ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7a22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LEA14_GOSHI (P46518) Late embryogenesis abundant protein Lea14-A 104 3e-34
2LEA14_SOYBN (P46519) Desiccation protectant protein Lea14 homolog 96 2e-32
3LEA14_ARATH (O03983) Putative dessication-related protein LEA14 91 2e-27
4DRPD_CRAPL (P22241) Desiccation-related protein PCC27-45 82 4e-16
5ODPB_ZYMMO (O66113) Pyruvate dehydrogenase E1 component subunit ... 32 0.62
6DPOLA_HUMAN (P09884) DNA polymerase alpha catalytic subunit (EC ... 32 0.81
7DOCK7_HUMAN (Q96N67) Dedicator of cytokinesis protein 7 29 5.3
8Y2594_STRCO (Q9L1I2) Exopolysaccharide phosphotransferase SCO259... 28 6.9

>LEA14_GOSHI (P46518) Late embryogenesis abundant protein Lea14-A|
          Length = 151

 Score =  104 bits (260), Expect(2) = 3e-34
 Identities = 46/64 (71%), Positives = 57/64 (89%)
 Frame = -3

Query: 320 TSLHIPVKVPYDFLVSLMKDAGKDWDLDYEMRVGLTIDLPIVGNFTLPLTKAGELKLPTL 141
           T L +PVKVPY+ LVSL+KD G DWD+DYE+ +GLTIDLPIVGNFT+PL++ GE+KLPTL
Sbjct: 88  TMLDVPVKVPYNILVSLVKDIGADWDIDYELELGLTIDLPIVGNFTIPLSQKGEIKLPTL 147

Query: 140 SDLF 129
           SD+F
Sbjct: 148 SDIF 151



 Score = 58.9 bits (141), Expect(2) = 3e-34
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = -2

Query: 426 YTIPICEISYSLKSAGREVASGTMPDPGSLVASDT 322
           ++IPICEISY+ +SAGR +ASGT+PDPGSL ASDT
Sbjct: 53  HSIPICEISYNFRSAGRGIASGTIPDPGSLKASDT 87



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>LEA14_SOYBN (P46519) Desiccation protectant protein Lea14 homolog|
          Length = 152

 Score = 95.9 bits (237), Expect(2) = 2e-32
 Identities = 40/64 (62%), Positives = 54/64 (84%)
 Frame = -3

Query: 320 TSLHIPVKVPYDFLVSLMKDAGKDWDLDYEMRVGLTIDLPIVGNFTLPLTKAGELKLPTL 141
           T L +PVKVP+  L+SL KD G DWD+DY++ +GL IDLP++GNFT+PL++ GE+KLPTL
Sbjct: 88  TMLDVPVKVPHSILLSLAKDIGADWDIDYQLDLGLVIDLPVIGNFTIPLSQKGEIKLPTL 147

Query: 140 SDLF 129
           SD+F
Sbjct: 148 SDMF 151



 Score = 61.6 bits (148), Expect(2) = 2e-32
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = -2

Query: 420 IPICEISYSLKSAGREVASGTMPDPGSLVASDT 322
           IPICEI YSLKSAG+E+ASGT+PDPGSL ASDT
Sbjct: 55  IPICEIKYSLKSAGKEIASGTIPDPGSLKASDT 87



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>LEA14_ARATH (O03983) Putative dessication-related protein LEA14|
          Length = 151

 Score = 91.3 bits (225), Expect(2) = 2e-27
 Identities = 38/64 (59%), Positives = 50/64 (78%)
 Frame = -3

Query: 320 TSLHIPVKVPYDFLVSLMKDAGKDWDLDYEMRVGLTIDLPIVGNFTLPLTKAGELKLPTL 141
           T+L IPV VPY  L +L +D G DWD+DYE+++GLTIDLP+VG FT+P++  GE+KLPT 
Sbjct: 88  TALDIPVVVPYSILFNLARDVGVDWDIDYELQIGLTIDLPVVGEFTIPISSKGEIKLPTF 147

Query: 140 SDLF 129
            D F
Sbjct: 148 KDFF 151



 Score = 50.1 bits (118), Expect(2) = 2e-27
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = -2

Query: 426 YTIPICEISYSLKSAGREVASGTMPDPGSLVASD 325
           ++IPICEIS++  SAGRE+  G +PDPGSL A D
Sbjct: 53  HSIPICEISFTFHSAGREIGKGKIPDPGSLKAKD 86



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>DRPD_CRAPL (P22241) Desiccation-related protein PCC27-45|
          Length = 151

 Score = 82.4 bits (202), Expect = 4e-16
 Identities = 36/64 (56%), Positives = 49/64 (76%)
 Frame = -3

Query: 320 TSLHIPVKVPYDFLVSLMKDAGKDWDLDYEMRVGLTIDLPIVGNFTLPLTKAGELKLPTL 141
           T L   +KVP+  LVSL+KD G D D+DY + +GL +DLP++GNFT+PL+  GE+KLP L
Sbjct: 88  TMLEPAIKVPHSALVSLIKDIGADMDIDYVLELGLVVDLPVIGNFTIPLSHKGEMKLPGL 147

Query: 140 SDLF 129
           SD+F
Sbjct: 148 SDIF 151



 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 23/48 (47%), Positives = 32/48 (66%)
 Frame = -2

Query: 423 TIPICEISYSLKSAGREVASGTMPDPGSLVASDTNQPPHTREGALRLP 280
           +IP+ EI Y+LKSAGR + SG +PDPGSL  +D        E A+++P
Sbjct: 54  SIPVGEIKYTLKSAGRVIVSGNIPDPGSLKGNDKTM----LEPAIKVP 97



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>ODPB_ZYMMO (O66113) Pyruvate dehydrogenase E1 component subunit beta (EC|
           1.2.4.1)
          Length = 462

 Score = 32.0 bits (71), Expect = 0.62
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
 Frame = -3

Query: 344 GRWWPATPTSLHIPVKVPYDFLVS--LMKDAGKDWD----LDYEMRVGLTIDLPIVGNFT 183
           G W+ A P    + V  PYD + +  L+K A +  D    L+ E+  G T D+P + +F 
Sbjct: 269 GPWYAAVPG---LVVLAPYDAIDAKGLLKAAIRSDDPVVFLECELLYGKTFDVPKMDDFV 325

Query: 182 LPLTKA 165
           LP+ KA
Sbjct: 326 LPIGKA 331



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>DPOLA_HUMAN (P09884) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
          Length = 1462

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 127  KLTAAPGRAGRSIAT*LCFYFFFFEREXGSSVLTWDH 17
            K T  P  + +S+ T LCFY + F+ E     LT DH
Sbjct: 1376 KATLQPEYSDKSLYTQLCFYRYIFDAECALEKLTTDH 1412



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>DOCK7_HUMAN (Q96N67) Dedicator of cytokinesis protein 7|
          Length = 1542

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 163 PALVSGSVKLPTMGRSMVRPTRIS*SRSQSFPAS 264
           P  + GSV   TM RS VRP  ++ +RS+S   S
Sbjct: 278 PGGLGGSVHYATMARSAVRPASLNLNRSRSLSNS 311



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>Y2594_STRCO (Q9L1I2) Exopolysaccharide phosphotransferase SCO2594 (EC 2.7.-.-)|
           (Stealth protein SCO2594)
          Length = 602

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -1

Query: 397 LPQERRPRSRLRDDAGPGVAGGQRHQPASTYP 302
           LP++R PR+    DAG G AGG R     T P
Sbjct: 245 LPEDRIPRAGEDLDAGDGAAGGPRPGLVRTRP 276


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,069,202
Number of Sequences: 219361
Number of extensions: 835124
Number of successful extensions: 2653
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2652
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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