| Clone Name | rbags7b04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ref|XM_416948.1| PREDICTED: Gallus gallus similar to Potential p... | 38 | 8.2 | 2 | emb|AL450348.5| Human DNA sequence from clone RP11-149M20 on chr... | 38 | 8.2 | 3 | emb|AL138711.13| Human DNA sequence from clone RP11-495J3 on chr... | 38 | 8.2 | 4 | gb|AC169087.3| Gallus gallus BAC clone CH261-119D18 from chromos... | 38 | 8.2 |
|---|
>ref|XM_416948.1| PREDICTED: Gallus gallus similar to Potential phospholipid-transporting ATPase IH (ATPase class I type 11A) (ATPase IS) (LOC418749), mRNA Length = 3456 Score = 38.2 bits (19), Expect = 8.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 aggtcaaaaagcacatcat 49 ||||||||||||||||||| Sbjct: 2270 aggtcaaaaagcacatcat 2252
>emb|AL450348.5| Human DNA sequence from clone RP11-149M20 on chromosome 6, complete sequence Length = 24621 Score = 38.2 bits (19), Expect = 8.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 ggaactgaaaatatcacca 154 ||||||||||||||||||| Sbjct: 515 ggaactgaaaatatcacca 497
>emb|AL138711.13| Human DNA sequence from clone RP11-495J3 on chromosome 13q12.3-14.11 Contains a ribosomal protein S12 (RPS12) pseudogene and a CpG island, complete sequence Length = 182178 Score = 38.2 bits (19), Expect = 8.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 accaggtcaaaaagcacat 46 ||||||||||||||||||| Sbjct: 65094 accaggtcaaaaagcacat 65112
>gb|AC169087.3| Gallus gallus BAC clone CH261-119D18 from chromosome ul, complete sequence Length = 225652 Score = 38.2 bits (19), Expect = 8.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 aggtcaaaaagcacatcat 49 ||||||||||||||||||| Sbjct: 32837 aggtcaaaaagcacatcat 32819 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 802,949 Number of Sequences: 3902068 Number of extensions: 802949 Number of successful extensions: 45668 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 45662 Number of HSP's gapped (non-prelim): 6 length of query: 168 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 146 effective length of database: 17,147,199,772 effective search space: 2503491166712 effective search space used: 2503491166712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)