>ref|NM_187514.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 663

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Minus

                                                                       
Query: 375 ctccaaaagcttcagctcttcacgccatccttcaatctttttcgttttctccagttgctc 434
           |||||||||||||||||| ||   ||| ||||| ||||| ||| ||||||| ||||| ||
Sbjct: 636 ctccaaaagcttcagctcctctttccaaccttctatcttcttcattttctcgagttgttc 577

                                                                       
Query: 435 aggcttcaatttttctgggtccccttgcacttgtgcttcggctaaccgtatctttttctt 494
           ||||||||| |||||||| || ||||||||||| ||||| ||||| |||||||| |||||
Sbjct: 576 aggcttcaaattttctggatctccttgcacttgcgcttctgctaagcgtatcttcttctt 517

                                                                    
Query: 495 cagtgctcggattttcttatctatctctggaacagatgactccgtttgtaagttgtc 551
           ||||||||| |||||||||||||| |||||| |||||||||||| || | |||||||
Sbjct: 516 cagtgctcgaattttcttatctatgtctggagcagatgactccgattttgagttgtc 460

>dbj|AK067490.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108L08, full
           insert sequence
          Length = 1206

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Minus

                                                                       
Query: 375 ctccaaaagcttcagctcttcacgccatccttcaatctttttcgttttctccagttgctc 434
           |||||||||||||||||| ||   ||| ||||| ||||| ||| ||||||| ||||| ||
Sbjct: 769 ctccaaaagcttcagctcctctttccaaccttctatcttcttcattttctcgagttgttc 710

                                                                       
Query: 435 aggcttcaatttttctgggtccccttgcacttgtgcttcggctaaccgtatctttttctt 494
           ||||||||| |||||||| || ||||||||||| ||||| ||||| |||||||| |||||
Sbjct: 709 aggcttcaaattttctggatctccttgcacttgcgcttctgctaagcgtatcttcttctt 650

                                                                    
Query: 495 cagtgctcggattttcttatctatctctggaacagatgactccgtttgtaagttgtc 551
           ||||||||| |||||||||||||| |||||| |||||||||||| || | |||||||
Sbjct: 649 cagtgctcgaattttcttatctatgtctggagcagatgactccgattttgagttgtc 593

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 97/113 (85%)
 Strand = Plus / Minus

                                                                           
Query: 375     ctccaaaagcttcagctcttcacgccatccttcaatctttttcgttttctccagttgctc 434
               |||||||||||||||||| ||   ||| ||||| ||||| ||| ||||||| ||||| ||
Sbjct: 8543661 ctccaaaagcttcagctcctctttccaaccttctatcttcttcattttctcgagttgttc 8543602

                                                                    
Query: 435     aggcttcaatttttctgggtccccttgcacttgtgcttcggctaaccgtatct 487
               ||||||||| |||||||| || ||||||||||| ||||| ||||| |||||||
Sbjct: 8543601 aggcttcaaattttctggatctccttgcacttgcgcttctgctaagcgtatct 8543549



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                           
Query: 490     ttcttcagtgctcggattttcttatctatctctggaacagatgactccgtttgtaagttg 549
               |||||||||||||| |||||||||||||| |||||| |||||||||||| || | |||||
Sbjct: 8543020 ttcttcagtgctcgaattttcttatctatgtctggagcagatgactccgattttgagttg 8542961

                 
Query: 550     tc 551
               ||
Sbjct: 8542960 tc 8542959

>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02,
             complete sequence
          Length = 137327

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 97/113 (85%)
 Strand = Plus / Minus

                                                                         
Query: 375   ctccaaaagcttcagctcttcacgccatccttcaatctttttcgttttctccagttgctc 434
             |||||||||||||||||| ||   ||| ||||| ||||| ||| ||||||| ||||| ||
Sbjct: 24633 ctccaaaagcttcagctcctctttccaaccttctatcttcttcattttctcgagttgttc 24574

                                                                  
Query: 435   aggcttcaatttttctgggtccccttgcacttgtgcttcggctaaccgtatct 487
             ||||||||| |||||||| || ||||||||||| ||||| ||||| |||||||
Sbjct: 24573 aggcttcaaattttctggatctccttgcacttgcgcttctgctaagcgtatct 24521



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                         
Query: 490   ttcttcagtgctcggattttcttatctatctctggaacagatgactccgtttgtaagttg 549
             |||||||||||||| |||||||||||||| |||||| |||||||||||| || | |||||
Sbjct: 23992 ttcttcagtgctcgaattttcttatctatgtctggagcagatgactccgattttgagttg 23933

               
Query: 550   tc 551
             ||
Sbjct: 23932 tc 23931

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 97/113 (85%)
 Strand = Plus / Minus

                                                                           
Query: 375     ctccaaaagcttcagctcttcacgccatccttcaatctttttcgttttctccagttgctc 434
               |||||||||||||||||| ||   ||| ||||| ||||| ||| ||||||| ||||| ||
Sbjct: 8541496 ctccaaaagcttcagctcctctttccaaccttctatcttcttcattttctcgagttgttc 8541437

                                                                    
Query: 435     aggcttcaatttttctgggtccccttgcacttgtgcttcggctaaccgtatct 487
               ||||||||| |||||||| || ||||||||||| ||||| ||||| |||||||
Sbjct: 8541436 aggcttcaaattttctggatctccttgcacttgcgcttctgctaagcgtatct 8541384



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                           
Query: 490     ttcttcagtgctcggattttcttatctatctctggaacagatgactccgtttgtaagttg 549
               |||||||||||||| |||||||||||||| |||||| |||||||||||| || | |||||
Sbjct: 8540855 ttcttcagtgctcgaattttcttatctatgtctggagcagatgactccgattttgagttg 8540796

                 
Query: 550     tc 551
               ||
Sbjct: 8540795 tc 8540794

>gb|AY110458.1| Zea mays CL26277_1 mRNA sequence
          Length = 1040

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                       
Query: 451 gggtccccttgcacttgtgcttcggctaaccgtatctttttcttcagtgctcggattttc 510
           ||||| ||||| ||||||||||| ||||| ||||||||      ||||||||| || |||
Sbjct: 451 gggtcaccttgtacttgtgcttcagctaagcgtatcttcnnnnncagtgctcgaatcttc 510

                                  
Query: 511 ttatctatctctggaacagatga 533
           || ||||| |||||| |||||||
Sbjct: 511 ttgtctatgtctggagcagatga 533

>gb|AF189005.5| Homo sapiens chromosome 8 clone CTA-396D5 map q12.1, complete sequence
          Length = 120719

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 99    atgtatgatctttgacaaacc 119
             |||||||||||||||||||||
Sbjct: 95839 atgtatgatctttgacaaacc 95819

>emb|AL450332.19| Human DNA sequence from clone RP11-138M12 on chromosome 6 Contains part
             of a novel gene, complete sequence
          Length = 174678

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 62    gcaacagccatcccatggccaatca 86
             ||||||||||||||||| |||||||
Sbjct: 53476 gcaacagccatcccatgcccaatca 53500

>gb|AC110013.5| Homo sapiens chromosome 8, clone CTA-396D5, complete sequence
          Length = 120724

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 99    atgtatgatctttgacaaacc 119
             |||||||||||||||||||||
Sbjct: 24882 atgtatgatctttgacaaacc 24902

>gb|AC093462.11| Homo sapiens chromosome 18, clone RP11-850A17, complete sequence
          Length = 203485

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 428    gttgctcaggcttcaattttt 448
              |||||||||||||||||||||
Sbjct: 189364 gttgctcaggcttcaattttt 189384

>gb|AC090666.6| Homo sapiens chromosome 18, clone RP11-116K4, complete sequence
          Length = 185255

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 428   gttgctcaggcttcaattttt 448
             |||||||||||||||||||||
Sbjct: 12467 gttgctcaggcttcaattttt 12487

>gb|AC021325.5|AC021325 Homo sapiens chromosome , clone RP11-23N15, complete sequence
          Length = 180568

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 428    gttgctcaggcttcaattttt 448
              |||||||||||||||||||||
Sbjct: 119093 gttgctcaggcttcaattttt 119113

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 220     catttccagcaaacccgtag 239
               ||||||||||||||||||||
Sbjct: 5751398 catttccagcaaacccgtag 5751379



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 82      aatcagttatcacctcaatg 101
               ||||||||||||||||||||
Sbjct: 4394833 aatcagttatcacctcaatg 4394852

>gb|AC122344.3| Mus musculus BAC clone RP23-364M19 from chromosome 9, complete sequence
          Length = 209165

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 509    tcttatctatctctggaaca 528
              ||||||||||||||||||||
Sbjct: 181101 tcttatctatctctggaaca 181120

>emb|CR855865.5| Zebrafish DNA sequence from clone DKEY-267L2 in linkage group 3, complete
              sequence
          Length = 149895

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    aaatgtggtgaaaaatcttc 187
              ||||||||||||||||||||
Sbjct: 146650 aaatgtggtgaaaaatcttc 146669

>emb|AL356269.10| Human DNA sequence from clone RP11-420J12 on chromosome 13, complete
             sequence
          Length = 141895

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   tgatctttgacaaaccgata 123
             ||||||||||||||||||||
Sbjct: 44384 tgatctttgacaaaccgata 44403

>emb|AL008719.1|HS342B11 Human DNA sequence from clone CTA-342B11 on chromosome 22q12.1-12.3
             Contains a novel gene and a CpG island, complete sequence
          Length = 56458

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   tttctccagttgctcaggct 439
             ||||||||||||||||||||
Sbjct: 16307 tttctccagttgctcaggct 16326



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   tttctccagttgctcaggct 439
             ||||||||||||||||||||
Sbjct: 16209 tttctccagttgctcaggct 16228

>emb|Y13216.2|AVHUPSL Anabaena variabilis hupS, hupL genes and 5 unknown open reading
            frames
          Length = 6171

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  catttccagcaaacccgtag 239
            ||||||||||||||||||||
Sbjct: 3821 catttccagcaaacccgtag 3840

>gb|AC166259.3| Mus musculus  BAC RP23-360A24 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 198972

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 129  atataaattttggaactgac 148
            ||||||||||||||||||||
Sbjct: 4680 atataaattttggaactgac 4699

>emb|BX901909.5| Zebrafish DNA sequence from clone CH211-42I14 in linkage group 3,
             complete sequence
          Length = 90216

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   aaatgtggtgaaaaatcttc 187
             ||||||||||||||||||||
Sbjct: 85522 aaatgtggtgaaaaatcttc 85541

>gb|AC145334.12| Pan troglodytes clone rp43-24d7, complete sequence
          Length = 139632

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 420    tttctccagttgctcaggct 439
              ||||||||||||||||||||
Sbjct: 102215 tttctccagttgctcaggct 102196



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 420    tttctccagttgctcaggct 439
              ||||||||||||||||||||
Sbjct: 102117 tttctccagttgctcaggct 102098

>gb|AC148059.3| Callicebus moloch clone LB5-40A6, complete sequence
          Length = 170861

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 156   acatgagacaacaaatgtggtgaaaaatcttc 187
             |||||| |||| ||||||||||| ||||||||
Sbjct: 83232 acatgatacaagaaatgtggtgagaaatcttc 83263

>gb|AC018470.11| Homo sapiens BAC clone RP11-572N21 from 2, complete sequence
          Length = 174437

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 420    tttctccagttgctcaggct 439
              ||||||||||||||||||||
Sbjct: 139885 tttctccagttgctcaggct 139866

>gb|AC051625.6|AC051625 Genomic Sequence For Arabidopsis thaliana Clone F19N02 From Chromosome
             V, complete sequence
          Length = 116461

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 549   gtcagcagcatttgtggaag 568
             ||||||||||||||||||||
Sbjct: 44632 gtcagcagcatttgtggaag 44613

>gb|AC022077.20| Homo sapiens 3 BAC RP11-34I16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 158176

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   tgtatgatctttgacaaacc 119
             ||||||||||||||||||||
Sbjct: 72415 tgtatgatctttgacaaacc 72396

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    catttccagcaaacccgtag 239
              ||||||||||||||||||||
Sbjct: 795024 catttccagcaaacccgtag 795005

>dbj|AB046439.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F26J23
          Length = 94609

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 549   gtcagcagcatttgtggaag 568
             ||||||||||||||||||||
Sbjct: 71675 gtcagcagcatttgtggaag 71694

>emb|CR848839.8| Zebrafish DNA sequence from clone DKEY-7C4 in linkage group 18,
             complete sequence
          Length = 101830

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   ggcttcaatttttctgggtc 455
             ||||||||||||||||||||
Sbjct: 70912 ggcttcaatttttctgggtc 70893

>emb|AL591676.10| Zebrafish DNA sequence from clone BUSM1-259M24 in linkage group 3,
            complete sequence
          Length = 31713

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  aaatgtggtgaaaaatcttc 187
            ||||||||||||||||||||
Sbjct: 9424 aaatgtggtgaaaaatcttc 9443

>gb|AC153520.3| Mus musculus 10 BAC RP23-144O19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 207519

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    atataaattttggaactgac 148
              ||||||||||||||||||||
Sbjct: 120782 atataaattttggaactgac 120763

>gb|U08013.1|ASU08013 Anabaena sp. [NiFe] uptake hydrogenase small subunit (hupS) and
            [NiFe] uptake hydrogenase large subunit (hupL) genes,
            complete cds
          Length = 2876

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  catttccagcaaacccgtag 239
            ||||||||||||||||||||
Sbjct: 1570 catttccagcaaacccgtag 1589

>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold
          Length = 2105003

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 156     acatgagacaacaaatgtggtgaaaaatcttc 187
               |||||| |||| ||||||||||| ||||||||
Sbjct: 1820579 acatgatacaagaaatgtggtgagaaatcttc 1820610

>emb|AL805907.5| Mouse DNA sequence from clone RP23-262M20 on chromosome X, complete
              sequence
          Length = 221439

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 545    agttgtcagcagcatttgtg 564
              ||||||||||||||||||||
Sbjct: 221239 agttgtcagcagcatttgtg 221258

>emb|AL831729.6| Mouse DNA sequence from clone RP23-68J21 on chromosome X, complete
            sequence
          Length = 42344

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 545  agttgtcagcagcatttgtg 564
            ||||||||||||||||||||
Sbjct: 1800 agttgtcagcagcatttgtg 1819


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,609,713
Number of Sequences: 3902068
Number of extensions: 5609713
Number of successful extensions: 157567
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 157350
Number of HSP's gapped (non-prelim): 217
length of query: 586
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 563
effective length of database: 17,143,297,704
effective search space: 9651676607352
effective search space used: 9651676607352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)