ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197133.1| Oryza sativa (japonica cultivar-group) putative... 325 1e-85
2gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 geno... 234 3e-58
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
4gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 234 3e-58
5gb|AY110159.1| Zea mays CL31053_1 mRNA sequence 204 3e-49
6gb|AY104869.1| Zea mays PCO090462 mRNA sequence 76 2e-10
7gb|AC093852.3| Homo sapiens BAC clone RP11-500G9 from 4, complet... 44 0.64
8gb|AY847290.1| Schistosoma japonicum inhibitor of apoptosis prot... 42 2.5
9gb|AY815175.1| Schistosoma japonicum SJCHGC09493 protein mRNA, c... 42 2.5
10ref|XM_535982.2| PREDICTED: Canis familiaris cardiac titin (TTN)... 42 2.5
11gb|AF508982.1| Homo sapiens Na+/Ca2+ exchanger isoform 3 (SLC8A3... 42 2.5
12emb|CR956416.5| Pig DNA sequence from clone PigI-464E6 on chromo... 42 2.5
13gb|AC148981.7| Mus musculus BAC clone RP23-201L15 from chromosom... 42 2.5
14emb|CR847783.6| Zebrafish DNA sequence from clone DKEYP-2C8 in l... 42 2.5
15gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete s... 42 2.5
16emb|BX324156.6| Zebrafish DNA sequence from clone CH211-215C3 in... 42 2.5
17emb|AL135747.4|CNS01DVE Human chromosome 14 DNA sequence BAC R-1... 42 2.5
18emb|AL160191.3|CNS01RGT Human chromosome 14 DNA sequence BAC R-4... 42 2.5
19gb|AC171274.2| Gallus gallus BAC clone CH261-121C13 from chromos... 42 2.5
20emb|AL928888.5| Mouse DNA sequence from clone RP23-390M20 on chr... 42 2.5
21gb|AC164523.4| Mus musculus chromosome 5, clone RP24-245O20, com... 40 10.0
22gb|AC146257.3| Pan troglodytes BAC clone CH251-113A6 from Y, com... 40 10.0
23emb|AL732423.12| Human DNA sequence from clone RP11-345L8 on chr... 40 10.0
24gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 10.0
25gb|AC008810.8| Homo sapiens chromosome 5 clone CTD-2096I23, comp... 40 10.0
26emb|CR380955.1| Candida glabrata strain CBS138 chromosome I comp... 40 10.0
27emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4 40 10.0
28emb|CR407560.11| Zebrafish DNA sequence from clone CH211-180L14,... 40 10.0
29dbj|BS000583.2| Pan troglodytes chromosome Y clone:PTB-614F22, c... 40 10.0
30dbj|BS000591.1| Pan troglodytes chromosome Y clone:PTB-113D22, c... 40 10.0
31gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 10.0
32gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 10.0
33gb|AC007303.7|AC007303 Drosophila melanogaster, chromosome 2R, r... 40 10.0
34gb|AC007085.7|AC007085 Drosophila melanogaster, chromosome 2R, r... 40 10.0
35gb|AE003836.4| Drosophila melanogaster chromosome 2R, section 14... 40 10.0
36gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 10.0
37gb|AC171010.3| Gallus gallus BAC clone CH261-161I5 from chromoso... 40 10.0
38dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 10.0
39emb|AL805950.11| Mouse DNA sequence from clone RP23-134I15 on ch... 40 10.0
40gb|M34390.1|PFAATUBII P.falciparum alpha-tubulin II gene, comple... 40 10.0 
>ref|NM_197133.1| Oryza sativa (japonica cultivar-group) putative chloroplast inner
            envelope protein (OSJNBa0051D19.7), mRNA
          Length = 2967

 Score =  325 bits (164), Expect = 1e-85
 Identities = 301/347 (86%)
 Strand = Plus / Minus

                                                                        
Query: 374  gccttctcggcgctgatgtcgagtaaatactgcaacctcgacagcttgtcctgcttcgga 433
            ||||||||| |||| ||| | || | |||||||||||| |||||||| ||  ||||||||
Sbjct: 2891 gccttctcgtcgcttatgccaagcagatactgcaaccttgacagcttttcaggcttcgga 2832

                                                                        
Query: 434  atgctcttcatgtacacgcagtacaggtcgtcaagctctcgcggagtgggccatgacaag 493
            |||||||||||||| | || |||||| || || |||||||  |  || |||||||| | |
Sbjct: 2831 atgctcttcatgtaaatgccgtacagatcatccagctctcctgatgtaggccatgatagg 2772

                                                                        
Query: 494  ggcttcgaagcaggcaccgncgcgtcacatgcgagcaggtcgttcagtgatgagatcacg 553
            ||||||||||||||||| | |||||| ||||| |||| ||||||||  |||| || ||| 
Sbjct: 2771 ggcttcgaagcaggcacagccgcgtcgcatgcaagcaagtcgttcaaggatgcgaccact 2712

                                                                        
Query: 554  ccatctctcttcttctgccgaagcaaagcaacagcctgaacaagggcattctccaaccta 613
             ||||| |||||||||||||||||| ||||||||| || |||||||| || |||||||||
Sbjct: 2711 tcatctttcttcttctgccgaagcagagcaacagcttggacaagggcgttatccaaccta 2652

                                                                        
Query: 614  accttcgcaatgtcctgaacaatcgacctggccttctcagcacttatgatgagatcagct 673
            | ||||||||||||||| ||||||||| |||||||||||||| | |||||||||||||||
Sbjct: 2651 atcttcgcaatgtcctggacaatcgacttggccttctcagcattaatgatgagatcagct 2592

                                                           
Query: 674  ggcatctttacatacacttcctcttcatcaaattcacctgtgcctga 720
            || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2591 gggatctttacatacacttcctcttcatcaaattcacctgtgcctga 2545
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>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete
             sequence
          Length = 131984

 Score =  234 bits (118), Expect = 3e-58
 Identities = 154/166 (92%)
 Strand = Plus / Minus

                                                                         
Query: 555   catctctcttcttctgccgaagcaaagcaacagcctgaacaagggcattctccaacctaa 614
             ||||| |||||||||||||||||| ||||||||| || |||||||| || ||||||||||
Sbjct: 57791 catctttcttcttctgccgaagcagagcaacagcttggacaagggcgttatccaacctaa 57732

                                                                         
Query: 615   ccttcgcaatgtcctgaacaatcgacctggccttctcagcacttatgatgagatcagctg 674
              ||||||||||||||| ||||||||| |||||||||||||| | ||||||||||||||||
Sbjct: 57731 tcttcgcaatgtcctggacaatcgacttggccttctcagcattaatgatgagatcagctg 57672

                                                           
Query: 675   gcatctttacatacacttcctcttcatcaaattcacctgtgcctga 720
             | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57671 ggatctttacatacacttcctcttcatcaaattcacctgtgcctga 57626



 Score =  109 bits (55), Expect = 1e-20
 Identities = 138/166 (83%)
 Strand = Plus / Minus

                                                                         
Query: 374   gccttctcggcgctgatgtcgagtaaatactgcaacctcgacagcttgtcctgcttcgga 433
             ||||||||| |||| ||| | || | |||||||||||| |||||||| ||  ||||||||
Sbjct: 58255 gccttctcgtcgcttatgccaagcagatactgcaaccttgacagcttttcaggcttcgga 58196

                                                                         
Query: 434   atgctcttcatgtacacgcagtacaggtcgtcaagctctcgcggagtgggccatgacaag 493
             |||||||||||||| | || |||||| || || |||||||  |  || |||||||| | |
Sbjct: 58195 atgctcttcatgtaaatgccgtacagatcatccagctctcctgatgtaggccatgatagg 58136

                                                           
Query: 494   ggcttcgaagcaggcaccgncgcgtcacatgcgagcaggtcgttca 539
             ||||||||||||||||| | |||||| ||||| |||| ||||||||
Sbjct: 58135 ggcttcgaagcaggcacagccgcgtcgcatgcaagcaagtcgttca 58090



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                        
Query: 213   ttggcgccacagcaccgcgtctggcaggagctcgactctgctggctacctaacaaaaaa 271
             ||||||||||||||||  || ||| |||  ||| |||||||||||||||||||||||||
Sbjct: 58410 ttggcgccacagcaccaagtatggtaggtcctcaactctgctggctacctaacaaaaaa 58352
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  234 bits (118), Expect = 3e-58
 Identities = 154/166 (92%)
 Strand = Plus / Plus

                                                                            
Query: 555      catctctcttcttctgccgaagcaaagcaacagcctgaacaagggcattctccaacctaa 614
                ||||| |||||||||||||||||| ||||||||| || |||||||| || ||||||||||
Sbjct: 18155337 catctttcttcttctgccgaagcagagcaacagcttggacaagggcgttatccaacctaa 18155396

                                                                            
Query: 615      ccttcgcaatgtcctgaacaatcgacctggccttctcagcacttatgatgagatcagctg 674
                 ||||||||||||||| ||||||||| |||||||||||||| | ||||||||||||||||
Sbjct: 18155397 tcttcgcaatgtcctggacaatcgacttggccttctcagcattaatgatgagatcagctg 18155456

                                                              
Query: 675      gcatctttacatacacttcctcttcatcaaattcacctgtgcctga 720
                | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18155457 ggatctttacatacacttcctcttcatcaaattcacctgtgcctga 18155502



 Score =  109 bits (55), Expect = 1e-20
 Identities = 138/166 (83%)
 Strand = Plus / Plus

                                                                            
Query: 374      gccttctcggcgctgatgtcgagtaaatactgcaacctcgacagcttgtcctgcttcgga 433
                ||||||||| |||| ||| | || | |||||||||||| |||||||| ||  ||||||||
Sbjct: 18154873 gccttctcgtcgcttatgccaagcagatactgcaaccttgacagcttttcaggcttcgga 18154932

                                                                            
Query: 434      atgctcttcatgtacacgcagtacaggtcgtcaagctctcgcggagtgggccatgacaag 493
                |||||||||||||| | || |||||| || || |||||||  |  || |||||||| | |
Sbjct: 18154933 atgctcttcatgtaaatgccgtacagatcatccagctctcctgatgtaggccatgatagg 18154992

                                                              
Query: 494      ggcttcgaagcaggcaccgncgcgtcacatgcgagcaggtcgttca 539
                ||||||||||||||||| | |||||| ||||| |||| ||||||||
Sbjct: 18154993 ggcttcgaagcaggcacagccgcgtcgcatgcaagcaagtcgttca 18155038



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                           
Query: 213      ttggcgccacagcaccgcgtctggcaggagctcgactctgctggctacctaacaaaaaa 271
                ||||||||||||||||  || ||| |||  ||| |||||||||||||||||||||||||
Sbjct: 18154718 ttggcgccacagcaccaagtatggtaggtcctcaactctgctggctacctaacaaaaaa 18154776
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  234 bits (118), Expect = 3e-58
 Identities = 154/166 (92%)
 Strand = Plus / Plus

                                                                            
Query: 555      catctctcttcttctgccgaagcaaagcaacagcctgaacaagggcattctccaacctaa 614
                ||||| |||||||||||||||||| ||||||||| || |||||||| || ||||||||||
Sbjct: 18164590 catctttcttcttctgccgaagcagagcaacagcttggacaagggcgttatccaacctaa 18164649

                                                                            
Query: 615      ccttcgcaatgtcctgaacaatcgacctggccttctcagcacttatgatgagatcagctg 674
                 ||||||||||||||| ||||||||| |||||||||||||| | ||||||||||||||||
Sbjct: 18164650 tcttcgcaatgtcctggacaatcgacttggccttctcagcattaatgatgagatcagctg 18164709

                                                              
Query: 675      gcatctttacatacacttcctcttcatcaaattcacctgtgcctga 720
                | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18164710 ggatctttacatacacttcctcttcatcaaattcacctgtgcctga 18164755



 Score =  109 bits (55), Expect = 1e-20
 Identities = 138/166 (83%)
 Strand = Plus / Plus

                                                                            
Query: 374      gccttctcggcgctgatgtcgagtaaatactgcaacctcgacagcttgtcctgcttcgga 433
                ||||||||| |||| ||| | || | |||||||||||| |||||||| ||  ||||||||
Sbjct: 18164126 gccttctcgtcgcttatgccaagcagatactgcaaccttgacagcttttcaggcttcgga 18164185

                                                                            
Query: 434      atgctcttcatgtacacgcagtacaggtcgtcaagctctcgcggagtgggccatgacaag 493
                |||||||||||||| | || |||||| || || |||||||  |  || |||||||| | |
Sbjct: 18164186 atgctcttcatgtaaatgccgtacagatcatccagctctcctgatgtaggccatgatagg 18164245

                                                              
Query: 494      ggcttcgaagcaggcaccgncgcgtcacatgcgagcaggtcgttca 539
                ||||||||||||||||| | |||||| ||||| |||| ||||||||
Sbjct: 18164246 ggcttcgaagcaggcacagccgcgtcgcatgcaagcaagtcgttca 18164291



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                           
Query: 213      ttggcgccacagcaccgcgtctggcaggagctcgactctgctggctacctaacaaaaaa 271
                ||||||||||||||||  || ||| |||  ||| |||||||||||||||||||||||||
Sbjct: 18163971 ttggcgccacagcaccaagtatggtaggtcctcaactctgctggctacctaacaaaaaa 18164029
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>gb|AY110159.1| Zea mays CL31053_1 mRNA sequence
          Length = 1344

 Score =  204 bits (103), Expect = 3e-49
 Identities = 207/242 (85%)
 Strand = Plus / Plus

                                                                       
Query: 479 gtgggccatgacaagggcttcgaagcaggcaccgncgcgtcacatgcgagcaggtcgttc 538
           |||||||||||||||||    || ||||| ||||  || ||||||||||||| ||| |||
Sbjct: 509 gtgggccatgacaagggtcgtgatgcagggaccgcagcatcacatgcgagcatgtcattc 568

                                                                       
Query: 539 agtgatgagatcacgccatctctcttcttctgccgaagcaaagcaacagcctgaacaagg 598
           || ||||| | |||  ||||||||||||||||||||||||| |||| |||||| ||||||
Sbjct: 569 agagatgaaagcacatcatctctcttcttctgccgaagcaacgcaatagcctggacaagg 628

                                                                       
Query: 599 gcattctccaacctaaccttcgcaatgtcctgaacaatcgacctggccttctcagcactt 658
           |  ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||| ||||
Sbjct: 629 gagttctccaacctaacctttgcaatatcctgtacaattgacttggccttctcagaactt 688

                                                                       
Query: 659 atgatgagatcagctggcatctttacatacacttcctcttcatcaaattcacctgtgcct 718
           || |||||||||||||| ||||| ||||||| |||||||||||| || || ||||| |||
Sbjct: 689 attatgagatcagctggaatcttcacatacatttcctcttcatcgaaatcccctgtacct 748

             
Query: 719 ga 720
           ||
Sbjct: 749 ga 750
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>gb|AY104869.1| Zea mays PCO090462 mRNA sequence
          Length = 805

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 92/110 (83%)
 Strand = Plus / Minus

                                                                       
Query: 559 tctcttcttctgccgaagcaaagcaacagcctgaacaagggcattctccaacctaacctt 618
           ||||| ||||||| |||| ||  ||| ||||||||||||||  ||||||||||| || ||
Sbjct: 533 tctctccttctgcagaagaaagacaaaagcctgaacaagggagttctccaacctgacttt 474

                                                             
Query: 619 cgcaatgtcctgaacaatcgacctggccttctcagcacttatgatgagat 668
            | ||| | ||||||||| ||| |||||||||||| |||||| |||||||
Sbjct: 473 tgtaatatactgaacaattgacttggccttctcagaacttataatgagat 424
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>gb|AC093852.3| Homo sapiens BAC clone RP11-500G9 from 4, complete sequence
          Length = 158901

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 591    gaacaagggcattctccaacctaacc 616
              |||||||||||||||||||| |||||
Sbjct: 121050 gaacaagggcattctccaacataacc 121075
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>gb|AY847290.1| Schistosoma japonicum inhibitor of apoptosis protein (Sj314C10) mRNA,
            complete cds
          Length = 1631

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 685  atacacttcctcttcatcaaa 705
            |||||||||||||||||||||
Sbjct: 1096 atacacttcctcttcatcaaa 1076
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>gb|AY815175.1| Schistosoma japonicum SJCHGC09493 protein mRNA, complete cds
          Length = 1595

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 685  atacacttcctcttcatcaaa 705
            |||||||||||||||||||||
Sbjct: 1084 atacacttcctcttcatcaaa 1064
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>ref|XM_535982.2| PREDICTED: Canis familiaris cardiac titin (TTN), mRNA
          Length = 36258

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 101   ttgaaagaatgcagcagaaaactgtcaccttgtggtg 137
             |||||| |||| || |||||||||||||||| |||||
Sbjct: 28913 ttgaaacaatggagaagaaaactgtcaccttctggtg 28949
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>gb|AF508982.1| Homo sapiens Na+/Ca2+ exchanger isoform 3 (SLC8A3) gene, promoter region
              and complete cds
          Length = 145118

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 107    gaatgcagcagaaaactgtca 127
              |||||||||||||||||||||
Sbjct: 129073 gaatgcagcagaaaactgtca 129053
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>emb|CR956416.5| Pig DNA sequence from clone PigI-464E6 on chromosome 7, complete
             sequence
          Length = 141597

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 266   aaaaaagtgttctcttcccat 286
             |||||||||||||||||||||
Sbjct: 26869 aaaaaagtgttctcttcccat 26849
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>gb|AC148981.7| Mus musculus BAC clone RP23-201L15 from chromosome 7, complete sequence
          Length = 223522

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 62     aaaagcacagaggagaaacag 82
              |||||||||||||||||||||
Sbjct: 160749 aaaagcacagaggagaaacag 160729
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>emb|CR847783.6| Zebrafish DNA sequence from clone DKEYP-2C8 in linkage group 5,
             complete sequence
          Length = 184144

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 692   tcctcttcatcaaattcacct 712
             |||||||||||||||||||||
Sbjct: 88347 tcctcttcatcaaattcacct 88327
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>gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete sequence
          Length = 125707

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 166   atgtcaggatcatgcaaaaccatgc 190
             ||||||||||||| |||||||||||
Sbjct: 48840 atgtcaggatcattcaaaaccatgc 48816
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>emb|BX324156.6| Zebrafish DNA sequence from clone CH211-215C3 in linkage group 1,
              complete sequence
          Length = 214471

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 102    tgaaagaatgcagcagaaaac 122
              |||||||||||||||||||||
Sbjct: 196841 tgaaagaatgcagcagaaaac 196861
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>emb|AL135747.4|CNS01DVE Human chromosome 14 DNA sequence BAC R-1023I22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 173275

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   gaatgcagcagaaaactgtca 127
             |||||||||||||||||||||
Sbjct: 17529 gaatgcagcagaaaactgtca 17509
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>emb|AL160191.3|CNS01RGT Human chromosome 14 DNA sequence BAC R-486O13 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 206256

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 107    gaatgcagcagaaaactgtca 127
              |||||||||||||||||||||
Sbjct: 203549 gaatgcagcagaaaactgtca 203529
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>gb|AC171274.2| Gallus gallus BAC clone CH261-121C13 from chromosome ul, complete
              sequence
          Length = 218983

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 192    ctagctacaaaacagcagcta 212
              |||||||||||||||||||||
Sbjct: 214858 ctagctacaaaacagcagcta 214878
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>emb|AL928888.5| Mouse DNA sequence from clone RP23-390M20 on chromosome 2, complete
             sequence
          Length = 77974

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    agcacagaggagaaacagaaa 85
             |||||||||||||||||||||
Sbjct: 35601 agcacagaggagaaacagaaa 35581
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>gb|AC164523.4| Mus musculus chromosome 5, clone RP24-245O20, complete sequence
          Length = 156556

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 18    tacaaagggaactgcagtgactgc 41
             |||||||||||||| |||||||||
Sbjct: 25786 tacaaagggaactgaagtgactgc 25763
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>gb|AC146257.3| Pan troglodytes BAC clone CH251-113A6 from Y, complete sequence
          Length = 174522

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     gcacagaggagaaacagaaa 85
              ||||||||||||||||||||
Sbjct: 100490 gcacagaggagaaacagaaa 100471
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>emb|AL732423.12| Human DNA sequence from clone RP11-345L8 on chromosome X Contains the 3'
              end of the SH3KBP1 gene for SH3-domain kinase binding
              protein 1 (CIN85) and the 5' end of the gene for a novel
              protein similar to mitogen-activated protein kinase kinase
              kinase 5 (MAP3K5), complete sequence
          Length = 173520

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     aaagcacagaggagaaacag 82
              ||||||||||||||||||||
Sbjct: 155464 aaagcacagaggagaaacag 155483
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 414     acagcttgtcctgcttcgga 433
               ||||||||||||||||||||
Sbjct: 2936270 acagcttgtcctgcttcgga 2936289
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>gb|AC008810.8| Homo sapiens chromosome 5 clone CTD-2096I23, complete sequence
          Length = 157325

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 108   aatgcagcagaaaactgtcacctt 131
             |||||||||||||||| |||||||
Sbjct: 79523 aatgcagcagaaaactatcacctt 79500
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>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence
          Length = 1089401

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 690    cttcctcttcatcaaattcacctg 713
              |||||| |||||||||||||||||
Sbjct: 740099 cttccttttcatcaaattcacctg 740076
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>emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4
          Length = 272698

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 644   gccttctcagcacttatgat 663
             ||||||||||||||||||||
Sbjct: 96681 gccttctcagcacttatgat 96662
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>emb|CR407560.11| Zebrafish DNA sequence from clone CH211-180L14, complete sequence
          Length = 127482

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 585   cagcctgaacaagggcattc 604
             ||||||||||||||||||||
Sbjct: 94103 cagcctgaacaagggcattc 94122
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>dbj|BS000583.2| Pan troglodytes chromosome Y clone:PTB-614F22, complete sequence
          Length = 158476

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    gcacagaggagaaacagaaa 85
             ||||||||||||||||||||
Sbjct: 45428 gcacagaggagaaacagaaa 45447
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>dbj|BS000591.1| Pan troglodytes chromosome Y clone:PTB-113D22, complete sequence
          Length = 188847

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     gcacagaggagaaacagaaa 85
              ||||||||||||||||||||
Sbjct: 143452 gcacagaggagaaacagaaa 143471
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 66       gcacagaggagaaacagaaa 85
                ||||||||||||||||||||
Sbjct: 16926578 gcacagaggagaaacagaaa 16926559
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 414     acagcttgtcctgcttcgga 433
               ||||||||||||||||||||
Sbjct: 3249258 acagcttgtcctgcttcgga 3249239
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>gb|AC007303.7|AC007303 Drosophila melanogaster, chromosome 2R, region 44E-44F, BAC clone
              BACR43I04, complete sequence
          Length = 169509

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     aaacagaaacggtttcagta 96
              ||||||||||||||||||||
Sbjct: 138170 aaacagaaacggtttcagta 138151
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>gb|AC007085.7|AC007085 Drosophila melanogaster, chromosome 2R, region 44D2-44E1, BAC clone
              BACR21H10, complete sequence
          Length = 166867

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     aaacagaaacggtttcagta 96
              ||||||||||||||||||||
Sbjct: 127030 aaacagaaacggtttcagta 127049
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>gb|AE003836.4| Drosophila melanogaster chromosome 2R, section 14 of 73 of the complete
              sequence
          Length = 259383

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     aaacagaaacggtttcagta 96
              ||||||||||||||||||||
Sbjct: 150288 aaacagaaacggtttcagta 150307
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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 690     cttcctcttcatcaaattca 709
               ||||||||||||||||||||
Sbjct: 1291300 cttcctcttcatcaaattca 1291319
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>gb|AC171010.3| Gallus gallus BAC clone CH261-161I5 from chromosome ul, complete sequence
          Length = 245010

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     gcacagaggagaaacagaaa 85
              ||||||||||||||||||||
Sbjct: 235060 gcacagaggagaaacagaaa 235079
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>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139,
             complete sequence
          Length = 106089

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 549   tcacgccatctctcttcttc 568
             ||||||||||||||||||||
Sbjct: 18924 tcacgccatctctcttcttc 18905
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>emb|AL805950.11| Mouse DNA sequence from clone RP23-134I15 on chromosome 2, complete
             sequence
          Length = 237337

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 553   gccatctctcttcttctgcc 572
             ||||||||||||||||||||
Sbjct: 85584 gccatctctcttcttctgcc 85565
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>gb|M34390.1|PFAATUBII P.falciparum alpha-tubulin II gene, complete cds
          Length = 3706

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 644  gccttctcagcacttatgat 663
            ||||||||||||||||||||
Sbjct: 1920 gccttctcagcacttatgat 1901


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,189,997
Number of Sequences: 3902068
Number of extensions: 7189997
Number of successful extensions: 139473
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139069
Number of HSP's gapped (non-prelim): 399
length of query: 728
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 705
effective length of database: 17,143,297,704
effective search space: 12086024881320
effective search space used: 12086024881320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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