ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7b15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475495.1| Oryza sativa (japonica cultivar-group), predic... 260 5e-66
2dbj|AK065975.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 3e-61
3gb|AY104790.1| Zea mays PCO093811 mRNA sequence 190 4e-45
4gb|BT016764.1| Zea mays clone Contig597 mRNA sequence 182 1e-42
5gb|AY108468.1| Zea mays PCO093809 mRNA sequence 182 1e-42
6gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome... 113 7e-22
7gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome... 113 7e-22
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 113 7e-22
9emb|AJ001304.1|CPHYPOTHE Citrus paradisi mRNA for hypothetical p... 111 3e-21
10ref|NM_113623.2| Arabidopsis thaliana unknown protein AT3G27090 ... 90 1e-14
11gb|AY103299.1| Arabidopsis thaliana AT3g27090/MOJ10_18 mRNA, com... 90 1e-14
12gb|AY058843.1| Arabidopsis thaliana AT3g27090/MOJ10_18 mRNA, com... 90 1e-14
13gb|AY087011.1| Arabidopsis thaliana clone 3049 mRNA, complete se... 90 1e-14
14dbj|AB026649.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 90 1e-14
15gb|BT014019.1| Lycopersicon esculentum clone 133081F, mRNA sequence 88 4e-14
16gb|DQ228317.1| Solanum tuberosum clone 130A10 unknown mRNA 68 4e-08
17gb|BT014232.1| Lycopersicon esculentum clone 133431R, mRNA sequence 68 4e-08
18emb|AJ491856.1|PSA491856 Pisum sativum mRNA for GDA2 protein (gd... 66 2e-07
19emb|X72385.1|DCB2P D.carota mRNA for B2 protein 56 2e-04
20gb|BT014106.1| Lycopersicon esculentum clone 133210F, mRNA sequence 54 6e-04
21emb|AJ875407.1| Glycine max mRNA for N-rich protein (nrp gene) 54 6e-04
22gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
23gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
24dbj|AK106130.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
25dbj|AK060122.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
26gb|AC140935.1| Gallus gallus BAC clone TAM31-90L17 from chromoso... 42 2.3
27gb|AC099704.7| Mus musculus chromosome 15, clone RP23-256A2, com... 40 9.0
28gb|AC132450.3| Mus musculus BAC clone RP23-187N8 from chromosome... 40 9.0
29gb|AC131773.3| Mus musculus BAC clone RP24-308A19 from chromosom... 40 9.0
30gb|AC007030.3| Homo sapiens PAC clone RP5-1112I4 from 7, complet... 40 9.0
31emb|BX901912.10| Zebrafish DNA sequence from clone CH211-212D2 i... 40 9.0
32emb|AL365229.13| Human DNA sequence from clone RP11-723K16 on ch... 40 9.0
33emb|CR626890.8| Zebrafish DNA sequence from clone DKEY-83J7 in l... 40 9.0
34emb|BX324206.6| Zebrafish DNA sequence from clone CH211-66O10 in... 40 9.0
35gb|AF523525.1| Gavia immer clone TUMWGi6.1.8 microsatellite sequ... 40 9.0
36emb|BX324151.11| Zebrafish DNA sequence from clone CH211-62C19 i... 40 9.0
37gb|AC093167.11| Homo sapiens Xp BAC RP11-593P4 (Roswell Park Can... 40 9.0
38gb|AC098825.3| Homo sapiens BAC clone RP11-506A18 from 4, comple... 40 9.0
39emb|BX005188.15| Zebrafish DNA sequence from clone CH211-89H11, ... 40 9.0
40emb|BX247950.12| Zebrafish DNA sequence from clone CH211-51G21, ... 40 9.0
41dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
42gb|AC109822.5| Homo sapiens BAC clone RP11-633J12 from 2, comple... 40 9.0
43gb|AC022966.13| Homo sapiens chromosome 17, clone RP11-323N12, c... 40 9.0
44dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
45emb|BX004779.16| Zebrafish DNA sequence from clone CH211-14K19 i... 40 9.0
46emb|AJ421479.1| Mus musculus X-inactivation center region; segme... 40 9.0
47emb|AL669964.18| Mouse DNA sequence from clone RP23-11P22 on chr... 40 9.0 
>ref|XM_475495.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 945

 Score =  260 bits (131), Expect = 5e-66
 Identities = 223/254 (87%)
 Strand = Plus / Minus

                                                                       
Query: 405 caaaggtctagcagtgacagtgtctctgctatggagagctcaaggcggaatttaggacca 464
           ||||||||||||||||| |  ||||| ||||||||||||||||| || || || ||||||
Sbjct: 926 caaaggtctagcagtgataaggtctcagctatggagagctcaagacgaaactttggacca 867

                                                                       
Query: 465 tcatagtggtgcagcactggcctaaaagcatcctcttccaaggccttgcacagccttcta 524
           || || |||||||||||||| || ||||||||||||||||| | |||||| ||| |||||
Sbjct: 866 tcgtaatggtgcagcactggtctgaaagcatcctcttccaaaggcttgcagagctttcta 807

                                                                       
Query: 525 atgcggattctcacctgtgctgggaatctggattcgcctttgcactttttatcttcccag 584
           |||||||| |||||||| ||||||||||| ||||| ||||| ||||| ||||||||||| 
Sbjct: 806 atgcggatcctcacctgcgctgggaatctagattcacctttacacttcttatcttcccat 747

                                                                       
Query: 585 gcggtgggatcaatgtttgatcctncaaaactagcagcctcaaacaccccatggagttga 644
           || ||||||||||| || |||||| ||||||||| ||||||||| |||||||| || |||
Sbjct: 746 gcagtgggatcaatattagatcctccaaaactagaagcctcaaataccccatgaagctga 687

                         
Query: 645 tgggtcgtgtagtt 658
           ||||||||||||||
Sbjct: 686 tgggtcgtgtagtt 673
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>dbj|AK065975.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045D18, full
            insert sequence
          Length = 1546

 Score =  244 bits (123), Expect = 3e-61
 Identities = 221/254 (87%)
 Strand = Plus / Minus

                                                                        
Query: 405  caaaggtctagcagtgacagtgtctctgctatggagagctcaaggcggaatttaggacca 464
            ||||||||||||||||| |  | ||| ||||||||||||||||| || || || ||||||
Sbjct: 1170 caaaggtctagcagtgataaggcctcagctatggagagctcaagacgaaactttggacca 1111

                                                                        
Query: 465  tcatagtggtgcagcactggcctaaaagcatcctcttccaaggccttgcacagccttcta 524
            || || |||||||||||||| || ||||||||||||||||| | |||||| ||| |||||
Sbjct: 1110 tcgtaatggtgcagcactggtctgaaagcatcctcttccaaaggcttgcagagctttcta 1051

                                                                        
Query: 525  atgcggattctcacctgtgctgggaatctggattcgcctttgcactttttatcttcccag 584
            |||||||| |||||||| ||||||||||| ||||| ||||| ||||  ||||||||||| 
Sbjct: 1050 atgcggatcctcacctgcgctgggaatctagattcacctttacactccttatcttcccat 991

                                                                        
Query: 585  gcggtgggatcaatgtttgatcctncaaaactagcagcctcaaacaccccatggagttga 644
            || ||||||||||| || |||||| ||||||||| ||||||||| |||||||| || |||
Sbjct: 990  gcagtgggatcaatattagatcctccaaaactagaagcctcaaataccccatgaagctga 931

                          
Query: 645  tgggtcgtgtagtt 658
            ||||||||||||||
Sbjct: 930  tgggtcgtgtagtt 917
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>gb|AY104790.1| Zea mays PCO093811 mRNA sequence
          Length = 1604

 Score =  190 bits (96), Expect = 4e-45
 Identities = 212/251 (84%)
 Strand = Plus / Minus

                                                                        
Query: 408  aggtctagcagtgacagtgtctctgctatggagagctcaaggcggaatttaggaccatca 467
            |||||||||||||||| |||||| || |||||||||||||||||||| || || ||||||
Sbjct: 1061 aggtctagcagtgacaatgtctccgcgatggagagctcaaggcggaactttggcccatca 1002

                                                                        
Query: 468  tagtggtgcagcactggcctaaaagcatcctcttccaaggccttgcacagccttctaatg 527
            || |||||||  |||||||| || | |||||||||||| | |||||||||| | ||||||
Sbjct: 1001 taatggtgcaaaactggcctgaaggaatcctcttccaacggcttgcacagcttcctaatg 942

                                                                        
Query: 528  cggattctcacctgtgctgggaatctggattcgcctttgcactttttatcttcccaggcg 587
            | ||| |||||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| || 
Sbjct: 941  cagatcctcacctgcgctgggaatctagattcacctttacacttcttatcctcccatgca 882

                                                                        
Query: 588  gtgggatcaatgtttgatcctncaaaactagcagcctcaaacaccccatggagttgatgg 647
            || ||||| || || || ||  ||||||| ||||||||||| |||||||| || || |||
Sbjct: 881  gtaggatcgatattggacccaccaaaactggcagcctcaaataccccatgaagctggtgg 822

                       
Query: 648  gtcgtgtagtt 658
            || ||||||||
Sbjct: 821  gttgtgtagtt 811
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>gb|BT016764.1| Zea mays clone Contig597 mRNA sequence
          Length = 1573

 Score =  182 bits (92), Expect = 1e-42
 Identities = 211/251 (84%)
 Strand = Plus / Minus

                                                                        
Query: 408  aggtctagcagtgacagtgtctctgctatggagagctcaaggcggaatttaggaccatca 467
            ||||||||||| ||||| ||||| || ||||||||||| ||||| || || || ||||||
Sbjct: 1067 aggtctagcagggacagggtctccgcgatggagagctcgaggcgaaactttgggccatca 1008

                                                                        
Query: 468  tagtggtgcagcactggcctaaaagcatcctcttccaaggccttgcacagccttctaatg 527
            ||||||||||  |||||||| || | |||||||||||| | |||||||||| | |||| |
Sbjct: 1007 tagtggtgcaaaactggcctgaaggaatcctcttccaacggcttgcacagcttcctaacg 948

                                                                        
Query: 528  cggattctcacctgtgctgggaatctggattcgcctttgcactttttatcttcccaggcg 587
            ||||| |||||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| || 
Sbjct: 947  cggatcctcacctgcgctgggaatctagattcacctttacacttcttatcctcccatgca 888

                                                                        
Query: 588  gtgggatcaatgtttgatcctncaaaactagcagcctcaaacaccccatggagttgatgg 647
            ||||||||||| || || ||  ||||||| ||||||||||| |||||||| || || || 
Sbjct: 887  gtgggatcaatattagacccaccaaaactggcagcctcaaataccccatgaagctggtga 828

                       
Query: 648  gtcgtgtagtt 658
            || ||||||||
Sbjct: 827  gtggtgtagtt 817
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>gb|AY108468.1| Zea mays PCO093809 mRNA sequence
          Length = 1259

 Score =  182 bits (92), Expect = 1e-42
 Identities = 211/251 (84%)
 Strand = Plus / Minus

                                                                       
Query: 408 aggtctagcagtgacagtgtctctgctatggagagctcaaggcggaatttaggaccatca 467
           ||||||||||| ||||| ||||| || ||||||||||| ||||| || || || ||||||
Sbjct: 697 aggtctagcagggacagggtctccgcgatggagagctcgaggcgaaactttgggccatca 638

                                                                       
Query: 468 tagtggtgcagcactggcctaaaagcatcctcttccaaggccttgcacagccttctaatg 527
           ||||||||||  |||||||| || | |||||||||||| | |||||||||| | |||| |
Sbjct: 637 tagtggtgcaaaactggcctgaaggaatcctcttccaacggcttgcacagcttcctaacg 578

                                                                       
Query: 528 cggattctcacctgtgctgggaatctggattcgcctttgcactttttatcttcccaggcg 587
           ||||| |||||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| || 
Sbjct: 577 cggatcctcacctgcgctgggaatctagattcacctttacacttcttatcctcccatgca 518

                                                                       
Query: 588 gtgggatcaatgtttgatcctncaaaactagcagcctcaaacaccccatggagttgatgg 647
           ||||||||||| || || ||  ||||||| ||||||||||| |||||||| || || || 
Sbjct: 517 gtgggatcaatattagacccaccaaaactggcagcctcaaataccccatgaagctggtga 458

                      
Query: 648 gtcgtgtagtt 658
           || ||||||||
Sbjct: 457 gtggtgtagtt 447
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>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02,
             complete sequence
          Length = 99795

 Score =  113 bits (57), Expect = 7e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                         
Query: 432   gctatggagagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaa 491
             ||||||||||||||||| || || || |||||||| || |||||||||||||| || |||
Sbjct: 10469 gctatggagagctcaagacgaaactttggaccatcgtaatggtgcagcactggtctgaaa 10528

                                                              
Query: 492   gcatcctcttccaaggccttgcacagccttctaatgcggattctcacct 540
             |||||||||||||| | |||||| ||| ||||||||||||| |||||||
Sbjct: 10529 gcatcctcttccaaaggcttgcagagctttctaatgcggatcctcacct 10577



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                         
Query: 537   acctgtgctgggaatctggattcgcctttgcactttttatcttcccaggcggtgggatca 596
             ||||| ||||||||||| ||||| ||||| ||||| ||||||||||| || |||||||||
Sbjct: 10657 acctgcgctgggaatctagattcacctttacacttcttatcttcccatgcagtgggatca 10716

                                         
Query: 597   atgtttgatcctncaaaactagcagcct 624
             || || |||||| ||||||||| |||||
Sbjct: 10717 atattagatcctccaaaactagaagcct 10744



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 622   cctcaaacaccccatggagttgatgggtcgtgtagtt 658
             ||||||| |||||||| || |||||||||||||||||
Sbjct: 11420 cctcaaataccccatgaagctgatgggtcgtgtagtt 11456
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>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04,
             complete sequence
          Length = 122599

 Score =  113 bits (57), Expect = 7e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                         
Query: 432   gctatggagagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaa 491
             ||||||||||||||||| || || || |||||||| || |||||||||||||| || |||
Sbjct: 93586 gctatggagagctcaagacgaaactttggaccatcgtaatggtgcagcactggtctgaaa 93645

                                                              
Query: 492   gcatcctcttccaaggccttgcacagccttctaatgcggattctcacct 540
             |||||||||||||| | |||||| ||| ||||||||||||| |||||||
Sbjct: 93646 gcatcctcttccaaaggcttgcagagctttctaatgcggatcctcacct 93694



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                         
Query: 537   acctgtgctgggaatctggattcgcctttgcactttttatcttcccaggcggtgggatca 596
             ||||| ||||||||||| ||||| ||||| ||||| ||||||||||| || |||||||||
Sbjct: 93774 acctgcgctgggaatctagattcacctttacacttcttatcttcccatgcagtgggatca 93833

                                         
Query: 597   atgtttgatcctncaaaactagcagcct 624
             || || |||||| ||||||||| |||||
Sbjct: 93834 atattagatcctccaaaactagaagcct 93861



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 622   cctcaaacaccccatggagttgatgggtcgtgtagtt 658
             ||||||| |||||||| || |||||||||||||||||
Sbjct: 94537 cctcaaataccccatgaagctgatgggtcgtgtagtt 94573
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  113 bits (57), Expect = 7e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                            
Query: 432      gctatggagagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaa 491
                ||||||||||||||||| || || || |||||||| || |||||||||||||| || |||
Sbjct: 24407796 gctatggagagctcaagacgaaactttggaccatcgtaatggtgcagcactggtctgaaa 24407855

                                                                 
Query: 492      gcatcctcttccaaggccttgcacagccttctaatgcggattctcacct 540
                |||||||||||||| | |||||| ||| ||||||||||||| |||||||
Sbjct: 24407856 gcatcctcttccaaaggcttgcagagctttctaatgcggatcctcacct 24407904



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                            
Query: 537      acctgtgctgggaatctggattcgcctttgcactttttatcttcccaggcggtgggatca 596
                ||||| ||||||||||| ||||| ||||| ||||| ||||||||||| || |||||||||
Sbjct: 24407984 acctgcgctgggaatctagattcacctttacacttcttatcttcccatgcagtgggatca 24408043

                                            
Query: 597      atgtttgatcctncaaaactagcagcct 624
                || || |||||| ||||||||| |||||
Sbjct: 24408044 atattagatcctccaaaactagaagcct 24408071



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 622      cctcaaacaccccatggagttgatgggtcgtgtagtt 658
                ||||||| |||||||| || |||||||||||||||||
Sbjct: 24408747 cctcaaataccccatgaagctgatgggtcgtgtagtt 24408783



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                            
Query: 440      gagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaagcatcctc 499
                |||||| |||||||| || || || || |||||||||||||| ||||| || || |||||
Sbjct: 29364808 gagctcgaggcggaacttggggccgtcgtagtggtgcagcacgggcctgaaggcgtcctc 29364867

                     
Query: 500      ttcca 504
                 ||||
Sbjct: 29364868 ctcca 29364872
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>emb|AJ001304.1|CPHYPOTHE Citrus paradisi mRNA for hypothetical protein
          Length = 1320

 Score =  111 bits (56), Expect = 3e-21
 Identities = 157/191 (82%)
 Strand = Plus / Minus

                                                                       
Query: 438 gagagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaagcatcc 497
           ||||||||||| || |||||||||||||| ||||| ||||  || |||||||||||||| 
Sbjct: 930 gagagctcaagacgaaatttaggaccatcgtagtgatgcaagacaggcctaaaagcatct 871

                                                                       
Query: 498 tcttccaaggccttgcacagccttctaatgcggattctcacctgtgctgggaatctggat 557
           |||||||| |||||||||||  |||| |  ||||| || ||||| || || || || |||
Sbjct: 870 tcttccaatgccttgcacagttttcttacccggatccttacctgagcaggaaaccttgat 811

                                                                       
Query: 558 tcgcctttgcactttttatcttcccaggcggtgggatcaatgtttgatcctncaaaacta 617
           || ||||| |||||||| || |||||||| || || |||||||| || ||| |||||| |
Sbjct: 810 tcccctttacactttttgtcctcccaggctgttgggtcaatgttggagcctccaaaacca 751

                      
Query: 618 gcagcctcaaa 628
           |  ||||||||
Sbjct: 750 gttgcctcaaa 740
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>ref|NM_113623.2| Arabidopsis thaliana unknown protein AT3G27090 mRNA, complete cds
          Length = 1437

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                       
Query: 438 gagagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaagcatcc 497
           |||||||||||||||||||| ||||||||||||||||| || |||||||| || |  |||
Sbjct: 963 gagagctcaaggcggaattttggaccatcatagtggtgaagtactggcctgaaggagtcc 904

                            
Query: 498 tcttccaaggccttgca 514
           ||||||||||| |||||
Sbjct: 903 tcttccaaggctttgca 887
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>gb|AY103299.1| Arabidopsis thaliana AT3g27090/MOJ10_18 mRNA, complete cds
          Length = 891

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                       
Query: 438 gagagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaagcatcc 497
           |||||||||||||||||||| ||||||||||||||||| || |||||||| || |  |||
Sbjct: 836 gagagctcaaggcggaattttggaccatcatagtggtgaagtactggcctgaaggagtcc 777

                            
Query: 498 tcttccaaggccttgca 514
           ||||||||||| |||||
Sbjct: 776 tcttccaaggctttgca 760
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>gb|AY058843.1| Arabidopsis thaliana AT3g27090/MOJ10_18 mRNA, complete cds
          Length = 1437

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                       
Query: 438 gagagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaagcatcc 497
           |||||||||||||||||||| ||||||||||||||||| || |||||||| || |  |||
Sbjct: 962 gagagctcaaggcggaattttggaccatcatagtggtgaagtactggcctgaaggagtcc 903

                            
Query: 498 tcttccaaggccttgca 514
           ||||||||||| |||||
Sbjct: 902 tcttccaaggctttgca 886
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>gb|AY087011.1| Arabidopsis thaliana clone 3049 mRNA, complete sequence
          Length = 1426

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                       
Query: 438 gagagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaagcatcc 497
           |||||||||||||||||||| ||||||||||||||||| || |||||||| || |  |||
Sbjct: 956 gagagctcaaggcggaattttggaccatcatagtggtgaagtactggcctgaaggagtcc 897

                            
Query: 498 tcttccaaggccttgca 514
           ||||||||||| |||||
Sbjct: 896 tcttccaaggctttgca 880
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>dbj|AB026649.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MOJ10
          Length = 73686

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                         
Query: 438   gagagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaagcatcc 497
             |||||||||||||||||||| ||||||||||||||||| || |||||||| || |  |||
Sbjct: 57861 gagagctcaaggcggaattttggaccatcatagtggtgaagtactggcctgaaggagtcc 57802

                              
Query: 498   tcttccaaggccttgca 514
             ||||||||||| |||||
Sbjct: 57801 tcttccaaggctttgca 57785
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>gb|BT014019.1| Lycopersicon esculentum clone 133081F, mRNA sequence
          Length = 1322

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 145/179 (81%)
 Strand = Plus / Minus

                                                                       
Query: 438 gagagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaagcatcc 497
           ||||||||||| || ||||| || ||||||||||| ||||||||||| ||||||||||| 
Sbjct: 978 gagagctcaagacgaaatttgggtccatcatagtgatgcagcactggtctaaaagcatct 919

                                                                       
Query: 498 tcttccaaggccttgcacagccttctaatgcggattctcacctgtgctgggaatctggat 557
           || ||||| ||| | |  ||  | || || |||||  ||||||| || ||||| || || 
Sbjct: 918 tcctccaaagccctaccaagtttcctgatacggatcttcacctgagcagggaacctcgac 859

                                                                      
Query: 558 tcgcctttgcactttttatcttcccaggcggtgggatcaatgtttgatcctncaaaact 616
           || ||||| ||||| ||||||||||| || || ||||||||||| || ||| |||||||
Sbjct: 858 tctcctttacacttcttatcttcccaagcagttggatcaatgttagaacctccaaaact 800
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>gb|DQ228317.1| Solanum tuberosum clone 130A10 unknown mRNA
          Length = 1288

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                       
Query: 528 cggattctcacctgtgctgggaatctggattcgcctttgcactttttatcttcccaggcg 587
           ||||| |||||||| || ||||| || || || ||||| ||||||||||| |||||||| 
Sbjct: 792 cggatcctcacctgagcagggaaccttgactctcctttacactttttatcctcccaggca 733

                                        
Query: 588 gtgggatcaatgtttgatcctncaaaact 616
           || ||||||||||| || ||| |||||||
Sbjct: 732 gttggatcaatgttggaacctccaaaact 704
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>gb|BT014232.1| Lycopersicon esculentum clone 133431R, mRNA sequence
          Length = 1422

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                       
Query: 528 cggattctcacctgtgctgggaatctggattcgcctttgcactttttatcttcccaggcg 587
           ||||| |||||||| || ||||| || || || ||||| ||||||||||| |||||||| 
Sbjct: 906 cggatcctcacctgagcagggaaccttgactctcctttacactttttatcctcccaggca 847

                                        
Query: 588 gtgggatcaatgtttgatcctncaaaact 616
           || ||||||||||| || ||| |||||||
Sbjct: 846 gttggatcaatgttggaacctccaaaact 818
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>emb|AJ491856.1|PSA491856 Pisum sativum mRNA for GDA2 protein (gda2 gene)
          Length = 1119

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 129/161 (80%)
 Strand = Plus / Minus

                                                                       
Query: 441 agctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaagcatcctct 500
           ||||||||||| || || ||||||||||| || ||||  |||||||| || | ||| |||
Sbjct: 611 agctcaaggcgaaactttggaccatcataatgatgcaaaactggcctgaatgaatcttct 552

                                                                       
Query: 501 tccaaggccttgcacagccttctaatgcggattctcacctgtgctgggaatctggattcg 560
           ||||  |||||||| |   |||| |  || ||||| ||||| |||||||| || || |||
Sbjct: 551 tccagtgccttgcaaatttttctgacacgaattcttacctgagctgggaaccttgactcg 492

                                                    
Query: 561 cctttgcactttttatcttcccaggcggtgggatcaatgtt 601
           |||||||| |||||||| ||||| || || ||||| |||||
Sbjct: 491 cctttgcattttttatcctcccatgcagttggatctatgtt 451
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>emb|X72385.1|DCB2P D.carota mRNA for B2 protein
          Length = 935

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 579 tcccaggcggtgggatcaatgtttgatcctncaaaactagcagcctcaaacaccccatg 637
           ||||| || |||||||||||||||| |||| |||| || ||||||||||| || |||||
Sbjct: 454 tcccaagcagtgggatcaatgtttgttcctccaaagcttgcagcctcaaaaacaccatg 396



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 440 gagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaagcatcctc 499
           |||||| |||||||| ||||||||||| |||||||| || | |||||| || | ||||||
Sbjct: 593 gagctccaggcggaacttaggaccatcgtagtggtggagaattggcctgaatgaatcctc 534

              
Query: 500 ttc 502
           |||
Sbjct: 533 ttc 531
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>gb|BT014106.1| Lycopersicon esculentum clone 133210F, mRNA sequence
          Length = 1420

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 441  agctcaaggcggaatttaggaccatcatagtggtgcagcactggcct 487
            |||||||||||||||||||| ||||| || ||||| || ||||||||
Sbjct: 1166 agctcaaggcggaatttagggccatcgtaatggtgaaggactggcct 1120
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>emb|AJ875407.1| Glycine max mRNA for N-rich protein (nrp gene)
          Length = 1450

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                       
Query: 566 gcactttttatcttcccaggcggtgggatcaatgtttgatcctncaaaactagcagcctc 625
           |||||| || || ||||| || || |||||||| || |||||| ||||||| ||||||||
Sbjct: 961 gcacttcttgtcctcccaagccgttggatcaatattggatcctccaaaacttgcagcctc 902

                             
Query: 626 aaacaccccatggagttg 643
           ||| |  |||||||||||
Sbjct: 901 aaagataccatggagttg 884
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>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0030I14, complete sequence
          Length = 159035

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                         
Query: 440   gagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaagcatcctc 499
             |||||| |||||||| || || || || |||||||||||||| ||||| || || |||||
Sbjct: 12833 gagctcgaggcggaacttggggccgtcgtagtggtgcagcacgggcctgaaggcgtcctc 12892

                  
Query: 500   ttcca 504
              ||||
Sbjct: 12893 ctcca 12897
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>gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560F03,
             complete sequence
          Length = 45160

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 440   gagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaagcatcctc 499
             |||||| |||||||| || || || || |||||||||||||| ||||| || || |||||
Sbjct: 28457 gagctcgaggcggaacttggggccgtcgtagtggtgcagcacgggcctgaaggcgtcctc 28398

                  
Query: 500   ttcca 504
              ||||
Sbjct: 28397 ctcca 28393
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>dbj|AK106130.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F10, full
            insert sequence
          Length = 1306

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 440  gagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaagcatcctc 499
            |||||| |||||||| || || || || |||||||||||||| ||||| || || |||||
Sbjct: 1009 gagctcgaggcggaacttggggccgtcgtagtggtgcagcacgggcctgaaggcgtcctc 950

                 
Query: 500  ttcca 504
             ||||
Sbjct: 949  ctcca 945
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>dbj|AK060122.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G03, full
           insert sequence
          Length = 1187

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 440 gagctcaaggcggaatttaggaccatcatagtggtgcagcactggcctaaaagcatcctc 499
           |||||| |||||||| || || || || |||||||||||||| ||||| || || |||||
Sbjct: 889 gagctcgaggcggaacttggggccgtcgtagtggtgcagcacgggcctgaaggcgtcctc 830

                
Query: 500 ttcca 504
            ||||
Sbjct: 829 ctcca 825
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>gb|AC140935.1| Gallus gallus BAC clone TAM31-90L17 from chromosome ul, complete
             sequence
          Length = 72054

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 347   aagaaccacagagcaaccaca 367
             |||||||||||||||||||||
Sbjct: 11917 aagaaccacagagcaaccaca 11897
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>gb|AC099704.7| Mus musculus chromosome 15, clone RP23-256A2, complete sequence
          Length = 204704

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 501   tccaaggccttgcacagccttcta 524
             |||||||||||||| |||||||||
Sbjct: 17481 tccaaggccttgcaaagccttcta 17458
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>gb|AC132450.3| Mus musculus BAC clone RP23-187N8 from chromosome 18, complete sequence
          Length = 201282

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     agcatgatgatacaaaaacc 32
              ||||||||||||||||||||
Sbjct: 131051 agcatgatgatacaaaaacc 131070
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>gb|AC131773.3| Mus musculus BAC clone RP24-308A19 from chromosome 15, complete sequence
          Length = 168423

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 501    tccaaggccttgcacagccttcta 524
              |||||||||||||| |||||||||
Sbjct: 121901 tccaaggccttgcaaagccttcta 121924
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>gb|AC007030.3| Homo sapiens PAC clone RP5-1112I4 from 7, complete sequence
          Length = 117853

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   caaaggtctagcagtgacag 424
             ||||||||||||||||||||
Sbjct: 32397 caaaggtctagcagtgacag 32378
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>emb|BX901912.10| Zebrafish DNA sequence from clone CH211-212D2 in linkage group 1,
             complete sequence
          Length = 140289

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 291   agaacagaacattgtgaaaacatc 314
             |||||| |||||||||||||||||
Sbjct: 99308 agaacataacattgtgaaaacatc 99331
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>emb|AL365229.13| Human DNA sequence from clone RP11-723K16 on chromosome 20 Contains the
             5' end of the CDH4 gene for retinal cadherin 4 type 1
             (R-cadherin), complete sequence
          Length = 121478

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   ggacagaacagaacattgtg 306
             ||||||||||||||||||||
Sbjct: 41536 ggacagaacagaacattgtg 41555
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>emb|CR626890.8| Zebrafish DNA sequence from clone DKEY-83J7 in linkage group 15,
             complete sequence
          Length = 211127

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    cagcatgatgatacaaaaac 31
             ||||||||||||||||||||
Sbjct: 71515 cagcatgatgatacaaaaac 71534
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>emb|BX324206.6| Zebrafish DNA sequence from clone CH211-66O10 in linkage group 15,
              complete sequence
          Length = 164638

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     cagcatgatgatacaaaaac 31
              ||||||||||||||||||||
Sbjct: 127460 cagcatgatgatacaaaaac 127479
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>gb|AF523525.1| Gavia immer clone TUMWGi6.1.8 microsatellite sequence
          Length = 479

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 agagacaggctcacatctta 205
           ||||||||||||||||||||
Sbjct: 219 agagacaggctcacatctta 238
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>emb|BX324151.11| Zebrafish DNA sequence from clone CH211-62C19 in linkage group 15,
             complete sequence
          Length = 182149

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    cagcatgatgatacaaaaac 31
             ||||||||||||||||||||
Sbjct: 18730 cagcatgatgatacaaaaac 18749
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>gb|AC093167.11| Homo sapiens Xp BAC RP11-593P4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 75001

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   aaatacataaataaggagaa 145
             ||||||||||||||||||||
Sbjct: 15221 aaatacataaataaggagaa 15202
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>gb|AC098825.3| Homo sapiens BAC clone RP11-506A18 from 4, complete sequence
          Length = 175758

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 628   acaccccatggagttgatgggtcg 651
             |||||||||||| |||||||||||
Sbjct: 51842 acaccccatggacttgatgggtcg 51865
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>emb|BX005188.15| Zebrafish DNA sequence from clone CH211-89H11, complete sequence
          Length = 202570

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    ggcaccaacacagagacagg 194
              ||||||||||||||||||||
Sbjct: 123380 ggcaccaacacagagacagg 123361
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>emb|BX247950.12| Zebrafish DNA sequence from clone CH211-51G21, complete sequence
          Length = 172752

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    ggcaccaacacagagacagg 194
              ||||||||||||||||||||
Sbjct: 163530 ggcaccaacacagagacagg 163511
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 372     tgttccgaagcagattaggc 391
               ||||||||||||||||||||
Sbjct: 4376314 tgttccgaagcagattaggc 4376333
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>gb|AC109822.5| Homo sapiens BAC clone RP11-633J12 from 2, complete sequence
          Length = 194235

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     agcatgatgatacaaaaacc 32
              ||||||||||||||||||||
Sbjct: 129695 agcatgatgatacaaaaacc 129714
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>gb|AC022966.13| Homo sapiens chromosome 17, clone RP11-323N12, complete sequence
          Length = 184139

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   acaggctcacatcttagagg 209
             ||||||||||||||||||||
Sbjct: 98897 acaggctcacatcttagagg 98916
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>dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1506_G02
          Length = 106742

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   tgttccgaagcagattaggc 391
             ||||||||||||||||||||
Sbjct: 16163 tgttccgaagcagattaggc 16182
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>emb|BX004779.16| Zebrafish DNA sequence from clone CH211-14K19 in linkage group 1,
             complete sequence
          Length = 196036

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 291   agaacagaacattgtgaaaacatc 314
             |||||| |||||||||||||||||
Sbjct: 44840 agaacataacattgtgaaaacatc 44863
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>emb|AJ421479.1| Mus musculus X-inactivation center region; segment 2/3
          Length = 252150

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     tcatgatgcatcacaacagt 70
              ||||||||||||||||||||
Sbjct: 247239 tcatgatgcatcacaacagt 247220
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>emb|AL669964.18| Mouse DNA sequence from clone RP23-11P22 on chromosome X, complete
             sequence
          Length = 229724

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    tcatgatgcatcacaacagt 70
             ||||||||||||||||||||
Sbjct: 35009 tcatgatgcatcacaacagt 35028


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,772,139
Number of Sequences: 3902068
Number of extensions: 5772139
Number of successful extensions: 111552
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111383
Number of HSP's gapped (non-prelim): 169
length of query: 658
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 635
effective length of database: 17,143,297,704
effective search space: 10885994042040
effective search space used: 10885994042040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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