| Clone Name | rbags7b16 |
|---|---|
| Clone Library Name | barley_pub |
>CP2S1_MOUSE (Q9DBX6) Cytochrome P450 2S1 (EC 1.14.14.1) (CYPIIS1)| Length = 501 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = +3 Query: 66 GISQAWQQANTLSNLILLQLETPFVTVANHIGTAIFFLVIMTPG*SVKTHQRLYQRRTPQ 245 GIS W QA + + +L L P + +H+GT F + V+ HQ +Q P Sbjct: 212 GISSPWGQAYEMFSWLLQPLPGPHTQLQHHLGTLAAFTIQ-----QVQKHQGRFQTSGPA 266 Query: 246 TD 251 D Sbjct: 267 RD 268
>FRIZ4_DROME (Q9NBW1) Protein frizzled-4 precursor (dFz4)| Length = 705 Score = 31.2 bits (69), Expect = 2.8 Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 2/77 (2%) Frame = +2 Query: 395 SP*LGHTGMTCASSASTGRG--HQSRGPCCCHWCPEAHQTCPGNHHHGKQRNHGRHLLRR 568 SP G + S+ S GR HQ R P +HHH +Q++H H Sbjct: 617 SPGTGSISLNQMSNYSLGRSVHHQQRHS-------------PHHHHHQQQQHHQFHPHHN 663 Query: 569 TQPRHPSSSRHHVPTGS 619 Q SS R + P GS Sbjct: 664 HQHHSTSSHRLYYPPGS 680
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 31.2 bits (69), Expect = 2.8 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +2 Query: 482 HWCPEAHQTCPGNHHHGKQRNHGRHLLRRTQPRHPSSSRHH 604 H P HQT P +H + Q H H QP H + HH Sbjct: 120 HSHPHQHQTLPPHHPYPHQHQHPAH-HPHPQPHHQQNHPHH 159
>RHBT2_MOUSE (Q91V93) Rho-related BTB domain-containing protein 2 (Deleted in| breast cancer 2 gene protein homolog) Length = 728 Score = 31.2 bits (69), Expect = 2.8 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 491 PEAHQTCPGNHHHGKQRNHGRHLLRR 568 PE H++ P HHH +HGR L R Sbjct: 316 PEDHRSHPEQHHHHHHHHHGRDFLLR 341
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 31.2 bits (69), Expect = 2.8 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +2 Query: 482 HWCPEAHQTCPGNHHHGKQRNHGRHLLRRTQPRHPSSSRHH 604 H P HQT P +H + Q H H QP H + HH Sbjct: 275 HSHPHQHQTLPPHHPYPHQHQHPAH-HPHPQPHHQQNHPHH 314
>CCNT1_HORSE (Q9XT26) Cyclin-T1 (Cyclin-T) (CycT1)| Length = 727 Score = 30.0 bits (66), Expect = 6.2 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +2 Query: 494 EAHQTCPGNHHHGKQRNHGRHLLRRTQPRHPSSSRHHVPTGSCPRHST 637 E H+T P NHHH +H H + + + P+ + + P P+HS+ Sbjct: 510 EKHKTHPSNHHH----HHNHHSHKHSHSQLPAGTGNKRP--GDPKHSS 551
>YOR2_NEIGO (O33369) Hypothetical protein (ORF2) (Fragment)| Length = 417 Score = 30.0 bits (66), Expect = 6.2 Identities = 21/78 (26%), Positives = 32/78 (41%) Frame = +2 Query: 404 LGHTGMTCASSASTGRGHQSRGPCCCHWCPEAHQTCPGNHHHGKQRNHGRHLLRRTQPRH 583 LGHT C +A+ H S P + P + TCP R H H + P Sbjct: 313 LGHTAAKCTKNAAPTLPHSSTLP--PNTPPTSSNTCP-TWDPTTFRRHWIHCAANSAPSA 369 Query: 584 PSSSRHHVPTGSCPRHST 637 P+++ H + S +S+ Sbjct: 370 PAAAEHKATSSSNSSNSS 387
>PRLR_ORENI (Q91513) Prolactin receptor precursor (PRL-R)| Length = 630 Score = 30.0 bits (66), Expect = 6.2 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Frame = -1 Query: 629 DEGKSLSVHDAEMMMGDVAEFYAEDDGRGFVVFHDDDS--QDKSGAP------QDTSGSS 474 D+GK HD + + D GRG D D+ DKSGAP Q+ G Sbjct: 329 DKGKD---HDG--CLKSIGSASDSDSGRGSC---DSDNLLMDKSGAPKEEQQQQNQEGDQ 380 Query: 473 KGRGSGAPCQCWLKKHMSC 417 G+ + P + W K+ M C Sbjct: 381 IGKETQGPKEAWEKEAMPC 399
>AKR1_CRYNE (Q5KP49) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Ankyrin| repeat-containing protein AKR1) Length = 776 Score = 30.0 bits (66), Expect = 6.2 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%) Frame = +2 Query: 428 ASSASTGRGHQSRGPCCCHWCPEAHQTCP--GNHHHGKQRNHGRH 556 A +G G ++ GP PE + P G H HG Q HG H Sbjct: 622 AGIGMSGAGEEAAGPPGAEAGPEGNALLPPPGGHVHGPQCRHGDH 666
>ABIL5_ORYSA (Q5JMF2) Probable protein ABIL5 (Abl interactor-like protein 5)| Length = 254 Score = 30.0 bits (66), Expect = 6.2 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +3 Query: 276 STDCRAGAPFKAAHVQLVLAPQDDKANQGSN 368 +TD ++ F+A V +VLA KAN GSN Sbjct: 212 TTDAKSSFSFRAEDVPIVLAEHRKKANHGSN 242 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,169,747 Number of Sequences: 219361 Number of extensions: 1851156 Number of successful extensions: 6312 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 5836 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6261 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)