ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6l20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_470318.1| Oryza sativa (japonica cultivar-group), mRNA 244 3e-61
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 244 3e-61
3gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genom... 244 3e-61
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
5dbj|AK066209.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 3e-61
6ref|XM_477242.1| Oryza sativa (japonica cultivar-group), mRNA 103 8e-19
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 103 8e-19
8dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic D... 103 8e-19
9dbj|AK102293.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 8e-19
10gb|CP000107.1| Ehrlichia canis str. Jake, complete genome 46 0.16
11ref|NM_194699.1| Oryza sativa (japonica cultivar-group) unknown ... 42 2.5
12gb|AC137615.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 2.5
13gb|AC137607.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
14gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
15gb|AC025098.5| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
16gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome 42 2.5
17gb|AC008699.6| Homo sapiens chromosome 5 clone CTB-73D21, comple... 42 2.5
18dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
19dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
20dbj|AK072882.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.5
21gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
22gb|L21975.1|PUMPRHPA Petroselinum crispum homeodomain protein (P... 42 2.5

>ref|XM_470318.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2278

 Score =  244 bits (123), Expect = 3e-61
 Identities = 352/427 (82%), Gaps = 1/427 (0%)
 Strand = Plus / Minus

                                                                        
Query: 308  aagaactgccaccgttgtagcagattggtgtctcttcacaatctgttttgagttgctcgc 367
            ||||||| ||||| |  ||||| |||||||||| | ||||||||||| |||||||||| |
Sbjct: 1870 aagaacttccaccatcatagcaaattggtgtctgtccacaatctgttctgagttgctcac 1811

                                                                        
Query: 368  acgactctggggtcacggagttggaatacccttggatacgtgagcaattccatggatatc 427
            | ||||||||| |||| ||||| ||||| |||| |||| | || |||||||| ||||   
Sbjct: 1810 atgactctgggatcacagagtttgaataaccttcgataagcgaacaattccagggatgca 1751

                                                                        
Query: 428  tggatcgtacgctgagagagacattggagatgcatatgctactgaagttgtcgccctcaa 487
            | ||  |||| ||||| || |||||||| | ||| ||||| ||||||||||| |||||||
Sbjct: 1750 tagactgtacactgagggaaacattggacaggcaaatgctgctgaagttgtccccctcaa 1691

                                                                        
Query: 488  taccctccaagatgccagcaacaccaacatcaatgccaacgacgttctcaattgtaatgt 547
            | || |||||||||||||| ||||||||||  | ||| || || || || |||||||| |
Sbjct: 1690 ttccttccaagatgccagcgacaccaacattgacgccgaccacattttcgattgtaatat 1631

                                                                        
Query: 548  tgcttataatggggagagcatttttgtcatacttgctatcggggtgttcgccgtagtttc 607
            ||||||| || |||||||||||| | ||||| |||  ||| || ||||| ||  ||||||
Sbjct: 1630 tgcttatcattgggagagcatttctatcatatttgtcatcaggatgttcaccaaagtttc 1571

                                                                        
Query: 608  cagtgatcctgatggccatcgagacattgtgcatgctcacatcagctatatacacattcc 667
            | |||||||||||||||||||| ||||||| |||||||||||||| ||| ||||| ||| 
Sbjct: 1570 cggtgatcctgatggccatcgaaacattgtccatgctcacatcagatatgtacacgttct 1511

                                                                        
Query: 668  ttacatatccttccgcgtcctggagcagtcttgattctgatcccatgcaacgagttcaca 727
            | ||||| || ||| || |||||||| ||||||||||||||||| ||||  ||||| || 
Sbjct: 1510 tcacata-ccctccacgccctggagcggtcttgattctgatcccgtgcattgagttgacg 1452

                   
Query: 728  atgcgga 734
            |||||||
Sbjct: 1451 atgcgga 1445



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  244 bits (123), Expect = 3e-61
 Identities = 352/427 (82%), Gaps = 1/427 (0%)
 Strand = Plus / Minus

                                                                            
Query: 308      aagaactgccaccgttgtagcagattggtgtctcttcacaatctgttttgagttgctcgc 367
                ||||||| ||||| |  ||||| |||||||||| | ||||||||||| |||||||||| |
Sbjct: 34737333 aagaacttccaccatcatagcaaattggtgtctgtccacaatctgttctgagttgctcac 34737274

                                                                            
Query: 368      acgactctggggtcacggagttggaatacccttggatacgtgagcaattccatggatatc 427
                | ||||||||| |||| ||||| ||||| |||| |||| | || |||||||| ||||   
Sbjct: 34737273 atgactctgggatcacagagtttgaataaccttcgataagcgaacaattccagggatgca 34737214

                                                                            
Query: 428      tggatcgtacgctgagagagacattggagatgcatatgctactgaagttgtcgccctcaa 487
                | ||  |||| ||||| || |||||||| | ||| ||||| ||||||||||| |||||||
Sbjct: 34737213 tagactgtacactgagggaaacattggacaggcaaatgctgctgaagttgtccccctcaa 34737154

                                                                            
Query: 488      taccctccaagatgccagcaacaccaacatcaatgccaacgacgttctcaattgtaatgt 547
                | || |||||||||||||| ||||||||||  | ||| || || || || |||||||| |
Sbjct: 34737153 ttccttccaagatgccagcgacaccaacattgacgccgaccacattttcgattgtaatat 34737094

                                                                            
Query: 548      tgcttataatggggagagcatttttgtcatacttgctatcggggtgttcgccgtagtttc 607
                ||||||| || |||||||||||| | ||||| |||  ||| || ||||| ||  ||||||
Sbjct: 34737093 tgcttatcattgggagagcatttctatcatatttgtcatcaggatgttcaccaaagtttc 34737034

                                                                            
Query: 608      cagtgatcctgatggccatcgagacattgtgcatgctcacatcagctatatacacattcc 667
                | |||||||||||||||||||| ||||||| |||||||||||||| ||| ||||| ||| 
Sbjct: 34737033 cggtgatcctgatggccatcgaaacattgtccatgctcacatcagatatgtacacgttct 34736974

                                                                            
Query: 668      ttacatatccttccgcgtcctggagcagtcttgattctgatcccatgcaacgagttcaca 727
                | ||||| || ||| || |||||||| ||||||||||||||||| ||||  ||||| || 
Sbjct: 34736973 tcacata-ccctccacgccctggagcggtcttgattctgatcccgtgcattgagttgacg 34736915

                       
Query: 728      atgcgga 734
                |||||||
Sbjct: 34736914 atgcgga 34736908



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>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete
              sequence
          Length = 164352

 Score =  244 bits (123), Expect = 3e-61
 Identities = 352/427 (82%), Gaps = 1/427 (0%)
 Strand = Plus / Plus

                                                                          
Query: 308    aagaactgccaccgttgtagcagattggtgtctcttcacaatctgttttgagttgctcgc 367
              ||||||| ||||| |  ||||| |||||||||| | ||||||||||| |||||||||| |
Sbjct: 125317 aagaacttccaccatcatagcaaattggtgtctgtccacaatctgttctgagttgctcac 125376

                                                                          
Query: 368    acgactctggggtcacggagttggaatacccttggatacgtgagcaattccatggatatc 427
              | ||||||||| |||| ||||| ||||| |||| |||| | || |||||||| ||||   
Sbjct: 125377 atgactctgggatcacagagtttgaataaccttcgataagcgaacaattccagggatgca 125436

                                                                          
Query: 428    tggatcgtacgctgagagagacattggagatgcatatgctactgaagttgtcgccctcaa 487
              | ||  |||| ||||| || |||||||| | ||| ||||| ||||||||||| |||||||
Sbjct: 125437 tagactgtacactgagggaaacattggacaggcaaatgctgctgaagttgtccccctcaa 125496

                                                                          
Query: 488    taccctccaagatgccagcaacaccaacatcaatgccaacgacgttctcaattgtaatgt 547
              | || |||||||||||||| ||||||||||  | ||| || || || || |||||||| |
Sbjct: 125497 ttccttccaagatgccagcgacaccaacattgacgccgaccacattttcgattgtaatat 125556

                                                                          
Query: 548    tgcttataatggggagagcatttttgtcatacttgctatcggggtgttcgccgtagtttc 607
              ||||||| || |||||||||||| | ||||| |||  ||| || ||||| ||  ||||||
Sbjct: 125557 tgcttatcattgggagagcatttctatcatatttgtcatcaggatgttcaccaaagtttc 125616

                                                                          
Query: 608    cagtgatcctgatggccatcgagacattgtgcatgctcacatcagctatatacacattcc 667
              | |||||||||||||||||||| ||||||| |||||||||||||| ||| ||||| ||| 
Sbjct: 125617 cggtgatcctgatggccatcgaaacattgtccatgctcacatcagatatgtacacgttct 125676

                                                                          
Query: 668    ttacatatccttccgcgtcctggagcagtcttgattctgatcccatgcaacgagttcaca 727
              | ||||| || ||| || |||||||| ||||||||||||||||| ||||  ||||| || 
Sbjct: 125677 tcacata-ccctccacgccctggagcggtcttgattctgatcccgtgcattgagttgacg 125735

                     
Query: 728    atgcgga 734
              |||||||
Sbjct: 125736 atgcgga 125742



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  244 bits (123), Expect = 3e-61
 Identities = 352/427 (82%), Gaps = 1/427 (0%)
 Strand = Plus / Minus

                                                                            
Query: 308      aagaactgccaccgttgtagcagattggtgtctcttcacaatctgttttgagttgctcgc 367
                ||||||| ||||| |  ||||| |||||||||| | ||||||||||| |||||||||| |
Sbjct: 34827405 aagaacttccaccatcatagcaaattggtgtctgtccacaatctgttctgagttgctcac 34827346

                                                                            
Query: 368      acgactctggggtcacggagttggaatacccttggatacgtgagcaattccatggatatc 427
                | ||||||||| |||| ||||| ||||| |||| |||| | || |||||||| ||||   
Sbjct: 34827345 atgactctgggatcacagagtttgaataaccttcgataagcgaacaattccagggatgca 34827286

                                                                            
Query: 428      tggatcgtacgctgagagagacattggagatgcatatgctactgaagttgtcgccctcaa 487
                | ||  |||| ||||| || |||||||| | ||| ||||| ||||||||||| |||||||
Sbjct: 34827285 tagactgtacactgagggaaacattggacaggcaaatgctgctgaagttgtccccctcaa 34827226

                                                                            
Query: 488      taccctccaagatgccagcaacaccaacatcaatgccaacgacgttctcaattgtaatgt 547
                | || |||||||||||||| ||||||||||  | ||| || || || || |||||||| |
Sbjct: 34827225 ttccttccaagatgccagcgacaccaacattgacgccgaccacattttcgattgtaatat 34827166

                                                                            
Query: 548      tgcttataatggggagagcatttttgtcatacttgctatcggggtgttcgccgtagtttc 607
                ||||||| || |||||||||||| | ||||| |||  ||| || ||||| ||  ||||||
Sbjct: 34827165 tgcttatcattgggagagcatttctatcatatttgtcatcaggatgttcaccaaagtttc 34827106

                                                                            
Query: 608      cagtgatcctgatggccatcgagacattgtgcatgctcacatcagctatatacacattcc 667
                | |||||||||||||||||||| ||||||| |||||||||||||| ||| ||||| ||| 
Sbjct: 34827105 cggtgatcctgatggccatcgaaacattgtccatgctcacatcagatatgtacacgttct 34827046

                                                                            
Query: 668      ttacatatccttccgcgtcctggagcagtcttgattctgatcccatgcaacgagttcaca 727
                | ||||| || ||| || |||||||| ||||||||||||||||| ||||  ||||| || 
Sbjct: 34827045 tcacata-ccctccacgccctggagcggtcttgattctgatcccgtgcattgagttgacg 34826987

                       
Query: 728      atgcgga 734
                |||||||
Sbjct: 34826986 atgcgga 34826980



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>dbj|AK066209.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058D09, full
            insert sequence
          Length = 2279

 Score =  244 bits (123), Expect = 3e-61
 Identities = 352/427 (82%), Gaps = 1/427 (0%)
 Strand = Plus / Minus

                                                                        
Query: 308  aagaactgccaccgttgtagcagattggtgtctcttcacaatctgttttgagttgctcgc 367
            ||||||| ||||| |  ||||| |||||||||| | ||||||||||| |||||||||| |
Sbjct: 1871 aagaacttccaccatcatagcaaattggtgtctgtccacaatctgttctgagttgctcac 1812

                                                                        
Query: 368  acgactctggggtcacggagttggaatacccttggatacgtgagcaattccatggatatc 427
            | ||||||||| |||| ||||| ||||| |||| |||| | || |||||||| ||||   
Sbjct: 1811 atgactctgggatcacagagtttgaataaccttcgataagcgaacaattccagggatgca 1752

                                                                        
Query: 428  tggatcgtacgctgagagagacattggagatgcatatgctactgaagttgtcgccctcaa 487
            | ||  |||| ||||| || |||||||| | ||| ||||| ||||||||||| |||||||
Sbjct: 1751 tagactgtacactgagggaaacattggacaggcaaatgctgctgaagttgtccccctcaa 1692

                                                                        
Query: 488  taccctccaagatgccagcaacaccaacatcaatgccaacgacgttctcaattgtaatgt 547
            | || |||||||||||||| ||||||||||  | ||| || || || || |||||||| |
Sbjct: 1691 ttccttccaagatgccagcgacaccaacattgacgccgaccacattttcgattgtaatat 1632

                                                                        
Query: 548  tgcttataatggggagagcatttttgtcatacttgctatcggggtgttcgccgtagtttc 607
            ||||||| || |||||||||||| | ||||| |||  ||| || ||||| ||  ||||||
Sbjct: 1631 tgcttatcattgggagagcatttctatcatatttgtcatcaggatgttcaccaaagtttc 1572

                                                                        
Query: 608  cagtgatcctgatggccatcgagacattgtgcatgctcacatcagctatatacacattcc 667
            | |||||||||||||||||||| ||||||| |||||||||||||| ||| ||||| ||| 
Sbjct: 1571 cggtgatcctgatggccatcgaaacattgtccatgctcacatcagatatgtacacgttct 1512

                                                                        
Query: 668  ttacatatccttccgcgtcctggagcagtcttgattctgatcccatgcaacgagttcaca 727
            | ||||| || ||| || |||||||| ||||||||||||||||| ||||  ||||| || 
Sbjct: 1511 tcacata-ccctccacgccctggagcggtcttgattctgatcccgtgcattgagttgacg 1453

                   
Query: 728  atgcgga 734
            |||||||
Sbjct: 1452 atgcgga 1446



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>ref|XM_477242.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1797

 Score =  103 bits (52), Expect = 8e-19
 Identities = 113/132 (85%), Gaps = 1/132 (0%)
 Strand = Plus / Minus

                                                                        
Query: 592  tgttcgccgtagtttccagtgatcctgatggccatcgagacattgtgcatgctcacatca 651
            ||||| || ||||||||||||||||||||||| || |||||||||| |||||||||||||
Sbjct: 1219 tgttccccatagtttccagtgatcctgatggctattgagacattgtccatgctcacatca 1160

                                                                        
Query: 652  gctatatacacattccttacatatccttccgcgtcctggagcagtcttgattctgatccc 711
            ||||| || |  ||  | ||||| ||  ||||| ||||| ||||||||||||||||| ||
Sbjct: 1159 gctatgtatatgtttttcacata-cccaccgcgccctggggcagtcttgattctgattcc 1101

                        
Query: 712  atgcaacgagtt 723
            ||||| ||||||
Sbjct: 1100 atgcaccgagtt 1089



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  103 bits (52), Expect = 8e-19
 Identities = 113/132 (85%), Gaps = 1/132 (0%)
 Strand = Plus / Plus

                                                                           
Query: 592     tgttcgccgtagtttccagtgatcctgatggccatcgagacattgtgcatgctcacatca 651
               ||||| || ||||||||||||||||||||||| || |||||||||| |||||||||||||
Sbjct: 8111710 tgttccccatagtttccagtgatcctgatggctattgagacattgtccatgctcacatca 8111769

                                                                           
Query: 652     gctatatacacattccttacatatccttccgcgtcctggagcagtcttgattctgatccc 711
               ||||| || |  ||  | ||||| ||  ||||| ||||| ||||||||||||||||| ||
Sbjct: 8111770 gctatgtatatgtttttcacata-cccaccgcgccctggggcagtcttgattctgattcc 8111828

                           
Query: 712     atgcaacgagtt 723
               ||||| ||||||
Sbjct: 8111829 atgcaccgagtt 8111840



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>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_C08
          Length = 117923

 Score =  103 bits (52), Expect = 8e-19
 Identities = 113/132 (85%), Gaps = 1/132 (0%)
 Strand = Plus / Plus

                                                                         
Query: 592   tgttcgccgtagtttccagtgatcctgatggccatcgagacattgtgcatgctcacatca 651
             ||||| || ||||||||||||||||||||||| || |||||||||| |||||||||||||
Sbjct: 45482 tgttccccatagtttccagtgatcctgatggctattgagacattgtccatgctcacatca 45541

                                                                         
Query: 652   gctatatacacattccttacatatccttccgcgtcctggagcagtcttgattctgatccc 711
             ||||| || |  ||  | ||||| ||  ||||| ||||| ||||||||||||||||| ||
Sbjct: 45542 gctatgtatatgtttttcacata-cccaccgcgccctggggcagtcttgattctgattcc 45600

                         
Query: 712   atgcaacgagtt 723
             ||||| ||||||
Sbjct: 45601 atgcaccgagtt 45612



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>dbj|AK102293.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089L01, full
            insert sequence
          Length = 1798

 Score =  103 bits (52), Expect = 8e-19
 Identities = 113/132 (85%), Gaps = 1/132 (0%)
 Strand = Plus / Minus

                                                                        
Query: 592  tgttcgccgtagtttccagtgatcctgatggccatcgagacattgtgcatgctcacatca 651
            ||||| || ||||||||||||||||||||||| || |||||||||| |||||||||||||
Sbjct: 1220 tgttccccatagtttccagtgatcctgatggctattgagacattgtccatgctcacatca 1161

                                                                        
Query: 652  gctatatacacattccttacatatccttccgcgtcctggagcagtcttgattctgatccc 711
            ||||| || |  ||  | ||||| ||  ||||| ||||| ||||||||||||||||| ||
Sbjct: 1160 gctatgtatatgtttttcacata-cccaccgcgccctggggcagtcttgattctgattcc 1102

                        
Query: 712  atgcaacgagtt 723
            ||||| ||||||
Sbjct: 1101 atgcaccgagtt 1090



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>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 231    gaacatatgcagtaaagaattta 253
              |||||||||||||||||||||||
Sbjct: 925651 gaacatatgcagtaaagaattta 925673



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>ref|NM_194699.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBa0020E23.16), mRNA
          Length = 2445

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 494  ccaagatgccagcaacaccaa 514
            |||||||||||||||||||||
Sbjct: 1779 ccaagatgccagcaacaccaa 1759



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>gb|AC137615.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0053F13, from chromosome 5, complete sequence
          Length = 149538

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 494    ccaagatgccagcaacaccaa 514
              |||||||||||||||||||||
Sbjct: 143151 ccaagatgccagcaacaccaa 143131



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>gb|AC137607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0006O14, complete sequence
          Length = 142764

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 494   ccaagatgccagcaacaccaa 514
             |||||||||||||||||||||
Sbjct: 26622 ccaagatgccagcaacaccaa 26602



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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 494     ccaagatgccagcaacaccaa 514
               |||||||||||||||||||||
Sbjct: 1713038 ccaagatgccagcaacaccaa 1713058



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>gb|AC025098.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0020E23,
              complete sequence
          Length = 151359

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 494    ccaagatgccagcaacaccaa 514
              |||||||||||||||||||||
Sbjct: 110135 ccaagatgccagcaacaccaa 110155



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>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome
          Length = 1176248

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 231    gaacatatgcagtaaagaatt 251
              |||||||||||||||||||||
Sbjct: 341365 gaacatatgcagtaaagaatt 341345



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>gb|AC008699.6| Homo sapiens chromosome 5 clone CTB-73D21, complete sequence
          Length = 169349

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 84     ggttcagagctatatacatga 104
              |||||||||||||||||||||
Sbjct: 116449 ggttcagagctatatacatga 116469



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 494     ccaagatgccagcaacaccaa 514
               |||||||||||||||||||||
Sbjct: 1713038 ccaagatgccagcaacaccaa 1713058



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 494      ccaagatgccagcaacaccaa 514
                |||||||||||||||||||||
Sbjct: 10243057 ccaagatgccagcaacaccaa 10243037



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>dbj|AK072882.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149K11, full
            insert sequence
          Length = 2633

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 494  ccaagatgccagcaacaccaa 514
            |||||||||||||||||||||
Sbjct: 1860 ccaagatgccagcaacaccaa 1840



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 494     ccaagatgccagcaacaccaa 514
               |||||||||||||||||||||
Sbjct: 1712989 ccaagatgccagcaacaccaa 1713009



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>gb|L21975.1|PUMPRHPA Petroselinum crispum homeodomain protein (PRHP) mRNA, complete cds
          Length = 4104

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 698 ttgattctgatcccatgcaac 718
           |||||||||||||||||||||
Sbjct: 406 ttgattctgatcccatgcaac 426


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,372,013
Number of Sequences: 3902068
Number of extensions: 5372013
Number of successful extensions: 110435
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110144
Number of HSP's gapped (non-prelim): 276
length of query: 734
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 711
effective length of database: 17,143,297,704
effective search space: 12188884667544
effective search space used: 12188884667544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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