ||||||| || |||| ||| || |||||||| |||| Sbjct: 301 tgtgttcttgcaccagtagaatcccttcaacgctagtcctcatgccctctttcatatagt 242 Query: 657 tgaccttcatgcgggcgaggcggtcggcgacgggaggtgtccttctccatcttgggctcc 716 ||| ||||| || ||||| ||||||||||| |||||||||||| |||| |||||| ||| Sbjct: 241 tgattttcatacgagcgagccggtcggcgac-ggaggtgtccttttccagcttgggttcc 183 Query: 717 ttggtgccgaacgtgtagtt 736 || || ||||| ||||||| Sbjct: 182 ttagttccgaagctgtagtt 163 Score = 56.0 bits (28), Expect = 2e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 345 tcttgcattccttgggcttggttatatgtggagggcaataaggatacatcacggtctcaa 404 ||||||||||||| || || || || || ||||||||||| || ||||||| ||| |||| Sbjct: 553 tcttgcattcctttggtttcgtgatgtgaggagggcaatacgggtacatcatggtttcaa 494 Query: 405 agtttggcctccacca 420 ||||||| | |||||| Sbjct: 493 agtttggacgccacca 478 Score = 50.1 bits (25), Expect = 0.011 Identities = 34/37 (91%) Strand = Plus / Minus Query: 233 ggtccataccgctgaacattgtcatagagttcaaaca 269 |||||||| | ||||||||||||||||||||| |||| Sbjct: 666 ggtccatatctctgaacattgtcatagagttcgaaca 630
>gb|BT005519.1| Arabidopsis thaliana clone U50693 unknown protein (At4g25550) mRNA, complete cds Length = 634 Score = 151 bits (76), Expect = 4e-33 Identities = 215/260 (82%), Gaps = 1/260 (0%) Strand = Plus / Minus Query: 477 caagtttgctgcacagctttcttttcaggccctcaatttcattttctccaggcttcaaac 536 ||||||| ||| ||||||||||||||| || ||| ||||||||| |||||||||| | Sbjct: 298 caagtttactggtcagctttcttttcagaccatcagcttcattttcaccaggcttcaggc 239 Query: 537 gtccaccaggaagtttgcaaaatgtgtttccaatttgcaataacagtatgtgggggtgat 596 ||||||| ||||||||||| |||||||| |||||||| | | ||||| || || || | Sbjct: 238 gtccacctggaagtttgcagaatgtgttaccaatttgtagcagaagtatatgaggatggt 179 Query: 597 tgtgctcttgcaccagtaggatagcttcaacacttgtccgcattccttctttcatgtagt 656 |||| |||||||||||||| || ||||||| || |||| ||| || |||||||| |||| Sbjct: 178 tgtgttcttgcaccagtagaatcccttcaacgctagtcctcatgccctctttcatatagt 119 Query: 657 tgaccttcatgcgggcgaggcggtcggcgacgggaggtgtccttctccatcttgggctcc 716 ||| ||||| || ||||| ||||||||||| |||||||||||| |||| |||||| ||| Sbjct: 118 tgattttcatacgagcgagccggtcggcgac-ggaggtgtccttttccagcttgggttcc 60 Query: 717 ttggtgccgaacgtgtagtt 736 || || ||||| ||||||| Sbjct: 59 ttagttccgaagctgtagtt 40 Score = 81.8 bits (41), Expect = 3e-12 Identities = 188/237 (79%) Strand = Plus / Minus Query: 184 catgttgaactggaacctagacagctgctgtgggatggtggaaattacaggtccataccg 243 ||||||||| ||||| || || |||||||| || ||||| || || || |||||||| | Sbjct: 591 catgttgaaatggaatctggatagctgctgcggaatggttgatataaccggtccatatct 532 Query: 244 ctgaacattgtcatagagttcaaacagtggaacagcaagtagcttcaagttccttggaac 303 ||||||||||||||||||||| |||| || || || | |||||||| || | || || Sbjct: 531 ctgaacattgtcatagagttcgaacaaagggacggccaagagcttcaaatttttgggcac 472 Query: 304 agcgaaatactctctttcagttagatgaacaatgaaaagcttcttgcattccttgggctt 363 ||| || |||||| | |||| | ||||||||| | || ||||||||||||| || || Sbjct: 471 agcaaagtactctttctcagacaagtgaacaatgtagagtctcttgcattcctttggttt 412 Query: 364 ggttatatgtggagggcaataaggatacatcacggtctcaaagtttggcctccacca 420 || || || ||||||||||| || ||||||| ||| ||||||||||| | |||||| Sbjct: 411 cgtgatgtgaggagggcaatacgggtacatcatggtttcaaagtttggacgccacca 355
>dbj|AK118070.1| Arabidopsis thaliana At4g25550 mRNA for unknown protein, complete cds, clone: RAFL19-31-N23 Length = 972 Score = 151 bits (76), Expect = 4e-33 Identities = 215/260 (82%), Gaps = 1/260 (0%) Strand = Plus / Minus Query: 477 caagtttgctgcacagctttcttttcaggccctcaatttcattttctccaggcttcaaac 536 ||||||| ||| ||||||||||||||| || ||| ||||||||| |||||||||| | Sbjct: 440 caagtttactggtcagctttcttttcagaccatcagcttcattttcaccaggcttcaggc 381 Query: 537 gtccaccaggaagtttgcaaaatgtgtttccaatttgcaataacagtatgtgggggtgat 596 ||||||| ||||||||||| |||||||| |||||||| | | ||||| || || || | Sbjct: 380 gtccacctggaagtttgcagaatgtgttaccaatttgtagcagaagtatatgaggatggt 321 Query: 597 tgtgctcttgcaccagtaggatagcttcaacacttgtccgcattccttctttcatgtagt 656 |||| |||||||||||||| || ||||||| || |||| ||| || |||||||| |||| Sbjct: 320 tgtgttcttgcaccagtagaatcccttcaacgctagtcctcatgccctctttcatatagt 261 Query: 657 tgaccttcatgcgggcgaggcggtcggcgacgggaggtgtccttctccatcttgggctcc 716 ||| ||||| || ||||| ||||||||||| |||||||||||| |||| |||||| ||| Sbjct: 260 tgattttcatacgagcgagccggtcggcgac-ggaggtgtccttttccagcttgggttcc 202 Query: 717 ttggtgccgaacgtgtagtt 736 || || ||||| ||||||| Sbjct: 201 ttagttccgaagctgtagtt 182 Score = 81.8 bits (41), Expect = 3e-12 Identities = 188/237 (79%) Strand = Plus / Minus Query: 184 catgttgaactggaacctagacagctgctgtgggatggtggaaattacaggtccataccg 243 ||||||||| ||||| || || |||||||| || ||||| || || || |||||||| | Sbjct: 733 catgttgaaatggaatctggatagctgctgcggaatggttgatataaccggtccatatct 674 Query: 244 ctgaacattgtcatagagttcaaacagtggaacagcaagtagcttcaagttccttggaac 303 ||||||||||||||||||||| |||| || || || | |||||||| || | || || Sbjct: 673 ctgaacattgtcatagagttcgaacaaagggacggccaagagcttcaaatttttgggcac 614 Query: 304 agcgaaatactctctttcagttagatgaacaatgaaaagcttcttgcattccttgggctt 363 ||| || |||||| | |||| | ||||||||| | || ||||||||||||| || || Sbjct: 613 agcaaagtactctttctcagacaagtgaacaatgtagagtctcttgcattcctttggttt 554 Query: 364 ggttatatgtggagggcaataaggatacatcacggtctcaaagtttggcctccacca 420 || || || ||||||||||| || ||||||| ||| ||||||||||| | |||||| Sbjct: 553 cgtgatgtgaggagggcaatacgggtacatcatggtttcaaagtttggacgccacca 497
>dbj|AK220576.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-95-A13 Length = 598 Score = 73.8 bits (37), Expect = 7e-10 Identities = 107/129 (82%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 608 accagtaggatagcttcaacacttgtccgcattccttctttcatgtagttgaccttcatg 667 |||||||| || ||||||| || |||| ||| || |||||||| ||||||| ||||| Sbjct: 309 accagtagaatcccttcaacgctagtcctcatgccctctttcatatagttgattttcata 250 Query: 668 cgggcgaggcggtcggcgacgggaggtgtccttctccatcttgggctccttggtgccgaa 727 || ||||| ||||||||||| |||||||||||| |||| |||||| ||||| || ||||| Sbjct: 249 cgagcgagccggtcggcgac-ggaggtgtccttttccagcttgggttccttagttccgaa 191 Query: 728 cgtgtagtt 736 ||||||| Sbjct: 190 gctgtagtt 182
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 69.9 bits (35), Expect = 1e-08 Identities = 84/99 (84%), Gaps = 6/99 (6%) Strand = Plus / Minus Query: 656 ttgaccttcatgcgggcgaggcggtcggc-gacgg-----gaggtgtccttctccatctt 709 |||||||||||||||||||||| |||| | | ||| |||||| || | |||||| | Sbjct: 21567159 ttgaccttcatgcgggcgaggcagtcgccggtcggtgacagaggtgcccctttccatcct 21567100 Query: 710 gggctccttggtgccgaacgtgtagttggcgagcgggta 748 |||||||||||| |||||||||||| ||||||||||||| Sbjct: 21567099 gggctccttggtaccgaacgtgtagctggcgagcgggta 21567061
>dbj|AP004235.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0006G05 Length = 56865 Score = 69.9 bits (35), Expect = 1e-08 Identities = 84/99 (84%), Gaps = 6/99 (6%) Strand = Plus / Minus Query: 656 ttgaccttcatgcgggcgaggcggtcggc-gacgg-----gaggtgtccttctccatctt 709 |||||||||||||||||||||| |||| | | ||| |||||| || | |||||| | Sbjct: 13533 ttgaccttcatgcgggcgaggcagtcgccggtcggtgacagaggtgcccctttccatcct 13474 Query: 710 gggctccttggtgccgaacgtgtagttggcgagcgggta 748 |||||||||||| |||||||||||| ||||||||||||| Sbjct: 13473 gggctccttggtaccgaacgtgtagctggcgagcgggta 13435
>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63 Length = 198777 Score = 67.9 bits (34), Expect = 5e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 516 cattttctccaggcttcaaacgtccaccaggaagtttgcaaaatgtgtttccaatttg 573 ||||||| |||||||||| |||||||| ||||||||||| |||||||| |||||||| Sbjct: 132182 cattttcaccaggcttcaggcgtccacctggaagtttgcagaatgtgttaccaatttg 132125 Score = 54.0 bits (27), Expect = 7e-04 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 662 ttcatgcgggcgaggcggtcggcgacgggaggtgtccttctccatcttgggctccttggt 721 ||||| || ||||| ||||||||||||| |||||||||| |||| |||||| ||||| || Sbjct: 130870 ttcatacgagcgagccggtcggcgacgg-aggtgtccttttccagcttgggttccttagt 130812 Query: 722 gccgaacgtgtagtt 736 ||||| ||||||| Sbjct: 130811 tccgaagctgtagtt 130797 Score = 46.1 bits (23), Expect = 0.17 Identities = 41/47 (87%) Strand = Plus / Minus Query: 374 ggagggcaataaggatacatcacggtctcaaagtttggcctccacca 420 ||||||||||| || ||||||| ||| ||||||||||| | |||||| Sbjct: 132744 ggagggcaatacgggtacatcatggtttcaaagtttggacgccacca 132698 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Minus Query: 244 ctgaacattgtcatagagttcaaaca 269 ||||||||||||||||||||| |||| Sbjct: 132957 ctgaacattgtcatagagttcgaaca 132932
>emb|AL022197.2|ATM7J2 Arabidopsis thaliana DNA chromosome 4, P1 clone M7J2 (ESSA project) Length = 80386 Score = 67.9 bits (34), Expect = 5e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 516 cattttctccaggcttcaaacgtccaccaggaagtttgcaaaatgtgtttccaatttg 573 ||||||| |||||||||| |||||||| ||||||||||| |||||||| |||||||| Sbjct: 22636 cattttcaccaggcttcaggcgtccacctggaagtttgcagaatgtgttaccaatttg 22693 Score = 54.0 bits (27), Expect = 7e-04 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 662 ttcatgcgggcgaggcggtcggcgacgggaggtgtccttctccatcttgggctccttggt 721 ||||| || ||||| ||||||||||||| |||||||||| |||| |||||| ||||| || Sbjct: 23948 ttcatacgagcgagccggtcggcgacgg-aggtgtccttttccagcttgggttccttagt 24006 Query: 722 gccgaacgtgtagtt 736 ||||| ||||||| Sbjct: 24007 tccgaagctgtagtt 24021 Score = 46.1 bits (23), Expect = 0.17 Identities = 41/47 (87%) Strand = Plus / Plus Query: 374 ggagggcaataaggatacatcacggtctcaaagtttggcctccacca 420 ||||||||||| || ||||||| ||| ||||||||||| | |||||| Sbjct: 22074 ggagggcaatacgggtacatcatggtttcaaagtttggacgccacca 22120 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 244 ctgaacattgtcatagagttcaaaca 269 ||||||||||||||||||||| |||| Sbjct: 21861 ctgaacattgtcatagagttcgaaca 21886
>gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725 orthologous region Length = 108553 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 516 cattttctccaggcttcaaacgtccaccaggaagtttgcaaaatgtgtttccaatttgca 575 |||||||| ||| ||||| ||| |||||||||||||||||||||| |||| |||||| Sbjct: 19661 cattttctttaggtttcaaccgtgcaccaggaagtttgcaaaatgtatttctggtttgca 19602 Query: 576 ataacagtatgtgggggtgattgtgctcttg 606 | ||||||||| ||||| || |||||||| Sbjct: 19601 ggagcagtatgtgagggtggttctgctcttg 19571
>emb|CR680824.2|CNS0FO9W Tetraodon nigroviridis full-length cDNA Length = 1228 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 711 ggctccttggtgccgaacgtgtagttggcgagcgggta 748 |||||||||||||| || |||||||||| ||||||||| Sbjct: 340 ggctccttggtgccaaatgtgtagttggtgagcgggta 303
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.17 Identities = 41/47 (87%) Strand = Plus / Minus Query: 701 ctccatcttgggctccttggtgccgaacgtgtagttggcgagcgggt 747 |||||||||||||||||||||| ||| | || | |||||||||||| Sbjct: 1207980 ctccatcttgggctccttggtgtcgaccatgcggctggcgagcgggt 1207934
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0542E10 Length = 146196 Score = 46.1 bits (23), Expect = 0.17 Identities = 41/47 (87%) Strand = Plus / Minus Query: 701 ctccatcttgggctccttggtgccgaacgtgtagttggcgagcgggt 747 |||||||||||||||||||||| ||| | || | |||||||||||| Sbjct: 59933 ctccatcttgggctccttggtgtcgaccatgcggctggcgagcgggt 59887
>emb|AL359842.14| Human DNA sequence from clone RP11-388D4 on chromosome 13 Contains a peroxisomal biogenesis factor 12 (PEX12) pseudogene, complete sequence Length = 136943 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 atgctactaattagccagtttg 108 |||||||||||||||||||||| Sbjct: 88527 atgctactaattagccagtttg 88506
>gb|AC010028.8| Drosophila melanogaster 3L BAC RP98-1E20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187489 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Minus Query: 711 ggctccttggtgccgaacgtgtagtt 736 ||||||||||||||||| |||||||| Sbjct: 110641 ggctccttggtgccgaatgtgtagtt 110616
>ref|NM_140051.2| Drosophila melanogaster CG3689-RB (CG3689), mRNA Length = 2202 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Minus Query: 711 ggctccttggtgccgaacgtgtagtt 736 ||||||||||||||||| |||||||| Sbjct: 402 ggctccttggtgccgaatgtgtagtt 377
>gb|AY069791.1| Drosophila melanogaster SD03330 full length cDNA Length = 2256 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Minus Query: 711 ggctccttggtgccgaacgtgtagtt 736 ||||||||||||||||| |||||||| Sbjct: 402 ggctccttggtgccgaatgtgtagtt 377
>gb|AE003552.4| Drosophila melanogaster chromosome 3L, section 33 of 83 of the complete sequence Length = 286770 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Minus Query: 711 ggctccttggtgccgaacgtgtagtt 736 ||||||||||||||||| |||||||| Sbjct: 221238 ggctccttggtgccgaatgtgtagtt 221213
>ref|NM_119128.2| Arabidopsis thaliana unknown protein AT4G29820 mRNA, complete cds Length = 1200 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 384 aaggatacatcacggtctcaaagtttggcctccacca 420 |||||||||||| ||||||||||| || |||||||| Sbjct: 621 aaggatacatcaatgtctcaaagttgggtctccacca 585
>gb|AC103637.11| Mus musculus chromosome 3, clone RP24-376O20, complete sequence Length = 120487 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 187 gttgaactggaacctagacagctgc 211 |||||||| |||||||||||||||| Sbjct: 41081 gttgaacttgaacctagacagctgc 41057
>gb|AC117656.13| Mus musculus chromosome 14, clone RP23-298L3, complete sequence Length = 228361 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 aaacatgtcatgctactaatt 98 ||||||||||||||||||||| Sbjct: 121443 aaacatgtcatgctactaatt 121463
>gb|AC122052.4| Mus musculus BAC clone RP24-462O18 from chromosome 3, complete sequence Length = 171593 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 187 gttgaactggaacctagacagctgc 211 |||||||| |||||||||||||||| Sbjct: 154688 gttgaacttgaacctagacagctgc 154664
>gb|AC084386.2| Mus musculus BAC clone RP23-61O2 from 17, complete sequence Length = 209523 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 701 ctccatcttgggctccttggt 721 ||||||||||||||||||||| Sbjct: 27666 ctccatcttgggctccttggt 27686
>emb|AL121900.26|HSBA379J5 Human DNA sequence from clone RP11-379J5 on chromosome 20 Contains the 3' end of the SEC23B gene for Sec23 (S. cerevisiae) homolog B, two novel genes, the 5' end of the HARS2 gene for histidyl-tRNA synthetase 2, a pseudogene similar to part of homeobox proteins and two CpG islands, complete sequence Length = 149933 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 511 aatttcattttctccaggctt 531 ||||||||||||||||||||| Sbjct: 61970 aatttcattttctccaggctt 61990
>emb|BX908789.1| Neurospora crassa DNA linkage group VII BAC clone B13D24 Length = 107482 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 293 ttccttggaacagcgaaatac 313 ||||||||||||||||||||| Sbjct: 13131 ttccttggaacagcgaaatac 13151
>emb|AL161575.2|ATCHRIV71 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 71 Length = 200001 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 384 aaggatacatcacggtctcaaagtttggcctccacca 420 |||||||||||| ||||||||||| || |||||||| Sbjct: 131143 aaggatacatcaatgtctcaaagttgggtctccacca 131179
>emb|AL050352.1|ATF27B13 Arabidopsis thaliana DNA chromosome 4, BAC clone F27B13 (ESSA project) Length = 98401 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 384 aaggatacatcacggtctcaaagtttggcctccacca 420 |||||||||||| ||||||||||| || |||||||| Sbjct: 21070 aaggatacatcaatgtctcaaagttgggtctccacca 21106
>gb|AC119410.20| Medicago truncatula clone mth2-13n10, complete sequence Length = 108232 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tagatgaacaatgaaaagctt 345 ||||||||||||||||||||| Sbjct: 13382 tagatgaacaatgaaaagctt 13402
>gb|AC006340.5| Arabidopsis thaliana chromosome 2 clone T9I22 map CIC06C07, complete sequence Length = 95375 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 639 ttccttctttcatgtagttga 659 ||||||||||||||||||||| Sbjct: 61498 ttccttctttcatgtagttga 61478
>gb|AY091704.1| Arabidopsis thaliana AT4g29820/F27B13_60 mRNA, complete cds Length = 669 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 384 aaggatacatcacggtctcaaagtttggcctccacca 420 |||||||||||| ||||||||||| || |||||||| Sbjct: 457 aaggatacatcaatgtctcaaagttgggtctccacca 421
>gb|AC155160.4| Mus musculus BAC clone RP24-510B6 from chromosome 17, complete sequence Length = 208376 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 701 ctccatcttgggctccttggt 721 ||||||||||||||||||||| Sbjct: 157139 ctccatcttgggctccttggt 157119
>gb|AY048229.1| Arabidopsis thaliana AT4g29820/F27B13_60 mRNA, complete cds Length = 1193 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 384 aaggatacatcacggtctcaaagtttggcctccacca 420 |||||||||||| ||||||||||| || |||||||| Sbjct: 619 aaggatacatcaatgtctcaaagttgggtctccacca 583
>emb|BX827278.1|CNS0A3PZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS31ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1223 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 384 aaggatacatcacggtctcaaagtttggcctccacca 420 |||||||||||| ||||||||||| || |||||||| Sbjct: 712 aaggatacatcaatgtctcaaagttgggtctccacca 676
>gb|AY085984.1| Arabidopsis thaliana clone 20435 mRNA, complete sequence Length = 1166 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 384 aaggatacatcacggtctcaaagtttggcctccacca 420 |||||||||||| ||||||||||| || |||||||| Sbjct: 621 aaggatacatcaatgtctcaaagttgggtctccacca 585
>dbj|AK174904.1| Ciona intestinalis cDNA, clone:citb040e22, full insert sequence Length = 1072 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 ctcaaagtttggcctccacca 420 ||||||||||||||||||||| Sbjct: 531 ctcaaagtttggcctccacca 511
>emb|CT571248.10| Mouse DNA sequence from clone RP24-355C16 on chromosome 16, complete sequence Length = 136128 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 tgggcttggttatatgtggag 377 ||||||||||||||||||||| Sbjct: 46451 tgggcttggttatatgtggag 46471
>emb|AL139316.5|CNS01DXH Human chromosome 14 DNA sequence BAC R-698F20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192440 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 636 gcattccttctttcatgtagttgac 660 ||||||||||||||||||| ||||| Sbjct: 87989 gcattccttctttcatgtacttgac 87965
>dbj|AB086821.1| Homo sapiens gene for galectin 3, exon 3, partial cds Length = 497 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 636 gcattccttctttcatgtagttgac 660 ||||||||||||||||||| ||||| Sbjct: 436 gcattccttctttcatgtacttgac 460
>dbj|AK112574.1| Ciona intestinalis cDNA, clone:cicl058b07, full insert sequence Length = 1493 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 ctcaaagtttggcctccacca 420 ||||||||||||||||||||| Sbjct: 792 ctcaaagtttggcctccacca 772
>emb|AL929445.8| Mouse DNA sequence from clone RP23-185M22 on chromosome 4, complete sequence Length = 203623 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 343 cttcttgcattccttgggctt 363 ||||||||||||||||||||| Sbjct: 79318 cttcttgcattccttgggctt 79298
>gb|AF031422.1|HSLGALS3S2 Homo sapiens galectin 3 (LGALS3) gene, exons 2 and 3 Length = 1131 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 636 gcattccttctttcatgtagttgac 660 ||||||||||||||||||| ||||| Sbjct: 1048 gcattccttctttcatgtacttgac 1072
>dbj|AP003065.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-31L22, complete sequences Length = 190102 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 520 ttctccaggcttcaaacgtcc 540 ||||||||||||||||||||| Sbjct: 3935 ttctccaggcttcaaacgtcc 3955
>dbj|AP005019.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-169D4, complete sequences Length = 98501 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 520 ttctccaggcttcaaacgtcc 540 ||||||||||||||||||||| Sbjct: 94046 ttctccaggcttcaaacgtcc 94066 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,015,749 Number of Sequences: 3902068 Number of extensions: 7015749 Number of successful extensions: 124138 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 123903 Number of HSP's gapped (non-prelim): 213 length of query: 748 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 725 effective length of database: 17,143,297,704 effective search space: 12428890835400 effective search space used: 12428890835400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)