ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags7b10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469026.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3574 Score = 248 bits (125), Expect = 2e-62 Identities = 170/185 (91%) Strand = Plus / Minus Query: 458 cctgctggctcatgagaatctcaatggcaacattgggatctccgtccgcggcagcaagag 517 ||||||| ||||||||||||||||| |||||||| |||||||| || || |||||||||| Sbjct: 3261 cctgctgactcatgagaatctcaatagcaacatttggatctccatcggcagcagcaagag 3202 Query: 518 caacttcagcctgagtcctttcaaagcccattccaaccagcttcttaagctcttcatcaa 577 |||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3201 caacttcagcttgagtcttttcaaagcccattccaaccagcttcttaagttcttcatcaa 3142 Query: 578 atgtatcagtctggtcagctgttactgttgcatcagctctgacagtgtttgctgctgcat 637 |||||||| ||||||||||| ||| ||||||||||||||||| ||||||||||||| || Sbjct: 3141 atgtatcaacctggtcagctgctacagttgcatcagctctgactgtgtttgctgctggat 3082 Query: 638 gccta 642 ||||| Sbjct: 3081 gccta 3077 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 640 ctagcatgcaaatttgcact 659 |||||||||||||||||||| Sbjct: 1198 ctagcatgcaaatttgcact 1179
>dbj|AK100923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133P16, full insert sequence Length = 3574 Score = 248 bits (125), Expect = 2e-62 Identities = 170/185 (91%) Strand = Plus / Minus Query: 458 cctgctggctcatgagaatctcaatggcaacattgggatctccgtccgcggcagcaagag 517 ||||||| ||||||||||||||||| |||||||| |||||||| || || |||||||||| Sbjct: 3261 cctgctgactcatgagaatctcaatagcaacatttggatctccatcggcagcagcaagag 3202 Query: 518 caacttcagcctgagtcctttcaaagcccattccaaccagcttcttaagctcttcatcaa 577 |||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3201 caacttcagcttgagtcttttcaaagcccattccaaccagcttcttaagttcttcatcaa 3142 Query: 578 atgtatcagtctggtcagctgttactgttgcatcagctctgacagtgtttgctgctgcat 637 |||||||| ||||||||||| ||| ||||||||||||||||| ||||||||||||| || Sbjct: 3141 atgtatcaacctggtcagctgctacagttgcatcagctctgactgtgtttgctgctggat 3082 Query: 638 gccta 642 ||||| Sbjct: 3081 gccta 3077 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 640 ctagcatgcaaatttgcact 659 |||||||||||||||||||| Sbjct: 1198 ctagcatgcaaatttgcact 1179
>ref|XM_469025.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1508 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Minus Query: 458 cctgctggctcatgagaatctcaatggcaacattgggatctccgtccgcggcagcaagag 517 ||||||| ||||||||||||||||| |||||||| |||||||| || || |||||||||| Sbjct: 1195 cctgctgactcatgagaatctcaatagcaacatttggatctccatcggcagcagcaagag 1136 Query: 518 caacttcagcctgagtcctttcaaagcccattccaaccagcttcttaagctcttcatcaa 577 |||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1135 caacttcagcttgagtcttttcaaagcccattccaaccagcttcttaagttcttcatcaa 1076 Query: 578 atgtatcagtctggtcagctgttactgttgcatcagctctgacagtgtttgctgctgcat 637 |||||||| ||||||||||| ||| ||||||||||||||||| ||||||||||||| || Sbjct: 1075 atgtatcaacctggtcagctgctacagttgcatcagctctgactgtgtttgctgctggat 1016 Query: 638 gc 639 || Sbjct: 1015 gc 1014 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 640 ctagcatgcaaatttgcact 659 |||||||||||||||||||| Sbjct: 968 ctagcatgcaaatttgcact 949
>gb|AY106578.1| Zea mays PCO089119 mRNA sequence Length = 777 Score = 224 bits (113), Expect = 3e-55 Identities = 155/169 (91%) Strand = Plus / Minus Query: 458 cctgctggctcatgagaatctcaatggcaacattgggatctccgtccgcggcagcaagag 517 ||||||| ||||| |||||||||||||||||||| ||||| || || || |||||||||| Sbjct: 387 cctgctgactcatcagaatctcaatggcaacatttggatccccatcagctgcagcaagag 328 Query: 518 caacttcagcctgagtcctttcaaagcccattccaaccagcttcttaagctcttcatcaa 577 ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 327 caacttcagcctgagtcttttcaaagcccattccaaccagcttcttaagttcttcatcaa 268 Query: 578 atgtatcagtctggtcagctgttactgttgcatcagctctgacagtgtt 626 |||||||| ||| |||||||| |||||||||||||||||||| ||||| Sbjct: 267 atgtatcaacctgctcagctgtcactgttgcatcagctctgactgtgtt 219
>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 458 cctgctggctcatgagaatctcaatggcaacattgggatctccgtccgcggcagcaagag 517 ||||||| ||||||||||||||||| |||||||| |||||||| || || |||||||||| Sbjct: 109896 cctgctgactcatgagaatctcaatagcaacatttggatctccatcggcagcagcaagag 109955 Query: 518 caacttcagcctgagtc 534 |||||||||| |||||| Sbjct: 109956 caacttcagcttgagtc 109972 Score = 91.7 bits (46), Expect = 3e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 536 tttcaaagcccattccaaccagcttcttaagctcttcatcaaatgtatca 585 ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 110415 tttcaaagcccattccaaccagcttcttaagttcttcatcaaatgtatca 110464 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 588 ctggtcagctgttactgttgcatcagctctgacagtgtttgctgctgcatgccta 642 ||||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||| Sbjct: 110548 ctggtcagctgctacagttgcatcagctctgactgtgtttgctgctggatgccta 110602 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 640 ctagcatgcaaatttgcact 659 |||||||||||||||||||| Sbjct: 112481 ctagcatgcaaatttgcact 112500
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 458 cctgctggctcatgagaatctcaatggcaacattgggatctccgtccgcggcagcaagag 517 ||||||| ||||||||||||||||| |||||||| |||||||| || || |||||||||| Sbjct: 24993451 cctgctgactcatgagaatctcaatagcaacatttggatctccatcggcagcagcaagag 24993510 Query: 518 caacttcagcctgagtc 534 |||||||||| |||||| Sbjct: 24993511 caacttcagcttgagtc 24993527 Score = 91.7 bits (46), Expect = 3e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 536 tttcaaagcccattccaaccagcttcttaagctcttcatcaaatgtatca 585 ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 24993970 tttcaaagcccattccaaccagcttcttaagttcttcatcaaatgtatca 24994019 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 588 ctggtcagctgttactgttgcatcagctctgacagtgtttgctgctgcatgccta 642 ||||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||| Sbjct: 24994103 ctggtcagctgctacagttgcatcagctctgactgtgtttgctgctggatgccta 24994157 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 640 ctagcatgcaaatttgcact 659 |||||||||||||||||||| Sbjct: 24996036 ctagcatgcaaatttgcact 24996055 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 120 cttatatttaaaaatggaaggagtactt 147 ||||||||| ||||||||||||||||| Sbjct: 22486481 cttatattttgaaatggaaggagtactt 22486508
>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete sequence Length = 170020 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 458 cctgctggctcatgagaatctcaatggcaacattgggatctccgtccgcggcagcaagag 517 ||||||| ||||||||||||||||| |||||||| |||||||| || || |||||||||| Sbjct: 25258 cctgctgactcatgagaatctcaatagcaacatttggatctccatcggcagcagcaagag 25317 Query: 518 caacttcagcctgagtc 534 |||||||||| |||||| Sbjct: 25318 caacttcagcttgagtc 25334 Score = 91.7 bits (46), Expect = 3e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 536 tttcaaagcccattccaaccagcttcttaagctcttcatcaaatgtatca 585 ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 25777 tttcaaagcccattccaaccagcttcttaagttcttcatcaaatgtatca 25826 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 588 ctggtcagctgttactgttgcatcagctctgacagtgtttgctgctgcatgccta 642 ||||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||| Sbjct: 25910 ctggtcagctgctacagttgcatcagctctgactgtgtttgctgctggatgccta 25964 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 640 ctagcatgcaaatttgcact 659 |||||||||||||||||||| Sbjct: 27843 ctagcatgcaaatttgcact 27862
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 458 cctgctggctcatgagaatctcaatggcaacattgggatctccgtccgcggcagcaagag 517 ||||||| ||||||||||||||||| |||||||| |||||||| || || |||||||||| Sbjct: 25084768 cctgctgactcatgagaatctcaatagcaacatttggatctccatcggcagcagcaagag 25084827 Query: 518 caacttcagcctgagtc 534 |||||||||| |||||| Sbjct: 25084828 caacttcagcttgagtc 25084844 Score = 91.7 bits (46), Expect = 3e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 536 tttcaaagcccattccaaccagcttcttaagctcttcatcaaatgtatca 585 ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 25085287 tttcaaagcccattccaaccagcttcttaagttcttcatcaaatgtatca 25085336 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 588 ctggtcagctgttactgttgcatcagctctgacagtgtttgctgctgcatgccta 642 ||||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||| Sbjct: 25085420 ctggtcagctgctacagttgcatcagctctgactgtgtttgctgctggatgccta 25085474 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 640 ctagcatgcaaatttgcact 659 |||||||||||||||||||| Sbjct: 25087353 ctagcatgcaaatttgcact 25087372 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 120 cttatatttaaaaatggaaggagtactt 147 ||||||||| ||||||||||||||||| Sbjct: 22479510 cttatattttgaaatggaaggagtactt 22479537
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 83.8 bits (42), Expect = 7e-13 Identities = 102/119 (85%), Gaps = 5/119 (4%) Strand = Plus / Minus Query: 16 ttttagagattcna-tatgaaccacatacggagcaaaatgagtgaatct--actctaaaa 72 |||||||||||| | |||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 1349 ttttagagattctaatatggactacatacggagcaaaatgagtgaatctacactctaaaa 1290 Query: 73 tacatctata--catccgtatttggtctataccgaaatatctaaaaaggcttatattta 129 ||| |||||| ||||||||| | ||| ||| |||| ||||||||| |||||||||| Sbjct: 1289 tacgtctatattcatccgtatgtagtccatattcaaatctctaaaaagacttatattta 1231
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 83.8 bits (42), Expect = 7e-13 Identities = 102/120 (85%), Gaps = 4/120 (3%) Strand = Plus / Minus Query: 30 tatgaaccacatacggagcaaaatgagtgaatcta--ctctaaaatacatcta--tacat 85 |||| ||||||||||||| |||||||||||| ||| ||||||||| |||||| ||||| Sbjct: 2903 tatggaccacatacggagtaaaatgagtgaacctatactctaaaatgcatctacatacat 2844 Query: 86 ccgtatttggtctataccgaaatatctaaaaaggcttatatttaaaaatggaaggagtac 145 |||||| ||||| ||| ||||| |||| |||| |||||||||| |||||| ||||||| Sbjct: 2843 ccgtatgtggtccatagtgaaatctctacaaagacttatatttaggaatggagggagtac 2784
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 75.8 bits (38), Expect = 2e-10 Identities = 101/119 (84%), Gaps = 5/119 (4%) Strand = Plus / Minus Query: 16 ttttagagattcna-tatgaaccacatacggagcaaaatgagtgaatct--actctaaaa 72 |||||||||||| | |||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 1355 ttttagagattctaatatggactacatacggagcaaaatgagtgaatctacactctaaaa 1296 Query: 73 tacatctata--catccgtatttggtctataccgaaatatctaaaaaggcttatattta 129 ||| |||||| ||||||||| | || ||| |||| ||||||||| |||||||||| Sbjct: 1295 tacgtctatattcatccgtatgtagtgcatattcaaatctctaaaaagacttatattta 1237
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 71.9 bits (36), Expect = 3e-09 Identities = 100/119 (84%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 29 atatgaaccacatacggagcaaaatgagtgaatct--actctaaaatacatctatacatc 86 ||||| || |||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 56820 atatggactacatacggagcaaaatgagtgaatctacactctaaaatacgactatacatc 56879 Query: 87 cgtatttggtctataccgaaatatctaaaaaggc-ttatatttaaaaatggaaggagta 144 |||| | ||| || ||||| |||||| |||| ||||||||| ||| ||| |||||| Sbjct: 56880 tgtatgtagtccgtattgaaatctctaaacaggctttatatttagaaacggagggagta 56938
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 61.9 bits (31), Expect = 2e-06 Identities = 83/98 (84%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 35 accacatacggagcaaaatgagtgaatctactc-taaaatacatc--tatacatccgtat 91 |||||||| ||||||||||||||||||||| | |||||| |||| ||||||||||||| Sbjct: 23160 accacataaggagcaaaatgagtgaatctatacttaaaatgcatctatatacatccgtat 23219 Query: 92 ttggtctataccgaaatatctaaaaaggcttatattta 129 |||| ||| ||||| |||| |||| |||||||||| Sbjct: 23220 gtggttcatagtgaaatctctacaaagacttatattta 23257
>gb|AF536819.1| Triticum aestivum ADP glucose pyrophosphorylase gene, partial cds, alternatively spliced Length = 2512 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/61 (90%), Gaps = 4/61 (6%) Strand = Plus / Plus Query: 40 atacggagcaaaatgagtgaatct--actctaaaatacatc--tatacatccgtatttgg 95 |||||||||||||||||||||||| |||||||||||| || ||||||||||||| ||| Sbjct: 437 atacggagcaaaatgagtgaatctacactctaaaatacgtctatatacatccgtatatgg 496 Query: 96 t 96 | Sbjct: 497 t 497
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 29 atatgaaccacatacggagcaaaatgagtgaatctac 65 |||||||| ||||||||| |||||||||||||||||| Sbjct: 172961 atatgaactacatacggaacaaaatgagtgaatctac 172997
>gb|DQ013359.1| Triticum aestivum wall-associated kinase 3 (WAK3) gene, complete cds Length = 5331 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 16 ttttagagattcna-tatgaaccacatacggagcaaaatgagtgaatc 62 |||||||||||| | || |||| ||||||||||||||||||||||||| Sbjct: 369 ttttagagattctaatacgaactacatacggagcaaaatgagtgaatc 322
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||||||||||||||||||||||||| Sbjct: 12721 acatacggagcaaaatgagtgaatctac 12748
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||||||||||||||||||||||||| Sbjct: 70065 acatacggagcaaaatgagtgaatctac 70038
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||||||||||||||||||||||||| Sbjct: 50024 acatacggagcaaaatgagtgaatctac 49997
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||||||||||||||||||||||||| Sbjct: 10497 acatacggagcaaaatgagtgaatctac 10470
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/39 (94%), Gaps = 2/39 (5%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatc--tactctaaaata 74 ||||||||||||||||||||||||| |||||||||||| Sbjct: 1644 acatacggagcaaaatgagtgaatctatactctaaaata 1682 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||||||||||||||||||||||||| Sbjct: 199 acatacggagcaaaatgagtgaatctac 226 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/39 (92%), Gaps = 2/39 (5%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatc--tactctaaaata 74 ||||||| ||||||||||||||||| |||||||||||| Sbjct: 217239 acatacgaagcaaaatgagtgaatctatactctaaaata 217277 Score = 40.1 bits (20), Expect = 9.1 Identities = 41/47 (87%), Gaps = 2/47 (4%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatcta--ctctaaaatacatctata 82 ||||||||||||||| |||| |||||| ||||||| ||| |||||| Sbjct: 143229 acatacggagcaaaacgagtaaatctatgctctaaagtacgtctata 143275
>gb|DQ247831.1| Aegilops sharonensis voucher H6680 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||||||||||||||||||||||||| Sbjct: 970 acatacggagcaaaatgagtgaatctac 997
>gb|DQ247830.1| Aegilops longissima voucher H6679 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||||||||||||||||||||||||| Sbjct: 970 acatacggagcaaaatgagtgaatctac 997
>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds Length = 11475 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/47 (91%), Gaps = 2/47 (4%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatct--actctaaaatacatctata 82 ||||||| |||||||||||||||||| |||||||||| |||||||| Sbjct: 8672 acatacgaagcaaaatgagtgaatctacactctaaaatgcatctata 8626
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||||||||||||||||||||||||| Sbjct: 7815 acatacggagcaaaatgagtgaatctac 7788
>emb|X81368.1|TAAWJL175 T.aestivumn (subclone pAWJL175) AWJL175 gene Length = 2374 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||||||||||||||||||||||||| Sbjct: 2352 acatacggagcaaaatgagtgaatctac 2325
>gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 phytochelatin synthetase-like protein (PCS-a) pseudogene, complete sequence Length = 5106 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/39 (94%), Gaps = 2/39 (5%) Strand = Plus / Minus Query: 46 agcaaaatgagtgaatct--actctaaaatacatctata 82 |||||||||||||||||| ||||||||||||||||||| Sbjct: 2283 agcaaaatgagtgaatctacactctaaaatacatctata 2245
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatcta 64 ||||||||||||||||||||||||||| Sbjct: 76923 acatacggagcaaaatgagtgaatcta 76897 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||||||||||||||| ||||||||| Sbjct: 29945 acatacggagcaaaatgattgaatctac 29918
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatcta 64 ||||||||||||||||||||||||||| Sbjct: 24762 acatacggagcaaaatgagtgaatcta 24788
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 40 atacggagcaaaatgagtgaatctac 65 |||||||||||||||||||||||||| Sbjct: 61117 atacggagcaaaatgagtgaatctac 61092
>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds Length = 11462 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/53 (88%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 19 tagagattcna-tatgaaccacatacggagcaaaatgagtgaatctactctaa 70 ||||||||| | |||| |||| ||||||||||||||||||||| |||| |||| Sbjct: 3533 tagagattccactatggaccatatacggagcaaaatgagtgaacctacactaa 3585
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 119 gcttatatttaaaaatggaaggagtactt 147 |||||||||| |||||||||||||||||| Sbjct: 3404 gcttatatttcaaaatggaaggagtactt 3432
>gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete sequence Length = 120527 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 119 gcttatatttaaaaatggaaggagtactt 147 ||||||||||||||||||| ||||||||| Sbjct: 42254 gcttatatttaaaaatggagggagtactt 42282
>gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete sequence Length = 107448 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 120 cttatatttaaaaatggaaggagta 144 ||||||||||||||||||||||||| Sbjct: 33809 cttatatttaaaaatggaaggagta 33785
>gb|AC146588.14| Medicago truncatula clone mth2-145c3, complete sequence Length = 116965 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 120 cttatatttaaaaatggaaggagta 144 ||||||||||||||||||||||||| Sbjct: 33047 cttatatttaaaaatggaaggagta 33023
>gb|AC144931.29| Medicago truncatula clone mth2-22b18, complete sequence Length = 122819 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 120 cttatatttaaaaatggaaggagta 144 ||||||||||||||||||||||||| Sbjct: 5342 cttatatttaaaaatggaaggagta 5318
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 119 gcttatatttaaaaatggaaggagtactt 147 |||||||||| |||||||||||||||||| Sbjct: 2244 gcttatatttcaaaatggaaggagtactt 2272
>gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete sequence Length = 99712 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 120 cttatatttaaaaatggaaggagta 144 ||||||||||||||||||||||||| Sbjct: 23326 cttatatttaaaaatggaaggagta 23302
>gb|AC142094.12| Medicago truncatula clone mth2-34h6, complete sequence Length = 151594 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 120 cttatatttaaaaatggaaggagta 144 ||||||||||||||||||||||||| Sbjct: 146252 cttatatttaaaaatggaaggagta 146276
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/67 (86%), Gaps = 4/67 (5%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatct--actctaaaatacatc--tatacatccgtattt 93 ||||||||| |||||||||||||||| ||||||||||| || ||||||||||||| | Sbjct: 8476 acatacggaccaaaatgagtgaatctacactctaaaatatgtctatatacatccgtatgt 8417 Query: 94 ggtctat 100 |||||| Sbjct: 8416 agtctat 8410 Score = 40.1 bits (20), Expect = 9.1 Identities = 77/94 (81%), Gaps = 4/94 (4%) Strand = Plus / Plus Query: 40 atacggagcaaaatgagtgaatcta--ctctaaaatacatctat--acatccgtatttgg 95 ||||||| |||||||| |||||||| || ||||||| ||||| |||||||||| | | Sbjct: 238 atacggaacaaaatgaatgaatctatactttaaaatatgtctatgtacatccgtatgtag 297 Query: 96 tctataccgaaatatctaaaaaggcttatattta 129 | |||| | ||| ||||||||| |||||||||| Sbjct: 298 tttatagtgcaatctctaaaaagtcttatattta 331
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 40 atacggagcaaaatgagtgaatcta 64 ||||||||||||||||||||||||| Sbjct: 1140 atacggagcaaaatgagtgaatcta 1116 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaat 61 ||||||||| |||||||||||||| Sbjct: 1329 acatacggaacaaaatgagtgaat 1306
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 119 gcttatatttaaaaatggaaggagtactt 147 |||||||||| |||||||||||||||||| Sbjct: 5316730 gcttatatttcaaaatggaaggagtactt 5316758
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 120 cttatatttaaaaatggaaggagtacttt 148 ||||||||||| ||||||||||||||||| Sbjct: 29946944 cttatatttaagaatggaaggagtacttt 29946972 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 atatttaaaaatggaaggagta 144 |||||||||||||||||||||| Sbjct: 9514793 atatttaaaaatggaaggagta 9514814 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 121 ttatatttaaaaatggaaggagtac 145 |||||||| |||||||||||||||| Sbjct: 28412697 ttatattttaaaatggaaggagtac 28412721 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 ttatatttaaaaatggaaggagta 144 |||||||| ||||||||||||||| Sbjct: 4230058 ttatattttaaaatggaaggagta 4230081
>dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0480C01 Length = 151100 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 120 cttatatttaaaaatggaaggagtacttt 148 ||||||||||| ||||||||||||||||| Sbjct: 91502 cttatatttaagaatggaaggagtacttt 91530
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 112 taaaaaggcttatatttaaaaatggaaggagta 144 ||||||| ||||||||||||||| ||||||||| Sbjct: 18780 taaaaagacttatatttaaaaatagaaggagta 18812 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatctac 65 ||||||| |||||||||||| ||||||| Sbjct: 85346 acatacgaagcaaaatgagtaaatctac 85319
>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12, complete sequence Length = 88725 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 119 gcttatatttaaaaatggaaggagtactt 147 |||||||||| |||||||||||||||||| Sbjct: 53431 gcttatatttcaaaatggaaggagtactt 53459
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||| ||||||||||||||||||||| Sbjct: 93781 acatacagagcaaaatgagtgaatctac 93808 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 36 ccacatacggagcaaaatgagtgaatcta 64 |||||||||||| ||||||| |||||||| Sbjct: 55608 ccacatacggagtaaaatgaatgaatcta 55636
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||| ||||||||||||||||||||| Sbjct: 23326 acatacagagcaaaatgagtgaatctac 23353
>gb|AF343493.1| Secale cereale clone pla 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1535 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatctac 65 ||||||||||||||||||||| |||||| Sbjct: 1265 acatacggagcaaaatgagtgtatctac 1292
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaat 61 |||||||||||||||||||||||| Sbjct: 66716 acatacggagcaaaatgagtgaat 66693 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 39 catacggagcaaaatgagtgaatctac 65 ||||||||| ||||||||||||||||| Sbjct: 83575 catacggagtaaaatgagtgaatctac 83549 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatcta 64 |||||||||||||||||| |||||||| Sbjct: 14601 acatacggagcaaaatgattgaatcta 14575
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatctac 65 ||||||| |||||||||||||||||||| Sbjct: 50579 acatacgaagcaaaatgagtgaatctac 50552
>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041) gene, complete cds Length = 8735 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/39 (92%), Gaps = 2/39 (5%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatc--tactctaaaata 74 ||||||||||||||||||| ||||| |||||||||||| Sbjct: 5692 acatacggagcaaaatgagcgaatctatactctaaaata 5730
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/39 (92%), Gaps = 2/39 (5%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatc--tactctaaaata 74 ||||||| ||||||||||||||||| |||||||||||| Sbjct: 5476 acatacgaagcaaaatgagtgaatctatactctaaaata 5438
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||||||||||||||||| ||||||| Sbjct: 441 acatacggagcaaaatgagttaatctac 468
>gb|AF189727.1|AF189727 Hordeum vulgare NRT2.3 gene, promoter sequence Length = 1557 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||| ||||||||||||||||||||| Sbjct: 534 acatacagagcaaaatgagtgaatctac 507
>gb|DQ324801.1| Hordeum vulgare subsp. vulgare germin B (GerB) gene, promoter and partial cds Length = 1326 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||||||||||||||||| ||||||| Sbjct: 140 acatacggagcaaaatgagttaatctac 167
>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds Length = 3686 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||| ||||||||||||||||||||| Sbjct: 2128 acatacagagcaaaatgagtgaatctac 2101
>emb|X68288.1|TAECPRO T.aestivum gene for EC protein Length = 3065 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 38 acatacggagcaaaatgagtgaatcta 64 |||||||||||||||||| |||||||| Sbjct: 1809 acatacggagcaaaatgaatgaatcta 1783
>emb|CR932965.2| Medicago truncatula chromosome 5 clone mth2-47e6, COMPLETE SEQUENCE Length = 96647 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 119 gcttatatttaaaaatggaaggagtac 145 ||||||||||||||| ||||||||||| Sbjct: 64299 gcttatatttaaaaacggaaggagtac 64273
>emb|CR932958.2| Medicago truncatula chromosome 5 clone mth2-174i23, COMPLETE SEQUENCE Length = 122746 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 119 gcttatatttaaaaatggaaggagtac 145 ||||||||||||||||||| ||||||| Sbjct: 48920 gcttatatttaaaaatggagggagtac 48946 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 120 cttatatttaaaaatggaaggagtactttcaa 151 |||||||||||||||| | ||||||| ||||| Sbjct: 39555 cttatatttaaaaatgaagggagtaccttcaa 39586
>gb|DQ220740.1| Aegilops sharonensis genomic sequence Length = 3804 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 40 atacggagcaaaatgagtgaatc 62 ||||||||||||||||||||||| Sbjct: 2736 atacggagcaaaatgagtgaatc 2714
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 40 atacggagcaaaatgagtgaatctactctaa 70 ||||||||||||||||||||| |||| |||| Sbjct: 3615 atacggagcaaaatgagtgaacctacactaa 3645
>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds Length = 5163 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatcta 64 ||||||||| ||||||||||||||||| Sbjct: 3894 acatacggaacaaaatgagtgaatcta 3920
>gb|AC149473.33| Medicago truncatula clone mth2-119h6, complete sequence Length = 128535 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 gcttatatttaaaaatggaaggagta 144 ||||||||||||||||||| |||||| Sbjct: 8456 gcttatatttaaaaatggagggagta 8481
>gb|AC152158.10| Medicago truncatula clone mth2-139g10, complete sequence Length = 140874 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 gcttatatttaaaaatggaaggagta 144 ||||||||||||||||||| |||||| Sbjct: 42826 gcttatatttaaaaatggagggagta 42801
>emb|CR931736.1| Medicago truncatula chromosome 5 clone mte1-84f20, COMPLETE SEQUENCE Length = 149149 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 gcttatatttaaaaatggaaggagta 144 ||||||||||||||| |||||||||| Sbjct: 56016 gcttatatttaaaaacggaaggagta 56041
>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1 gene, complete cds Length = 4098 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 11 agacattttagagattcna-tatgaaccacatacgga 46 ||||||||||||||||| | ||||||| ||||||||| Sbjct: 840 agacattttagagattccactatgaactacatacgga 804 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 41 tacggagcaaaatgagtgaatctac 65 |||| |||||||||||||||||||| Sbjct: 757 tacgaagcaaaatgagtgaatctac 781
>gb|AC147482.2| Medicago truncatula chromosome 7 BAC clone mth2-93e11, complete sequence Length = 119127 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 gcttatatttaaaaatggaaggagta 144 ||||||||||||||||||| |||||| Sbjct: 28560 gcttatatttaaaaatggagggagta 28585
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds Length = 6228 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 catacggagcaaaatgagtgaatcta 64 ||||||||||||||||| |||||||| Sbjct: 5343 catacggagcaaaatgaatgaatcta 5318 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatctactc 67 ||||| |||||||||||| ||||||||||| Sbjct: 5208 acatagggagcaaaatgattgaatctactc 5237
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0424A08 Length = 151294 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 atatttaaaaatggaaggagta 144 |||||||||||||||||||||| Sbjct: 48222 atatttaaaaatggaaggagta 48243
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 16 ttttagagattcna-tatgaaccacatacggagcaaa 51 |||||||||||| | ||||||| |||||||||||||| Sbjct: 17196 ttttagagattccaatatgaactacatacggagcaaa 17232
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 42.1 bits (21), Expect = 2.3 Identities = 57/68 (83%), Gaps = 2/68 (2%) Strand = Plus / Minus Query: 64 actctaaaatacatc--tatacatccgtatttggtctataccgaaatatctaaaaaggct 121 |||||||||||| || |||| |||||||| | ||||||| ||||||||||||| || Sbjct: 336146 actctaaaatacgtccatatatatccgtatgtagtctatattaaaatatctaaaaatact 336087 Query: 122 tatattta 129 |||||||| Sbjct: 336086 tatattta 336079
>emb|CR545470.5| Zebrafish DNA sequence from clone CH211-175E15 in linkage group 15, complete sequence Length = 38647 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 643 gcatgcaaatttgcactggcc 663 ||||||||||||||||||||| Sbjct: 15628 gcatgcaaatttgcactggcc 15608
>gb|AC146748.16| Medicago truncatula clone mth2-65k8, complete sequence Length = 113744 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 120 cttatatttaaaaatggaaggagta 144 |||||||||||||| |||||||||| Sbjct: 104058 cttatatttaaaaacggaaggagta 104034
>gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete sequence Length = 130178 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 119 gcttatatttaaaaatggaaggagtactt 147 ||||||||||||||| ||| ||||||||| Sbjct: 115976 gcttatatttaaaaacggagggagtactt 115948
>gb|AC127021.25| Medicago truncatula clone mth2-5e5, complete sequence Length = 139116 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 cttatatttaaaaatggaaggagta 144 |||||||||||||||||| |||||| Sbjct: 104313 cttatatttaaaaatggagggagta 104337
>emb|CR932962.2| Medicago truncatula chromosome 5 clone mte1-70c24, COMPLETE SEQUENCE Length = 128704 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 120 cttatatttaaaaatggaaggagta 144 |||||||||||||| |||||||||| Sbjct: 115493 cttatatttaaaaacggaaggagta 115469
>emb|CR931740.2| Medicago truncatula chromosome 5 clone mth2-67g10, COMPLETE SEQUENCE Length = 153273 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 gcttatatttaaaaatggaaggagtactt 147 ||||||||||||||| ||| ||||||||| Sbjct: 100112 gcttatatttaaaaacggagggagtactt 100140
>emb|CR388161.7| Zebrafish DNA sequence from clone CH211-288B17 in linkage group 18, complete sequence Length = 80508 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 517 gcaacttcagcctgagtcctttcaaagcccatt 549 |||| ||||||||||||| ||| |||||||||| Sbjct: 8908 gcaatttcagcctgagtcatttaaaagcccatt 8876
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 109 atctaaaaaggcttatatttaaaaa 133 ||||||||| ||||||||||||||| Sbjct: 860326 atctaaaaatgcttatatttaaaaa 860302 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ccatgttcagtactagtact 235 |||||||||||||||||||| Sbjct: 2292114 ccatgttcagtactagtact 2292133
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 cttatatttaaaaatggaaggagta 144 |||||||||||||||||| |||||| Sbjct: 21357179 cttatatttaaaaatggagggagta 21357203 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 ctaaaaaggcttatatttaaaaat 134 ||||||| |||||||||||||||| Sbjct: 18901310 ctaaaaatgcttatatttaaaaat 18901287 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cagtactagtactacataag 242 |||||||||||||||||||| Sbjct: 12870128 cagtactagtactacataag 12870147
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 tatatttaaaaatggaaggagtact 146 |||||||||||||||||| |||||| Sbjct: 29515925 tatatttaaaaatggaagaagtact 29515949
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 cttatatttaaaaatggaaggagta 144 |||||||||||||||| |||||||| Sbjct: 6549775 cttatatttaaaaatgaaaggagta 6549799
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0519D04 Length = 193068 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 121 ttatatttaaaaatggaaggagtac 145 |||||||| |||||||||||||||| Sbjct: 127797 ttatattttaaaatggaaggagtac 127821
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 tatatttaaaaatggaaggagtact 146 |||||||||||||||||| |||||| Sbjct: 80431 tatatttaaaaatggaagaagtact 80455
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 109 atctaaaaaggcttatatttaaaaa 133 ||||||||| ||||||||||||||| Sbjct: 23064 atctaaaaatgcttatatttaaaaa 23040
>dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1729_E01 Length = 155527 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 cttatatttaaaaatggaaggagta 144 |||||||||||||||||| |||||| Sbjct: 1235 cttatatttaaaaatggagggagta 1259
>dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1008_E09 Length = 101964 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 cttatatttaaaaatggaaggagta 144 |||||||||||||||||| |||||| Sbjct: 77347 cttatatttaaaaatggagggagta 77371
>emb|AL954187.5| Zebrafish DNA sequence from clone CH211-69P5 in linkage group 15, complete sequence Length = 185137 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 643 gcatgcaaatttgcactggcc 663 ||||||||||||||||||||| Sbjct: 14012 gcatgcaaatttgcactggcc 13992
>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1307A11 Length = 131538 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 cttatatttaaaaatggaaggagta 144 |||||||||||||||| |||||||| Sbjct: 110388 cttatatttaaaaatgaaaggagta 110412
>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0427G12 Length = 185545 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 109 atctaaaaaggcttatatttaaaaa 133 ||||||||| ||||||||||||||| Sbjct: 159546 atctaaaaatgcttatatttaaaaa 159522
>ref|NM_114585.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G47180 mRNA, complete cds Length = 654 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 ggcagcaagagcaacttcag 526 |||||||||||||||||||| Sbjct: 96 ggcagcaagagcaacttcag 77
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 attggacaaatgcaagcaggcact 266 ||||||||||| |||||||||||| Sbjct: 809040 attggacaaattcaagcaggcact 809063
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||| ||||||||||||| ||||||| Sbjct: 198501 acatacagagcaaaatgagtaaatctac 198528 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatctac 65 |||||| ||||||||||||| ||||||| Sbjct: 44747 acatacagagcaaaatgagtaaatctac 44774
>gb|AC145323.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018N12, complete sequence Length = 137127 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 ttatatttaaaaatggaaggagta 144 ||||||||||||||||| |||||| Sbjct: 112016 ttatatttaaaaatggagggagta 112039
>gb|AC149290.1| Solanum demissum chromosome 5 clone PGEC093P17 map MAP_LOC, complete sequence Length = 200238 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 ctactctaaaatacatctatacat 85 ||||||||||||||||||| |||| Sbjct: 139344 ctactctaaaatacatctaaacat 139321
>gb|AC163676.4| Mus musculus BAC clone RP24-81A22 from chromosome 3, complete sequence Length = 223760 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aaaggcttatatttaaaaat 134 |||||||||||||||||||| Sbjct: 137936 aaaggcttatatttaaaaat 137917
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 120 cttatatttaaaaatggaaggagtactt 147 ||||||||| ||||||||||||||||| Sbjct: 81728 cttatattttgaaatggaaggagtactt 81755
>gb|AC131593.16| Mus musculus chromosome 3, clone RP24-566M9, complete sequence Length = 143352 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aaaggcttatatttaaaaat 134 |||||||||||||||||||| Sbjct: 32578 aaaggcttatatttaaaaat 32559
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaat 61 ||||||| |||||||||||||||| Sbjct: 71743 acatacgaagcaaaatgagtgaat 71766
>gb|BT012388.1| Arabidopsis thaliana At3g47180 mRNA, complete cds Length = 633 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 ggcagcaagagcaacttcag 526 |||||||||||||||||||| Sbjct: 96 ggcagcaagagcaacttcag 77
>gb|BT011767.1| Arabidopsis thaliana At3g47180 mRNA, complete cds Length = 748 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 ggcagcaagagcaacttcag 526 |||||||||||||||||||| Sbjct: 190 ggcagcaagagcaacttcag 171
>gb|AC118639.12| Mus musculus chromosome 15, clone RP24-112I4, complete sequence Length = 166053 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ctgatgcatggaactggagc 204 |||||||||||||||||||| Sbjct: 41700 ctgatgcatggaactggagc 41719
>gb|AC138548.8| Mus musculus chromosome 3, clone RP24-210N9, complete sequence Length = 155964 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 aaaggcttatatttaaaaat 134 |||||||||||||||||||| Sbjct: 46586 aaaggcttatatttaaaaat 46605
>ref|XM_743170.1| Aspergillus fumigatus Af293 chitin synthase C (Afu5g00760) partial mRNA Length = 2571 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 cggcagcaagagcaacttca 525 |||||||||||||||||||| Sbjct: 2301 cggcagcaagagcaacttca 2320
>emb|AJ310833.1|MTR310833 Medicago truncatula genomic DNA, Sy13 locus Length = 2088 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 119 gcttatatttaaaaatggaaggagtact 146 ||||||||||||||| ||| |||||||| Sbjct: 452 gcttatatttaaaaacggagggagtact 425
>gb|AC133572.35| Medicago truncatula clone mth2-10o11, complete sequence Length = 108164 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 gcttatatttaaaaatggaaggag 142 ||||||||||||||||||| |||| Sbjct: 35419 gcttatatttaaaaatggagggag 35442
>gb|AC123571.8| Medicago truncatula clone mth1-14n3, complete sequence Length = 84556 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 ttatatttaaaaatggaaggagta 144 ||||||||||||||||| |||||| Sbjct: 37061 ttatatttaaaaatggagggagta 37038
>gb|AC145021.14| Medicago truncatula clone mth2-23a16, complete sequence Length = 119096 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 119 gcttatatttaaaaatggaaggagtact 146 ||||||||||| ||| |||||||||||| Sbjct: 87923 gcttatatttagaaacggaaggagtact 87950
>gb|AC152752.18| Medicago truncatula clone mth2-89c9, complete sequence Length = 117577 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 cttatatttaaaaatggaaggagt 143 |||||||||||||||||| ||||| Sbjct: 115190 cttatatttaaaaatggagggagt 115167
>gb|AC123575.10| Medicago truncatula clone mth1-31p6, complete sequence Length = 83007 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 119 gcttatatttaaaaatggaaggagtact 146 ||||||||||| ||||||| |||||||| Sbjct: 34539 gcttatatttagaaatggatggagtact 34512
>gb|AC130798.15| Medicago truncatula clone mth2-27f17, complete sequence Length = 92189 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 119 gcttatatttaaaaatggaaggagtact 146 ||||||||||| ||| |||||||||||| Sbjct: 26647 gcttatatttagaaacggaaggagtact 26674
>gb|AC129092.13| Medicago truncatula clone mth2-17n16, complete sequence Length = 104281 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 119 gcttatatttaaaaatggaaggagtact 146 ||||||||||||||| ||| |||||||| Sbjct: 25588 gcttatatttaaaaacggagggagtact 25615
>gb|AC146941.8| Medicago truncatula clone mth2-133o10, complete sequence Length = 134901 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 119 gcttatatttaaaaatggaaggagtact 146 ||||||||||||||| ||| |||||||| Sbjct: 25349 gcttatatttaaaaacggagggagtact 25322
>emb|AL161725.13| Human DNA sequence from clone RP11-165F24 on chromosome 9 Contains the 3' end of the gene for a novel protein (contains FLJ36253 and FLJ00026), 3 novel genes, a 60S ribosomal protein L12 (RPL21) pseudogene and a CpG island, complete sequence Length = 181179 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 atatctaaaaaggcttatat 126 |||||||||||||||||||| Sbjct: 114360 atatctaaaaaggcttatat 114379
>emb|AL136096.7| Human DNA sequence from clone RP1-23D17 on chromosome 6q15-16.2 Contains the SPACA1 gene for sperm acrosome associated 1, part of the CNR1 gene for cannabinoid receptor 1 (brain) and a CpG island, complete sequence Length = 112212 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 aaaaaggcttatatttaaaa 132 |||||||||||||||||||| Sbjct: 7734 aaaaaggcttatatttaaaa 7753
>emb|AL161535.2|ATCHRIV35 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 35 Length = 199280 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 ctttcaaagcccattccaac 554 |||||||||||||||||||| Sbjct: 169191 ctttcaaagcccattccaac 169172
>emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome 3, BAC clone F13I12 Length = 140680 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 ggcagcaagagcaacttcag 526 |||||||||||||||||||| Sbjct: 90786 ggcagcaagagcaacttcag 90805
>emb|AL049751.1|ATF17N18 Arabidopsis thaliana DNA chromosome 4, BAC clone F17N18 (ESSA project) Length = 86377 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 ctttcaaagcccattccaac 554 |||||||||||||||||||| Sbjct: 45306 ctttcaaagcccattccaac 45287
>gb|AC151459.30| Medicago truncatula clone mth2-6e6, complete sequence Length = 129518 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 ttatatttaaaaatggaaggagta 144 ||||||||| |||||||||||||| Sbjct: 78266 ttatatttagaaatggaaggagta 78243
>gb|AC151727.27| Medicago truncatula clone mth2-25p23, complete sequence Length = 123526 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 ttatatttaaaaatggaaggagta 144 ||||||||| |||||||||||||| Sbjct: 36115 ttatatttagaaatggaaggagta 36092
>gb|AC146553.12| Medicago truncatula clone mth2-9e24, complete sequence Length = 136675 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 ttatatttaaaaatggaaggagta 144 ||||||||||||| |||||||||| Sbjct: 74934 ttatatttaaaaacggaaggagta 74911
>gb|AC146333.35| Medicago truncatula clone mth2-8d3, complete sequence Length = 122694 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 ttatatttaaaaatggaaggagta 144 ||||||||||||||||| |||||| Sbjct: 41466 ttatatttaaaaatggagggagta 41489
>emb|BX569781.7| Zebrafish DNA sequence from clone DKEY-72L18 in linkage group 17, complete sequence Length = 170138 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 atctaaaaaggcttatatttaaaa 132 |||||||||||| ||||||||||| Sbjct: 77602 atctaaaaaggcatatatttaaaa 77579
>gb|DP000061.1| Monodelphis domestica target 117 genomic scaffold Length = 360990 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 ctcctctacaaagtccactatcca 365 ||||||| |||||||||||||||| Sbjct: 225089 ctcctcttcaaagtccactatcca 225112
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 ttatatttaaaaatggaaggagta 144 ||||||||||||||||| |||||| Sbjct: 5045697 ttatatttaaaaatggagggagta 5045674
>dbj|AB210361.1| Ciona intestinalis mRNA for transcription factor protein, partial cds, clone: cibd074c06 Length = 1909 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 596 ctgttactgttgcatcagct 615 |||||||||||||||||||| Sbjct: 1140 ctgttactgttgcatcagct 1121
>gb|AC078806.18| Homo sapiens 3 BAC RP11-59B20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 141059 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 tcaccaagatctcctctaca 351 |||||||||||||||||||| Sbjct: 71548 tcaccaagatctcctctaca 71529
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 gataagcaagagatatgctg 409 |||||||||||||||||||| Sbjct: 4367225 gataagcaagagatatgctg 4367244
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 ttatatttaaaaatggaaggagta 144 |||||||| ||||||||||||||| Sbjct: 68025 ttatattttaaaatggaaggagta 68048
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 ttatatttaaaaatggaaggagta 144 |||||||| ||||||||||||||| Sbjct: 9828 ttatattttaaaatggaaggagta 9851
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cagtactagtactacataag 242 |||||||||||||||||||| Sbjct: 128252 cagtactagtactacataag 128271
>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0430F03 Length = 183095 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 ctaaaaaggcttatatttaaaaat 134 ||||||| |||||||||||||||| Sbjct: 3295 ctaaaaatgcttatatttaaaaat 3272
>gb|AF043346.1|AF043346 Zea mays cell wall invertase (incw3) gene, complete cds Length = 6997 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 ttatatttaaaaatggaaggagtacttt 148 |||||||| | ||||||||||||||||| Sbjct: 1830 ttatattttagaatggaaggagtacttt 1857
>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0473D02 Length = 146185 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ccatgttcagtactagtact 235 |||||||||||||||||||| Sbjct: 39613 ccatgttcagtactagtact 39632
>dbj|AP003911.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1368_G08 Length = 107074 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ccatgttcagtactagtact 235 |||||||||||||||||||| Sbjct: 90241 ccatgttcagtactagtact 90260
>dbj|AP003995.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1112_F06 Length = 104419 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 ctaaaaaggcttatatttaaaaat 134 ||||||| |||||||||||||||| Sbjct: 101496 ctaaaaatgcttatatttaaaaat 101473
>emb|CR394531.15| Zebrafish DNA sequence from clone CH211-239M17 in linkage group 22, complete sequence Length = 52918 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 ttcatcaaatgtatcagtct 589 |||||||||||||||||||| Sbjct: 27312 ttcatcaaatgtatcagtct 27331
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/55 (85%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 11 agacattttagagattcna-tatgaaccacatacggagcaaaatgagtgaatcta 64 ||||||||| |||||| | ||| ||| |||||| ||||||||||||||||||| Sbjct: 178003 agacattttggagattgcactataaactacatacaaagcaaaatgagtgaatcta 178057
>gb|AY642925.1| Hordeum vulgare BAC 124C9, complete sequence Length = 12258 Score = 40.1 bits (20), Expect = 9.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 105 aaatatctaaaaaggcttatatttaaaaatggaaggagta 144 |||||||| ||||| ||||||||||| |||| | |||||| Sbjct: 3872 aaatatcttaaaagacttatatttaagaatgaagggagta 3911
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 ttatatttaaaaatggaaggagta 144 ||||||||||||||||| |||||| Sbjct: 5112174 ttatatttaaaaatggagggagta 5112151
>gb|AC132374.4| Mus musculus BAC clone RP24-69E21 from 10, complete sequence Length = 188514 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cacttccatgttcagtacta 230 |||||||||||||||||||| Sbjct: 10483 cacttccatgttcagtacta 10464
>gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, complete sequence Length = 129237 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 ctgatgcatggaactggagc 204 |||||||||||||||||||| Sbjct: 3394 ctgatgcatggaactggagc 3375
>gb|AC133516.3| Mus musculus BAC clone RP23-260G15 from chromosome 10, complete sequence Length = 203750 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cacttccatgttcagtacta 230 |||||||||||||||||||| Sbjct: 23593 cacttccatgttcagtacta 23612
>gb|AC104451.2| Homo sapiens chromosome 3 clone RP11-632N2, complete sequence Length = 173103 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 aaatatctaaaaaggcttatattt 128 |||||||||||||||||| ||||| Sbjct: 145677 aaatatctaaaaaggcttgtattt 145700
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 38 acatacggagcaaaatgagtgaatctac 65 ||||||| |||||||||||| ||||||| Sbjct: 7453 acatacgaagcaaaatgagttaatctac 7480 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,392,861 Number of Sequences: 3902068 Number of extensions: 6392861 Number of successful extensions: 123630 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 122472 Number of HSP's gapped (non-prelim): 1151 length of query: 663 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 640 effective length of database: 17,143,297,704 effective search space: 10971710530560 effective search space used: 10971710530560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
