ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6m02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193728.1| Oryza sativa (japonica cultivar-group), predic... 287 2e-74
2gb|AF450251.1|AF450251 Oryza sativa blast-resistant mRNA, partia... 287 2e-74
3dbj|AK102473.1| Oryza sativa (japonica cultivar-group) cDNA clon... 287 2e-74
4gb|AF514859.1| Oryza sativa (indica cultivar-group) ATP-dependen... 234 3e-58
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
6dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
7gb|AY109053.1| Zea mays PCO106983 mRNA sequence 155 2e-34
8emb|AL445532.8| Human DNA sequence from clone RP11-263K15 on chr... 44 0.55
9gb|AC182700.2| Populus trichocarpa clone Pop1-73H20, complete se... 42 2.2
10emb|AL596327.5| Human DNA sequence from clone RP11-110F24 on chr... 42 2.2
11ref|XM_786052.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.2
12emb|BX571721.8| Zebrafish DNA sequence from clone DKEY-250L23 in... 42 2.2
13gb|AC025428.10| Homo sapiens chromosome 10 clone RP11-475D12, co... 42 2.2
14emb|BX005018.8| Zebrafish DNA sequence from clone DKEY-209K18, c... 42 2.2
15gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome... 40 8.6
16gb|AF038615.1| Caenorhabditis elegans cosmid R02D3, complete seq... 40 8.6
17gb|AC147642.2| Mus musculus BAC clone RP23-27D6 from chromosome ... 40 8.6
18gb|AC125193.3| Mus musculus BAC clone RP23-268I12 from chromosom... 40 8.6
19gb|AC134303.2| Homo sapiens chromosome 19 clone LLNLR-265H6, com... 40 8.6
20gb|BC061232.1| Mus musculus oxoglutarate dehydrogenase (lipoamid... 40 8.6
21gb|AC122046.2| Mus musculus BAC clone RP24-449N4 from 7, complet... 40 8.6
22ref|XM_651128.1| Entamoeba histolytica HM-1:IMSS ubiquitin carbo... 40 8.6
23gb|BC013670.1| Mus musculus oxoglutarate dehydrogenase (lipoamid... 40 8.6
24gb|AF045646.3| Caenorhabditis elegans cosmid F56B3, complete seq... 40 8.6
25emb|AL359762.24| Human DNA sequence from clone RP11-118B23 on ch... 40 8.6
26emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on ch... 40 8.6
27emb|AL035076.1|SPCC417 S.pombe chromosome III cosmid c417 40 8.6
28emb|AL031543.1|SPCC74 S.pombe chromosome III cosmid c74 40 8.6
29gb|AC021956.8| Homo sapiens chromosome 11, clone RP11-447I3, com... 40 8.6
30gb|AC162615.2| Mus musculus chromosome 7, clone RP23-94C20, comp... 40 8.6
31dbj|AK220536.1| Mus musculus mRNA for mKIAA4192 protein 40 8.6
32gb|AC091925.3| Homo sapiens chromosome 5 clone RP11-278J6, compl... 40 8.6
33gb|AC011499.5| Homo sapiens chromosome 19 clone CTB-54O9, comple... 40 8.6
34gb|AC104442.2| Homo sapiens chromosome 3 clone RP11-905F6, compl... 40 8.6
35gb|AC021006.7| Homo sapiens chromosome 11, clone RP11-124G5, com... 40 8.6
36ref|NM_010956.2| Mus musculus oxoglutarate dehydrogenase (lipoam... 40 8.6
37dbj|AK147289.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 8.6
38gb|AC024869.1| Caenorhabditis elegans cosmid Y75B7AL, complete s... 40 8.6
39dbj|AK150009.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 8.6
40gb|AC013603.17| Homo sapiens, clone RP11-10D7, complete sequence 40 8.6
41dbj|AK169286.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 8.6
42ref|NM_001023370.1| Schizosaccharomyces pombe 972h- hypothetical... 40 8.6
43dbj|AK088582.1| Mus musculus 2 days neonate thymus thymic cells ... 40 8.6
44dbj|AK008811.1| Mus musculus adult male stomach cDNA, RIKEN full... 40 8.6
45ref|NM_067479.3| Caenorhabditis elegans R02D3.3 (R02D3.3) mRNA, ... 40 8.6
46dbj|AP000030.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 8.6
47gb|AC138058.2| Homo sapiens chromosome 3 clone RP11-298C2, compl... 40 8.6
48gb|AC155998.2| Xenopus tropicalis clone ISB1-313L20, complete se... 40 8.6
49dbj|AK201619.1| Mus musculus cDNA, clone:Y1G0138N03, strand:minu... 40 8.6
50emb|CR456625.13| Zebrafish DNA sequence from clone DKEY-76G24 in... 40 8.6
51emb|AL163051.5|CNS01RIA Human chromosome 14 DNA sequence BAC R-8... 40 8.6
52dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.6
53gb|AC004066.1|AC004066 Homo sapiens chromosome 4 clone B353C18 m... 40 8.6
54emb|Z11126.1|CEZK643 Caenorhabditis elegans Cosmid ZK643, comple... 40 8.6
55emb|AL672074.19| Mouse DNA sequence from clone RP23-404I18 on ch... 40 8.6
56gb|AC149592.2| Mus musculus BAC clone RP23-270M4 from 14, comple... 40 8.6
57emb|AL626772.10| Mouse DNA sequence from clone RP23-90D4 on chro... 40 8.6
58gb|AC091144.12| Homo sapiens chromosome 8, clone RP11-359B20, co... 40 8.6
59dbj|AP000252.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 8.6
60dbj|AP000212.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 8.6 
>ref|NM_193728.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 954

 Score =  287 bits (145), Expect = 2e-74
 Identities = 256/293 (87%)
 Strand = Plus / Minus

                                                                       
Query: 334 ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 393
           |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 919 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 860

                                                                       
Query: 394 ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 453
           | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 859 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 800

                                                                       
Query: 454 gcacagctcccgatacaggagctaccaatccaagttttccctcgtctataatgctgtcaa 513
           |||||||||| |  | |||||| ||||| ||  | || || || ||||||| ||||||||
Sbjct: 799 gcacagctcctgccaaaggagcaaccaaccccggcttcccttcatctataacgctgtcaa 740

                                                                       
Query: 514 ttattccataatccttggcctcccaaggactcatgaaagagtcgaacctcgtgtcctcat 573
            ||| |||||||||||||| |||||||||||||||||| |||| ||| | || |||||||
Sbjct: 739 ctatgccataatccttggcttcccaaggactcatgaaatagtcaaactttgtatcctcat 680

                                                                
Query: 574 caatctgctcttcaggctttccagtgatccttgacattatcttgttgatcttt 626
           ||||||||||||||||||| || ||||| ||||||| ||| ||||||||||||
Sbjct: 679 caatctgctcttcaggcttcccggtgattcttgacagtattttgttgatcttt 627
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>gb|AF450251.1|AF450251 Oryza sativa blast-resistant mRNA, partial sequence
          Length = 613

 Score =  287 bits (145), Expect = 2e-74
 Identities = 256/293 (87%)
 Strand = Plus / Minus

                                                                       
Query: 334 ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 393
           |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 369 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 310

                                                                       
Query: 394 ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 453
           | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 309 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 250

                                                                       
Query: 454 gcacagctcccgatacaggagctaccaatccaagttttccctcgtctataatgctgtcaa 513
           |||||||||| |  | |||||| ||||| ||  | || || || ||||||| ||||||||
Sbjct: 249 gcacagctcctgccaaaggagcaaccaaccccggcttcccttcatctataacgctgtcaa 190

                                                                       
Query: 514 ttattccataatccttggcctcccaaggactcatgaaagagtcgaacctcgtgtcctcat 573
            ||| |||||||||||||| |||||||||||||||||| |||| ||| | || |||||||
Sbjct: 189 ctatgccataatccttggcttcccaaggactcatgaaatagtcaaactttgtatcctcat 130

                                                                
Query: 574 caatctgctcttcaggctttccagtgatccttgacattatcttgttgatcttt 626
           ||||||||||||||||||| || ||||| ||||||| ||| ||||||||||||
Sbjct: 129 caatctgctcttcaggcttcccggtgattcttgacagtattttgttgatcttt 77
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>dbj|AK102473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094H09, full
           insert sequence
          Length = 1257

 Score =  287 bits (145), Expect = 2e-74
 Identities = 256/293 (87%)
 Strand = Plus / Minus

                                                                       
Query: 334 ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 393
           |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 987 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 928

                                                                       
Query: 394 ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 453
           | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 927 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 868

                                                                       
Query: 454 gcacagctcccgatacaggagctaccaatccaagttttccctcgtctataatgctgtcaa 513
           |||||||||| |  | |||||| ||||| ||  | || || || ||||||| ||||||||
Sbjct: 867 gcacagctcctgccaaaggagcaaccaaccccggcttcccttcatctataacgctgtcaa 808

                                                                       
Query: 514 ttattccataatccttggcctcccaaggactcatgaaagagtcgaacctcgtgtcctcat 573
            ||| |||||||||||||| |||||||||||||||||| |||| ||| | || |||||||
Sbjct: 807 ctatgccataatccttggcttcccaaggactcatgaaatagtcaaactttgtatcctcat 748

                                                                
Query: 574 caatctgctcttcaggctttccagtgatccttgacattatcttgttgatcttt 626
           ||||||||||||||||||| || ||||| ||||||| ||| ||||||||||||
Sbjct: 747 caatctgctcttcaggcttcccggtgattcttgacagtattttgttgatcttt 695
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>gb|AF514859.1| Oryza sativa (indica cultivar-group) ATP-dependent Clp protease
            (Pi-HIT-1) gene, complete cds
          Length = 2750

 Score =  234 bits (118), Expect = 3e-58
 Identities = 214/246 (86%)
 Strand = Plus / Minus

                                                                        
Query: 334  ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 393
            |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 2182 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 2123

                                                                        
Query: 394  ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 453
            | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 2122 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 2063

                                                                        
Query: 454  gcacagctcccgatacaggagctaccaatccaagttttccctcgtctataatgctgtcaa 513
            |||||||||| |  | |||||| ||||| ||  | || || || ||||||| ||||||||
Sbjct: 2062 gcacagctcctgccaaaggagcaaccaaccccggcttcccttcatctataacgctgtcaa 2003

                                                                        
Query: 514  ttattccataatccttggcctcccaaggactcatgaaagagtcgaacctcgtgtcctcat 573
             ||| |||||||||||||| |||||||||||||||||| |||| ||| | || |||||||
Sbjct: 2002 ctatgccataatccttggcttcccaaggactcatgaaatagtcaaactttgtatcctcat 1943

                  
Query: 574  caatct 579
            ||||||
Sbjct: 1942 caatct 1937



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 578  ctgctcttcaggctttccagtgatccttgacattatcttgttgatcttt 626
            ||||||||||||||| || ||||| ||||||| ||| ||||||||||||
Sbjct: 1853 ctgctcttcaggcttcccggtgattcttgacagtattttgttgatcttt 1805
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  234 bits (118), Expect = 3e-58
 Identities = 214/246 (86%)
 Strand = Plus / Minus

                                                                            
Query: 334      ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 393
                |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 17747747 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 17747688

                                                                            
Query: 394      ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 453
                | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 17747687 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 17747628

                                                                            
Query: 454      gcacagctcccgatacaggagctaccaatccaagttttccctcgtctataatgctgtcaa 513
                |||||||||| |  | |||||| ||||| ||  | || || || ||||||| ||||||||
Sbjct: 17747627 gcacagctcctgccaaaggagcaaccaaccccggcttcccttcatctataacgctgtcaa 17747568

                                                                            
Query: 514      ttattccataatccttggcctcccaaggactcatgaaagagtcgaacctcgtgtcctcat 573
                 ||| |||||||||||||| |||||||||||||||||| |||| ||| | || |||||||
Sbjct: 17747567 ctatgccataatccttggcttcccaaggactcatgaaatagtcaaactttgtatcctcat 17747508

                      
Query: 574      caatct 579
                ||||||
Sbjct: 17747507 caatct 17747502



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                 
Query: 578      ctgctcttcaggctttccagtgatccttgacattatcttgttgatcttt 626
                ||||||||||||||| || ||||| ||||||| ||| ||||||||||||
Sbjct: 17747418 ctgctcttcaggcttcccggtgattcttgacagtattttgttgatcttt 17747370
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>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0094H06
          Length = 147245

 Score =  234 bits (118), Expect = 3e-58
 Identities = 214/246 (86%)
 Strand = Plus / Minus

                                                                          
Query: 334    ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 393
              |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 129282 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 129223

                                                                          
Query: 394    ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 453
              | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 129222 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 129163

                                                                          
Query: 454    gcacagctcccgatacaggagctaccaatccaagttttccctcgtctataatgctgtcaa 513
              |||||||||| |  | |||||| ||||| ||  | || || || ||||||| ||||||||
Sbjct: 129162 gcacagctcctgccaaaggagcaaccaaccccggcttcccttcatctataacgctgtcaa 129103

                                                                          
Query: 514    ttattccataatccttggcctcccaaggactcatgaaagagtcgaacctcgtgtcctcat 573
               ||| |||||||||||||| |||||||||||||||||| |||| ||| | || |||||||
Sbjct: 129102 ctatgccataatccttggcttcccaaggactcatgaaatagtcaaactttgtatcctcat 129043

                    
Query: 574    caatct 579
              ||||||
Sbjct: 129042 caatct 129037



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                               
Query: 578    ctgctcttcaggctttccagtgatccttgacattatcttgttgatcttt 626
              ||||||||||||||| || ||||| ||||||| ||| ||||||||||||
Sbjct: 128953 ctgctcttcaggcttcccggtgattcttgacagtattttgttgatcttt 128905
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>gb|AY109053.1| Zea mays PCO106983 mRNA sequence
          Length = 704

 Score =  155 bits (78), Expect = 2e-34
 Identities = 255/314 (81%)
 Strand = Plus / Plus

                                                                       
Query: 312 gcctccttcagcattccatcagctccacttacgctgccattaccatttcgaatgagcttt 371
           |||||||| ||| |||||||| ||||| || | || || ||||||||  |||| || || 
Sbjct: 176 gcctccttgagctttccatcatctccagttgcacttccgttaccattgtgaattagtttc 235

                                                                       
Query: 372 tcctctgaaggtagatttttcattatttttctagttggtcctgaagcgttccacaagtac 431
           |||||||||||||||| |||||| || || || || || || ||||| ||||||||||||
Sbjct: 236 tcctctgaaggtagatgtttcatgatcttcctggtcggccccgaagccttccacaagtac 295

                                                                       
Query: 432 cacatacgtgattttgggggtggcacagctcccgatacaggagctaccaatccaagtttt 491
           |||| ||| ||||| || || || |||| ||| |  |  ||||||||||| ||  |||| 
Sbjct: 296 cacacacgcgatttgggaggcggaacagatcctgccaagggagctaccaaccctggtttc 355

                                                                       
Query: 492 ccctcgtctataatgctgtcaattattccataatccttggcctcccaaggactcatgaaa 551
           ||||| ||||| ||  |||||| ||| |||||||||||||| ||| ||||||||||||||
Sbjct: 356 ccctcatctatgatattgtcaactatcccataatccttggcttccgaaggactcatgaaa 415

                                                                       
Query: 552 gagtcgaacctcgtgtcctcatcaatctgctcttcaggctttccagtgatccttgacatt 611
            | || ||| ||||||| |||||||||||||| ||||  |||||||| || || ||||||
Sbjct: 416 taatcaaacttcgtgtcttcatcaatctgctcctcagattttccagtaattctcgacatt 475

                         
Query: 612 atcttgttgatctt 625
           || || ||||||||
Sbjct: 476 attttattgatctt 489
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>emb|AL445532.8| Human DNA sequence from clone RP11-263K15 on chromosome 9 Contains the
             3' end of the NTRK2 gene for Neurotrophic tyrosine kinase,
             receptor, type 2 (TRKB), complete sequence
          Length = 171629

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 389   tttcattatttttctagttggt 410
             ||||||||||||||||||||||
Sbjct: 49835 tttcattatttttctagttggt 49856
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>gb|AC182700.2| Populus trichocarpa clone Pop1-73H20, complete sequence
          Length = 90044

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 127   gaaaaataatattacaataca 147
             |||||||||||||||||||||
Sbjct: 19341 gaaaaataatattacaataca 19321
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>emb|AL596327.5| Human DNA sequence from clone RP11-110F24 on chromosome 1, complete
             sequence
          Length = 94737

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 387   tttttcattatttttctagtt 407
             |||||||||||||||||||||
Sbjct: 33427 tttttcattatttttctagtt 33447
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>ref|XM_786052.1| PREDICTED: Strongylocentrotus purpuratus similar to
           PRIP-interacting protein PIPMT (LOC586264), mRNA
          Length = 4308

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 gtgtcctcatcaatctgctcttcaggctttcca 596
           ||||| ||||||  |||||||||||||||||||
Sbjct: 602 gtgtcatcatcacgctgctcttcaggctttcca 570
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>emb|BX571721.8| Zebrafish DNA sequence from clone DKEY-250L23 in linkage group 8,
              complete sequence
          Length = 168402

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 361    gaatgagcttttcctctgaag 381
              |||||||||||||||||||||
Sbjct: 132435 gaatgagcttttcctctgaag 132415
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>gb|AC025428.10| Homo sapiens chromosome 10 clone RP11-475D12, complete sequence
          Length = 174906

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 120   tatacaggaaaaataatatta 140
             |||||||||||||||||||||
Sbjct: 81071 tatacaggaaaaataatatta 81051
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>emb|BX005018.8| Zebrafish DNA sequence from clone DKEY-209K18, complete sequence
          Length = 183614

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 361    gaatgagcttttcctctgaag 381
              |||||||||||||||||||||
Sbjct: 111781 gaatgagcttttcctctgaag 111761
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>gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome 7, complete sequence
          Length = 215537

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    aggaaaaataatattacaat 144
              ||||||||||||||||||||
Sbjct: 176658 aggaaaaataatattacaat 176639
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>gb|AF038615.1| Caenorhabditis elegans cosmid R02D3, complete sequence
          Length = 32218

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 358 ttcgaatgagcttttcctctgaag 381
           ||||| ||||||||||||||||||
Sbjct: 605 ttcgattgagcttttcctctgaag 628
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>gb|AC147642.2| Mus musculus BAC clone RP23-27D6 from chromosome 14, complete sequence
          Length = 212100

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 571    catcaatctgctcttcaggc 590
              ||||||||||||||||||||
Sbjct: 108427 catcaatctgctcttcaggc 108446
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>gb|AC125193.3| Mus musculus BAC clone RP23-268I12 from chromosome 14, complete
             sequence
          Length = 167771

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   catcaatctgctcttcaggc 590
             ||||||||||||||||||||
Sbjct: 30322 catcaatctgctcttcaggc 30341
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>gb|AC134303.2| Homo sapiens chromosome 19 clone LLNLR-265H6, complete sequence
          Length = 42236

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 566   gtcctcatcaatctgctctt 585
             ||||||||||||||||||||
Sbjct: 16054 gtcctcatcaatctgctctt 16035
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>gb|BC061232.1| Mus musculus oxoglutarate dehydrogenase (lipoamide), mRNA (cDNA
           clone IMAGE:6535602), complete cds
          Length = 1980

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 409 gtcctgaagcgttccacaagtacc 432
           |||||||||| |||||||||||||
Sbjct: 76  gtcctgaagccttccacaagtacc 53
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>gb|AC122046.2| Mus musculus BAC clone RP24-449N4 from 7, complete sequence
          Length = 150101

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   aggaaaaataatattacaat 144
             ||||||||||||||||||||
Sbjct: 70766 aggaaaaataatattacaat 70785
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>ref|XM_651128.1| Entamoeba histolytica HM-1:IMSS ubiquitin carboxyl-terminal hydrolase
            (16.t00053) partial mRNA
          Length = 5580

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 382  gtagatttttcattattttt 401
            ||||||||||||||||||||
Sbjct: 1354 gtagatttttcattattttt 1335
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>gb|BC013670.1| Mus musculus oxoglutarate dehydrogenase (lipoamide), mRNA (cDNA
           clone MGC:19042 IMAGE:4188988), complete cds
          Length = 4035

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 409 gtcctgaagcgttccacaagtacc 432
           |||||||||| |||||||||||||
Sbjct: 54  gtcctgaagccttccacaagtacc 31
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>gb|AF045646.3| Caenorhabditis elegans cosmid F56B3, complete sequence
          Length = 39874

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   agatttttcattatttttct 403
             ||||||||||||||||||||
Sbjct: 36239 agatttttcattatttttct 36258
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>emb|AL359762.24| Human DNA sequence from clone RP11-118B23 on chromosome 1 Contains
            the 3' end of the gene for RNA processing factor 1
            (RPF1), the GNG5 gene for guanine nucleotide binding
            protein (G protein), gamma 5, the SPATA1 gene for
            spermatogenesis associated 1, the CTBS gene for
            chitobiase, di-N-acetyl- and a CpG island, complete
            sequence
          Length = 125565

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 386  atttttcattatttttctag 405
            ||||||||||||||||||||
Sbjct: 6107 atttttcattatttttctag 6126
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>emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on chromosome 11, complete
              sequence
          Length = 232408

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 409    gtcctgaagcgttccacaagtacc 432
              |||||||||| |||||||||||||
Sbjct: 104189 gtcctgaagccttccacaagtacc 104166
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>emb|AL035076.1|SPCC417 S.pombe chromosome III cosmid c417
          Length = 40383

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   acatatctcaagttgatgag 311
             ||||||||||||||||||||
Sbjct: 15747 acatatctcaagttgatgag 15728
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>emb|AL031543.1|SPCC74 S.pombe chromosome III cosmid c74
          Length = 35637

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 570   tcatcaatctgctcttcagg 589
             ||||||||||||||||||||
Sbjct: 28569 tcatcaatctgctcttcagg 28550
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>gb|AC021956.8| Homo sapiens chromosome 11, clone RP11-447I3, complete sequence
          Length = 197864

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 389    tttcattatttttctagttg 408
              ||||||||||||||||||||
Sbjct: 178905 tttcattatttttctagttg 178924
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>gb|AC162615.2| Mus musculus chromosome 7, clone RP23-94C20, complete sequence
          Length = 130735

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 378   gaaggtagatttttcattattttt 401
             ||||||||||||| ||||||||||
Sbjct: 41590 gaaggtagattttgcattattttt 41567
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>dbj|AK220536.1| Mus musculus mRNA for mKIAA4192 protein
          Length = 4089

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 409 gtcctgaagcgttccacaagtacc 432
           |||||||||| |||||||||||||
Sbjct: 82  gtcctgaagccttccacaagtacc 59
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>gb|AC091925.3| Homo sapiens chromosome 5 clone RP11-278J6, complete sequence
          Length = 164668

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    atcctaaccccatggtgatg 277
              ||||||||||||||||||||
Sbjct: 140259 atcctaaccccatggtgatg 140278
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>gb|AC011499.5| Homo sapiens chromosome 19 clone CTB-54O9, complete sequence
          Length = 199776

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 566  gtcctcatcaatctgctctt 585
            ||||||||||||||||||||
Sbjct: 1264 gtcctcatcaatctgctctt 1245
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>gb|AC104442.2| Homo sapiens chromosome 3 clone RP11-905F6, complete sequence
          Length = 219227

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 370  tttcctctgaaggtagattt 389
            ||||||||||||||||||||
Sbjct: 4734 tttcctctgaaggtagattt 4715
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>gb|AC021006.7| Homo sapiens chromosome 11, clone RP11-124G5, complete sequence
          Length = 183772

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 389   tttcattatttttctagttg 408
             ||||||||||||||||||||
Sbjct: 87166 tttcattatttttctagttg 87185
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>ref|NM_010956.2| Mus musculus oxoglutarate dehydrogenase (lipoamide) (Ogdh), mRNA
          Length = 6638

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 409 gtcctgaagcgttccacaagtacc 432
           |||||||||| |||||||||||||
Sbjct: 121 gtcctgaagccttccacaagtacc 98
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>dbj|AK147289.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:M5C1007N08 product:oxoglutarate dehydrogenase
           (lipoamide), full insert sequence
          Length = 6638

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 409 gtcctgaagcgttccacaagtacc 432
           |||||||||| |||||||||||||
Sbjct: 121 gtcctgaagccttccacaagtacc 98
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>gb|AC024869.1| Caenorhabditis elegans cosmid Y75B7AL, complete sequence
          Length = 58947

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 609   attatcttgttgatcttttc 628
             ||||||||||||||||||||
Sbjct: 33758 attatcttgttgatcttttc 33739
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>dbj|AK150009.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530117I02 product:oxoglutarate
           dehydrogenase (lipoamide), full insert sequence
          Length = 4127

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 409 gtcctgaagcgttccacaagtacc 432
           |||||||||| |||||||||||||
Sbjct: 86  gtcctgaagccttccacaagtacc 63
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>gb|AC013603.17| Homo sapiens, clone RP11-10D7, complete sequence
          Length = 177839

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   ggaaaaataatattacaata 145
             ||||||||||||||||||||
Sbjct: 16833 ggaaaaataatattacaata 16852
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>dbj|AK169286.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:I920176A16 product:oxoglutarate dehydrogenase
           (lipoamide), full insert sequence
          Length = 4155

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 409 gtcctgaagcgttccacaagtacc 432
           |||||||||| |||||||||||||
Sbjct: 112 gtcctgaagccttccacaagtacc 89
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>ref|NM_001023370.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC74.06),
            partial mRNA
          Length = 7035

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 570  tcatcaatctgctcttcagg 589
            ||||||||||||||||||||
Sbjct: 4328 tcatcaatctgctcttcagg 4309
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>dbj|AK088582.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430020N12
           product:oxoglutarate dehydrogenase (lipoamide) (EC
           1.2.4.2) E1 component (fragment) homolog [Mus musculus],
           full insert sequence
          Length = 3554

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 409 gtcctgaagcgttccacaagtacc 432
           |||||||||| |||||||||||||
Sbjct: 48  gtcctgaagccttccacaagtacc 25
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>dbj|AK008811.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched
           library, clone:2210403E04 product:unclassifiable, full
           insert sequence
          Length = 779

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 409 gtcctgaagcgttccacaagtacc 432
           |||||||||| |||||||||||||
Sbjct: 76  gtcctgaagccttccacaagtacc 53
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>ref|NM_067479.3| Caenorhabditis elegans R02D3.3 (R02D3.3) mRNA, complete cds
          Length = 1628

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 358  ttcgaatgagcttttcctctgaag 381
            ||||| ||||||||||||||||||
Sbjct: 1463 ttcgattgagcttttcctctgaag 1440
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>dbj|AP000030.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 1/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   atcctaaccccatggtgatg 277
             ||||||||||||||||||||
Sbjct: 84357 atcctaaccccatggtgatg 84376
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>gb|AC138058.2| Homo sapiens chromosome 3 clone RP11-298C2, complete sequence
          Length = 154123

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 370   tttcctctgaaggtagattt 389
             ||||||||||||||||||||
Sbjct: 79348 tttcctctgaaggtagattt 79329
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>gb|AC155998.2| Xenopus tropicalis clone ISB1-313L20, complete sequence
          Length = 86223

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   tttttcattatttttctagt 406
             ||||||||||||||||||||
Sbjct: 79753 tttttcattatttttctagt 79734
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>dbj|AK201619.1| Mus musculus cDNA, clone:Y1G0138N03, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000064907, based on BLAT search
          Length = 172

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 409 gtcctgaagcgttccacaagtacc 432
           |||||||||| |||||||||||||
Sbjct: 70  gtcctgaagccttccacaagtacc 47
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>emb|CR456625.13| Zebrafish DNA sequence from clone DKEY-76G24 in linkage group 12,
              complete sequence
          Length = 228447

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 500    tataatgctgtcaattattc 519
              ||||||||||||||||||||
Sbjct: 121266 tataatgctgtcaattattc 121285
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>emb|AL163051.5|CNS01RIA Human chromosome 14 DNA sequence BAC R-872J21 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188020

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 384   agatttttcattatttttctagtt 407
             ||||||| ||||||||||||||||
Sbjct: 96509 agattttacattatttttctagtt 96532
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>dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, section 55/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    atcctaaccccatggtgatg 277
              ||||||||||||||||||||
Sbjct: 231363 atcctaaccccatggtgatg 231382
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>gb|AC004066.1|AC004066 Homo sapiens chromosome 4 clone B353C18 map 4q25, complete sequence
          Length = 139877

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 121    atacaggaaaaataatattacaat 144
              |||||| |||||||||||||||||
Sbjct: 135824 atacagtaaaaataatattacaat 135847
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>emb|Z11126.1|CEZK643 Caenorhabditis elegans Cosmid ZK643, complete sequence
          Length = 39534

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 387   tttttcattatttttctagt 406
             ||||||||||||||||||||
Sbjct: 15270 tttttcattatttttctagt 15289
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>emb|AL672074.19| Mouse DNA sequence from clone RP23-404I18 on chromosome X, complete
              sequence
          Length = 171593

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 389    tttcattatttttctagttg 408
              ||||||||||||||||||||
Sbjct: 127922 tttcattatttttctagttg 127903
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>gb|AC149592.2| Mus musculus BAC clone RP23-270M4 from 14, complete sequence
          Length = 204601

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 571   catcaatctgctcttcaggc 590
             ||||||||||||||||||||
Sbjct: 76907 catcaatctgctcttcaggc 76888
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>emb|AL626772.10| Mouse DNA sequence from clone RP23-90D4 on chromosome 4, complete
             sequence
          Length = 230614

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   atacaggaaaaataatatta 140
             ||||||||||||||||||||
Sbjct: 77737 atacaggaaaaataatatta 77718
to top
>gb|AC091144.12| Homo sapiens chromosome 8, clone RP11-359B20, complete sequence
          Length = 185872

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 126  ggaaaaataatattacaata 145
            ||||||||||||||||||||
Sbjct: 6533 ggaaaaataatattacaata 6514
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>dbj|AP000252.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
            clone:T650, complete sequence
          Length = 67008

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 258  atcctaaccccatggtgatg 277
            ||||||||||||||||||||
Sbjct: 7200 atcctaaccccatggtgatg 7219
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>dbj|AP000212.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             f43D11-119B8, segment 10/12, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   atcctaaccccatggtgatg 277
             ||||||||||||||||||||
Sbjct: 44351 atcctaaccccatggtgatg 44370


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,939,348
Number of Sequences: 3902068
Number of extensions: 5939348
Number of successful extensions: 353531
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 353178
Number of HSP's gapped (non-prelim): 346
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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