ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6m07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NOG2_NEUCR (Q7SHR8) Nucleolar GTP-binding protein 2 30 6.7

>NOG2_NEUCR (Q7SHR8) Nucleolar GTP-binding protein 2|
          Length = 619

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -3

Query: 446 KLKPEQLEKTKKIEGWREELKLLE 375
           K+KP  +E+T +++GW++ +  LE
Sbjct: 416 KVKPHHMERTYELKGWKDHIHFLE 439


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,389,077
Number of Sequences: 219361
Number of extensions: 1761288
Number of successful extensions: 4095
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4095
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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