ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6m01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 345 1e-91
2gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic ... 218 2e-53
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 218 2e-53
4dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic D... 218 2e-53
5dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic D... 218 2e-53
6emb|CR388061.11| Zebrafish DNA sequence from clone DKEY-69P22 in... 44 0.60
7gb|AC164597.11| Mus musculus chromosome 15, clone RP23-108H23, c... 42 2.4
8ref|XM_422070.1| PREDICTED: Gallus gallus ribosomal protein L37a... 42 2.4
9gb|AC142110.4| Mus musculus BAC clone RP24-104I11 from chromosom... 42 2.4
10ref|XM_536187.2| PREDICTED: Canis familiaris aggrecan keratan su... 42 2.4
11emb|AL365434.13| Human DNA sequence from clone RP11-236B18 on ch... 42 2.4
12emb|AL353135.32| Human DNA sequence from clone RP11-63L7 on chro... 42 2.4
13gb|AC079399.5| Homo sapiens BAC clone RP11-414P19 from 4, comple... 42 2.4
14gb|AC021878.4| Homo sapiens BAC clone RP11-18N21 from 4, complet... 42 2.4
15gb|U65989.2|CFU65989 Canis familiaris articular cartilage aggrec... 42 2.4
16gb|AC103623.13| Mus musculus chromosome 5, clone RP24-253A20, co... 42 2.4
17gb|AC166253.18| Mus musculus BAC RP23-231M6 (Roswell Park Cance... 40 9.4
18gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2,... 40 9.4
19gb|AC149576.3| Medicago truncatula chromosome 2 BAC clone mte1-1... 40 9.4
20gb|AC122243.3| Mus musculus BAC clone RP23-148C10 from chromosom... 40 9.4
21gb|AC123936.4| Mus musculus BAC clone RP23-408L3 from chromosome... 40 9.4
22gb|AC144726.6| Medicago truncatula clone mth2-7k13, complete seq... 40 9.4
23gb|AC150505.12| Medicago truncatula clone mth2-99l2, complete se... 40 9.4
24emb|AL626787.9| Human DNA sequence from clone RP11-375H19 on chr... 40 9.4
25emb|AL592429.6| Human DNA sequence from clone RP11-12A2 on chrom... 40 9.4
26emb|AL590553.8| Human DNA sequence from clone RP11-272G1 on chro... 40 9.4
27emb|AL353150.25| Human DNA sequence from clone RP11-82L18 on chr... 40 9.4
28gb|AC104574.4| Homo sapiens chromosome 15, clone RP11-259A24, co... 40 9.4
29emb|AL031054.1|HS48G12 Human DNA sequence from clone RP1-48G12 o... 40 9.4
30gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, c... 40 9.4
31emb|BX005427.19| Zebrafish DNA sequence from clone DKEY-24F17 in... 40 9.4
32emb|AL592443.2| Mouse DNA sequence from clone RP23-142M3 on chro... 40 9.4
33gb|AC015989.11| Homo sapiens chromosome 18, clone RP11-215A20, c... 40 9.4
34emb|BX784023.10| Zebrafish DNA sequence from clone DKEY-163F12 i... 40 9.4
35emb|BX548016.7| Zebrafish DNA sequence from clone DKEY-97O7 in l... 40 9.4
36gb|AC118591.7| Mus musculus chromosome 3, clone RP24-93G19, comp... 40 9.4
37emb|AL845306.9| Zebrafish DNA sequence from clone DKEY-217M5 in ... 40 9.4
38emb|AL929182.4| Zebrafish DNA sequence from clone CH211-195E3 in... 40 9.4
39gb|AC165360.3| Mus musculus BAC clone RP23-110L20 from chromosom... 40 9.4
40emb|CR524482.18| Zebrafish DNA sequence from clone DKEY-109F24 i... 40 9.4 
>dbj|AK072887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148F05, full
            insert sequence
          Length = 1998

 Score =  345 bits (174), Expect = 1e-91
 Identities = 271/302 (89%), Gaps = 1/302 (0%)
 Strand = Plus / Minus

                                                                        
Query: 385  gaagttcatcaagtacctcggtaaaatcatctggagggggacatgagaattcaagtgcct 444
            |||||||||  |||||||| |||||||||||||| ||||| ||||||||||||||   ||
Sbjct: 1297 gaagttcattgagtacctcagtaaaatcatctggtggggggcatgagaattcaaggatct 1238

                                                                        
Query: 445  ttcctgaatgaggatgcttgaatccaagcaatgcagcatggagacatggcctgtctatct 504
            ||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 1237 ttcctgagtgaggatgcttaaatccaagcaacgcggcatggagacatggcctgtctatct 1178

                                                                        
Query: 505  ttgataccagatttgaaagatcgccatgatattttgaaggagttctgggtctcagaagtg 564
            |||||| || |||||||||||| | ||||||| ||||||||||||||||||||| |||||
Sbjct: 1177 ttgatatcatatttgaaagatcacaatgatatcttgaaggagttctgggtctcaaaagtg 1118

                                                                        
Query: 565  acaatgtcatgcttttggtacctccatatgtttcatcaccaagcagggggttccctagat 624
            |||||| |||||||||||||||||| ||||||||||| ||||| |||||  ||||||| |
Sbjct: 1117 acaatgccatgcttttggtacctccgtatgtttcatccccaagaaggggaatccctaggt 1058

                                                                        
Query: 625  attttgcatgtgctcggatctgggtgagtgcgccctgtctccaatctccactctaccagt 684
            | |||||||||||||| |||| ||||||| || ||||||||||||||||||||||| |||
Sbjct: 1057 actttgcatgtgctcgaatct-ggtgagttcgtcctgtctccaatctccactctactagt 999

              
Query: 685  gc 686
            ||
Sbjct: 998  gc 997
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>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete
             sequence
          Length = 143507

 Score =  218 bits (110), Expect = 2e-53
 Identities = 161/178 (90%)
 Strand = Plus / Plus

                                                                         
Query: 468   ccaagcaatgcagcatggagacatggcctgtctatctttgataccagatttgaaagatcg 527
             |||||||| || ||||||||||||||||||||||||||||||| || |||||||||||| 
Sbjct: 46391 ccaagcaacgcggcatggagacatggcctgtctatctttgatatcatatttgaaagatca 46450

                                                                         
Query: 528   ccatgatattttgaaggagttctgggtctcagaagtgacaatgtcatgcttttggtacct 587
             | ||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 46451 caatgatatcttgaaggagttctgggtctcaaaagtgacaatgccatgcttttggtacct 46510

                                                                       
Query: 588   ccatatgtttcatcaccaagcagggggttccctagatattttgcatgtgctcggatct 645
             || ||||||||||| ||||| |||||  ||||||| || |||||||||||||| ||||
Sbjct: 46511 ccgtatgtttcatccccaagaaggggaatccctaggtactttgcatgtgctcgaatct 46568



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                         
Query: 385   gaagttcatcaagtacctcggtaaaatcatctggagggggacatgagaattcaagtgcct 444
             |||||||||  |||||||| |||||||||||||| ||||| ||||||||||||||   ||
Sbjct: 46236 gaagttcattgagtacctcagtaaaatcatctggtggggggcatgagaattcaaggatct 46295

                                     
Query: 445   ttcctgaatgaggatgcttgaatc 468
             ||||||| ||||||||||| ||||
Sbjct: 46296 ttcctgagtgaggatgcttaaatc 46319



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 647   ggtgagtgcgccctgtctccaatctccactctaccagtgc 686
             ||||||| || ||||||||||||||||||||||| |||||
Sbjct: 46850 ggtgagttcgtcctgtctccaatctccactctactagtgc 46889
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  218 bits (110), Expect = 2e-53
 Identities = 161/178 (90%)
 Strand = Plus / Plus

                                                                            
Query: 468      ccaagcaatgcagcatggagacatggcctgtctatctttgataccagatttgaaagatcg 527
                |||||||| || ||||||||||||||||||||||||||||||| || |||||||||||| 
Sbjct: 29965694 ccaagcaacgcggcatggagacatggcctgtctatctttgatatcatatttgaaagatca 29965753

                                                                            
Query: 528      ccatgatattttgaaggagttctgggtctcagaagtgacaatgtcatgcttttggtacct 587
                | ||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 29965754 caatgatatcttgaaggagttctgggtctcaaaagtgacaatgccatgcttttggtacct 29965813

                                                                          
Query: 588      ccatatgtttcatcaccaagcagggggttccctagatattttgcatgtgctcggatct 645
                || ||||||||||| ||||| |||||  ||||||| || |||||||||||||| ||||
Sbjct: 29965814 ccgtatgtttcatccccaagaaggggaatccctaggtactttgcatgtgctcgaatct 29965871



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                            
Query: 385      gaagttcatcaagtacctcggtaaaatcatctggagggggacatgagaattcaagtgcct 444
                |||||||||  |||||||| |||||||||||||| ||||| ||||||||||||||   ||
Sbjct: 29965539 gaagttcattgagtacctcagtaaaatcatctggtggggggcatgagaattcaaggatct 29965598

                                        
Query: 445      ttcctgaatgaggatgcttgaatc 468
                ||||||| ||||||||||| ||||
Sbjct: 29965599 ttcctgagtgaggatgcttaaatc 29965622



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 647      ggtgagtgcgccctgtctccaatctccactctaccagtgc 686
                ||||||| || ||||||||||||||||||||||| |||||
Sbjct: 29966153 ggtgagttcgtcctgtctccaatctccactctactagtgc 29966192
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>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0541C02
          Length = 150660

 Score =  218 bits (110), Expect = 2e-53
 Identities = 161/178 (90%)
 Strand = Plus / Plus

                                                                         
Query: 468   ccaagcaatgcagcatggagacatggcctgtctatctttgataccagatttgaaagatcg 527
             |||||||| || ||||||||||||||||||||||||||||||| || |||||||||||| 
Sbjct: 41842 ccaagcaacgcggcatggagacatggcctgtctatctttgatatcatatttgaaagatca 41901

                                                                         
Query: 528   ccatgatattttgaaggagttctgggtctcagaagtgacaatgtcatgcttttggtacct 587
             | ||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 41902 caatgatatcttgaaggagttctgggtctcaaaagtgacaatgccatgcttttggtacct 41961

                                                                       
Query: 588   ccatatgtttcatcaccaagcagggggttccctagatattttgcatgtgctcggatct 645
             || ||||||||||| ||||| |||||  ||||||| || |||||||||||||| ||||
Sbjct: 41962 ccgtatgtttcatccccaagaaggggaatccctaggtactttgcatgtgctcgaatct 42019



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                         
Query: 385   gaagttcatcaagtacctcggtaaaatcatctggagggggacatgagaattcaagtgcct 444
             |||||||||  |||||||| |||||||||||||| ||||| ||||||||||||||   ||
Sbjct: 41687 gaagttcattgagtacctcagtaaaatcatctggtggggggcatgagaattcaaggatct 41746

                                     
Query: 445   ttcctgaatgaggatgcttgaatc 468
             ||||||| ||||||||||| ||||
Sbjct: 41747 ttcctgagtgaggatgcttaaatc 41770



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 647   ggtgagtgcgccctgtctccaatctccactctaccagtgc 686
             ||||||| || ||||||||||||||||||||||| |||||
Sbjct: 42301 ggtgagttcgtcctgtctccaatctccactctactagtgc 42340
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>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0481E08
          Length = 171965

 Score =  218 bits (110), Expect = 2e-53
 Identities = 161/178 (90%)
 Strand = Plus / Plus

                                                                          
Query: 468    ccaagcaatgcagcatggagacatggcctgtctatctttgataccagatttgaaagatcg 527
              |||||||| || ||||||||||||||||||||||||||||||| || |||||||||||| 
Sbjct: 161207 ccaagcaacgcggcatggagacatggcctgtctatctttgatatcatatttgaaagatca 161266

                                                                          
Query: 528    ccatgatattttgaaggagttctgggtctcagaagtgacaatgtcatgcttttggtacct 587
              | ||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 161267 caatgatatcttgaaggagttctgggtctcaaaagtgacaatgccatgcttttggtacct 161326

                                                                        
Query: 588    ccatatgtttcatcaccaagcagggggttccctagatattttgcatgtgctcggatct 645
              || ||||||||||| ||||| |||||  ||||||| || |||||||||||||| ||||
Sbjct: 161327 ccgtatgtttcatccccaagaaggggaatccctaggtactttgcatgtgctcgaatct 161384



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                          
Query: 385    gaagttcatcaagtacctcggtaaaatcatctggagggggacatgagaattcaagtgcct 444
              |||||||||  |||||||| |||||||||||||| ||||| ||||||||||||||   ||
Sbjct: 161052 gaagttcattgagtacctcagtaaaatcatctggtggggggcatgagaattcaaggatct 161111

                                      
Query: 445    ttcctgaatgaggatgcttgaatc 468
              ||||||| ||||||||||| ||||
Sbjct: 161112 ttcctgagtgaggatgcttaaatc 161135



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                      
Query: 647    ggtgagtgcgccctgtctccaatctccactctaccagtgc 686
              ||||||| || ||||||||||||||||||||||| |||||
Sbjct: 161666 ggtgagttcgtcctgtctccaatctccactctactagtgc 161705
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>emb|CR388061.11| Zebrafish DNA sequence from clone DKEY-69P22 in linkage group 5,
             complete sequence
          Length = 122069

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 6     ttccagtgtattttacatctctatac 31
             |||||| |||||||||||||||||||
Sbjct: 24697 ttccagggtattttacatctctatac 24722
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>gb|AC164597.11| Mus musculus chromosome 15, clone RP23-108H23, complete sequence
          Length = 190235

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 153    aaattcctggagcttctttct 173
              |||||||||||||||||||||
Sbjct: 174474 aaattcctggagcttctttct 174494
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>ref|XM_422070.1| PREDICTED: Gallus gallus ribosomal protein L37a (LOC396031), mRNA
          Length = 3338

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 590 atatgtttcatcaccaagcag 610
           |||||||||||||||||||||
Sbjct: 570 atatgtttcatcaccaagcag 590
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>gb|AC142110.4| Mus musculus BAC clone RP24-104I11 from chromosome 7, complete sequence
          Length = 177085

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 251   atgccacaagtccaaacacct 271
             |||||||||||||||||||||
Sbjct: 58284 atgccacaagtccaaacacct 58264
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>ref|XM_536187.2| PREDICTED: Canis familiaris aggrecan keratan sulfate domain (AGC1),
            mRNA
          Length = 7121

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 327  agtcacacttgagcagcattgtcac 351
            |||||||| ||||||||||||||||
Sbjct: 6461 agtcacacctgagcagcattgtcac 6485
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>emb|AL365434.13| Human DNA sequence from clone RP11-236B18 on chromosome 10 Contains three
              novel genes and a DEAD/H (Asp-Glu-Ala-Asp/His) box
              polypeptide 18 (Myc-regulated) (DDX18) pseudogene, complete
              sequence
          Length = 158357

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 662    tctccaatctccactctacca 682
              |||||||||||||||||||||
Sbjct: 117313 tctccaatctccactctacca 117293
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>emb|AL353135.32| Human DNA sequence from clone RP11-63L7 on chromosome 6 Contains the
             PROL2 gene for proline rich 2 (proline-rich protein with
             nuclear targeting signal), the gene for NB4
             apoptosis/differentiation related protein (PNAS-145), the
             gene for serine-arginine repressor protein (35kDa)
             (SRrp35), the gene for a novel protein similar to putative
             amidohydrolase, the 3' end of the GABRR1 gene for
             gamma-aminobutyric acid (GABA) receptor, rho 1 and 3 CpG
             islands, complete sequence
          Length = 127653

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 108   taaacatagaaaagagcactaaaaatatg 136
             ||||||||||||||| |||||||||||||
Sbjct: 41274 taaacatagaaaaga-cactaaaaatatg 41247
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>gb|AC079399.5| Homo sapiens BAC clone RP11-414P19 from 4, complete sequence
          Length = 169035

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 108    taaacatagaaaagagcactaaaaatatg 136
              ||||||||||||||| || ||||||||||
Sbjct: 112398 taaacatagaaaagaacaataaaaatatg 112426
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>gb|AC021878.4| Homo sapiens BAC clone RP11-18N21 from 4, complete sequence
          Length = 161391

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 117   aaaagagcactaaaaatatgtctcc 141
             |||||| ||||||||||||||||||
Sbjct: 69599 aaaagaccactaaaaatatgtctcc 69575
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>gb|U65989.2|CFU65989 Canis familiaris articular cartilage aggrecan precursor, mRNA,
            complete cds
          Length = 7104

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 327  agtcacacttgagcagcattgtcac 351
            |||||||| ||||||||||||||||
Sbjct: 6464 agtcacacctgagcagcattgtcac 6488
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>gb|AC103623.13| Mus musculus chromosome 5, clone RP24-253A20, complete sequence
          Length = 170641

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 300   gcattttatgtgttctccatt 320
             |||||||||||||||||||||
Sbjct: 86555 gcattttatgtgttctccatt 86575
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>gb|AC166253.18| Mus musculus  BAC RP23-231M6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 207999

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 221   cactccatcagtttggccactcactcag 248
             ||||||||||||||||| |||| |||||
Sbjct: 43744 cactccatcagtttggcgactctctcag 43771
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>gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence
          Length = 81567

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ttacttaaacatagaaaaga 122
             ||||||||||||||||||||
Sbjct: 60761 ttacttaaacatagaaaaga 60780
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>gb|AC149576.3| Medicago truncatula chromosome 2 BAC clone mte1-17c12, complete
             sequence
          Length = 75005

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   attttatgtgttctccattt 321
             ||||||||||||||||||||
Sbjct: 26536 attttatgtgttctccattt 26517
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>gb|AC122243.3| Mus musculus BAC clone RP23-148C10 from chromosome 17, complete sequence
          Length = 204584

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 484    ggagacatggcctgtctatctttg 507
              ||||||||||||||||||| ||||
Sbjct: 188654 ggagacatggcctgtctatatttg 188677
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>gb|AC123936.4| Mus musculus BAC clone RP23-408L3 from chromosome 15, complete sequence
          Length = 221204

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    ttcctggagcttctttcttg 175
              ||||||||||||||||||||
Sbjct: 122674 ttcctggagcttctttcttg 122693
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>gb|AC144726.6| Medicago truncatula clone mth2-7k13, complete sequence
          Length = 138586

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   attttatgtgttctccattt 321
             ||||||||||||||||||||
Sbjct: 15278 attttatgtgttctccattt 15259
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>gb|AC150505.12| Medicago truncatula clone mth2-99l2, complete sequence
          Length = 111277

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   attttatgtgttctccattt 321
             ||||||||||||||||||||
Sbjct: 83255 attttatgtgttctccattt 83236
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>emb|AL626787.9| Human DNA sequence from clone RP11-375H19 on chromosome 1 Contains the
             3' end of a novel gene, complete sequence
          Length = 71885

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    ctaaaatgattttaacacac 74
             ||||||||||||||||||||
Sbjct: 69158 ctaaaatgattttaacacac 69177
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>emb|AL592429.6| Human DNA sequence from clone RP11-12A2 on chromosome 6 Contains a DnaJ
             (Hsp40) homolog subfamily C member 7 (DNAJC7) pseudogene,
             the CITED2 gene for Cbp/p300-interacting transactivator
             with Glu/Asp-rich carboxy-terminal domain 2 (MRG1, P35SRJ)
             and a putative novel gene. Contains two CpG islands,
             complete sequence
          Length = 167460

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 464   gaatccaagcaatgcagcat 483
             ||||||||||||||||||||
Sbjct: 70051 gaatccaagcaatgcagcat 70070
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>emb|AL590553.8| Human DNA sequence from clone RP11-272G1 on chromosome 6, complete
             sequence
          Length = 171882

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   aaaagagcactaaaaatatg 136
             ||||||||||||||||||||
Sbjct: 98094 aaaagagcactaaaaatatg 98113
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>emb|AL353150.25| Human DNA sequence from clone RP11-82L18 on chromosome 9 Contains the
             3' end of a novel gene (SHC3) and a novel gene, complete
             sequence
          Length = 113051

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 652   gtgcgccctgtctccaatct 671
             ||||||||||||||||||||
Sbjct: 36082 gtgcgccctgtctccaatct 36101
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>gb|AC104574.4| Homo sapiens chromosome 15, clone RP11-259A24, complete sequence
          Length = 152130

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 108   taaacatagaaaaga-gcactaaaaata 134
             ||||||||||||||| ||||||||||||
Sbjct: 68387 taaacatagaaaagatgcactaaaaata 68414
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>emb|AL031054.1|HS48G12 Human DNA sequence from clone RP1-48G12 on chromosome Xq27.1-27.3
              Contains a CpG island, complete sequence
          Length = 199016

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    tttggccactcactcagaga 251
              ||||||||||||||||||||
Sbjct: 138479 tttggccactcactcagaga 138460
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>gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, complete sequence
          Length = 207799

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   tctgggtctcagaagtgaca 567
             ||||||||||||||||||||
Sbjct: 89460 tctgggtctcagaagtgaca 89479
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>emb|BX005427.19| Zebrafish DNA sequence from clone DKEY-24F17 in linkage group 20
            Contains the gene for a novel protein similar to elastase
            2, the 3' end of the alas2 gene for aminolevulinate,
            delta-, synthetase 2, the gene for a novel elastase
            protein (zgc:637440), two novel genes and two CpG
            islands, complete sequence
          Length = 134851

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  tttgtattagtcacacttga 338
            ||||||||||||||||||||
Sbjct: 5999 tttgtattagtcacacttga 5980
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>emb|AL592443.2| Mouse DNA sequence from clone RP23-142M3 on chromosome 13, complete
              sequence
          Length = 164416

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 468    ccaagcaatgcagcatggagacat 491
              ||||| ||||||||||||||||||
Sbjct: 146341 ccaagtaatgcagcatggagacat 146364
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>gb|AC015989.11| Homo sapiens chromosome 18, clone RP11-215A20, complete sequence
          Length = 184092

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 7     tccagtgtattttacatctctata 30
             ||||||||||||| ||||||||||
Sbjct: 63282 tccagtgtatttttcatctctata 63259
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>emb|BX784023.10| Zebrafish DNA sequence from clone DKEY-163F12 in linkage group 8,
              complete sequence
          Length = 231254

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    tttgtattagtcacacttga 338
              ||||||||||||||||||||
Sbjct: 123704 tttgtattagtcacacttga 123685
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>emb|BX548016.7| Zebrafish DNA sequence from clone DKEY-97O7 in linkage group 7,
             complete sequence
          Length = 125478

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 585   cctccatatgtttcatcacc 604
             ||||||||||||||||||||
Sbjct: 62071 cctccatatgtttcatcacc 62052
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>gb|AC118591.7| Mus musculus chromosome 3, clone RP24-93G19, complete sequence
          Length = 208878

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 540   gaaggagttctgggtctcag 559
             ||||||||||||||||||||
Sbjct: 50878 gaaggagttctgggtctcag 50859
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>emb|AL845306.9| Zebrafish DNA sequence from clone DKEY-217M5 in linkage group 20,
              complete sequence
          Length = 186675

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     tgattttaacacactgcatt 80
              ||||||||||||||||||||
Sbjct: 114127 tgattttaacacactgcatt 114108
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>emb|AL929182.4| Zebrafish DNA sequence from clone CH211-195E3 in linkage group 20,
              complete sequence
          Length = 225515

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    cctgaatgaggatgcttgaa 466
              ||||||||||||||||||||
Sbjct: 135754 cctgaatgaggatgcttgaa 135773
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>gb|AC165360.3| Mus musculus BAC clone RP23-110L20 from chromosome 17, complete sequence
          Length = 217732

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 484    ggagacatggcctgtctatctttg 507
              ||||||||||||||||||| ||||
Sbjct: 129618 ggagacatggcctgtctatatttg 129595
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>emb|CR524482.18| Zebrafish DNA sequence from clone DKEY-109F24 in linkage group 15,
             complete sequence
          Length = 125769

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   aaacatagaaaagagcactaaaaa 132
             |||||||||||| |||||||||||
Sbjct: 74111 aaacatagaaaacagcactaaaaa 74088


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,652,226
Number of Sequences: 3902068
Number of extensions: 6652226
Number of successful extensions: 128940
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 128803
Number of HSP's gapped (non-prelim): 138
length of query: 690
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 667
effective length of database: 17,143,297,704
effective search space: 11434579568568
effective search space used: 11434579568568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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