ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7b16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CP2S1_MOUSE (Q9DBX6) Cytochrome P450 2S1 (EC 1.14.14.1) (CYPIIS1) 32 1.6
2FRIZ4_DROME (Q9NBW1) Protein frizzled-4 precursor (dFz4) 31 2.8
3CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CR... 31 2.8
4RHBT2_MOUSE (Q91V93) Rho-related BTB domain-containing protein 2... 31 2.8
5CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CR... 31 2.8
6CCNT1_HORSE (Q9XT26) Cyclin-T1 (Cyclin-T) (CycT1) 30 6.2
7YOR2_NEIGO (O33369) Hypothetical protein (ORF2) (Fragment) 30 6.2
8PRLR_ORENI (Q91513) Prolactin receptor precursor (PRL-R) 30 6.2
9AKR1_CRYNE (Q5KP49) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Anky... 30 6.2
10ABIL5_ORYSA (Q5JMF2) Probable protein ABIL5 (Abl interactor-like... 30 6.2

>CP2S1_MOUSE (Q9DBX6) Cytochrome P450 2S1 (EC 1.14.14.1) (CYPIIS1)|
          Length = 501

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +3

Query: 66  GISQAWQQANTLSNLILLQLETPFVTVANHIGTAIFFLVIMTPG*SVKTHQRLYQRRTPQ 245
           GIS  W QA  + + +L  L  P   + +H+GT   F +       V+ HQ  +Q   P 
Sbjct: 212 GISSPWGQAYEMFSWLLQPLPGPHTQLQHHLGTLAAFTIQ-----QVQKHQGRFQTSGPA 266

Query: 246 TD 251
            D
Sbjct: 267 RD 268



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>FRIZ4_DROME (Q9NBW1) Protein frizzled-4 precursor (dFz4)|
          Length = 705

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
 Frame = +2

Query: 395 SP*LGHTGMTCASSASTGRG--HQSRGPCCCHWCPEAHQTCPGNHHHGKQRNHGRHLLRR 568
           SP  G   +   S+ S GR   HQ R               P +HHH +Q++H  H    
Sbjct: 617 SPGTGSISLNQMSNYSLGRSVHHQQRHS-------------PHHHHHQQQQHHQFHPHHN 663

Query: 569 TQPRHPSSSRHHVPTGS 619
            Q    SS R + P GS
Sbjct: 664 HQHHSTSSHRLYYPPGS 680



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>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)|
           (Fragment)
          Length = 353

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = +2

Query: 482 HWCPEAHQTCPGNHHHGKQRNHGRHLLRRTQPRHPSSSRHH 604
           H  P  HQT P +H +  Q  H  H     QP H  +  HH
Sbjct: 120 HSHPHQHQTLPPHHPYPHQHQHPAH-HPHPQPHHQQNHPHH 159



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>RHBT2_MOUSE (Q91V93) Rho-related BTB domain-containing protein 2 (Deleted in|
           breast cancer 2 gene protein homolog)
          Length = 728

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 491 PEAHQTCPGNHHHGKQRNHGRHLLRR 568
           PE H++ P  HHH    +HGR  L R
Sbjct: 316 PEDHRSHPEQHHHHHHHHHGRDFLLR 341



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>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)|
          Length = 508

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = +2

Query: 482 HWCPEAHQTCPGNHHHGKQRNHGRHLLRRTQPRHPSSSRHH 604
           H  P  HQT P +H +  Q  H  H     QP H  +  HH
Sbjct: 275 HSHPHQHQTLPPHHPYPHQHQHPAH-HPHPQPHHQQNHPHH 314



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>CCNT1_HORSE (Q9XT26) Cyclin-T1 (Cyclin-T) (CycT1)|
          Length = 727

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +2

Query: 494 EAHQTCPGNHHHGKQRNHGRHLLRRTQPRHPSSSRHHVPTGSCPRHST 637
           E H+T P NHHH    +H  H  + +  + P+ + +  P    P+HS+
Sbjct: 510 EKHKTHPSNHHH----HHNHHSHKHSHSQLPAGTGNKRP--GDPKHSS 551



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>YOR2_NEIGO (O33369) Hypothetical protein (ORF2) (Fragment)|
          Length = 417

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 21/78 (26%), Positives = 32/78 (41%)
 Frame = +2

Query: 404 LGHTGMTCASSASTGRGHQSRGPCCCHWCPEAHQTCPGNHHHGKQRNHGRHLLRRTQPRH 583
           LGHT   C  +A+    H S  P   +  P +  TCP        R H  H    + P  
Sbjct: 313 LGHTAAKCTKNAAPTLPHSSTLP--PNTPPTSSNTCP-TWDPTTFRRHWIHCAANSAPSA 369

Query: 584 PSSSRHHVPTGSCPRHST 637
           P+++ H   + S   +S+
Sbjct: 370 PAAAEHKATSSSNSSNSS 387



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>PRLR_ORENI (Q91513) Prolactin receptor precursor (PRL-R)|
          Length = 630

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
 Frame = -1

Query: 629 DEGKSLSVHDAEMMMGDVAEFYAEDDGRGFVVFHDDDS--QDKSGAP------QDTSGSS 474
           D+GK    HD    +  +      D GRG     D D+   DKSGAP      Q+  G  
Sbjct: 329 DKGKD---HDG--CLKSIGSASDSDSGRGSC---DSDNLLMDKSGAPKEEQQQQNQEGDQ 380

Query: 473 KGRGSGAPCQCWLKKHMSC 417
            G+ +  P + W K+ M C
Sbjct: 381 IGKETQGPKEAWEKEAMPC 399



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>AKR1_CRYNE (Q5KP49) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Ankyrin|
           repeat-containing protein AKR1)
          Length = 776

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = +2

Query: 428 ASSASTGRGHQSRGPCCCHWCPEAHQTCP--GNHHHGKQRNHGRH 556
           A    +G G ++ GP      PE +   P  G H HG Q  HG H
Sbjct: 622 AGIGMSGAGEEAAGPPGAEAGPEGNALLPPPGGHVHGPQCRHGDH 666



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>ABIL5_ORYSA (Q5JMF2) Probable protein ABIL5 (Abl interactor-like protein 5)|
          Length = 254

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 276 STDCRAGAPFKAAHVQLVLAPQDDKANQGSN 368
           +TD ++   F+A  V +VLA    KAN GSN
Sbjct: 212 TTDAKSSFSFRAEDVPIVLAEHRKKANHGSN 242


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,169,747
Number of Sequences: 219361
Number of extensions: 1851156
Number of successful extensions: 6312
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6261
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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